cluster # 7953

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Oryza sativa
cluster # 7953 cluster # 7953 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7953#0 length = 648 sequences # 5

consensusID : consensus_7953#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 648
fasta sequence

                              [CTAGGGTTTGTTCGTTGCTGCGTGCTGTGCTGTGCTTCGTCGGCGGTTGGCGNCGAGGAAGATGTCGAAGAAGAACAACCTCGCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAAGCAATG-G-AGGTCGACAAGTAACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTC-TGGTCAAGTGACCATATTCCATCTAGCCTTGG-AGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTATACGTTGGTTT-TAGAGTACCTTTGTAGTGGCAGAGCCTGGAATTAACATCTCGAACACTTTTAAAATATTAAAGTGAGATCGTTGCATTTGGAAGTAGATTTTTTGCTATTTCATGCTATTTGGATGAAACAACTACATCTGCAGCAAACTTGGCACATGTGTGAAAAA]

[+] EMBL AK121390             [CTAGGGTTTGTTCGTTGCTGCGTGCTGTGCTGTGCTTCGTCGGCGGTTGGCGGCGAGGAAGATGTCGAAGAAGAACAACCTCGCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAAGCAATG G AGGTCGACAAGTAACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTC TGGTCAAGT                                                                                                                                                                                                                                    ]
[+] EMBL C27813               [                                                   GNAGNGNAAGATGTCGAAGAAGAACAACCTCGCCAAGCGANAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAA  NATGNG AGGTCGACAAGTAACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTCTTGGTCAAGTGACCATATTCCATCTAGCCTTCG AGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTATACGTTGGTTT TAG                                                                                                                                                           ]
[+] EMBL AU100878             [                                                   gccaAGGAAGATGTCGAAGAAGANCAACCTCGCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGNCAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAAGCAATG G AGGTCGACAAGTAACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTC TGGTCAAGTGACCATATTCCATCTAGCCTTGGCAGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTATACGTTGGTTTGTAGAGTACCTTTGTAGTGGCAGAGCCTGGAATTAACATCTCGAACACTTTTAAAATATTAAAGTGAGATCGTTGCATTTGGAAGTAGATTTTTTGCTATTTCATGCTATTTGGATGAAACAACTACATCTGCAGCAAACTTGGCACATGTGTGAAAAA]
[+] EMBL AU160993             [                                                     cnAGGAAGATGTCGAAGAAGANCAACCTCGCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTNATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAAGCAATG G AGGTCGACAAGTAACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTC TGGTCAAGTGACCATATTCCATCTAGCCTTGGCAGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTATACGTTGGTTTGTAGAGTACCTTTGTAGTGGCAGAGCCTGGAATTAACATCTCGAACACTTTTAAAATATTAAAGTGAGATCGTTGCATTTGGAAGTAGATTTTTTGCTATTTCATGCTATTTGGATGAAACAACTACATCTGCAGCAAACTTGGCACATGTGTGAAAAA]
[+] EMBL C27812               [                                                    nanggnAAGATGTCGAAGAAGAACAACCTCGCCAAGC GAAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCG AA NATNG GAAGGTCGACAAGTAACTTGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTC TGGTCAAGTGA CATATTCCATCTAGCCTTGG AGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTATACCTTGGTTT TAGg                                                                                                                                                          ]




>consensus_7953#0
CTAGGGTTTGTTCGTTGCTGCGTGCTGTGCTGTGCTTCGTCGGCGGTTGGCGNCGAGGAA
GATGTCGAAGAAGAACAACCTCGCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAAAG
GGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAA
GATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAA
GACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAAGCAATGGAGGTCGACAAGTA
ACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGA
TATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTCTGGTCAA
GTGACCATATTCCATCTAGCCTTGGAGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTAT
ACGTTGGTTTTAGAGTACCTTTGTAGTGGCAGAGCCTGGAATTAACATCTCGAACACTTT
TAAAATATTAAAGTGAGATCGTTGCATTTGGAAGTAGATTTTTTGCTATTTCATGCTATT
TGGATGAAACAACTACATCTGCAGCAAACTTGGCACATGTGTGAAAAA

clustalw multiple alignements is not computed in this case