cluster # 7914

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7914 cluster # 7914 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7914#0 length = 2285 sequences # 5
consensusID : consensus_7914#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2285
fasta sequence
                              [CAGCAGTGAATGCTACTCTCGCTCTGCTACTCACTCCTGGCGCCGGTGACCTCTCTGCCACTCCACCGGACGGCGACGGCGAGGCGGGTGAGCTCTCTCGCCGCCTCCGGCTCTCCTGCCACCGGGCCTCCACATTCGGCGTCGCACTCCTTCGTCTTCGCGTGATCCGCCTGGCAGATCGGGATCGACTAAGCATTGGCCTTTGCAAGTTTTGAAGTGCATTTCACCGTTGCTTTTGTCTTGAGCAAGAGTTTATAGAGCCATACAGCTCCGACAAAAGGATTCACCTATTCCAGAATGTCTGCTTTGCTCCGTGAAACTTCGTGTGGATCATTGCTGCAAAAACTGCAGTCGGTATGGGATGAAGTTGGTGAAAGCGAGGAGGACCGCGACAAGGTTCTATTTCAGCTGGACCAGGAGTGTTTGGATGTCTACAAGCGGAAAGTTGATCAGGCAACCAAATCAAGGGATCTTCTTCTCCAGGCACTGGATTACTCAAAGACAGAGCTTGCTAGGCTTGCTTCTGCCCTTGGTGAAAAATCCATAGATATAAGTCCTGAGAAAACAGCACGGACTATCAAGGAACAACTAACTGCTATAGCTCCAACACTTGAACAATTGGGCAAGAAGAAAAAGGAGAGAATAAAGGAATTAGCTAATATACAGTCAAGAATTGAGCAAATACGTGGTGAGATTGCTGGTACTCTGGAGATGGGACAGCAAGTGGCACTACCACAGATTAATGAGGATGATTTGACAGTTCGGAAGCTTCGAGAGTTCCAGTTACAGCTTCAAGAGCTTGAGAAAGAGAAGAGTCGTAGGCTGGAAAAGGTTCTTGAGCATGTTGGTATGGTACATGATCTATGCAATGTGCTTGGGATGGATTTTTTTAGAACAATAACTCAAGTCCATAGCAGTCTAGATGACTCTATTGGTAACGAACACAAGAACATAAGCAATGAAACCCTGTCAAAACTTGATAGGACCATTGGTACTCTTAATGAGGACAAAAGGTTGAGACTTGAGAAGCTTCAAGAGCTTGCCACTCAACTCTATGATCTATGGGATCTTATGGACACCCCGGTGGAAGAAAGGAGCTTGTTTGATCATGTTTCGTGCAATAGAACAGCAACTGTTGAGGAGGTCATGGTTCCTGGTGCACTTGCTGTTGATGTGATTGATCAAGCACAGACTGAGGTTGAAAGGTTGGATCAGCTAAAATACAGCAAGATGAAAGAAATAGCTTTTAAGAAGCAAGCCATACTGGAAGATATTTATGCTAGCACTCATGTTGTATTAGACACAGCAGTTGCCCATGAGAAAATACAGGCACTGATTGAGTCAGGGAACATGGAACCTTCAGAACTGATTGCTGACATGGATAGTCAGATACTGAAAGCAAAGGAGGAAGCTCTGAGCAGAAAAGAAATATTAGATAAAGTTGAGAGATGGATATCCTCATGCGAGGAGGAAAGCTGGCTTGAAGACTATAGCAGAGATGACAACAGGTATAACTCAGGCCGAGGTGCTCACCTGAATCTCAAACGTGCAGAAAAGGCCCGTATTCTAGTCAGCAAGATTCCAGCCCTTGTTGAAACTCTGGTGGCTAAGACGAGAGCTTGGGAAGAAAATCACGGGCTGCCATTTATGTATGACGGTGTTTCTCTGCTAGCAATGCTGGATGAGTATGTCATTC--TTAGGCAAGAGAGGGAAGAAGAGAAGAAAAGAATGCGGGAACAAAAACGCCAGAC-GGAACAGCTACTAAACATCGACCGTGAGGGGCCATTCGGAACACGGGTCAATCCCTACAGAGTGACCAGTGCAAAGAAGGTGGCTGGCACAAAGCCAAACGGTGGCGCATCAAACGGGACACCGAGTAGAAGGCTATCAACCGGCAATCAGC-TGAACGAGAGCAAGAGTACTGGCCGGTCTGCTGGTAAGGATGACAAGAAAGGCGCGTCGAAGAACACGGCAACTTCACTGAACGAAGCAGCTCCTGCAGACAAGGAAGCTGCAGACTCATCCACCGAAAACTTCGACGCTGATCCGGTTCCTGGCTCGACATGATCTCGATGTGGTACAGATGAATGGTGATTTCTGTCTTTTTTGACACCCTTTATTGTGTTCGTTGTAGTATCTTGTTGTTAGGTTTTAGACCTGTCGTTTCTTTCTGTTGACTGGTGGTTAGTGCCTGAGTGGTGTTCAAACATATGGGCGGTTTATATTAGCTGTTTAGCTCTAATCTTGCCGTCAGAAGTAAAATTAGCCTCTCGTAAGTTTTATTG]

[+] EMBL AK121803             [CAGCAGTGAATGCTACTCTCGCTCTGCTACTCACTCCTGGCGCCGGTGACCTCTCTGCCACTCCACCGGACGGCGACGGCGAGGCGGGTGAGCTCTCTCGCCGCCTCCGGCTCTCCTGCCACCGGGCCTCCACATTCGGCGTCGCACTCCTTCGTCTTCGCGTGATCCGCCTGGCAGATCGGGATCGACTAAGCATTGGCCTTTGCAAGTTTTGAAGTGCATTTCACCGTTGCTTTTGTCTTGAGCAAGAGTTTATAGAGCCATACAGCTCCGACAAAAGGATTCACCTATTCCAGAATGTCTGCTTTGCTCCGTGAAACTTCGTGTGGATCATTGCTGCAAAAACTGCAGTCGGTATGGGATGAAGTTGGTGAAAGCGAGGAGGACCGCGACAAGGTTCTATTTCAGCTGGACCAGGAGTGTTTGGATGTCTACAAGCGGAAAGTTGATCAGGCAACCAAATCAAGGGATCTTCTTCTCCAGGCACTGGATTACTCAAAGACAGAGCTTGCTAGGCTTGCTTCTGCCCTTGGTGAAAAATCCATAGATATAAGTCCTGAGAAAACAGCACGGACTATCAAGGAACAACTAACTGCTATAGCTCCAACACTTGAACAATTGGGCAAGAAGAAAAAGGAGAGAATAAAGGAATTAGCTAATATACAGTCAAGAATTGAGCAAATACGTGGTGAGATTGCTGGTACTCTGGAGATGGGACAGCAAGTGGCACTACCACAGATTAATGAGGATGATTTGACAGTTCGGAAGCTTCGAGAGTTCCAGTTACAGCTTCAAGAGCTTGAGAAAGAGAAGAGTCGTAGGCTGGAAAAGGTTCTTGAGCATGTTGGTATGGTACATGATCTATGCAATGTGCTTGGGATGGATTTTTTTAGAACAATAACTCAAGTCCATAGCAGTCTAGATGACTCTATTGGTAACGAACACAAGAACATAAGCAATGAAACCCTGTCAAAACTTGATAGGACCATTGGTACTCTTAATGAGGACAAAAGGTTGAGACTTGAGAAGCTTCAAGAGCTTGCCACTCAACTCTATGATCTATGGGATCTTATGGACACCCCGGTGGAAGAAAGGAGCTTGTTTGATCATGTTTCGTGCAATAGAACAGCAACTGTTGAGGAGGTCATGGTTCCTGGTGCACTTGCTGTTGATGTGATTGATCAAGCACAGACTGAGGTTGAAAGGTTGGATCAGCTAAAATACAGCAAGATGAAAGAAATAGCTTTTAAGAAGCAAGCCATACTGGAAGATATTTATGCTAGCACTCATGTTGTATTAGACACAGCAGTTGCCCATGAGAAAATACAGGCACTGATTGAGTCAGGGAACATGGAACCTTCAGAACTGATTGCTGACATGGATAGTCAGATACTGAAAGCAAAGGAGGAAGCTCTGAGCAGAAAAGAAATATTAGATAAAGTTGAGAGATGGATATCCTCATGCGAGGAGGAAAGCTGGCTTGAAGACTATAGCAGAGATGACAACAGGTATAACTCAGGCCGAGGTGCTCACCTGAATCTCAAACGTGCAGAAAAGGCCCGTATTCTAGTCAGCAAGATTCCAGCCCTTGTTGAAACTCTGGTGGCTAAGACGAGAGCTTGGGAAGAAAATCACGGGCTGCCATTTATGTATGACGGTGTTTCTCTGCTAGCAATGCTGGATGAGTATGTCATTC  TTAGGCAAGAGAGGGAAGAAGAGAAGAAAAGAATGCGGGAACAAAAACGCCAGAC GGAACAGCTACTAAACATCGACCGTGAGGGGCCATTCGGAACACGGGTCAATCCCTACAGAGTGACCAGTGCAAAGAAGGTGGCTGGCACAAAGCCAAACGGTGGCGCATCAAACGGGACACCGAGTAGAAGGCTATCAACCGGCAATCAGC TGAACGAGAGCAAGAGTACTGGCCGGTCTGCTGGTAAGGATGACAAGAAAGGCGCGTCGAAGAACACGGCAACTTCACTGAACGAAGCAGCTCCTGCAGACAAGGAAGCTGCAGACTCATCCACCGAAAACTTCGACGCTGATCCGGTTCCTGGCTCGACATGATCTCGATGTGGTACAGATGAATGGTGATTTCTGTCTTTTTTGACACCCTTTATTGTGTTCGTTGTAGTATCTTGTTGTTAGGTTTTAGACCTGTCGTTTCTTTCTGTTGACTGGTGGTTAGTGCCTGAGTGGTGTTCAAACATATGGGCGGTTTATATTAGCTGTTTAGCTCTAATCTTGCCGTCAGAAGTAAAATTAGCCTCTCGTAAGTTT     ]
[+] EMBL AK105451             [             TACTCTCGCTCTGCTACTCACTCCTGGCGCCGGTGACCTCTCTGCCACTCCACCGGACGGCGACGGCGAGGCGGGTGAGCTCTCTCGCCGCCTCCGGCTCTCCTGCCACCGGGCCTCCACATTCGGCGTCGCACTCCTTCGTCTTCGCGTGATCCGCCTGGCAGATCGGGATCGACTAAGCATTGGCCTTTGCAAGTTTTGAAGTGCATTTCACCGTTGCTTTTGTCTTGAGCAAGAGTTTATAGAGCCATACAGCTCCGACAAAAGGATTCACCTATTCCAGAATGTCTGCTTTGCTCCGTGAAACTTCGTGTGGATCATTGCTGCAAAAACTGCAGTCGGTATGGGATGAAGTTGGTGAAAGCGAGGAGGACCGCGACAAGGTTCTATTTCAGCTGGACCAGGAGTGTTTGGATGTCTACAAGCGGAAAGTTGATCAGGCAACCAAATCAAGGGATCTTCTTCTCCAGGCACTGGATTACTCAAAGACAGAGCTTGCTAGGCTTGCTTCTGCCCTTGGTGAAAAATCCATAGATATAAGTCCTGAGAAAACAGCACGGACTATCAAGGAACAACTAACTGCTATAGCTCCAACACTTGAACAATTGGGCAAGAAGAAAAAGGAGAGAATAAAGGAATTAGCTAATATACAGTCAAGAATTGAGCAAATACGTGGTGAGATTGCTGGTACTCTGGAGATGGGACAGCAAGTGGCACTACCACAGATTAATGAGGATGATTTGACAGTTCGGAAGCTTCGAGAGTTCCAGTTACAGCTTCAAGAGCTTGAGAAAGAGAAGAGTCGTAGGCTGGAAAAGGTTCTTGAGCATGTTGGTATGGTACATGATCTATGCAATGTGCTTGGGATGGATTTTTTTAGAACAATAACTCAAGTCCATAGCAGTCTAGATGACTCTATTGGTAACGAACACAAGAACATAAGCAATGAAACCCTGTCAAAACTTGATAGGACCATTGGTACTCTTAATGAGGACAAAAGGTTGAGACTTGAGAAGCTTCAAGAGCTTGCCACTCAACTCTATGATCTATGGGATCTTATGGACACCCCGGTGGAAGAAAGGAGCTTGTTTGATCATGTTTCGTGCAATAGAACAGCAACTGTTGAGGAGGTCATGGTTCCTGGTGCACTTGCTGTTGATGTGATTGATCAAGCACAGACTGAGGTTGAAAGGTTGGATCAGCTAAAATACAGCAAGATGAAAGAAATAGCTTTTAAGAAGCAAGCCATACTGGAAGATATTTATGCTAGCACTCATGTTGTATTAGACACAGCAGTTGCCCATGAGAAAATACAGGCACTGATTGAGTCAGGGAACATGGAACCTTCAGAACTGATTGCTGACATGGATAGTCAGATACTGAAAGCAAAGGAGGAAGCTCTGAGCAGAAAAGAAATATTAGATAAAGTTGAGAGATGGATATCCTCATGCGAGGAGGAAAGCTGGCTTGAAGACTATAGCAGAGATGACAACAGGTATAACTCAGGCCGAGGTGCTCACCTGAATCTCAAACGTGCAGAAAAGGCCCGTATTCTAGTCAGCAAGATTCCAGCCCTTGTTGAAACTCTGGTGGCTAAGACGAGAGCTTGGGAAGAAAATCACGGGCTGCCATTTATGTATGACGGTGTTTCTCTGCTAGCAATGCTGGATGAGTATGTCATTC  TTAGGCAAGAGAGGGAAGAAGAGAAGAAAAGAATGCGGGAACAAAAACGCCAGAC GGAACAGCTACTAAACATCGACCGTGAGGGGCCATTCGGAACACGGGTCAATCCCTACAGAGTGACCAGTGCAAAGAAGGTGGCTGGCACAAAGCCAAACGGTGGCGCATCAAACGGGACACCGAGTAGAAGGCTATCAACCGGCAATCAGC TGAACGAGAGCAAGAGTACTGGCCGGTCTGCTGGTAAGGATGACAAGAAAGGCGCGTCGAAGAACACGGCAACTTCACTGAACGAAGCAGCTCCTGCAGACAAGGAAGCTGCAGACTCATCCACCGAAAACTTCGACGCTGATCCGGTTCCTGGCTCGACATGATCTCGATGTGGTACAGATGAATGGTGATTTCTGTCTTTTTTGACACCCTTTATTGTGTTCGTTGTAGTATCTTGTTGTTAGGTTTTAGACCTGTCGTTTCTTTCTGTTGACTGGTGGTTAGTGCCTGAGTGGTGTTCAAACATATGGGCGGTTTATATTAGCTGTTTAGCTCTAATCTTGCCGTCAGAAGTAAAATTAGCCTCTCGTAAGTTTTATTG]
[+] EMBL CA766568             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCATGCGAGGAGGAAAGCTGGCTTGAAGACTATAGCAGAGATGACAACAGGTATAACTCAGGCCGAGGTGCTCACCTGAATCTCAAACGTGCAGAAAAGGCCCGTATTCTAGTCAGCAAGATTCCAGCCCTTGTTGAAACTCTGGTGGCTAAGACGAGAGCTTGGGAAGAAAATCANGNTCTGCCATTTATGTATGACGGTGTTTCTCTGCTAGCNGNGNTGGATGAGTATGCCNCCCCNCTAGGCAAGAGAGGGAAGAAGAGAAGAAAAGAATGCGGGAACAAAAACGCCANACAAAAACANCTACTAAACATCGACCGTGAGGGGCCATTCGGAACACGGGTCAATCCCTACAGAGTGACCAGTGCAAAGAAGGGGGCTGGCACAAAGCCAAACGGTGGCGCATNAAACGGGACACCGAGTAGAAGGCTATCAACCGGCAATCAGCNTGAACGAGAGCAAGAGTACTGGNCGGCCTGCTGGTAAGGATGAC                