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Oryza sativa
cluster # 7951 cluster # 7951       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7951#0 length = 889 sequences # 5  

consensusID : consensus_7951#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 889
fasta sequence
                              [CTCAATTTTAGAATTCAGAGATCCAATAACCAAAAGCAAGAACACCATGAGAGCCCCATCCTTCTTCTTCCTCTCCCTCCTCCTC-CTCCTCCTCCTCATCCACATCTCCATCCATTGCAATGCTGCAGATTCCCAGCTAGGTTCAGAGAAGGTCACCAACCTCCTCTTCTACCTGCACGACACCCTCAGTGGGAAGGATCCAACTGCTGTCCCAGTTGCTCGTGCTGAGAACGCTGTACCCAAGCCTGATAATCCGGTACCCTTCAGCACGATCTATGTGGTCGATGATCTGCTGACAGAGGGGCCTCAGAGAGAATCCAAGGTGGTTGGGAATGCGCAGGGGATGTACA-TTTCGA-CAG-CCAA-GAAA-GGGCTCACGCTT--GTTC-TTGGG--ATC-GATTTCGAGCTCACTGATGGCCCC--TACAAAGGC-AGCTC-GTTC-GTCGTGTACTCGCGGAACCCGGTCATGCAGGGGAATGGCA-GGGAGCTCGCCATTGTTGGTGGCCGTGGTTTGTTCAGGATGGCTCGAGGTTTCGCCTTGCTTCAGACTGTTTATCTGGACAACGTGAACGGCGATGCGATCATAGAGTATAATGTGACTCTCTTGCACCATTGAGTTGTTTTTTTTTTTTTGGAATAAGAGTTGAGTTGTTTTAGTTATTATGCCCGTGCTTTCCGTTGTTTGGAGCACAATAAGTGTGATCTGTGGTTGGGTTTGTCAGGTTATGTTTTCCATTTCTTTTCTTTTGTTTGTCTACTCTCCAGGAGATGGATATGTCATGGAAATTCGTAGAAATGTTTGCCTGGTTGAATCTCCATTTTGGATGTGTGGAACTGTGAATAAACATTATGTTTGCTGTTTTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK121408             [CTCAATTTTAGAATTCAGAGATCCAATAACCAAAAGCAAGAACACCATGAGAGCCCCATCCTTCTTCTTCCTCTCCCTCCTCCTC CTCCTCCTCCTCATCCACATCTCCATCCATTGCAATGCTGCAGATTCCCAGCTAGGTTCAGAGAAGGTCACCAACCTCCTCTTCTACCTGCACGACACCCTCAGTGGGAAGGATCCAACTGCTGTCCCAGTTGCTCGTGCTGAGAACGCTGTACCCAAGCCTGATAATCCGGTACCCTTCAGCACGATCTATGTGGTCGATGATCTGCTGACAGAGGGGCCTCAGAGAGAATCCAAGGTGGTTGGGAATGCGCAGGGGATGTACA TTTCGA CAG CCAA GAAA GGGCTCACGCTT  GTTC TTGGG  ATC GATTTCGAGCTCACTGATGGCCCC  TACAAAGGC AGCTC GTTC GTCGTGTACTCGCGGAACCCGGTCATGCAGGGGAATGGCA GGGAGCTCGCCATTGTTGGTGGCCGTGGTTTGTTCAGGATGGCTCGAGGTTTCGCCTTGCTTCAGACTGTTTATCTGGACAACGTGAACGGCGATGCGATCATAGAGTATAATGTGACTCTCTTGCACCATTGAGTTGTTTTTTTTTTTTTGGAATAAGAGTTGAGTTGTTTTAGTTATTATGCCCGTGCTTTCCGTTGTTTGGAGCACAATAAGTGTGATCTGTGGTTGGGTTTGTCAGGTTATGTTTTCCATTTCTTTTCTTTTGTTTGTCTACTCTCCAGGAGATGGATATGTCATGGAAATTCGTAGAAATGTTTGCCTGGTTGAATCTCCATTTTGGATGTGTGGAACTGTGAATAAACATTATGT                                             ]
[+] EMBL C73183               [                        AATAACCAAAAGCAAGAACACCATGAGAGCCCCATCCTTCTTCTTCCTCTCCCTCCTCCTC CTCCTCCTCCTCATCCACATCTCCATCCATTGCAATGCTGCAGATTCCCAGCTAGGTTCAGAGAAGGTCACCAACCTCCTCTTCTACCTGCACGACACCCTCAGTGGGAAGGATCCAACTGCTGTCCCAGTTGCTCGTGCTGAGAACGCTGTACCCAAGCCTGATAATCCGGTACCCTTCAGCACGATCTATGTGGTCGATGATCTGCTGACAGAGGGGCCTCAGAGAGAATCCAAGGTGGTTGGGAATGCGCAGGGGATGTACA TTTCGA CAG CCAA GAAA GGGCTCACGCTT  GTTC TTGGG  ATC GATTTCGAGCTCACTGATGGGCCC  TACAAAGGC AGCTC GTTC GTCGTGTACTNGNGGAACCCGGTCATG                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU032324             [                          TAACCAAAAGCAAGAACACCATGAGAGCCCCATCCTTCTTCTTCCTCTCCCTCCTCCTCNTTTCTCCTCCTCATCCACATCTCCATCCATTGCAATGCTGCAGANTCCCAGCTAGGTTCAGAGAAGGTCACCAACCTCCTCTTCTACCTGCACGACACCCTCAGTGGGAAGGATCCAACTGCTGTCCCAGTTGCTCGTGCTGAGAACGCTGTACCCAAGCCTGATAATCCGGTACCCTTCAGCACGATCTATGTGGTCGATGATCTGCTGACAGAGGGGCCTCAGAGAGAATCCAAGGTGGTTGGGAATGCGC GGGGATGTACA TTTCGA CAG CCAA GAAA GGGCTCACGCTT  GTTCTTTGGG  ATC GATTTCGAGCTCACTGATGGGCCC  NACAAAGGC AGCNC GTTC GTCGTGTANTCGCGGAAACCGGTTATNCAGGGGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU032325             [                                                                                                                                                                                                                                                                                                                                                 cagGGGGATGTACATTTTCGACCAGCCCAATGAAACGGCCTCACGCTTTGGTTC TTGGGGAATCGGATTTCGAGCTCACTGATGGCCCCCTTACAAAGGCNNGCTCGGTTCGGTCGTGTACTCGCGGAACCCGGTCATGCAGGGGAATGGCACGGGAGCTCGCCATTGTTGGTGGCCGTGG TTGTTCAGGATGGCTCGAGGTTTCGCCTTGCTTCAGACTGTTTATCTGGACAACGTGAACGGCGATGCGATCATAGAGTATAATGTGACTCTCTTGCACCATTGAGTTGTTTTTTTTTTTTTGGAATAAGAGTTGAGTTGTTTTAGTTATTATGCCCGTGCTTTCCGTTGTTTGGAGCACAATAAGTGTGATCTGTGGTTGGGTTTGTCAGGTTATGTTTTCCATTTCTTTTCTTTTGTTTGTCTACTCTCCAGGTGATGGATATGTCATGGAAATTCGTncnaaaa                                                                                                    ]
[+] EMBL AU182492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTTTTTTTTTTTTTGGAATAANAGTTGAGTTGTTTTAGTTATTATGCCCGTGCTTTCCGTTGTTTGGAGCNCAATAAGTGTGATCTGTGGTTGGGTTTGTCAGGTTATGTTTTCCATTTCTTTTCTTTTGTTTGTCCACTCNCCAGGANATGGATATGTCATGGAAATTCGTANAAATGTTTGCCTGGTTGAATCTCCATTTTGGATGTGTGGAACTGTGAATAAACATTATGTTTGCTGTTTTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_7951#0 CTCAATTTTAGAATTCAGAGATCCAATAACCAAAAGCAAGAACACCATGAGAGCCCCATC CTTCTTCTTCCTCTCCCTCCTCCTCCTCCTCCTCCTCATCCACATCTCCATCCATTGCAA TGCTGCAGATTCCCAGCTAGGTTCAGAGAAGGTCACCAACCTCCTCTTCTACCTGCACGA CACCCTCAGTGGGAAGGATCCAACTGCTGTCCCAGTTGCTCGTGCTGAGAACGCTGTACC CAAGCCTGATAATCCGGTACCCTTCAGCACGATCTATGTGGTCGATGATCTGCTGACAGA GGGGCCTCAGAGAGAATCCAAGGTGGTTGGGAATGCGCAGGGGATGTACATTTCGACAGC CAAGAAAGGGCTCACGCTTGTTCTTGGGATCGATTTCGAGCTCACTGATGGCCCCTACAA AGGCAGCTCGTTCGTCGTGTACTCGCGGAACCCGGTCATGCAGGGGAATGGCAGGGAGCT CGCCATTGTTGGTGGCCGTGGTTTGTTCAGGATGGCTCGAGGTTTCGCCTTGCTTCAGAC TGTTTATCTGGACAACGTGAACGGCGATGCGATCATAGAGTATAATGTGACTCTCTTGCA CCATTGAGTTGTTTTTTTTTTTTTGGAATAAGAGTTGAGTTGTTTTAGTTATTATGCCCG TGCTTTCCGTTGTTTGGAGCACAATAAGTGTGATCTGTGGTTGGGTTTGTCAGGTTATGT TTTCCATTTCTTTTCTTTTGTTTGTCTACTCTCCAGGAGATGGATATGTCATGGAAATTC GTAGAAATGTTTGCCTGGTTGAATCTCCATTTTGGATGTGTGGAACTGTGAATAAACATT ATGTTTGCTGTTTTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)