These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7877#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2248 fasta sequence [CCGTTGACAGTCACCCCAATCATCACAGTTTATCCCCTCTCTCGTGCTTCAAAAAAAAAAAAGAAAAAAAGAAATAAAG-AAAAAAAAAGTGACCGCCGGTCTTCTCCCCCGCCTCGCCGCCGCGCGCACGCAGCCGCCGGCGAACTGGCCCCGGAGGCGCCTCTTCCTTCCCAACCCCGCCCTAGCCCTTCTCCCCTGCTCGGCCTCCTCGCGCGCACGGCCGGTCGCTGGGTTTGGAGCCAGCCAGGGGGGCCGATGCTGCCGCCTGCCGCCTCCTCGTTCGCATCGATTCCAAGCTTGTAGGTAGCACTTCTAAACAGTAAGGAGATTTTGAGCTTCCCATAGGAAGGGCATTTTATAAACTGGGCAGCAGACATGTCAGGCATCGATGGTAACAAACCACCTTCAGAGGTTTTGATTGATGAGAATGATGACTGGGTGATAGTCAAGAAGCAGCGAATCACCATCCTGATCCCTCCACCATCACCTGCAGCTGCAAGTCTTCAGGATGATATGCAAAAAATAAGTTCTGAACAAGCTTGTATAGCCAAAAAGAGCATGGAAAACTGTGATGCTGCAAGAAAGAAGCATCCAAAGCAGATGACAACCAACAAAGCTCAGGAGCCACTTCTAGAGGGCATCAAAGTTTCTGCCAACATCAAGAAAGCTCAAGAAATTGCTACATCTTCTCACCATCCTGTTGCCCCTGTTGTTAAAGCAAACCATGCTTCCATCCAAGGACTGTTTCATGAGAATATTGAGAAAGCAGGAAATTCGTTTGGAAACATTTATAAGGAAGAGCTGCCAGTTATTTCTTCCCAAGTTACGAATAGGATAATGCGAGCACGACTTCTCGAGAGACGGGTTGCTGGATTTGGTGGGCTGAAGAATTGGCTTTTCACTTGTGGTTTCGGATGGTTCGTCGACATACTGGACAGTGAAAAGCTGGGGATGTATCAGATAGTTTCCCTTACAATGAACCAGCTAAAAGATATGGGTCTTGATGCTGTAGGTCCACGGAGGAAATTGATCCATGCCATTGAGTGTGTTTCCCAGCCCAACGAATTTGAGATGTTTTCTTGATCTCAAGCGTCTAATCAGTTCATTATAAACCACTGCTACTATATTTGAGAGGAATGCCTGCAGTAGTCAGAGTTCAGGATCTATTTTGACCTGGCTGAAAATGACACCAGTTCTGGGGGTTTTGGAAGTAGAAAATTAGAAGCAACAGACAGTTCGACCTATATTAGAAAATGCTTATGAGATGATCCCTGTAAAAATATTTTGCATCTGAGATGTTCAGTTGCACTACTATTTTGCATGAGAGTTCTTTAATGGAATTGCTAACTTCAT-GCGACAGAAATTAAGGGGGATTTCTATCGAATTTTGGACCGCTAGATCCGTGCTAAAATTCGTGCCAACCTCCTCCATCTTAGGTGAATCGAGGCAGCTCTGGGGAGGTGGCAGTGGCCCTGAACAGTTAGGGTTTTGGGCTGCGGTCAAGGTGGGAGGGGGATGGGGAAGGGGGAAGAGAGATGTTTTCTCATGGTTTAGAGGGATGGCCGTGGGCGGCGAAGGTCTGGTAGTGTGTGGTGGACTCGTTGGCCGGTGGAGGGTGGACCTCCAGCAGGGTGCAATGGACTTGGGCGGCTGGCGGAGGAACGCTGTTCGTGCCAACTGGCTTGCCGGTGAGGCACCGAGGCCAGGCAGCGGCGTGCTGGAGGAGGCGAGCGTGGCGCTTGTGCGTGCGTGCGGCGAGAAAAAGGATATGATCACTGTTGTGCACGGATCTTAAAGCTAATCGAATGATAATGTTGTGCATGGTGGAGGGTGGACCTCCAGCAGGGTGCGGTGGACTTGGGTGGCTGGCGGAGGAACGTTGTTCGCGCCATCTGGCCTGCCGGTGAGGCGCCGAGGCCAGGCGGTGGCGTGCTGGAGGAGGCGAGTGTGGCGCTCGTGCGTGCGTGCGGCGAGAAAAAGGATATGATCACTGTTGTGCATGGATTTTAAAGCTAATCGAATGAAAATGTTGTACATGGATCTTAAAGCTAATCGAATGATAAAAAGTTTGCATGACACAGGGCGGGATTTTCTGTCACAAGTTGTGTAGATTTTTTAGATAATGGATTTAAATAAAATCTGGCCTCTATATCCCAAGAGATGTATACAGCCATAAGTTCTGTAGATAGTCCCGTTCGTTGAAGATATGGGCTCTGTTTGGAAGCTAGATACTGCAGCTGGACAACAG] [+] EMBL AK073371 [CCGTTGACAGTCACCCCAATCATCACAGTTTATCCCCTCTCTCGTGCTTCAAAAAAAAAAAAGAAAAAAAGAAATAAAG AAAAAAAAAGTGACCGCCGGTCTTCTCCCCCGCCTCGCCGCCGCGCGCACGCAGCCGCCGGCGAACTGGCCCCGGAGGCGCCTCTTCCTTCCCAACCCCGCCCTAGCCCTTCTCCCCTGCTCGGCCTCCTCGCGCGCACGGCCGGTCGCTGGGTTTGGAGCCAGCCAGGGGGGCCGATGCTGCCGCCTGCCGCCTCCTCGTTCGCATCGATTCCAAGCTTGTAGGTAGCACTTCTAAACAGTAAGGAGATTTTGAGCTTCCCATAGGAAGGGCATTTTATAAACTGGGCAGCAGACATGTCAGGCATCGATGGTAACAAACCACCTTCAGAGGTTTTGATTGATGAGAATGATGACTGGGTGATAGTCAAGAAGCAGCGAATCACCATCCTGATCCCTCCACCATCACCTGCAGCTGCAAGTCTTCAGGATGATATGCAAAAAATAAGTTCTGAACAAGCTTGTATAGCCAAAAAGAGCATGGAAAACTGTGATGCTGCAAGAAAGAAGCATCCAAAGCAGATGACAACCAACAAAGCTCAGGAGCCACTTCTAGAGGGCATCAAAGTTTCTGCCAACATCAAGAAAGCTCAAGAAATTGCTACATCTTCTCACCATCCTGTTGCCCCTGTTGTTAAAGCAAACCATGCTTCCATCCAAGGACTGTTTCATGAGAATATTGAGAAAGCAGGAAATTCGTTTGGAAACATTTATAAGGAAGAGCTGCCAGTTATTTCTTCCCAAGTTACGAATAGGATAATGCGAGCACGACTTCTCGAGAGACGGGTTGCTGGATTTGGTGGGCTGAAGAATTGGCTTTTCACTTGTGGTTTCGGATGGTTCGTCGACATACTGGACAGTGAAAAGCTGGGGATGTATCAGATAGTTTCCCTTACAATGAACCAGCTAAAAGATATGGGTCTTGATGCTGTAGGTCCACGGAGGAAATTGATCCATGCCATTGAGTGTGTTTCCCAGCCCAACGAATTTGAGATGTTTTCTTGATCTCAAGCGTCTAATCAGTTCATTATAAACCACTGCTACTATATTTGAGAGGAATGCCTGCAGTAGTCAGAGTTCAGGATCTATTTTGACCTGGCTGAAAATGACACCAGTTCTGGGGGTTTTGGAAGTAGAAAATTAGAAGCAACAGACAGTTCGACCTATATTAGAAAATGCTTATGAGATGATCCCTGTAAAAATATTTTGCATCTGAGATGTTCAGTTGCACTACTATTTTGCATGAGAGTTCTTTAA ] [+] EMBL AK069952 [ CCCTCTCTCGTGCTTCAAAAAAAAAAAAGAAAAAAAGAAATAAAGAAAAAAAAAAGTGACCGCCGGTCTTCTCCCCCGCCTCGCCGCCGCGCGCACGCAGCCGCCGGCGAACTGGCCCCGGAGGCGCCTCTTCCTTCCCAACCCCGCCCTAGCCCTTCTCCCCTGCTCGGCCTCCTCGCGCGCACGGCCGGTCGCTGGGTTTGGAGCCAGCCAGGGGGGCCGATGCTGCCGCCTGCCGCCTCCTCGTTCGCATCGATTCCAAGCTTGTAGGTAGCACTTCTAAACAGTAAGGAGATTTTGAGCTTCCCATAGGAAGGGCATTTTATAAACTGGGCAGCAGACATGTCAGGCATCGATGGTAACAAACCACCTTCAGAGGTTTTGATTGATGAGAATGATGACTGGGTGATAGTCAAGAAGCAGCGAATCACCATCCTGATCCCTCCACCATCACCTGCAGCTGCAAGTCTTCAGGATGATATGCAAAAAATAAGTTCTGAACAAGCTTGTATAGCCAAAAAGAGCATGGAAAACTGTGATGCTGCAAGAAAGAAGCATCCAAAGCAGATGACAACCAACAAAGCTCAGGAGCCACTTCTAGAGGGCATCAAAGTTTCTGCCAACATCAAGAAAGCTCAAGAAATTGCTACATCTTCTCACCATCCTGTTGCCCCTGTTGTTAAAGCAAACCATGCTTCCATCCAAGGACTGTTTCATGAGAATATTGAGAAAGCAGGAAATTCGTTTGGAAACATTTATAAGGAAGAGCTGCCAGTTATTTCTTCCCAAGTTACGAATAGGATAATGCGAGCACGACTTCTCGAGAGACGGGTTGCTGGATTTGGTGGGCTGAAGAATTGGCTTTTCACTTGTGGTTTCGGATGGTTCGTCGACATACTGGACAGTGAAAAGCTGGGGATGTATCAGATAGTTTCCCTTACAATGAACCAGCTAAAAGATATGGGTCTTGATGCTGTAGGTCCACGGAGGAAATTGATCCATGCCATTGAGTGTGTTTCCCAGCCCAACGAATTTGAGATGTTTTCTTGATCTCAAGCGTCTAATCAGTTCATTATAAACCACTGCTACTATATTTGAGAGGAATGCCTGCAGTAGTCAGAGTTCAGCATCTATTTTGACCTGGCTGAAAATGACACCAGTTCTGGGGGTTTTGGAAGTAGAAAATTAGAAGCAACAGACAGTTCGACCTATATTAGAAAATGCTTATGAGATGATCCCTGTAAAAATATTTTGCATCTGAGATGTTCAGTTGCACTACTATTTTGCATGAGAGTTCTTTAATGGAATTGCTAACTTCAT GCGACAGAAATTAAGGGGGATTTCTATCGAATTTTGGACCGCTAGATCCGTGCTAAAATTCGTGCCAACCTCCTCCATCTTAGGTGAATCGAGGCAGCTCTGGGGAGGTGGCAGTGGCCCTGAACAGTTAGGGTTTTGGGCTGCGGTCAAGGTGGGAGGGGGATGGGGAAGGGGGAAGAGAGATGTTTTCTCATGGTTTAGAGGGATGGCCGTGGGCGGCGAAGGTCTGGTAGTGTGTGGTGGACTCGTTGGCCGGTGGAGGGTGGACCTCCAGCAGGGTGCAATGGACTTGGGCGGCTGGCGGAGGAACGCTGTTCGTGCCAACTGGCTTGCCGGTGAGGCACCGAGGCCAGGCAGCGGCGTGCTGGAGGAGGCGAGCGTGGCGCTTGTGCGTGCGTGCGGCGAGAAAAAGGATATGATCACTGTTGTGCACGGATCTTAAAGCTAATCGAATGATAATGTTGTGCATGGTGGAGGGTGGACCTCCAGCAGGGTGCGGTGGACTTGGGTGGCTGGCGGAGGAACGTTGTTCGCGCCATCTGGCCTGCCGGTGAGGCGCCGAGGCCAGGCGGTGGCGTGCTGGAGGAGGCGAGTGTGGCGCTCGTGCGTGCGTGCGGCGAGAAAAAGGATATGATCACTGTTGTGCATGGATTTTAAAGCTAATCGAATGAAAATGTTGTACATGGATCTTAAAGCTAATCGAATGATAAAAAGTTTGCATGACACAGGGCGGGATTTTCTGTCACAAGTTGTGTAGATTTTTTAGATAATGGATTTAAATAAAATCTGGCCTCTATATCCCAAGAGATGTATACAGCCATAAGTTCTGTAGATAGTCCCGTTCGTTGAAGATATGGGCTCTGTTTGGAAGCTAGATACTGCAGCTGGACAACAG] [+] EMBL