These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7950#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1082 fasta sequence [ACGCTACTCCCATCCCCACTCTCGTCGCTCGTCGGTATACCAAACCGAAAAGCTAGTCAATCCGACCCCACCCGATCCGATGGCCGCCACATCGCCGGACTCCGGCGACCTCATCCTGGTCGAGCCGGCCAAGCCGGGGTCCCGGGTCGCCGTCGTCACCATCAACCGGCCCAAAGCGCTGAACGCGCTGACGCGGCCCATGATGGTCTCACTGGCCGCGGCGTTCCGGCGGCTGGACGCCGACGACGGGGTGGCGGCGGTGGTGCTCGCGGGGCGCGGCCGCGCGTTCTGCTCCGGCGTGGACCTGACCGCTGCGGAGGAGGTGTTCAAGGGCGACGTGAAGGATCCCGCCGCCGACCCCGTCGTCCAGATGGAGCGCTGTCGCAAGCCCATCGTCGGCGCCATCGCCGGATTCGCCGTCACCGCCGGATTTGAGATCGCCCTCGCCTGCGACATCCTAGTGGCCGGCCGCTCCGCTAAGTTCATCGACACCCACGCCAAGTTTGGGATATTCCCTTCTTGGGGTCTTTCACAGAAGCTTTCTCGTGTCATTGGACCAAATAGAGCACGGGAAGTGTCGTTAACTTGCATGCCTATCACAGCTGAAATGGCGGAGAA-GTGGGGTCTTGTTAACCACATTGTGGATGATACCCAGGTGCTGAGTAAGGCAATAGAGGTCTGTGAGGCCATTGCAAGGAACAATCGCAACTTGGTTGTGTTGTATAAATCTGTTATAAATGACGGGCTCCAGCTGGACTTGGAACATGCTCGAGCTCTTGAAAAGGAAAGAGCTCA-TGACTATTACAATGGTATGACAAAAGAGCAATTCGCAAGTATGCAGAAATTTATACAGGGCCGGAGTTCGAAGCCACCATCAAAGCTGTGATGATATATGTTCTGTACCACTGTATGTACCGAAAT-ATCAATGTACTGTATACATCCACT-GAAGTGTTCAATGACC-TGAAAGAAAAATAAACACTGCCAATGTTGCATACAAAGAAAGTACCATCTTCACATGTGTTATTGGAAGAGTATCGCAGCCTATGCTGCTGTTTTCCATTCTGATGTTGGGCGCCGCGAGC] [+] EMBL AK068241 [ACGCTACTCCCATCCCCACTCTCGTCGCTCGTCGGTATACCAAACCGAAAAGCTAGTCAATCCGACCCCACCCGATCCGATGGCCGCCACATCGCCGGACTCCGGCGACCTCATCCTGGTCGAGCCGGCCAAGCCGGGGTCCCGGGTCGCCGTCGTCACCATCAACCGGCCCAAAGCGCTGAACGCGCTGACGCGGCCCATGATGGTCTCACTGGCCGCGGCGTTCCGGCGGCTGGACGCCGACGACGGGGTGGCGGCGGTGGTGCTCGCGGGGCGCGGCCGCGCGTTCTGCTCCGGCGTGGACCTGACCGCTGCGGAGGAGGTGTTCAAGGGCGACGTGAAGGATCCCGCCGCCGACCCCGTCGTCCAGATGGAGCGCTGTCGCAAGCCCATCGTCGGCGCCATCGCCGGATTCGCCGTCACCGCCGGATTTGAGATCGCCCTCGCCTGCGACATCCTAGTGGCCGGCCGCTCCGCTAAGTTCATCGACACCCACGCCAAGTTTGGGATATTCCCTTCTTGGGGTCTTTCACAGAAGCTTTCTCGTGTCATTGGACCAAATAGAGCACGGGAAGTGTCGTTAACTTGCATGCCTATCACAGCTGAAATGGCGGAGAA GTGGGGTCTTGTTAACCACATTGTGGATGATACCCAGGTGCTGAGTAAGGCAATAGAGGTCTGTGAGGCCATTGCAAGGAACAATCGCAACTTGGTTGTGTTGTATAAATCTGTTATAAATGACGGGCTCCAGCTGGACTTGGAACATGCTCGAGCTCTTGAAAAGGAAAGAGCTCA