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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7894 cluster # 7894       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7894#0 length = 738 sequences # 5  

consensusID : consensus_7894#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 738
fasta sequence
                              [CGCGAAGCCAAAGCCTCCGCCGCGATCCCCTCCGCCGCTCCCACGAGCTTCGCCGCCCGCTTCCGTCGCGCGTCGGCGATTCGCGCTCTCCCCGACTCCAGCGCCTTCGTCTTCTTCGACCTCCTCCTCCGAAGGCCCCGCCGATCGATCCCCGGTGTCCGCGCCTTCTAGTTCGCCTTTTCGAGCTCTTTTTCGCCGGAGACGACGGGCGTGGGCGATTCGGCTGGATTCCTCTCCGCATTCCTGTTAGGACTTAGGAGAAGTAATGTCAGGAGTATTAGCAAAATCCGCTATTGCATCTGCGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTA-CCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAAT-CGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCA-TTGATCAACCAACTCCGTCTCAAGTGAATGATGATTCCCATGGAAAGGGAAAGGTGGAGTAGGTCATATCACAACATGTGCATGTTTCACATGTTATCCAGAAACAGTTCTTCTCGATACCCTGCCTTCTAATTCAATATTATCTTCTGTAAATCTTGAGAATTATGGAACCAATATGAGTTTTACCTTTTGTACTGTTATTATCGAAAAA]

[+] EMBL AK122039             [CGCGAAGCCAAAGCCTCCGCCGCGATCCCCTCCGCCGCTCCCACGAGCTTCGCCGCCCGCTTCCGTCGCGCGTCGGCGATTCGCGCTCTCCCCGACTCCAGCGCCTTCGTCTTCTTCGACCTCCTCCTCCGAAGGCCCCGCCGATCGATCCCCGGTGTCCGCGCCTTCTAGTTCGCCTTTTCGAGCTCTTTTTCGCCGGAGACGACGGGCGTGGGCGATTCGGCTGGATTCCTCTCCGCATTCCTGTTAGGACTTAGGAGAAGTAATGTCAGGAGTATTAGCAAAATTCGCTATTGCATCTGCGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTA CCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAAT CGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCA TCGATCAACCAACTCCGTCTCAAGTGAATGATGATTCCCATGGAAAGGGAAAGGTGGAGTAGGTCATATCACAACATGTGCATGTTTCACATGTTATCCAGAAACAGTTCTTCTCGATACCCTGCCTTCTAATTCAATATTATCTTCTGTAAATCTTGAGAATTATGGAACCAATATGAGTTTTACCTT                      ]
[+] EMBL CF319437             [         AAAGCCTCCGCCGCGATCCCCTCCGCCGCTCCCACGAGCTTCGCCGCCCGCTTCCGTCGCGCGTCGGCGATTCGCGCTCTCCCCGACTCCAGCGCCTTCGTCTTCTTCGACCTCCTCCTCCGAAGGCCCCGCCGATCGATCCCCGGTGTCCGCGCCTTCTAGTTCGCCTTTTCGAGCTCTTTTTCGCCGGAGACGACGGGCGTGGGCGATTCGGCTGGATTCCTCTCCGCATTCCTGTTAGGACTTAGGAGAAGTAATGTCAGGAGTATTAGCAAAATCCGCTATTGCATCTGCGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTA CCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAAT CGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCA TTGA                                                                                                                                                                                                               ]
[+] EMBL OSS4962A             [                                                                                                                                                                       CTAGTTCGCCTTTTAGAGCTCTTTTTCGCCGGAGACGACGGGCGTGGGCGNTTCGGCTGGATTCCTCTCCGCATTCCTGTTAGGACTTAGGNGAAGTAANNTCAGGAGTATTNNCAAAAANNGCTATTNCATCTNNGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTA CCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAAT CGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCATTTGNTCAACCAACTNCGTC                                                                                                                                                                                                ]
[-] EMBL CF319438             [                                                                                                                                                                                                       AGACGACGGGCGTGGGCGATTCGGCTGGATTCCTCTCCGCATTCCTGTTAGGACTTAGGAGAAGTAATGTCAGGAGTATTAGCAAAATCCGCTATTGCATCTGCGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTA CCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAAT CGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCA TTGATCAACCAACTCCGTCTCAAGTGAATGATGATTCCCATGGAAAGGGAAAGGTGGAGTAGGTCATATCACAACATGTGCATGTTTCACATGTTATCCAGAAACAGTTCTTCTCGATACCCTGCCTTCTAATTCAATATTATCTTCTGTAAATCTTGAGAATTATGGAACCAATATGAGTTTTACCTTTTGTACTGTTATTATCGAAAAA]
[+] EMBL AU088732             [                                                                                                                                                                                                                                                                                                                                         cCGTGTATGGATTTTACTACCCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTNTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAATNCGGNTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCA TTGATCAACCAACTCCGTCTCAAGTGAATGATGATTCCCATGGAAAGGGAAAGGTGGAGTAGGTCATATCACAACATGTGCATGTTTCACATGTTATCCAGAAACAGTTCTTCTCGATACCCTGCCTTCTAATTCAATATTATCTTCTGTAAATCTTGAGAATTATGGAACCAATATGAGTTTTACCTTTTGTACTGTTAaaaaa      ]


>consensus_7894#0 CGCGAAGCCAAAGCCTCCGCCGCGATCCCCTCCGCCGCTCCCACGAGCTTCGCCGCCCGC TTCCGTCGCGCGTCGGCGATTCGCGCTCTCCCCGACTCCAGCGCCTTCGTCTTCTTCGAC CTCCTCCTCCGAAGGCCCCGCCGATCGATCCCCGGTGTCCGCGCCTTCTAGTTCGCCTTT TCGAGCTCTTTTTCGCCGGAGACGACGGGCGTGGGCGATTCGGCTGGATTCCTCTCCGCA TTCCTGTTAGGACTTAGGAGAAGTAATGTCAGGAGTATTAGCAAAATCCGCTATTGCATC TGCGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTACCAGATGATTCC AGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTAT ATCGATTAATCTGGTAATCGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCCACCA AGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCATTGATCAACCAAC TCCGTCTCAAGTGAATGATGATTCCCATGGAAAGGGAAAGGTGGAGTAGGTCATATCACA ACATGTGCATGTTTCACATGTTATCCAGAAACAGTTCTTCTCGATACCCTGCCTTCTAAT TCAATATTATCTTCTGTAAATCTTGAGAATTATGGAACCAATATGAGTTTTACCTTTTGT ACTGTTATTATCGAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)