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CA998402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACCGTGAGGGGCCATTCGGAACACGGGTCAATCCCTACAGAGTGACCAGTGCAAAGAAGGTGGCTGGCACAAAGCCAAACGGTGGCGCATCAAACGGGACACCGAGTAGAAGGCTATCAACCGGCAATCAGC TGAACGAGAGCAAGAGTACTGGCCGGTCTGCTGGTAAGGATGACAAGAAAGGCGCGTCGAAGAACACGGCAACTTCACTGAACGAAGCAGCTCCTGCAGACAAGGAAGCTGCAGACTCATCCACCGAAAACTTCGACGCTGATCCGGTTCCTGGCTCGACATGATCTCGATGTGGTACAGATGAATGGTGATTTCTGTCTTTTTTGACACCCTTTATTGTGTTCGTTGTAGTATCTTGTTGTTAGGTTTTAGACCTGTCGTTTCTTTCTGTTGACTGGTGGTTAGTGCCTGAGTGGTGTTCAAACATATGGGCGGTTTATATTAGCTGTTTAGCTCTAATCTTGCCGTCAGAAGTAAAATTAGCCTCTCGTAAGTT      ]
[+] EMBL CA998403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACCGTGAGGGGCCATTCGGAACACGGGTCAATCCCTACAGAGTGACCAGTGCAAAGAAGGTGGCTGGCACAAAGCCAAACGGTGGCGCATCAAACGGGACACCGAGTAGAAGGCTATCAACCGGCAATCAGC TGAACGAGAGCAAGAGTACTGGCCGGTCTGCTGGTAAGGATGACAAGAAAGGCGCGTCGAAGAACACGGCAACTTCACTGAACGAAGCAGCTCCTGCAGACAAGGAAGCTGCAGACTCATCCACCGAAAACTTCGACGCTGATCCGGTTCCTGGCTCGACATGATCTCGATGTGGTACAGATGAATGGTGATTTCTGTCTTTTTTGACACCCTTTATTGTGTTCGTTGTAGTATCTTGTTGTTAGGTTTTAGACCTGTCGTTTCTTTCTGTTGACTGGTGGTTAGTGCCTGAGTGGTGTTCAAACATATGGGCGGTTTATATTAGCTGTTTAGCTCTAATCTTGCCGTCAGAAGTAAAATTAGCCTCTCGTAAGT       ]




>consensus_7914#0
CAGCAGTGAATGCTACTCTCGCTCTGCTACTCACTCCTGGCGCCGGTGACCTCTCTGCCA
CTCCACCGGACGGCGACGGCGAGGCGGGTGAGCTCTCTCGCCGCCTCCGGCTCTCCTGCC
ACCGGGCCTCCACATTCGGCGTCGCACTCCTTCGTCTTCGCGTGATCCGCCTGGCAGATC
GGGATCGACTAAGCATTGGCCTTTGCAAGTTTTGAAGTGCATTTCACCGTTGCTTTTGTC
TTGAGCAAGAGTTTATAGAGCCATACAGCTCCGACAAAAGGATTCACCTATTCCAGAATG
TCTGCTTTGCTCCGTGAAACTTCGTGTGGATCATTGCTGCAAAAACTGCAGTCGGTATGG
GATGAAGTTGGTGAAAGCGAGGAGGACCGCGACAAGGTTCTATTTCAGCTGGACCAGGAG
TGTTTGGATGTCTACAAGCGGAAAGTTGATCAGGCAACCAAATCAAGGGATCTTCTTCTC