TGACTATTACAATGGTATGACAAAAGAGCAATTCGCAAGTATGCAGAAATTTATACAGGGCCGGAGTTCGAAGCCACCATCAAAGCTGTGATGATATATGTTCTGTACCACTGTATGTACCGAAAT ATCAATGTACTGTATACATCCACT GAAGTGTTCAATGACC TGAAAGAAAAATAAACACTGCCAATGTTGCATACAAAGAAAGTACCATCTTCACAT ] [+] EMBL CA755477 [ CGTCCAGATGGAGCGCTGTCGCAAGCCCATCGTCGGCGCCATCGCCGGATTCGCCGTCACCGCCGGATTTGAGATCGCCCTCGCCTGCGACATCCTAGTGGCCGGCCGCTCCGCTAAGTTCATCGACACCCACGCCAAGTTTGGGATATTCCCTTCTTGGGGTCTTTCACAGAAGCTTTCTCGTGTCATTGGACCAAATAGAGCACGGGAAGTGTCGTTAACTTGCATGCCTATCACAGCTGAAATGGCGGAGAA GTGGGGTCTTGTTAACCACATTGTGGATGATACCCAGGTGCTGAGTAAGGCAATAGAGGTCTGTGAGGCCATTGCAAGGAACAATCGCAACTTGGTTGTGTTGTATAAATCTGTTATAAATGACGGGCTCCAGCTGGACTTGGAACATGCTCGAGCTCTTGAAAAGGAAAGAGCTCA TGACTATTACAATGGTATGACAAAAGAGCAATTCGCAAGTATGCAGAAATTTATACAGGGCCGGAGTTCGAAGCCACCATCANAGCTGTGATGATATATGTTCTGGACCACTGTATGTACCGAAATNATC ATGTACTGTATACATCCACTGGAAGGGTTCAATGACC cct ] [-] EMBL BI306726 [ TCGTTAACTTGCATGCCTATCACAGCTGAAATGGCGGAGAA GTGGGGTCTTGTTAACCACATTGTGGATGATACCCAGGTGCTGAGTAAGGCAATAGAGGTCTGTGAGGCCATTGCAAGGAACAATCGCAACTTGGTTGTGTTGTATAAATCTGTTATAAATGACGGGCTCCAGCTGGACTTGGAACATGCTCGAGCTCTTGAAAAGGAAAGAGCTCA TGACTATTACAATGGTATGACAAAAGAGCAATTCGCAAGTATGCAGAAATTTATACAGGGCCGGAGTTCGAAGCCACCATCAAAGCTGTGATGATATATGTTCTGTACCACTGTATGTACCGAAAT ATCAATGTACTGTATACATCCATT GAAGTGTTCAATGACC TGAAAGAAAAATAAACACTGCCAATGTTGCATACAAAGAAAGTACCATCTTCACATGTGTTATTGGAAGAGTATCGCAGCCTATGCTGCTGTTTTCCATTC ] [-] EMBL CB967164 [ TGCATGCCTATCACAGCTGAAATGGCGGAGAACGTGGGGTCTTGTTAACCACATTGTGGATGATACCCAGGTGCTGAGTAAGGCAATAGAGGTCTGTGAGGCCATTGCAAGGAACAATCGCAACTTGGTTGTGTTGTATAAATCTGTTATAAATGACGGGCTCCAGCTGGACTTGGAACATGCTCGAGCTCTTGAAAAGGAAAGAGCTCACTGACTATTACGATGGTATGACAAAAGAGCTATTCGCAAGTATGCAGCAATTTATACCGGGCCGGAGTTCGAACCCACCATCAAAGCTGTGATGATATATGTTCTGTACCCCTGTATGTACCGACAT ATCGATGTACTGTATACATCCATT GAAGTGTTCAATGACG TGGAAGCAACATCCACCCTGCCAATGTCGCATAC AAGTAAGTACCCTCTTCACATGTGTTATTGGAAGAGTATCGCAGCCTATGCTGCTGTTTTCCATTCTGATGTTGGGCGCCGCGAGC] [-] EMBL CB966462 [ AATGACCGTGAAAGAAAAATAAACACTGCCAATGTTGCATACAAAGAAAGTACCATCTTCACATGTGTTATTGGAAGAGTATCGCAGCCTAgc ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||