CB661894 [ ACCGCCGGTCTTCTCCCCCGCCTCGCCGCCGCGCGCACGCAGCCGCCGGCGAACTGGCCCCGGAGGCGCCTCTTCCTTCCCAACCCCGCCCTAGCCCTTCTCCCCTGCTCGGCCTCCTCGCGCGCACGGCCGGTCGCTGGGTTTGGAGCCAGCCAGGGGGGCCGATGCTGCCGCCTGCCGCCTCCTCGTTCGCATCGATTCCAAGCTTGTAGGTAGCACTTCTAAACAGTAAGGAGATTTTGAGCTTCCCATAGGAAGGGCATTTTATAAACTGGGCAGCAGACATGTCAGGCATCGATGGTAACAAACCACCTTCAGAGGTTTTGATTGATGAGAATGATGACTGGGTGATAGTCAAGAAGCAGCGAATCACCATCCTGATCCCTCCACCATCACCTGCAGCTGCAAGTCTTCAGGATGATATGCAAAAAATAAGTTCTGAACAAGCTTGTATAGCCAAAAAGAGCATGGAAAACTGTGATGCTGCAAGAAAGAAGCATCCAAAGCAGATGACAACCAACAAAGCTCAGGAGCCACTTCTAGAGGGCATCAAAGTTTCTGCCAACATCAAGAAAGCTCAAGAAATTGCTACATCTTCTCACCATCCTGTTGCCCCTGTTGTTAAAGCAAACCATGCTTCCATCCAAGGACTGTTTCATGAGAATATTGAGAAAGCAGGAAATTCGTTTGGAAACATTTATAAGGAAGAGCTGCCAGTTATTTCTTCCCAAGTTACGAATAGG ] [-] EMBL CB661895 [ GCATCCAAAGCAGATGACAACCAACAAAGCTCAGGAGCCACTTCTAGAGGGCATCAAAGTTTCTGCCAACATCAAGAAAGCTCAAGAAATTGCTACATCTTCTCACCATCCTGTTGCCCCTGTTGTTAAAGCAAACCATGCTTCCATCCAAGGACTGTTTCATGAGAATATTGAGAAAGCAGGAAATTCGTTTGGAAACATTTATAAGGAAGAGCTGCCAGTTATTTCTTCCCAAGTTACGAATAGGATAATGCGAGCACGACTTCTCGAGAGACGGGTTGCTGGATTTGGTGGGCTGAAGAATTGGCTTTTCACTTGTGGTTTCGGATGGTTCGTCGACATACTGGACAGTGAAAAGCTGGGGATGTATCAGATAGTTTCCCTTACAATGAACCAGCTAAAAGATATGGGTCTTGATGCTGTAGGTCCACGGAGGAAATTGATCCATGCCATTGAGTGTGTTTCCCAGCCCAACGAATTTGAGATGTTTTCTTGATCTCAAGCGTCTAATCAGTTCATTATAAACCACTGCTACTATATTTGAGAGGAATGCCTGCAGTAGTCAGAGTTCAGGATCTATTTTGACCTGGCTGAAAATGACACCAGTTCTGGGGGTTTTGGAAGTAGAAAATTAGAAGCAACAGACAGTTCGACCTATATTAGAAAATGCTTATGAGATGATCCCTGTAAAAATATTTTGCATCTGAGATGTTCAGTTGCACTACTATTTTGCATGAGAGTTCTTGAATGGAATTGCTAACTTC ] [+] EMBL AU095399 [ gagtaCCACGGAGGAAATTGATCCATGCCATTGAGTGTGTTTCCCAGCCCAACGAATTTGAGATGTTTTCTTGATCTCAAGCGTCTAATCAGTTCATTATAAACCACTGCTACTATATTTGAGAGGAATGCCTGCAGTAGTCAGAGTTCAGGATCTATTTTGACCTGGCTGAAAATGACACCAGTTCTGGGGGTTTTGGAAGTAGAAAATTAGAAGCAACAGACAGTTCGACCTATATTAGAAAATGCTTATGAGATGATCCCTGTAAAAATATTTTGCATCTGAGATGTTCAGTTGCACTACTATTTTGCATGAGAGTTCTTTAATGGAATTGCTAACTTCATGGCGACA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||