CAGGCACTGGATTACTCAAAGACAGAGCTTGCTAGGCTTGCTTCTGCCCTTGGTGAAAAA
TCCATAGATATAAGTCCTGAGAAAACAGCACGGACTATCAAGGAACAACTAACTGCTATA
GCTCCAACACTTGAACAATTGGGCAAGAAGAAAAAGGAGAGAATAAAGGAATTAGCTAAT
ATACAGTCAAGAATTGAGCAAATACGTGGTGAGATTGCTGGTACTCTGGAGATGGGACAG
CAAGTGGCACTACCACAGATTAATGAGGATGATTTGACAGTTCGGAAGCTTCGAGAGTTC
CAGTTACAGCTTCAAGAGCTTGAGAAAGAGAAGAGTCGTAGGCTGGAAAAGGTTCTTGAG
CATGTTGGTATGGTACATGATCTATGCAATGTGCTTGGGATGGATTTTTTTAGAACAATA
ACTCAAGTCCATAGCAGTCTAGATGACTCTATTGGTAACGAACACAAGAACATAAGCAAT
GAAACCCTGTCAAAACTTGATAGGACCATTGGTACTCTTAATGAGGACAAAAGGTTGAGA
CTTGAGAAGCTTCAAGAGCTTGCCACTCAACTCTATGATCTATGGGATCTTATGGACACC
CCGGTGGAAGAAAGGAGCTTGTTTGATCATGTTTCGTGCAATAGAACAGCAACTGTTGAG
GAGGTCATGGTTCCTGGTGCACTTGCTGTTGATGTGATTGATCAAGCACAGACTGAGGTT
GAAAGGTTGGATCAGCTAAAATACAGCAAGATGAAAGAAATAGCTTTTAAGAAGCAAGCC
ATACTGGAAGATATTTATGCTAGCACTCATGTTGTATTAGACACAGCAGTTGCCCATGAG
AAAATACAGGCACTGATTGAGTCAGGGAACATGGAACCTTCAGAACTGATTGCTGACATG
GATAGTCAGATACTGAAAGCAAAGGAGGAAGCTCTGAGCAGAAAAGAAATATTAGATAAA
GTTGAGAGATGGATATCCTCATGCGAGGAGGAAAGCTGGCTTGAAGACTATAGCAGAGAT
GACAACAGGTATAACTCAGGCCGAGGTGCTCACCTGAATCTCAAACGTGCAGAAAAGGCC
CGTATTCTAGTCAGCAAGATTCCAGCCCTTGTTGAAACTCTGGTGGCTAAGACGAGAGCT
TGGGAAGAAAATCACGGGCTGCCATTTATGTATGACGGTGTTTCTCTGCTAGCAATGCTG
GATGAGTATGTCATTCTTAGGCAAGAGAGGGAAGAAGAGAAGAAAAGAATGCGGGAACAA
AAACGCCAGACGGAACAGCTACTAAACATCGACCGTGAGGGGCCATTCGGAACACGGGTC
AATCCCTACAGAGTGACCAGTGCAAAGAAGGTGGCTGGCACAAAGCCAAACGGTGGCGCA
TCAAACGGGACACCGAGTAGAAGGCTATCAACCGGCAATCAGCTGAACGAGAGCAAGAGT
ACTGGCCGGTCTGCTGGTAAGGATGACAAGAAAGGCGCGTCGAAGAACACGGCAACTTCA
CTGAACGAAGCAGCTCCTGCAGACAAGGAAGCTGCAGACTCATCCACCGAAAACTTCGAC
GCTGATCCGGTTCCTGGCTCGACATGATCTCGATGTGGTACAGATGAATGGTGATTTCTG
TCTTTTTTGACACCCTTTATTGTGTTCGTTGTAGTATCTTGTTGTTAGGTTTTAGACCTG
TCGTTTCTTTCTGTTGACTGGTGGTTAGTGCCTGAGTGGTGTTCAAACATATGGGCGGTT
TATATTAGCTGTTTAGCTCTAATCTTGCCGTCAGAAGTAAAATTAGCCTCTCGTAAGTTT
TATTG
clustalw multiple alignements is not computed in this case