These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7951#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 889 fasta sequence [CTCAATTTTAGAATTCAGAGATCCAATAACCAAAAGCAAGAACACCATGAGAGCCCCATCCTTCTTCTTCCTCTCCCTCCTCCTC-CTCCTCCTCCTCATCCACATCTCCATCCATTGCAATGCTGCAGATTCCCAGCTAGGTTCAGAGAAGGTCACCAACCTCCTCTTCTACCTGCACGACACCCTCAGTGGGAAGGATCCAACTGCTGTCCCAGTTGCTCGTGCTGAGAACGCTGTACCCAAGCCTGATAATCCGGTACCCTTCAGCACGATCTATGTGGTCGATGATCTGCTGACAGAGGGGCCTCAGAGAGAATCCAAGGTGGTTGGGAATGCGCAGGGGATGTACA-TTTCGA-CAG-CCAA-GAAA-GGGCTCACGCTT--GTTC-TTGGG--ATC-GATTTCGAGCTCACTGATGGCCCC--TACAAAGGC-AGCTC-GTTC-GTCGTGTACTCGCGGAACCCGGTCATGCAGGGGAATGGCA-GGGAGCTCGCCATTGTTGGTGGCCGTGGTTTGTTCAGGATGGCTCGAGGTTTCGCCTTGCTTCAGACTGTTTATCTGGACAACGTGAACGGCGATGCGATCATAGAGTATAATGTGACTCTCTTGCACCATTGAGTTGTTTTTTTTTTTTTGGAATAAGAGTTGAGTTGTTTTAGTTATTATGCCCGTGCTTTCCGTTGTTTGGAGCACAATAAGTGTGATCTGTGGTTGGGTTTGTCAGGTTATGTTTTCCATTTCTTTTCTTTTGTTTGTCTACTCTCCAGGAGATGGATATGTCATGGAAATTCGTAGAAATGTTTGCCTGGTTGAATCTCCATTTTGGATGTGTGGAACTGTGAATAAACATTATGTTTGCTGTTTTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK121408 [CTCAATTTTAGAATTCAGAGATCCAATAACCAAAAGCAAGAACACCATGAGAGCCCCATCCTTCTTCTTCCTCTCCCTCCTCCTC CTCCTCCTCCTCATCCACATCTCCATCCATTGCAATGCTGCAGATTCCCAGCTAGGTTCAGAGAAGGTCACCAACCTCCTCTTCTACCTGCACGACACCCTCAGTGGGAAGGATCCAACTGCTGTCCCAGTTGCTCGTGCTGAGAACGCTGTACCCAAGCCTGATAATCCGGTACCCTTCAGCACGATCTATGTGGTCGATGATCTGCTGACAGAGGGGCCTCAGAGAGAATCCAAGGTGGTTGGGAATGCGCAGGGGATGTACA TTTCGA CAG CCAA GAAA GGGCTCACGCTT GTTC TTGGG ATC GATTTCGAGCTCACTGATGGCCCC TACAAAGGC AGCTC GTTC GTCGTGTACTCGCGGAACCCGGTCATGCAGGGGAATGGCA GGGAGCTCGCCATTGTTGGTGGCCGTGGTTTGTTCAGGATGGCTCGAGGTTTCGCCTTGCTTCAGACTGTTTATCTGGACAACGTGAACGGCGATGCGATCATAGAGTATAATGTGACTCTCTTGCACCATTGAGTTGTTTTTTTTTTTTTGGAATAAGAGTTGAGTTGTTTTAGTTATTATGCCCGTGCTTTCCGTTGTTTGGAGCACAATAAGTGTGATCTGTGGTTGGGTTTGTCAGGTTATGTTTTCCATTTCTTTTCTTTTGTTTGTCTACTCTCCAGGAGATGGATATGTCATGGAAATTCGTAGAAATGTTTGCCTGGTTGAATCTCCATTTTGGATGTGTGGAACTGTGAATAAACATTATGT ] [+] EMBL C73183 [ AATAACCAAAAGCAAGAACACCATGAGAGCCCCATCCTTCTTCTTCCTCTCCCTCCTCCTC CTCCTCCTCCTCATCCACATCTCCATCCATTGCAATGCTGCAGATTCCCAGCTAGGTTCAGAGAAGGTCACCAACCTCCTCTTCTACCTGCACGACACCCTCAGTGGGAAGGATCCAACTGCTGTCCCAGTTGCTCGTGCTGAGAACGCTGTACCCAAGCCTGATAATCCGGTACCCTTCAGCACGATCTATGTGGTCGATGATCTGCTGACAGAGGGGCCTCAGAGAGAATCCAAGGTGGTTGGGAATGCGCAGGGGATGTACA TTTCGA CAG CCAA GAAA GGGCTCACGCTT GTTC TTGGG ATC GATTTCGAGCTCACTGATGGGCCC TACAAAGGC AGCTC GTTC GTCGTGTACTNGNGGAACCCGGTCATG ] [+] EMBL AU032324 [ TAACCAAAAGCAAGAACACCATGAGAGCCCCATCCTTCTTCTTCCTCTCCCTCCTCCTCNTTTCTCCTCCTCATCCACATCTCCATCCATTGCAATGCTGCAGANTCCCAGCTAGGTTCAGAGAAGGTCACCAACCTCCTCTTCTACCTGCACGACACCCTCAGTGGGAAGGATCCAACTGCTGTCCCAGTTGCTCGTGCTGAGAACGCTGTACCCAAGCCTGATAATCCGGTACCCTTCAGCACGATCTATGTGGTCGATGATCTGCTGACAGAGGGGCCTCAGAGAGAATCCAAGGTGGTTGGGAATGCGC GGGGATGTACA TTTCGA CAG CCAA GAAA GGGCTCACGCTT GTTCTTTGGG ATC GATTTCGAGCTCACTGATGGGCCC NACAAAGGC AGCNC GTTC GTCGTGTANTCGCGGAAACCGGTTATNCAGGGGGAT ] [+] EMBL AU032325 [ cagGGGGATGTACATTTTCGACCAGCCCAATGAAACGGCCTCACGCTTTGGTTC TTGGGGAATCGGATTTCGAGCTCACTGATGGCCCCCTTACAAAGGCNNGCTCGGTTCGGTCGTGTACTCGCGGAACCCGGTCATGCAGGGGAATGGCACGGGAGCTCGCCATTGTTGGTGGCCGTGG TTGTTCAGGATGGCTCGAGGTTTCGCCTTGCTTCAGACTGTTTATCTGGACAACGTGAACGGCGATGCGATCATAGAGTATAATGTGACTCTCTTGCACCATTGAGTTGTTTTTTTTTTTTTGGAATAAGAGTTGAGTTGTTTTAGTTATTATGCCCGTGCTTTCCGTTGTTTGGAGCACAATAAGTGTGATCTGTGGTTGGGTTTGTCAGGTTATGTTTTCCATTTCTTTTCTTTTGTTTGTCTACTCTCCAGGTGATGGATATGTCATGGAAATTCGTncnaaaa ] [+] EMBL AU182492 [ TGTTTTTTTTTTTTTGGAATAANAGTTGAGTTGTTTTAGTTATTATGCCCGTGCTTTCCGTTGTTTGGAGCNCAATAAGTGTGATCTGTGGTTGGGTTTGTCAGGTTATGTTTTCCATTTCTTTTCTTTTGTTTGTCCACTCNCCAGGANATGGATATGTCATGGAAATTCGTANAAATGTTTGCCTGGTTGAATCTCCATTTTGGATGTGTGGAACTGTGAATAAACATTATGTTTGCTGTTTTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||