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Oryza sativa
cluster # 7981 cluster # 7981       Sequences # 5       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7981#0 length = 1998 sequences # 2  
 consensus_7981#1 length = 1467 sequences # 2  
consensus_7981#2 length = 1203 sequences # 1  
consensusID : consensus_7981#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1998
fasta sequence 
                              [CCTTCTAGAGCGTTCCGGATCCACCGGCCATGGCGGCCGCGGGGAGCGCGGGGTCCTCGCCGCCGCCGCCGCCGGGGCAGCTGGGGACGCTGTGGTCGACGCTGGAGGACCAGCGCGGCGGGGCGCGGGAGGTGCCCCTGCTGTCGTCGGCGTGGGGCCTGCCGGGCGGCGGGAGGGGCGGGGACGGGGGCGGGGGCGGGGAAGGGGGTGGGTGGAAGGAGGGCTTGGTCCGGCGTGCCGGCGCCGCGGCGGCGCGCGTGTGGGGCGCCGTGCGCGGCGCGGCGGAGGAGCTGTGGGCGTTCGCGCGGGCCGACCCGCGGAAGGCCGTGTTCGCGGCCAAGGTCGGCCTGGCGCTGGCGCTCATCTCGCTGCTGGTGTTCCTCCGTGAGCCCCGCGACATCGTCAGCCACTCCGTCTGGGCCATCCTCACCGTCGTCGTCGTCTTCGAGTTCAGCATCGGTGCAACATTTAGCAAAGGTTTTAATAGGGGATTGGGTACCCTTACCGCTGGAGGGCTTGCGCTAGCAGTCGCGGAATTGTCCAAACACCTGGGAAAGCTGGAGGAAGTAATTCTTATAATTAGCATATTTATTGTTGCTTTTTTCACAACCTTGACGAAACTGCATCCAAAAATGAAGGCCTATGAGTATGGGTTCCGCGTATTCTTGTTGACATTCTGCTATGTCATGGTTTCTGGGTACAACACAGGGAAGTTCACTGATACGGCTGTGAGTAGATTTATATTAATTGCTATTGGTGCTGCTGTCAGTCTAGGAATCAATGTAGGTATTTACCCAATATGGGCTGGACAAGATTTGCACAATTTGGTTGCAAAAAACTTCATTGGTGTTGCAAAATCCTTGGAAGGTTGCGTTGATGGATATTTGAAATGCATGGAGTATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGTGGCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATATGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAAGTTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTTTCCGAAATTCAGAAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTTGGTATAGAAGGTGCAAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAATTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGGATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCCGAAGGTATCAAAGAAGTTCTGAATGGCACTGGCATTATGGGAAAGGAAAACAAGATCGAAGTGAAGGAGCCTACAATTGTTGAACAAACTACAGCGCATCATTCAAAAAGCTTTGCTGTTAATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAGATTTCAAGTTACTGTCTTGGCCTGCTCGAAGATCATTCCATCCAAATCTGCCACTTGAAGACGAGGAAACAAAAACATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTCCCTTCTAATCGAGTTTGTTGCCCGACTACAGAACGTTGTTAATGCATTTCAAGAGTTGAGTGATAAGGCTAACTTCAAAGAGCCTGTGCAGGAGCCTGTTGCAGTTAGTACTAGTGATGGCGGCTTTCTCCATAAAATATGCAAATTCGTCGGAATCAAGAGTTAACATCGCAAATGACCCTACTAGTTTCATCTGAAACCTTGTTATTC-TTTTTTTTTTTTCAATACAGTTTTGTTTAAGAATTACGAACCACGAAATGTGTATAAATTCTACACTTGTGTATATGCAATGAGAATATTGCAAGCTTTATTTTTGAATGGAGCTCCAGTTTGCTACCAAAAAAAAAAAGG]

