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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7894#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 738 fasta sequence
[CGCGAAGCCAAAGCCTCCGCCGCGATCCCCTCCGCCGCTCCCACGAGCTTCGCCGCCCGCTTCCGTCGCGCGTCGGCGATTCGCGCTCTCCCCGACTCCAGCGCCTTCGTCTTCTTCGACCTCCTCCTCCGAAGGCCCCGCCGATCGATCCCCGGTGTCCGCGCCTTCTAGTTCGCCTTTTCGAGCTCTTTTTCGCCGGAGACGACGGGCGTGGGCGATTCGGCTGGATTCCTCTCCGCATTCCTGTTAGGACTTAGGAGAAGTAATGTCAGGAGTATTAGCAAAATCCGCTATTGCATCTGCGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTA-CCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAAT-CGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCA-TTGATCAACCAACTCCGTCTCAAGTGAATGATGATTCCCATGGAAAGGGAAAGGTGGAGTAGGTCATATCACAACATGTGCATGTTTCACATGTTATCCAGAAACAGTTCTTCTCGATACCCTGCCTTCTAATTCAATATTATCTTCTGTAAATCTTGAGAATTATGGAACCAATATGAGTTTTACCTTTTGTACTGTTATTATCGAAAAA]
[+] EMBL AK122039 [CGCGAAGCCAAAGCCTCCGCCGCGATCCCCTCCGCCGCTCCCACGAGCTTCGCCGCCCGCTTCCGTCGCGCGTCGGCGATTCGCGCTCTCCCCGACTCCAGCGCCTTCGTCTTCTTCGACCTCCTCCTCCGAAGGCCCCGCCGATCGATCCCCGGTGTCCGCGCCTTCTAGTTCGCCTTTTCGAGCTCTTTTTCGCCGGAGACGACGGGCGTGGGCGATTCGGCTGGATTCCTCTCCGCATTCCTGTTAGGACTTAGGAGAAGTAATGTCAGGAGTATTAGCAAAATTCGCTATTGCATCTGCGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTA CCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAAT CGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCA TCGATCAACCAACTCCGTCTCAAGTGAATGATGATTCCCATGGAAAGGGAAAGGTGGAGTAGGTCATATCACAACATGTGCATGTTTCACATGTTATCCAGAAACAGTTCTTCTCGATACCCTGCCTTCTAATTCAATATTATCTTCTGTAAATCTTGAGAATTATGGAACCAATATGAGTTTTACCTT ]
[+] EMBL CF319437 [ AAAGCCTCCGCCGCGATCCCCTCCGCCGCTCCCACGAGCTTCGCCGCCCGCTTCCGTCGCGCGTCGGCGATTCGCGCTCTCCCCGACTCCAGCGCCTTCGTCTTCTTCGACCTCCTCCTCCGAAGGCCCCGCCGATCGATCCCCGGTGTCCGCGCCTTCTAGTTCGCCTTTTCGAGCTCTTTTTCGCCGGAGACGACGGGCGTGGGCGATTCGGCTGGATTCCTCTCCGCATTCCTGTTAGGACTTAGGAGAAGTAATGTCAGGAGTATTAGCAAAATCCGCTATTGCATCTGCGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTA CCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAAT CGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCA TTGA ]
[+] EMBL OSS4962A [ CTAGTTCGCCTTTTAGAGCTCTTTTTCGCCGGAGACGACGGGCGTGGGCGNTTCGGCTGGATTCCTCTCCGCATTCCTGTTAGGACTTAGGNGAAGTAANNTCAGGAGTATTNNCAAAAANNGCTATTNCATCTNNGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTA CCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAAT CGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCATTTGNTCAACCAACTNCGTC ]
[-] EMBL CF319438 [ AGACGACGGGCGTGGGCGATTCGGCTGGATTCCTCTCCGCATTCCTGTTAGGACTTAGGAGAAGTAATGTCAGGAGTATTAGCAAAATCCGCTATTGCATCTGCGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTA CCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAAT CGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCA TTGATCAACCAACTCCGTCTCAAGTGAATGATGATTCCCATGGAAAGGGAAAGGTGGAGTAGGTCATATCACAACATGTGCATGTTTCACATGTTATCCAGAAACAGTTCTTCTCGATACCCTGCCTTCTAATTCAATATTATCTTCTGTAAATCTTGAGAATTATGGAACCAATATGAGTTTTACCTTTTGTACTGTTATTATCGAAAAA]
[+] EMBL AU088732 [ cCGTGTATGGATTTTACTACCCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTNTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAATNCGGNTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCA TTGATCAACCAACTCCGTCTCAAGTGAATGATGATTCCCATGGAAAGGGAAAGGTGGAGTAGGTCATATCACAACATGTGCATGTTTCACATGTTATCCAGAAACAGTTCTTCTCGATACCCTGCCTTCTAATTCAATATTATCTTCTGTAAATCTTGAGAATTATGGAACCAATATGAGTTTTACCTTTTGTACTGTTAaaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||