cluster # 7874

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Oryza sativa
cluster # 7874 cluster # 7874 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7874#0 length = 1972 sequences # 5
consensusID : consensus_7874#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1972
fasta sequence
                              [CTAATTTCAAATCTCCCCCATTCGTTGCTTCTCCTCTCCGCTACCCCCGAACAAATCTAGGGTTTCGGATCGGAATCCTCCACCGCCGCCGGCGTTACTACCGGCGATAATGTCGGCCAGCGGCGAGCCCGAGAAGGTCCCCGCCGCCGCCGAGGGAGAGGAGAAGGCGGACGGCGCGAAGGATGCCGCGGGCTCCGGGGGAGAGCTGCTGTACTGCGGCGCGACCAACTTCGAGACCATGGGGCGGAAGGTGGTGGGCGGGGCGCAGGGTAACCTAGTGTCGCCGACGCGGATGCGGTCGCTCATGGGCGTCGACATACGATTCGTTGCCTCCGGGTGCACGGCTTGCCATTGTGTTGCCTTGGATGCTGAAGGACGTTGCTATACATGGGGTCGAAATGAGAAGGGGCAGTTGGGGCATGGGGATACTCTTCAGCGTAACCTGCCGACTGTTGTTTCTGAACTATCAAAGTACAAAGTCATTAAAGCAAGTGTTGGAAGAAATCACACAGTGGTTGTAACCGATGACGGGAAGTCATTCTCATTTGGTCACAATAAACACGGACAGTTGGGTACAGGCTCCCTAAGGAATGAAATTGAGACATCACCAATGCCCTGTCTTGTTACTGAAGCAACTAATGCTGTTTGTGGTGCTGATTTTACTGTCTGGCTGTCATCAGTGGAGGGCTCTACTATACTTACAGCAGGTCTTCCCCAGTACGGTCAGCTTGGTCATGGAACCGACAATGAGTACAATATTAAAGACTCATCTGTAAAGCTGGCATATGATCCCCAGCCCCGTCCCAGGGCAATAGCTTCATTATCTGGGAAAACTATCGTCAAAGCTGCATGTGGAACAAATCATACAGTTGCAGTTGATTCAAGTGGCTATGTTTACACATGGGGCTTTGGTGGATATGGAAGGTTGGGCCATAGAGAACAAAAGGATGAGTGGCAGCCTCGCCTTGTTGAAGTCTTCCAGAAGCATAATGTTCTGCCACCCAATGCTATTATATCAGCTGGTGCGGCAAGTTCTGCATGCACTGCCGGTGGAGGACAGTTGTACATGTGGGGAAAGTTAAAGAATACAGGCGACGACTGGATGTATCCAAAGCCATTATTGGATTTAAGTGGTTGGAACATTCGTTGCATGGCTTCTGGTAACATGCACCACGTTGTTGGTGCAGATGATTCTTGCATAAGCTGGGGAACAGCCCAAAATGGAGAGCTTGGCTATGGCCCTAATGGGCAAAAGTCATCTGCTAATCCTAAAAAGGTTGACATCCTTGAAGGAATGCATGTTATAAGTGTTGGTTGTGGATATGGGTTGTCTGCGATTGTTGTAGACAGATCAATTGCTAGTGACCGGCTTAATCAGCTGGATATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAGGTCCAGGTTGCCAAGAAGGCATCTGCTAGCACCAATGCACGATCTAACAAGCGCAAGAAAACCAAGGATGTTTCCGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGATGAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGG-CCGCAAACC-TTCAAACAGAGGGAGAGGCAGGGGAGCTAAAAAGGCAACTCCTGAGCCAAAGCCATCTGCAAGGGGCAGAGGCCGCCCGAAGAAAACCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAGAGGGGGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGATTGTCTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTCTTAGCAATGGTTTCTTACTCTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCTGGTATTGAAGACTTGTCTGATTTGAACCTGAAAAGCTCTGTTTNGTTAAAAA]

[+] EMBL AK102939             [CTAATTTCAAATCTCCCCCATTCGTTGCTTCTCCTCTCCGCTACCCCCGAACAAATCTAGGGTTTCGGATCGGAATCCTCCACCGCCGCCGGCGTTACTACCGGCGATAATGTCGGCCAGCGGCGAGCCCGAGAAGGTCCCCGCCGCCGCCGAGGGAGAGGAGAAGGCGGACGGCGCGAAGGATGCCGCGGGCTCCGGGGGAGAGCTGCTGTACTGCGGCGCGACCAACTTCGAGACCATGGGGCGGAAGGTGGTGGGCGGGGCGCAGGGTAACCTAGTGTCGCCGACGCGGATGCGGTCGCTCATGGGCGTCGACATACGATTCGTTGCCTCCGGGTGCACGGCTTGCCATTGTGTTGCCTTGGATGCTGAAGGACGTTGCTATACATGGGGTCGAAATGAGAAGGGGCAGTTGGGGCATGGGGATACTCTTCAGCGTAACCTGCCGACTGTTGTTTCTGAACTATCAAAGTACAAAGTCATTAAAGCAAGTGTTGGAAGAAATCACACAGTGGTTGTAACCGATGACGGGAAGTCATTCTCATTTGGTCACAATAAACACGGACAGTTGGGTACAGGCTCCCTAAGGAATGAAATTGAGACATCACCAATGCCCTGTCTTGTTACTGAAGCAACTAATGCTGTTTGTGGTGCTGATTTTACTGTCTGGCTGTCATCAGTGGAGGGCTCTACTATACTTACAGCAGGTCTTCCCCAGTACGGTCAGCTTGGTCATGGAACCGACAATGAGTACAATATTAAAGACTCATCTGTAAAGCTGGCATATGATCCCCAGCCCCGTCCCAGGGCAATAGCTTCATTATCTGGGAAAACTATCGTCAAAGCTGCATGTGGAACAAATCATACAGTTGCAGTTGATTCAAGTGGCTATGTTTACACATGGGGCTTTGGTGGATATGGAAGGTTGGGCCATAGAGAACAAAAGGATGAGTGGCAGCCTCGCCTTGTTGAAGTCTTCCAGAAGCATAATGTTCTGCCACCCAATGCTATTATATCAGCTGGTGCGGCAAGTTCTGCATGCACTGCCGGTGGAGGACAGTTGTACATGTGGGGAAAGTTAAAGAATACAGGCGACGACTGGATGTATCCAAAGCCATTATTGGATTTAAGTGGTTGGAACATTCGTTGCATGGCTTCTGGTAACATGCACCACGTTGTTGGTGCAGATGATTCTTGCATAAGCTGGGGAACAGCCCAAAATGGAGAGCTTGGCTATGGCCCTAATGGGCAAAAGTCATCTGCTAATCCTAAAAAGGTTGACATCCTTGAAGGAATGCATGTTATAAGTGTTGGTTGTGGATATGGGTTGTCTGCGATTGTTGTAGACAGATCAATTGCTAGTGACCGGCTTAATCAGCTGGATATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAGGTCCAGGTTGCCAAGAAGGCATCTGCTAGCACCAATGCACGATCTAACAAGCGCAAGAAAACCAAGGATGTTT CGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGATGAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGG CCGCAAACC TTCAAACAGAGGGAGAGGCAGGGGAGCTAAAAAGGCAACTCCTGAGCCAAAGCCATCTGCAAGGGGCAGAGGCCGCCCGAAGAAAACCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAGAGGGGGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGATTGTCTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTCTTAGCAATGGTTTCTTACTCTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCTGGTATTGAAGACTTGTCTGA                                ]
[+] EMBL AU030497             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAAGCAACTAATGCTGTTTGTGGTGCTGATTTTACTGTCTGGCTGTCATCAGTGGAGGGCTCTACTATACTTACAGCAGGTCTTCCCCAGTACGGTCAGCTTGGTCATGGAACCGACAATGAGTACAATATTAAAGACTCATCTGTAAAGCTGGCATATGATCCCCAGCCCCGTCCCAGGGCAATAGCTTCATTATCTGGGAAAACTATCGTCAAAGCTGCATGTGGGACAAATCATACAGTTGCAG TGANTC AGTGGC ATGTTTACACNTGGGGtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB681581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTAATCAGCTGGATATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAGGTCCAGGTTGCCAAGAAGGCATTTGCTAGCACCAATGCACGATTTAACAAGCGCAAGAAAACCAAGGATGTTTCCGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGATGAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGG CCGCAAACC TTCAAACAGAGGGAGAGGCAGGGGAGCTAAAAAGGCAACTCCTGAGCCAAAGCCATTTGCAAGGGGCAGAGGCCGCCCGAAGAAAACCGAGTTTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAGAGGGGGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGATTGTTTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTTTTAGCAATGGTTTTTTACTTTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCTGGTATAAAGGGCTTG                                     ]
[+] EMBL CB681580             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGGACATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAGGTCCAGGTTGCCAAGAAGGCATCTGCTAGCACCAATGCACGATCTAACAAGCGCAAGAAAACCAAGGATGTTTCCGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGATGAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGG CCGCAAACC TTCAAACAGAGGGAGAGGCAGGGGAGCTAAAAAGGCAACTCCTGAGCCAAAGCCATCTGCAAGGGGCAGAGGCCGCCCGAAGAAAACCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAGAGGGGGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGATTGTCTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTCTTAGCAATGGTTTCTTACTCTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCTGGTATTGAAGACTT                                      ]
[+] EMBL AU030498             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GATGAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGGCCCGCAAACCTTTCAAACAGAGGGAGAGNCAGGGGAGCTAAAAAGGCAACTCCTGANCCAAAGCCATCTGCAAGGGGCAGAGCCCNCCCGAAGAAANCCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGNCGAGNCGGGAAGAGGGGGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGATTGTCTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTCTTAGCAATGGTTTCTTACTCTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCTGGTATTGAAGACTTGTCTGATTTGAACCTGAAAAGCTCTGTTTNGTTAAAAA]




>consensus_7874#0
CTAATTTCAAATCTCCCCCATTCGTTGCTTCTCCTCTCCGCTACCCCCGAACAAATCTAG
GGTTTCGGATCGGAATCCTCCACCGCCGCCGGCGTTACTACCGGCGATAATGTCGGCCAG
CGGCGAGCCCGAGAAGGTCCCCGCCGCCGCCGAGGGAGAGGAGAAGGCGGACGGCGCGAA
GGATGCCGCGGGCTCCGGGGGAGAGCTGCTGTACTGCGGCGCGACCAACTTCGAGACCAT
GGGGCGGAAGGTGGTGGGCGGGGCGCAGGGTAACCTAGTGTCGCCGACGCGGATGCGGTC
GCTCATGGGCGTCGACATACGATTCGTTGCCTCCGGGTGCACGGCTTGCCATTGTGTTGC
CTTGGATGCTGAAGGACGTTGCTATACATGGGGTCGAAATGAGAAGGGGCAGTTGGGGCA
TGGGGATACTCTTCAGCGTAACCTGCCGACTGTTGTTTCTGAACTATCAAAGTACAAAGT
CATTAAAGCAAGTGTTGGAAGAAATCACACAGTGGTTGTAACCGATGACGGGAAGTCATT
CTCATTTGGTCACAATAAACACGGACAGTTGGGTACAGGCTCCCTAAGGAATGAAATTGA
GACATCACCAATGCCCTGTCTTGTTACTGAAGCAACTAATGCTGTTTGTGGTGCTGATTT
TACTGTCTGGCTGTCATCAGTGGAGGGCTCTACTATACTTACAGCAGGTCTTCCCCAGTA
CGGTCAGCTTGGTCATGGAACCGACAATGAGTACAATATTAAAGACTCATCTGTAAAGCT
GGCATATGATCCCCAGCCCCGTCCCAGGGCAATAGCTTCATTATCTGGGAAAACTATCGT
CAAAGCTGCATGTGGAACAAATCATACAGTTGCAGTTGATTCAAGTGGCTATGTTTACAC
ATGGGGCTTTGGTGGATATGGAAGGTTGGGCCATAGAGAACAAAAGGATGAGTGGCAGCC
TCGCCTTGTTGAAGTCTTCCAGAAGCATAATGTTCTGCCACCCAATGCTATTATATCAGC
TGGTGCGGCAAGTTCTGCATGCACTGCCGGTGGAGGACAGTTGTACATGTGGGGAAAGTT
AAAGAATACAGGCGACGACTGGATGTATCCAAAGCCATTATTGGATTTAAGTGGTTGGAA
CATTCGTTGCATGGCTTCTGGTAACATGCACCACGTTGTTGGTGCAGATGATTCTTGCAT
AAGCTGGGGAACAGCCCAAAATGGAGAGCTTGGCTATGGCCCTAATGGGCAAAAGTCATC
TGCTAATCCTAAAAAGGTTGACATCCTTGAAGGAATGCATGTTATAAGTGTTGGTTGTGG
ATATGGGTTGTCTGCGATTGTTGTAGACAGATCAATTGCTAGTGACCGGCTTAATCAGCT
GGATATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAGGTCCAGGTTGC
CAAGAAGGCATCTGCTAGCACCAATGCACGATCTAACAAGCGCAAGAAAACCAAGGATGT
TTCCGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGATGAAAATGGTGA
AATAAAAGGTGGTAAGGGTAGACGTGGCCGCAAACCTTCAAACAGAGGGAGAGGCAGGGG
AGCTAAAAAGGCAACTCCTGAGCCAAAGCCATCTGCAAGGGGCAGAGGCCGCCCGAAGAA
AACCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAGAGGGGGAAGCG
AGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGA
TTGTCTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTCTTAGCAAT
GGTTTCTTACTCTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCT
GGTATTGAAGACTTGTCTGATTTGAACCTGAAAAGCTCTGTTTNGTTAAAAA
clustalw multiple alignements is not computed in this case