[+] EMBL AK120796             [CCTTCTAGAGCGTTCCGGATCCACCGGCCATGGCGGCCGCGGGGAGCGCGGGGTCCTCGCCGCCGCCGCCGCCGGGGCAGCTGGGGACGCTGTGGTCGACGCTGGAGGACCAGCGCGGCGGGGCGCGGGAGGTGCCCCTGCTGTCGTCGGCGTGGGGCCTGCCGGGCGGCGGGAGGGGCGGGGACGGGGGCGGGGGCGGGGAAGGGGGTGGGTGGAAGGAGGGCTTGGTCCGGCGTGCCGGCGCCGCGGCGGCGCGCGTGTGGGGCGCCGTGCGCGGCGCGGCGGAGGAGCTGTGGGCGTTCGCGCGGGCCGACCCGCGGAAGGCCGTGTTCGCGGCCAAGGTCGGCCTGGCGCTGGCGCTCATCTCGCTGCTGGTGTTCCTCCGTGAGCCCCGCGACATCGTCAGCCACTCCGTCTGGGCCATCCTCACCGTCGTCGTCGTCTTCGAGTTCAGCATCGGTGCAACATTTAGCAAAGGTTTTAATAGGGGATTGGGTACCCTTACCGCTGGAGGGCTTGCGCTAGCAGTCGCGGAATTGTCCAAACACCTGGGAAAGCTGGAGGAAGTAATTCTTATAATTAGCATATTTATTGTTGCTTTTTTCACAACCTTGACGAAACTGCATCCAAAAATGAAGGCCTATGAGTATGGGTTCCGCGTATTCTTGTTGACATTCTGCTATGTCATGGTTTCTGGGTACAACACAGGGAAGTTCACTGATACGGCTGTGAGTAGATTTATATTAATTGCTATTGGTGCTGCTGTCAGTCTAGGAATCAATGTAGGTATTTACCCAATATGGGCTGGACAAGATTTGCACAATTTGGTTGCAAAAAACTTCATTGGTGTTGCAAAATCCTTGGAAGGTTGCGTTGATGGATATTTGAAATGCATGGAGTATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGTGGCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATATGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAAGTTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTTTCCGAAATTCAGAAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTTGGTATAGAAGGTGCAAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAATTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGGATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCCGAAGGTATCAAAGAAGTTCTGAATGGCACTGGCATTATGGGAAAGGAAAACAAGATCGAAGTGAAGGAGCCTACAATTGTTGAACAAACTACAGCGCATCATTCAAAAAGCTTTGCTGTTAATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAGATTTCAAGTTACTGTCTTGGCCTGCTCGAAGATCATTCCATCCAAATCTGCCACTTGAAGACGAGGAAACAAAAACATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTCCCTTCTAATCGAGTTTGTTGCCCGACTACAGAACGTTGTTAATGCATTTCAAGAGTTGAGTGATAAGGCTAACTTCAAAGAGCCTGTGCAGGAGCCTGTTGCAGTTAGTACTAGTGATGGCGGCTTTCTCCATAAAATATGCAAATTCGTCGGAATCAAGAGTTAACATCGCAAATGACCCTACTAGTTTCATCTGAAACCTTGTTATTC TTTTTTTTTTTTCAATACAGTTTTGTTTAAGAATTACGAACCACGAAATGTGTATAAATTCTACACTTGTGTATATGCAATGAGAATATTGCAAGCTTTATTTTTGAATGGAGCTCCA                       ]
[-] EMBL CB683438             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAATTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGGATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCCGAAGGTATCAAAGAAGTTCTGAATGGCACTGGCATTATGGGAAAGGAAAACAAGATCGAAGTGAAGGAGCCTACAATTGTTGAACAAACTACAGCGCATCATTCAAAAAGCTTTGCTGTTAATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAGATTTCAAGTTACTGTCTTGGCCTGCTCGAAGATCATTCCATCCAAATCTGCCACTTGAAGACGAGGAAACAAAAACATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTCCCTTTTAATCGAGTTTGTTGCCCGACTACAGAACGTTGTTAATGCATTTCAAGAGTTGAGTGATAAGGCTAACTTCAAAGAGCCTGTGCAGGAGCCTGTTGCAGTTAGTACTAGTGATGGCGGCTTTCTCCATAAAATATGCAAATTCGTCGGAATCAAGAGTTAACATCGCAAATGACCCTACTAGTTTCATCTGAAACCTTGTTATTCTTTTTTTTTTTTTCAATACAGTTTTGTTTAAGAATTACGAACCACGAAATGTGTATAAATTCTACACTTGTGTATATGCAATGAGAATATTGCGAGCTTTATTTTTGAATGGAGCTCCAGTTTGCTACCAAAAAAAAAAAGG]




>consensus_7981#0
CCTTCTAGAGCGTTCCGGATCCACCGGCCATGGCGGCCGCGGGGAGCGCGGGGTCCTCGC
CGCCGCCGCCGCCGGGGCAGCTGGGGACGCTGTGGTCGACGCTGGAGGACCAGCGCGGCG
GGGCGCGGGAGGTGCCCCTGCTGTCGTCGGCGTGGGGCCTGCCGGGCGGCGGGAGGGGCG
GGGACGGGGGCGGGGGCGGGGAAGGGGGTGGGTGGAAGGAGGGCTTGGTCCGGCGTGCCG
GCGCCGCGGCGGCGCGCGTGTGGGGCGCCGTGCGCGGCGCGGCGGAGGAGCTGTGGGCGT
TCGCGCGGGCCGACCCGCGGAAGGCCGTGTTCGCGGCCAAGGTCGGCCTGGCGCTGGCGC
