These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7979#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3167 fasta sequence [CGTCCCCCGCTCCTCCTCCCCCACCTTCGTCGCCTCCTCTTCCCCCTCCTCCCCCGCCGCCGCCGCGCCCCCTCCTCGCCGCCGCCGCCGCCTGCATCCCGACGGAGGGCCGCCGCGGCCGCCGCCATGGCGGGCGCCGGCGACCCCGTGGCCGCTGCTGCGGTGGCGGCGGCGTCGTCGTCGGCTGGCGCGGCCGCCGCCTCCTTCCGGCTCGGGATGGTGCGGGTGGTCTCGTTCCTCGTCGGGGGCCTCAACGTGGCCGTGCTGCTGCTCGGGCTCTACCTCATCGACGGCGTGCTCCCACCGGGGTGCGGCGGGGGGCTCGCGCTCGCCGCGGCGCCCGCGCTGGCGGGGATCCGCGTGCTCGCCATGATCGGCACCGCGCGCGCGCAGCACGCCACGGCGGATGCCATCGCGAGGCGCCACCTCGACGAGGCCGCAGCGTCGGTCGCCGCTGACGCCGTTGCGCGCCACGAGATCAGGGTGAGGTATAAACGCTGGTTGTGGTGGACTAGATTCGGCATGGCAGTGGGTGCAATGCAATTGGTTGGGGCAATTTATCTCATGCTTGTCATTGTCAGAGATATTTCAAATGAAAGAAGAGCCACTTCCTGTTTCTTTGGACAGGATGAAGCTGATCATGTCTCGAAACGAGCATTAATTGCTTTGTTTCTTATTCTTTCCTGGGTTGTGGTCGTTGTCCAATGCTTCACGGGTTCTGATATATTAAGGTGGAGGTCGTTCTATGCAACACATGACATGGCATGGAAAGCTCATTACAGGGAAGTGTTCGATCATGGAATTCGAGAAGCTTTATGCTGCCTAGGGCGTGCAAAGTATCTAACCGTATTGGAAGAGGATGAGGTTTACTCTGTGGCAAGACTTCTGGGTGATTTGGTTGCATATCGTGCTTCTGGGACAGGACATTTGGAACTTTTAGCAGGGCTTGCACTATTACAGAAAAATGAAAATTTGCCTCATTTGCAAACTGACCTTACGGAAGCGCCACTGAGCCTTATGCAAGAAGCTGCTATCCTTCATCCCTTTGCTGAAGCATGTTACACGGGACCTCTCCTTGATGTTGGGAGAAACCCTATTTTGTTTCCATGTGCATGGGTTTACAGACAAGGTGTTTTAACTCCATGGTCGCGCAGAAGGCGCCCTGCACTTGATGGTGACAACTGGTGGCGAGGGCATGCTGCCGCTTTCCTTCGATTTGTTCACATACCAGCTGCAGCACTTCTACGGGGCCGTGTTTGCCAGAGCAAGAGGGAAGCTGCTTACTTTGTCGTGGTCCTCCATGACAAAAAGACAGTTGTTATTGGAGTTCGTGGAACTGAAACACCAGAAGATCTCATAACCGATGGATTATGCAGAGAATGTGCATTTACTATGGAGGATTTGGATGGACTAGTAAAATGTGAACAGTTACCTGCAACTACAAGGGAGAGAGTTATTTCTACCTTTCCGCATTATGGACATGGTGGAATTCTAGAGTCCGCCAGGGAGCTTTTCATGCAACTCAACGACTGCACAGGAGATAATTCGTCATCCCTAACAGTTGGATTTCTTCCTGCACTGGTGGGGGAAGGCAGTGAATGCCATGGATATAAAATTCGAGTTGTTGGGCATTCTTTAGGGGGTTCTGTTGCTACAGTTCTTGGAATGATGCTTTTTGGCAGGTATCCAAACGTGCATGTATATGCATACGGACCACTACCTTGTGTGGACTTTGTAATAGCTGAAGCCTGTTCGCAATTTGTTACAACCATTGTGTGCAATGATGAGTTTTCTTCTCGCCTTTCAATCAACTCAATTCTGAGGCTGCGGTCTGCTGCAATAAGGGCTCTTTCAGATAACTCTCCAGCTGATACAGCAATGATACAGAAACTTGCTCGCAGAATTTTGAATGTTAACAAGTATCATGATAATGGTCCTGATGGTGGCATAATGGAGGACTATAGTGCTAGGCACCACACATTTGAAGGGAGGGCAGTATCTACTGAACGACGGTTTCCTCACCAGGATGCACCTTGTACTTCTGAGCCAGACCTCCCAATTTTGCAAAATGGCATCAATGGGTATAATGGGTCTAATTCATCCATAGATGTTATGAGCTCTCAGGGTCTACATACTGATTGTGATGCCCAGACAATTTCCCTTCATGGGCTCGATTCTGGTTCAGAACAGCGTCACACATCTTATAGGGATATACCAGTTGAGCCTCCTGAAATGTTTCTTCCAGGCCTAGTTGTTCATATAGAGCGGCAAAGAAGAAGCCTCTTCCCTCTTTGGAAATGCTGGAGCTTGCAGGGAAGTGAACCACCATATAAAGCTTTTTTTGCAAAAAGGGAGAACTTCACTGATCTTGCCGTTACTCCTTCGATGTTTACGGATCACCTACCATGGAGGTGTCACTATGCAATGCAGAGAGTTCTGGAAGCACAAACGGCAGCAA-GTTGTCCTGATTCACCGGTAGAACGTTTGGTCTGACCAGGAGTCCAGGATAGAGTTGTTCTCAGTACAGCTGAAAGCAAATAGAGAGAATGTATATGAATGCCACTTTAGGAGCAATGCAGCTTCACTGAAGACTGAAGGAGCAAAATTTTCACATGCTGCCAGCATATTTCTATGGAAAGCAGTTATGTCTGTTTACATGAGATCTCTGTGACGACAGCTCTACATTCCGCTGAGCTTACTGACAGTCCTAGACTGGCTAGGCAGGCACCGGACGCATGGATCAAAAGAAATCTGACGACTTCATATACAGCAAAGCAACATCTTATTTCTATCTACCTACCTACCTTGGCAATGCCTTGTGCGTGTACATT--TCATCTAGTGCAGGCCTACACCCTGATAGTAGCGGTTTGTTCTCATTCTTTATTCTGCAGCCATTCCTGCTTGTTCATATCCATTTTTTAATTTGTGCAAGTTAACATGATGTACATATTCACACGTGTTAGCTAGATTGACTGATTGACAAGTGAAAATTTAAATGTGAATATTTAACACCGAGATCAACTAAGATGGTTACGACATTTTTTTTCCACTGTCCAGCATTTTCTTATCCAATACTGCATTCATTCAGAGATGTAAAGGTATACAGTCTGATGATGTTTGTTGATTAATATATGGCTCGTGCCCCTGTTTATTCAAAAAAAAAAAAA] [+] EMBL AK120849 [CGTCCCCCGCTCCTCCTCCCCCACCTTCGTCGCCTCCTCTTCCCCCTCCTCCCCCGCCGCCGCCGCGCCCCCTCCTCGCCGCCGCCGCCGCCTGCATCCCGACGGAGGGCCGCCGCGGCCGCCGCCATGGCGGGCGCCGGCGACCCCGTGGCCGCTGCTGCGGTGGCGGCGGCGTCGTCGTCGGCTGGCGCGGCCGCCGCCTCCTTCCGGCTCGGGATGGTGCGGGTGGTCTCGTTCCTCGTCGGGGGCCTCAACGTGGCCGTGCTGCTGCTCGGGCTCTACCTCATCGACGGCGTGCTCCCACCGGGGTGCGGCGGGGGGCTCGCGCTCGCCGCGGCGCCCGCGCTGGCGGGGATCCGCGTGCTCGCCATGATCGGCACCGCGCGCGCGCAGCACGCCACGGCGGATGCCATCGCGAGGCGCCACCTCGACGAGGCCGCAGCGTCGGTCGCCGCTGACGCCGTTGCGCGCCACGAGATCAGGGTGAGGTATAAACGCTGGTTGTGGTGGACTAGATTCGGCATGGCAGTGGGTGCAATGCAATTGGTTGGGGCAATTTATCTCATGCTTGTCATTGTCAGAGATATTTCAAATGAAAGAAGAGCCACTTCCTGTTTCTTTGGACAGGATGAAGCTGATCATGTCTCGAAACGAGCATTAATTGCTTTGTTTCTTATTCTTTCCTGGGTTGTGGTCGTTGTCCAATGCTTCACGGGTTCTGATATATTAAGGTGGAGGTCGTTCTATGCAACACATGACATGGCATGGAAAGCTCATTACAGGGAAGTGTTCGATCATGGAATTCGAGAAGCTTTATGCTGCCTAGGGCGTGCAAAGTATCTAACCGTATTGGAAGAGGATGAGGTTTACTCTGTGGCAAGACTTCTGGGTGATTTGGTTGCATATCGTGCTTCTGGGACAGGACATTTGGAACTTTTAGCAGGGCTTGCACTATTACAGAAAAATGAAAATTTGCCTCATTTGCAAACTGACCTTACGGAAGCGCCACTGAGCCTTATGCAAGAAGCTGCTATCCTTCATCCCTTTGCTGAAGCATGTTACACGGGACCTCTCCTTGATGTTGGGAGAAACCCTATTTTGTTTCCATGTGCATGGGTTTACAGACAAGGTGTTTTAACTCCATGGTCGCGCAGAAGGCGCCCTGCACTTGATGGTGACAACTGGTGGCGAGGGCATGCTGCCGCTTTCCTTCGATTTGTTCACATACCAGCTGCAGCACTTCTACGGGGCCGTGTTTGCCAGAGCAAGAGGGAAGCTGCTTACTTTGTCGTGGTCCTCCATGACAAAAAGACAGTTGTTATTGGAGTTCGTGGAACTGAAACACCAGAAGATCTCATAACCGATGGATTATGCAGAGAATGTGCATTTACTATGGAGGATTTGGATGGACTAGTAAAATGTGAACAGTTACCTGCAACTACAAGGGAGAGAGTTATTTCTACCTTTCCGCATTATGGACATGGTGGAATTCTAGAGTCCGCCAGGGAGCTTTTCATGCAACTCAACGACTGCACAGGAGATAATTCGTCATCCCTAACAGTTGGATTTCTTCCTGCACTGGTGGGGGAAGGCAGTGAATGCCATGGATATAAAATTCGAGTTGTTGGGCATTCTTTAGGGGGTTCTGTTGCTACAGTTCTTGGAATGATGCTTTTTGGCAGGTATCCAAACGTGCATGTATATGCATACGGACCACTACCTTGTGTGGACTTTGTAATAGCTGAAGCCTGTTCGCAATTTGTTACAACCATTGTGTGCAATGATGAGTTTTCTTCTCGCCTTTCAATCAACTCAATTCTGAGGCTGCGGTCTGCTGCAATAAGGGCTCTTTCAGATAACTCTCCAGCTGATACAGCAATGATACAGAAACTTGCTCGCAGAATTTTGAATGTTAACAAGTATCATGATAATGGTCCTGATGGTGGCATAATGGAGGACTATAGTGCTAGGCACCACACATTTGAAGGGAGGGCAGTATCTACTGAACGACGGTTTCCTCACCAGGATGCACCTTGTACTTCTGAGCCAGACCTCCCAATTTTGCAAAATGGCATCAATGGGTATAATGGGTCTAATTCATCCATAGATGTTATGAGCTCTCAGGGTCTACATACTGATTGTGATGCCCAGACAATTTCCCTTCATGGGCTCGATTCTGGTTCAGAACAGCGTCACACATCTTATAGGGATATACCAGTTGAGCCTCCTGAAATGTTTCTTCCAGGCCTAGTTGTTCATATAGAGCGGCAAAGAAGAAGCCTCTTCCCTCTTTGGAAATGCTGGAGCTTGCAGGGAAGTGAACCACCATATAAAGCTTTTTTTGCAAAAAGGGAGAACTTCACTGATCTTGCCGTTACTCCTTCGATGTTTACGGATCACCTACCATGGAGGTGTCACTATGCAATGCAGAGAGTTCTGGAAGCGCAAACGGCAGCAA