These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7886#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1786 fasta sequence [TGAATTCGAAATTATTATTTCTGGAAAATCTCAGGAGAACAAAAGATCCATTAAGCATGAAGATGAACAACACCACTTTTAATGTTCTGATTTTTCCATCACTGCTAAAACAACACACCACCTAAAGACACTAACCTAACAGAAAGCCCTAACAGCTAGCTAATACTTCTGCCACATGGATACATCACATAACACACTCGCAATCTCACATGGTAACACTACCCAAAGAAAAAAGATGATAGTCGAGGCTCGAGATGAAGCCCCAAGGAGCATGAGATCGATCCATACCACACCATCCGGAGAAGACCGTAATCTTATAAATACGATTACACCAAGTTAGCACCTGGGTGCCGGCACGCTGCAGGCGGCTGCCACCTTCCTGCTGTTCTGGGAGTTGATGTACTTCCTCAGGTCGGGGTTCTTCGCGTACCTGCACAGGCAGCGCTTCTGCGCCCGGAGCCCCGCGCAGCACGCGGTGGACGGCGCCTCTCCCCATAGGATCGCCGCCGCGCACGGGCGCAGCGCCAGCGGGTCGCACTTCGTCGCGGCCGCCGGCGCTGTCCGGGACGCCCCGCACACCGTGCCTGGAGAGGTGACCACGGCCAGTACGAGTACGAGGACGAGCACCTCGTTAGGCTTCATGGTCATGGCTCGTCGCTGACGGCAACGCCGGTAAGTAGTGCTGAGATGAGCAGCAAGGTTGGAATGGTTTGGGAAGAGCACGAGAGGGGGTGGTATTTGTAGATGGAGCTGTGCTGCTGCTGCCTTCGAAGCGGAGGATGGCGCGCCGGGAAATGATGCGTTAGTTGTGCACTTGTGCACACGATAGCGTAAGAGGTAGAGCACGGTCGTTCGCATGCGAGTGCTTGGGGATTCTGAATCTGTTCTTGTTGTCACTTGTCAGTATGGAAGACAGAACTGCTTCGGAGTTTGGGTAGCTTGAAGTACACTGTATGCACAGTACATGCCAAGATTGTTATGCACTCAACTGAGTTTATTACTGCTAATTTTCTCGAGAGAAGTACTGCGAGCGGTGACAGGTTTTCTGCCTCACTGAACAATGGTCAAATGCAAAGGCTTAGCAGTTCGGCGCGGGCACCTTGCACGCGGTGAAGACCCTCTTGGTGCGATTGGAGCTGACAATGCGCTTCACTTTGGGGTCGTCCTTGTAGAGGCACAGGCAGCTGGAGCCCTGCGCCTTGAGCTTGGAGCAGCACGCGGACGATGGCGAGCCCTGCCCCACACCGGAG-AACGCGCTGACGCACGGGCTCAGCTGCATCAGGTCGCACGAAGCCTTCTTCGAGGCCCTCGCGCTGGCCGCGGCCGGGGTAGCCTGCAGGAGGAGGAGGCTGCTCAGC-AGCGCGGCGATGGCGATCGCCGCGACAACGGTGGAAAAAACAGAAGGCCTCGTCGTCATCGCGACGGCTTGATGGATCTCTTGCTGGACACCGGGATGCTAGGATGGGTTATCGTGGCCGGCGTGCGTGTGTGGCTTTTGTAGGCGCCGGCGACGGCGGGGGCAATGTGGCAGGTGAGTCACGGTGCAAGCGTGCGCAAGTGACTGCAACAACCAAGGACGGTCATGGCGAAAGCACCTCACGCGTCCACCGTCTACAGGATGTAGCAGTAGCACGGTGAAAGAAGTGTTGTCCCGTCCATTAGGTGCATTCTCACCGTTGGCCAGAACAGGACCGTTCAACAGTTAGGTTGAGTGTAGGACTTTTACGTGGTTAATGTATGGCAAATAGTAGTAAATTTTGCCCCCATTGGTCTGGCTGAGATAGAA] [-] EMBL AK064045 [TGAATTCGAAATTATTATTTCTGGAAAATCTCAGGAGAACAAAAGATCCATTAAGCATGAAGATGAACAACACCACTTTTAATGTTCTGATTTTTCCATCACTGCTAAAACAACACACCACCTAAAGACACTAACCTAACAGAAAGCCCTAACAGCTAGCTAATACTTCTGCCACATGGATACATCACATAACACACTCGCAATCTCACATGGTAACACTACCCAAAGAAAAAAGATGATAGTCGAGGCTCGAGATGAAGCCCCAAGGAGCATGAGATCGATCCATACCACACCATCCGGAGAAGACCGTAATCTTATAAATACGATTACACCAAGTTAGCACCTGGGTGCCGGCACGCTGCAGGCGGCTGCCACCTTCCTGCTGTTCTGGGAGTTGATGTACTTCCTCAGGTCGGGGTTCTTCGCGTACCTGCACAGGCAGCGCTTCTGCGCCCGGAGCCCCGCGCAGCACGCGGTGGACGGCGCCTCTCCCCATAGGATCGCCGCCGCGCACGGGCGCAGCGCCAGCGGGTCGCACTTCGTCGCGGCCGCCGGCGCTGTCCGGGACGCCCCGCACACCGTGCCTGGAGAGGTGACCACGGCCAGTACGAGTACGAGGACGAGCACCTCGTTAGGCTTCATGGTCATGGCTCGTCGCTGACGGCAACGCCGGTAAGTAGTGCTGAGATGAGCAGCAAGGTTG ] [-] EMBL AK122117 [ AGGAGAACAAAAGATCCATTAAGCATGAAGATGAACAACACCACTTTTAATGTTCTGATTTTTCCATCACTGCTAAAACAACACACCACCTAAAGACACTAACCTAACAGAAAGCCCTAACAGCTAGCTAATACTTCTGCCACATGGATACATCACATAACACACTCGCAATCTCACATGGTAACACTACCCAAAGAAAAAAGATGATAGTCGAGGCTCGAGATGAAGCCCCAAGGAGCATGAGATCGATCCATACCACACCATCCGGAGAAGACCGTAATCTTATAAATACGATTACACCAAGTTAGCACCTGGGTGCCGGCACGCTGCAGGCGGCTGCCACCTTCCTGCTGTTCTGGGAGTTGATGTACTTCCTCAGGTCGGGGTTCTTCGCGTACCTGCACAGGCAGCGCTTCTGCGCCCGGAGCCCCGCGCAGCACGCGGTGGACGGCGCCTCTCCCCATAGGATCGCCGCCGCGCACGGGCGCAGCGCCAGCGGGTCGCACTTCGTCGCGGCCGCCGGCGCTGTCCGGGACGCCCCGCACACCGTGCCTGGAGAGGTGACCACGGCCAGTACGAGTACGAGGACGAGCACCTCGTTAGGCTTCATGGTCATGGCTCGTCGCTGACGGCAACGCCGGTAAGTAGTGCTGAGATGAGCAGCAAG ] [+] EMBL AK111438 [ CTACCCAAAGAAAAAAGATGATAGTCGAGGCTCGAGATGAAGCCCCAAGGAGCATGAGATCGATCCATACCACACCATCCGGAGAAGACCGTAATCTTATAAATACGATTACACCAAGTTAGCACCTGGGTGCCGGCACGCTGCAGGCGGCTGCCACCTTCCTGCTGTTCTGGGAGTTGATGTACTTCCTCAGGTCGGGGTTCTTCGCGTACCTGCACAGGCAGCGCTTCTGCGCCCGGAGCCCCGCGCAGCACGCGGTGGACGGCGCCTCTCCCCATAGGATCGCCGCCGCGCACGGGCGCAGCGCCAGCGGGTCGCACTTCGTCGCGGCCGCCGGCGCTGTCCGGGACGCCCCGCACACCGTGCCTGGAGAGGTGACCACGGCCAGTACGAGTACGAGGACGAGCACCTCGTTAGGCTTCATGGTCATGGCTCGTCGCTGACGGCAACGCCGGTAAGTAGTGCTGAGATGAGCAGCAAGGTTGGAATGGTTTGGGAAGAGCACGAGAGGGGGTGGTATTTGTAGATGGAGCTGTGCTGCTGCTGCCTTCGAAGCGGAGGATGGCGCGCCGGGAAATGATGCGTTAGTTGTGCACTTGTGCACACGATAGCGTAAGAGGTAGAGCACGGTCGTTCGCATGCGAGTGCTTGGGGATTCTGAATCTGTTCTTGTTGTCACTTGTCAGTATGGAAGACAGAACTGCTTCGGAGTTTGGGTAGCTTGAAGTACACTGTATGCACAGTACATGCCAAGATTGTTATGCACTCAACTGAGTTTATTACTGCTAATTTTCTCGAGAGAAGTACTGCGAGCGGTGACAGGTTTTCTGCCTCACTGAACAATGGTCAAATGCAAAGGCTTAGCAGTTCGGCGCGGGCACCTTGCACGCGGTGAAGACCCTCTTGGTGCGATTGGAGCTGACAATGCGCTTCACTTTGGGGTCGTCCTTGTAGAGGCACAGGCAGCTGGAGCCCTGCGCCTTGAGCTTGGAGCAGCACGCGGACGATGGCGAGCCCTGCCCCACACCGGAG AACGCGCTGACGCACGGGCTCAGCTGCATCAGGTCGCACGAAGCCTTCTTCGAGGCCCTCGCGCTGGCCGCGGCCGGGGTAGCCTGCAGGAGGAGGAGGCTGCTCAGC AGCGCGGCGATGGCGATCGCCGCGACAACGGTGGAAAAAACAGAAGGCCTCGTCGTCATCGCGACGGCTTGATGGATCTCTTGCTGGACACCGGGATGCTAGGATGGGTTATCGTGGCCGGCGTGCGTGTGTGGCTTTTGTAGGCGCCGGCGACGGCGGGGGCAATGTGGCAGGTGAGTCACGGTGCAAGCGTGCGCAAGTGACTGCAACAACCAAGGACGGTCATGGCGAAAGCACCTCACGCGTCCACCGTCTACAGGATGTAGCAGTAGCACGGTGAAAGAAGTGTTGTCCCGTCCATTAGGTGCATTCTCACCGTTGGCCAGAACAGGACCGTTCAACAGTTAGGTTGAGTGTAGGACTTTTACGTGGTTAATGTATGGCAAATAGTAGTAAATTTTGCCCCCATTGGTCTGGCTGAGATAGAA] [-] EMBL AU029306 [ tTTTTTGTCACTTGTCAGTATGGAAGACAGAACTGCTTCGGAGTTTGGGTAGCTTGAAGTACACTGTATGCACAGTACATGCCAAGATTGTTATGCACTCAACTGAGTTTATTACTGCTAATTTTCTCGAGAGAAGTACTGCGAGCGGTGACAGGTTTTCTGCCTCACTGAACAATGGTCAAATGCAAAGGCTTAGCAGTTCGGCGCGGGCACCTTGCACGCGGTGAAGACCCTCTTGGTGCGATTGGAGCTGACAATGCGCTTCACTTTGGGGTCGTCCTTGTAGAGGCACAGGCAGCTGGAGCCCTGCGCCTTGAGCTTGGAGCAGCACGCGGACGATGGCGAGCCCTGCCCCACACCGGAG AACGCGCTGACGCACGGGCTCAGCTGCATCAGGTCGCACGAAGCCTTCTTCGAGGCCCTCGCGCTGGCCGCGGCCGGGGTAGCCTGCAGGAGGAGGAGGCTGCTCAGC AGCGCGGCGATGGCGATCG CGCGACAACGGTGGAAAAAACAGAAGGCCTCGTCGTCATCGCGACGGCTTGATGGATCTCTTGC ] [-] EMBL C74001 [ nCAAAGCCTTAGAAGTTCGGC NNGGCACCTTGCACGCGGTGAAGACCCTCTT GTTCGATTGAAGTTGACAATGCGCTTCACTTTGGGGTCGTCCTTGTAGAGGCACAGGCAGCTGGAGCCCTGCGCCTTGAGCTTGGAGCAGCACGCGGACGATGGCGAGCCCTGCCCCACACCGGAGAAACGC NTGACGCACGGGCTCAGCTGCATCAGGTCGCACGAAGCCTTCTTCGAGGCCCTCGCGCTGGCCGCGGCCGGGGTAGCCTGCAGGAGGAGGAGGCTGCTCAGCAAGC CGGCGATGGCGATCGCCGCGACAACGGTGGAAAAAACAGAAGGCCTCGTCGTCATCGCGACGGCTTGATGGATCTCTTGCTG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||