TCATCTCGCTGCTGGTGTTCCTCCGTGAGCCCCGCGACATCGTCAGCCACTCCGTCTGGG
CCATCCTCACCGTCGTCGTCGTCTTCGAGTTCAGCATCGGTGCAACATTTAGCAAAGGTT
TTAATAGGGGATTGGGTACCCTTACCGCTGGAGGGCTTGCGCTAGCAGTCGCGGAATTGT
CCAAACACCTGGGAAAGCTGGAGGAAGTAATTCTTATAATTAGCATATTTATTGTTGCTT
TTTTCACAACCTTGACGAAACTGCATCCAAAAATGAAGGCCTATGAGTATGGGTTCCGCG
TATTCTTGTTGACATTCTGCTATGTCATGGTTTCTGGGTACAACACAGGGAAGTTCACTG
ATACGGCTGTGAGTAGATTTATATTAATTGCTATTGGTGCTGCTGTCAGTCTAGGAATCA
ATGTAGGTATTTACCCAATATGGGCTGGACAAGATTTGCACAATTTGGTTGCAAAAAACT
TCATTGGTGTTGCAAAATCCTTGGAAGGTTGCGTTGATGGATATTTGAAATGCATGGAGT
ATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGTG
GCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATAT
GGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAAG
TTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTTT
CCGAAATTCAGAAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTTGGTATAGAAGG
TGCAAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAATTGAGCTCTTC
AGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGGATTGATGAGAA
GTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCCGAAGGTATCAA
AGAAGTTCTGAATGGCACTGGCATTATGGGAAAGGAAAACAAGATCGAAGTGAAGGAGCC
TACAATTGTTGAACAAACTACAGCGCATCATTCAAAAAGCTTTGCTGTTAATTCATTTCT
GAGCAGACATGATTCATCATCAACTGTAGATTTCAAGTTACTGTCTTGGCCTGCTCGAAG
ATCATTCCATCCAAATCTGCCACTTGAAGACGAGGAAACAAAAACATATGAAAGTGCAAG
TGCTCTGTCCTTGGCCACATTTGCCTCCCTTCTAATCGAGTTTGTTGCCCGACTACAGAA
CGTTGTTAATGCATTTCAAGAGTTGAGTGATAAGGCTAACTTCAAAGAGCCTGTGCAGGA
GCCTGTTGCAGTTAGTACTAGTGATGGCGGCTTTCTCCATAAAATATGCAAATTCGTCGG
AATCAAGAGTTAACATCGCAAATGACCCTACTAGTTTCATCTGAAACCTTGTTATTCTTT
TTTTTTTTTCAATACAGTTTTGTTTAAGAATTACGAACCACGAAATGTGTATAAATTCTA
CACTTGTGTATATGCAATGAGAATATTGCAAGCTTTATTTTTGAATGGAGCTCCAGTTTG
CTACCAAAAAAAAAAAGG

consensusID : consensus_7981#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1467
fasta sequence 
                              [AGCTCTGGGCGTTCGCGCGGGCCGACCCGCGGAAGGCCGTGTTCGCGGCCAAGGTCGGCCTGGCGCTGGCGCTCATCTCGCTGCTGGTGTTCCTCCGTGAGCCCCGCGACATCGTCAGCCACTCCGTCTGGGCCATCCTCACCGTCGTCGTCGTCTTCGAGTTCAGCATCGGTGCAACATTTAGCAAAGGTTTTAATAGGGGATTGGGTACCCTTACCGCTGGAGGGCTTGCGCTAGCAGTCGCCGAATTGTCCAAACACCTGGGAAAGCTGGAGGAAGTAATTCTTATAATTAGCATATTTATTGTTGCTTTTTTCACAACCTTGACGAAACTGCATCCAAAAATGAAGGCCTATGAGTATGGGTTCCGCGTATTCTTGTTGACATTCTGCTATGTCATGGTTTCTGGGTACAACACAGGGAAGTTCACTGATACGGCTGTGAGTAGATTTATATTAATTGCTATTGGTGCTGCTGTCAGTCTAGGAATCAATGTTGCGTTGATGGATATTTGAAATGCATGGAGTATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGTGGCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATATGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAAGTTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTTTCCGAAATTCAGGCACCACCAGAAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTTGGTATAGAAGGTGCAAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAATTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGGATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCCGAAGGTATCAAAGAAGTTCTGAATGGCACCGGCATTACGGGAAAGGAAAACAAGATCGAAGTGAAGGAGCCTACAGTTGTTGAACAAACTACAGCGCATCATTCAAAAAGCTTTGCTGTTAATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAGACAATTTCAAGNTACTGTCTTGGCCTGCTCGAAGATCATTCCATCCAAACCTGCCACTTGGAAGACGAGGAAACAAAAACATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTNCCTTCTAATCGAGNTTGNTGNCCGACTACAGAATGGTGGTAATGCATTTCAAGAGNTGAGNGATAAGGCTAACTTCAAAGAGCCTGGGCAGGAGCCTGGTGCAGTTAGNACTAGGGATGGCGGCTTTTTCCATAAAAATGCNAATTCGTCGGAATCAAAAGTTACATCGCAAATGACCC]

[+] EMBL CB683882             [AGCTCTGGGCGTTCGCGCGGGCCGACCCGCGGAAGGCCGTGTTCGCGGCCAAGGTCGGCCTGGCGCTGGCGCTCATCTCGCTGCTGGTGTTCCTCCGTGAGCCCCGCGACATCGTCAGCCACTCCGTCTGGGCCATCCTCACCGTCGTCGTCGTCTTCGAGTTCAGCATCGGTGCAACATTTAGCAAAGGTTTTAATAGGGGATTGGGTACCCTTACCGCTGGAGGGCTTGCGCTAGCAGTCGCCGAATTGTCCAAACACCTGGGAAAGCTGGAGGAAGTAATTCTTATAATTAGCATATTTATTGTTGCTTTTTTCACAACCTTGACGAAACTGCATCCAAAAATGAAGGCCTATGAGTATGGGTTCCGCGTATTCTTGTTGACATTCTGCTATGTCATGGTTTCTGGGTACAACACAGGGAAGTTCACTGATACGGCTGTGAGTAGATTTATATTAATTGCTATTGGTGCTGCTGTCAGTCTAGGAATCAATGTTGCGTTGATGGATATTTGAAATGCATGGAGTATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGTGGCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATATGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA767238             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTGGGTTTTGCTATATGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAAGTTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTTTCCGAAATTCAGGCACCACCAGAAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTTGGTATAGAAGGTGCAAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAATTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGGATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCCGAAGGTATCAAAGAAGTTCTGAATGGCACCGGCATTACGGGAAAGGAAAACAAGATCGAAGTGAAGGAGCCTACAGTTGTTGAACAAACTACAGCGCATCATTCAAAAAGCTTTGCTGTTAATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAGACAATTTCAAGNTACTGTCTTGGCCTGCTCGAAGATCATTCCATCCAAACCTGCCACTTGGAAGACGAGGAAACAAAAACATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTNCCTTCTAATCGAGNTTGNTGNCCGACTACAGAATGGTGGTAATGCATTTCAAGAGNTGAGNGATAAGGCTAACTTCAAAGAGCCTGGGCAGGAGCCTGGTGCAGTTAGNACTAGGGATGGCGGCTTTTTCCATAAAAATGCNAATTCGTCGGAATCAAAAGTTACATCGCAAATGACCC]




>consensus_7981#1
AGCTCTGGGCGTTCGCGCGGGCCGACCCGCGGAAGGCCGTGTTCGCGGCCAAGGTCGGCC
TGGCGCTGGCGCTCATCTCGCTGCTGGTGTTCCTCCGTGAGCCCCGCGACATCGTCAGCC
ACTCCGTCTGGGCCATCCTCACCGTCGTCGTCGTCTTCGAGTTCAGCATCGGTGCAACAT
TTAGCAAAGGTTTTAATAGGGGATTGGGTACCCTTACCGCTGGAGGGCTTGCGCTAGCAG
TCGCCGAATTGTCCAAACACCTGGGAAAGCTGGAGGAAGTAATTCTTATAATTAGCATAT
TTATTGTTGCTTTTTTCACAACCTTGACGAAACTGCATCCAAAAATGAAGGCCTATGAGT
ATGGGTTCCGCGTATTCTTGTTGACATTCTGCTATGTCATGGTTTCTGGGTACAACACAG
GGAAGTTCACTGATACGGCTGTGAGTAGATTTATATTAATTGCTATTGGTGCTGCTGTCA
GTCTAGGAATCAATGTTGCGTTGATGGATATTTGAAATGCATGGAGTATGAAAGGATTCC
TTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGTGGCTATAGGGCAGC
AGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATATGGGAGCCACCCCA
TGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAAGTTGGTGGGGCATT
GAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTTTCCGAAATTCAGGC
ACCACCAGAAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTTGGTATAGAAGGTGC
AAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAATTGAGCTCTTCAGA
TATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGGATTGATGAGAAGTC
GTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCCGAAGGTATCAAAGA
AGTTCTGAATGGCACCGGCATTACGGGAAAGGAAAACAAGATCGAAGTGAAGGAGCCTAC
AGTTGTTGAACAAACTACAGCGCATCATTCAAAAAGCTTTGCTGTTAATTCATTTCTGAG
CAGACATGATTCATCATCAACTGTAGACAATTTCAAGNTACTGTCTTGGCCTGCTCGAAG
ATCATTCCATCCAAACCTGCCACTTGGAAGACGAGGAAACAAAAACATATGAAAGTGCAA
GTGCTCTGTCCTTGGCCACATTTGCCTNCCTTCTAATCGAGNTTGNTGNCCGACTACAGA
ATGGTGGTAATGCATTTCAAGAGNTGAGNGATAAGGCTAACTTCAAAGAGCCTGGGCAGG
AGCCTGGTGCAGTTAGNACTAGGGATGGCGGCTTTTTCCATAAAAATGCNAATTCGTCGG
AATCAAAAGTTACATCGCAAATGACCC

consensusID : consensus_7981#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1203
fasta sequence 
                              [TATGGGCTGGACAAGATTTGCACAATTTGGTTGCAAAAAACTTCATTGGTGTTGCAAAATCCTTGGAAGTATTGTATGCTTGATACCGTTTTTGGCTGTTCATTCTAGGTTGCGTTGATGGATATTTGAAATGCATGGAGTATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGTGGCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATATGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAAGTTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTTTCCGAAATTCAGGCACCACCAGAAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTTGGTATAGAAGGTGCAAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAATTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGGATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCCGAAGGTATCAAAGAAGTTCTGAATGGCACTGGCATTATGGGAAAGGAAAACAAGATCGAAGTGAAGGAGCCTACAATTGTTGAACAAACTACAGCGCATCACTCAAAAAGCTTTGCTGTTAATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAGATTTCAAGTTACTGTCTTGGCCTGCTCGAAGATCATTCCATCCAAATCTGCCACTTGAAGACGAGGAAACAAAAACATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTCCCTTCTAATCGAGTTTGTTGCCCGACTGCAGAACGTTGTTAATGCATTTCAAGAGTTGAGTGATAAGGCTAACTTCAAAGAGCCTGTGCAGGAGCCTGTTGCAGTTAGTACTAGTGATGGCGGCTTTCTCCATAAAATATGCAAATTCGTCGGAATCAAGAGTTAACATCGCAAATGACCCTACTAGTTTCATCTGAAACCTTGTTATTCTTTTTTTTTTTCAATACAGTTTTGTTTAAGAATTACGAACCACGAAATGTGTATAAATTCTACACTTGTGTATATGCAATGAGAATATTGCGAGC]

[+] EMBL AK059623             [TATGGGCTGGACAAGATTTGCACAATTTGGTTGCAAAAAACTTCATTGGTGTTGCAAAATCCTTGGAAGTATTGTATGCTTGATACCGTTTTTGGCTGTTCATTCTAGGTTGCGTTGATGGATATTTGAAATGCATGGAGTATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGTGGCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATATGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAAGTTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTTTCCGAAATTCAGGCACCACCAGAAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTTGGTATAGAAGGTGCAAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAATTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGGATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCCGAAGGTATCAAAGAAGTTCTGAATGGCACTGGCATTATGGGAAAGGAAAACAAGATCGAAGTGAAGGAGCCTACAATTGTTGAACAAACTACAGCGCATCACTCAAAAAGCTTTGCTGTTAATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAGATTTCAAGTTACTGTCTTGGCCTGCTCGAAGATCATTCCATCCAAATCTGCCACTTGAAGACGAGGAAACAAAAACATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTCCCTTCTAATCGAGTTTGTTGCCCGACTGCAGAACGTTGTTAATGCATTTCAAGAGTTGAGTGATAAGGCTAACTTCAAAGAGCCTGTGCAGGAGCCTGTTGCAGTTAGTACTAGTGATGGCGGCTTTCTCCATAAAATATGCAAATTCGTCGGAATCAAGAGTTAACATCGCAAATGACCCTACTAGTTTCATCTGAAACCTTGTTATTCTTTTTTTTTTTCAATACAGTTTTGTTTAAGAATTACGAACCACGAAATGTGTATAAATTCTACACTTGTGTATATGCAATGAGAATATTGCGAGC]




>consensus_7981#2
TATGGGCTGGACAAGATTTGCACAATTTGGTTGCAAAAAACTTCATTGGTGTTGCAAAAT
CCTTGGAAGTATTGTATGCTTGATACCGTTTTTGGCTGTTCATTCTAGGTTGCGTTGATG
GATATTTGAAATGCATGGAGTATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCAT
CTGATGATCCTCTATATAGTGGCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAA
CTCTGTTGGGTTTTGCTATATGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACC
CCTGGAGGAATTTCACCAAAGTTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGG
CATTGCATGGCTGTATTCTTTCCGAAATTCAGGCACCACCAGAAAGCAGAAAGGTTTTTA
GTGCAGAAATTCAGAGAGTTGGTATAGAAGGTGCAAAAGTGTTGCGCGAGCTTGGAGACA
AAGTCAAGACAATGACCAAATTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTG
CTGAACAGTTGCAAAAAAGGATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGAT
GGGACACTAGCAAGCAAGCCGAAGGTATCAAAGAAGTTCTGAATGGCACTGGCATTATGG
GAAAGGAAAACAAGATCGAAGTGAAGGAGCCTACAATTGTTGAACAAACTACAGCGCATC
ACTCAAAAAGCTTTGCTGTTAATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAG
ATTTCAAGTTACTGTCTTGGCCTGCTCGAAGATCATTCCATCCAAATCTGCCACTTGAAG
ACGAGGAAACAAAAACATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTCCC
TTCTAATCGAGTTTGTTGCCCGACTGCAGAACGTTGTTAATGCATTTCAAGAGTTGAGTG
ATAAGGCTAACTTCAAAGAGCCTGTGCAGGAGCCTGTTGCAGTTAGTACTAGTGATGGCG
GCTTTCTCCATAAAATATGCAAATTCGTCGGAATCAAGAGTTAACATCGCAAATGACCCT
ACTAGTTTCATCTGAAACCTTGTTATTCTTTTTTTTTTTCAATACAGTTTTGTTTAAGAA
TTACGAACCACGAAATGTGTATAAATTCTACACTTGTGTATATGCAATGAGAATATTGCG
AGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7981#0      CCTTCTAGAGCGTTCCGGATCCACCGGCCATGGCGGCCGCGGGGAGCGCGGGGTCCTCGC 60
consensus_7981#1      ------------------------------------------------------------
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      CGCCGCCGCCGCCGGGGCAGCTGGGGACGCTGTGGTCGACGCTGGAGGACCAGCGCGGCG 120
consensus_7981#1      ------------------------------------------------------------
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      GGGCGCGGGAGGTGCCCCTGCTGTCGTCGGCGTGGGGCCTGCCGGGCGGCGGGAGGGGCG 180
consensus_7981#1      ------------------------------------------------------------
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      GGGACGGGGGCGGGGGCGGGGAAGGGGGTGGGTGGAAGGAGGGCTTGGTCCGGCGTGCCG 240
consensus_7981#1      ------------------------------------------------------------