GTTGTCCTGATTCACCGGTAGAACGTTTGGTCTGACCAGGAGTCCAGGATAGAGTTGTTCTCAGTACAGCTGAAAGCAAATAGAGAGAATGTATATGAATGCCACTTTAGGAGCAATGCAGCTTCACTGAAGACTGAAGGAGCAAAATTTTCACATGCTGCCAGCATATTTCTATGGAAAGCAGTTATGTCTGTTTACATGAGATCTCTGTGACGACAGCTCTACATTCCGCTGAGCTTACTGACAGTCCTAGACTGGCTAGGCAGGCACCGGACGCATGGATCAAAAGAAATCTGACGACTTCATATACAGCAAAGCAACATCTTATTTCTATCTACCTACCTACCTTGGCAATGCCTTGTGCGTGTACATTGATCATCTAGTGCAGGCCTACACCCTGATAGTAGCGGTTTGTTCTCATTCTTTATTCTGCAGCCATTCCTGCTTGTTCATATCCATTTTTTAATTTGTGCAAGTTAACATGATGTACATATTCACACGTGTTAGCTAGATTGACTGATTGACAGGTGAAAATTTAAATGTGAATATTTAACACCGAGATCAACTAAGATGGTTACGACATTTTTTTTCCACTGTCCAGCATTTTCTTATCCAATACTGCATTCATTCAGAGATGTAAAGGTATACAGTCTGATGATGTTTGTTGATTAATATATG ] [+] EMBL CB632856 [ AGCATTAATTGCTTTGTTTCTTATTCTTTCCTGGGTTGTGGTCGTTGTCCAATGCTTCACGGGTTCTGATATATTAAGGTGGAGGTCGTTCTATGCAACACATGACATGGCATGGAAAGCTCATTACAGGGAAGTGTTCGATCATGGAATTCGAGAAGCTTTATGCTGCCTAGGGCGTGCAAAGTATCTAACCGTATTGGAAGAGGATGAGGTTTACTCTGTGGCAAGACTTCTGGGTGATTTGGTTGCATATCGTGCTTCTGGGACAGGACATTTGGAACTTTTAGCAGGGCTTGCACTATTACAGAAAAATGAAAATTTGCCTCATTTGCAAACTGACCTTACGGAAGCGCCACTGAACCTTATGCAAGAAGCTGCTATCCTTCATCCCTTTGCTGAAGCATGTTACACGGGACCTCTCCTTGATGTTGGGAGAAACCCTATTTTGTTTCCATGTGCATGGGTTTACAGACAAGGTGTTTTAACTCCATGGTCGCGCAGAAGGCGCCCTGCACTTGATGGTGACAACTGGTGGCGAGGGCATGCTGCCGCTTTCCTTCGATTTGTTCACATACCAGCTGCAGCACTTCTACGGGGCCGTGTTTGCCAGAGCAAGAGGGAAGCTGCTTACTTTGTCGTGGTCCTCCATGACAAAAAGACAGTTGTTATTGGAGTTCGTGGAACCGAAACACCAGAAGATCTCATAACCGATGGATTATGCAGAGAATGTGCATTTACTATGGAGGATTTGGATGGACTAGTAAAATGTGAACAGTTACCTGCAACTACAAGGGAGAGAGTTATTTCTACCTTTCCGCATTATGGACATGGTGGAATTCTAGAGTCCCGCAGGGAGCTTTT ] [-] EMBL CA305712 [ GACCTCCCAATTTTGCAAAATGGCATCAATGGGTATAATGGGTCTAATTCATCCATAGATGTTATGAGCTCTCAGGGTCTACATACTGATTGTGATGCCCAGACGATTTCCCTTCATGGGCTCGATTCTGGTTCAGAACAGCGTCACACATCTTATAGGGATATACCAGTTGAGCCTCCTGAAATGTTTCTTCCAGGCCTAGTTGTTCATATAGTGCGGCAAAGAAGAAGCCTCTTCCCTCTTTGGAAATGCTGGAGCTTGCAGGGAAGTGAACCACCATATAAAGCTTTTTTTGCAAAAAGGGAGAACTTCACTGATCTTGCCGTTACTCCTTCGATGTTTACGGATCACCTACCATGGAGGTGTCACTATGCAATGCAGAGAGTTCTGGAAGCACAAACGGCAGCAANGTTGTCCTGATTCACCGGTAGAACGTTTGGTCTGACCAGGAGTCCAGGATAGAGTT ] [-] EMBL CB632857 [ GGAGCTTGCAGGGAAGTGAACCACCATATAAAGCTTTTTTTGCAAAAAGGGAGAACTTCACTGATCTTGCCGTTACTCCTTCGATGTTTACGGATCACCTACCATGGAGGTGTCACTATGCAATGCAGAGAGTTCTGGAAGCACAAACGGCAGCAA GTTGTCCTGATTCACCGGTAGAACGTTTGGTCTGACCAGGAGTCCAGGATAGAGTTGTTCTCAGTACAGCTGAAAGCAAATAGAGAGAATGTATATGAATGCCACTTTAGGAGCAATGCAGCTTCACTGAAGACTGAAGGAGCAAAATTTTCACATGCTGCCAGCATATTTCTATGGAAAGCAGTTATGTCTGTTTACATGAGATCTCTGTGACGACAGCTCTACATTCCGCTGAGCTTACTGACAGTCCTAGACTGGCTAGGCAGGCACCGGACGCATGGATCAAAAGAAATCTGACGACTTCATATACAGCAAAGCAACATCTTATTTCTATCTACCTACCTACCTTGGCAATGCCTTGTGCGTGTACA T TCATCTAGTGCAGGCCTACACCCTGATAGTAGCGGTTTGTTCTCATTCTTTATTCTGCAGCCATTCCTGCTTGTTCATATCCATTTTTTAATTTGTGCAAGTTAACATGATGGGCATATTCACACGTGTTAGCTAGATTGACTGATTGACAAGTGAAAATTTAAATG ] [-] EMBL CA760459 [ CAGTACAGCTGAAAGCAAATAGAGAGAATGTATATGAATGCCACTTTAGGAGCAATGCAGCTTCCCTGAAGACTGAAGGAGCAAAATTTTCACATGCTGCCAGCATATTTTTATGGAAAGCAGTTATGTCTGTTTACATGAGATCTCTGTGACGACAGCTTTACATTCCGCTGAGCTTACTGACAGTCCTAGACTGGCTAGGCAGGCACCGGACGCATGGAGCAAAAGAAATCTGACGACTTTATATACAGCAAAGCAACATTTTATTTCTATCTACCTACCTACCTTGGCAATGCCTTGTGCGTGTACATT T ATCTAGTGCAGGCCTACACCCTGATAGTAGCGGTTTGTTCTCATTCTTTATTCTGCAGCCATTCCTGCTTGTTTATATCCATTTTTTAATTTGTGCAAGTTAACCTGATGTACATATTCACACGTGTTAGCTAGATTGACTGATTGACAAGTGAAAATTTAAATGTGAATATTTAACCCCGAGATCAACTAAGATGGTTACGACATTTTTTTTCCCCTGTCCAGCATTTTTTTATCCAATACTGCATTCATTTAGAGATGTAAAGGTATACAGTCTGATGATGTTTGTTGATTAATATATGGCTCGTGCCCCTGTTTATTCAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||