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      GCGCCGCGGCGGCGCGCGTGTGGGGCGCCGTGCGCGGCGCGGCGGAGGAGCTGTGGGCGT 300
consensus_7981#1      ------------------------------------------------AGCTCTGGGCGT 12
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      TCGCGCGGGCCGACCCGCGGAAGGCCGTGTTCGCGGCCAAGGTCGGCCTGGCGCTGGCGC 360
consensus_7981#1      TCGCGCGGGCCGACCCGCGGAAGGCCGTGTTCGCGGCCAAGGTCGGCCTGGCGCTGGCGC 72
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      TCATCTCGCTGCTGGTGTTCCTCCGTGAGCCCCGCGACATCGTCAGCCACTCCGTCTGGG 420
consensus_7981#1      TCATCTCGCTGCTGGTGTTCCTCCGTGAGCCCCGCGACATCGTCAGCCACTCCGTCTGGG 132
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      CCATCCTCACCGTCGTCGTCGTCTTCGAGTTCAGCATCGGTGCAACATTTAGCAAAGGTT 480
consensus_7981#1      CCATCCTCACCGTCGTCGTCGTCTTCGAGTTCAGCATCGGTGCAACATTTAGCAAAGGTT 192
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      TTAATAGGGGATTGGGTACCCTTACCGCTGGAGGGCTTGCGCTAGCAGTCGCGGAATTGT 540
consensus_7981#1      TTAATAGGGGATTGGGTACCCTTACCGCTGGAGGGCTTGCGCTAGCAGTCGCCGAATTGT 252
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      CCAAACACCTGGGAAAGCTGGAGGAAGTAATTCTTATAATTAGCATATTTATTGTTGCTT 600
consensus_7981#1      CCAAACACCTGGGAAAGCTGGAGGAAGTAATTCTTATAATTAGCATATTTATTGTTGCTT 312
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      TTTTCACAACCTTGACGAAACTGCATCCAAAAATGAAGGCCTATGAGTATGGGTTCCGCG 660
consensus_7981#1      TTTTCACAACCTTGACGAAACTGCATCCAAAAATGAAGGCCTATGAGTATGGGTTCCGCG 372
consensus_7981#2      ------------------------------------------------------------
                                                                                  

consensus_7981#0      TATTCTTGTTGACATTCTGCTATGTCATGGTTTCTGGGTACAAC-ACAGGGAAGTTCACT 719
consensus_7981#1      TATTCTTGTTGACATTCTGCTATGTCATGGTTTCTGGGTACAAC-ACAGGGAAGTTCACT 431
consensus_7981#2      -------------TATGGGCTGGACAAGATTTGCACAATTTGGTTGCAAAAAACTTCATT 47
                                     *  ***     *   ** *    *       **   ** **** *

consensus_7981#0      GATACGGCTGTGAGTAGATTTATATTAATTGCTATTGGTGCTGCTGTCAGTCTAGGAATC 779
consensus_7981#1      GATACGGCTGTGAGTAGATTTATATTAATTGCTATTGGTGCTGCTGTCAGTCTAGGAATC 491
consensus_7981#2      GGTGTTGCAAAATCCTTGGAAGTATTGTATGCT--TGATACCGTTTTTGGCTGTTCATTC 105
                      * *   **              ****   ****  ** * * * * *  *      * **

consensus_7981#0      AATGTAGGTATTTACCCAATATGGGCTGGACAAGATTTGCACAATTTGGTTGCAAAAAAC 839
consensus_7981#1      AATGT------------------------------------------------------- 496
consensus_7981#2      TAGGT------------------------------------------------------- 110
                       * **                                                       

consensus_7981#0      TTCATTGGTGTTGCAAAATCCTTGGAAGGTTGCGTTGATGGATATTTGAAATGCATGGAG 899
consensus_7981#1      ------------------------------TGCGTTGATGGATATTTGAAATGCATGGAG 526
consensus_7981#2      ------------------------------TGCGTTGATGGATATTTGAAATGCATGGAG 140
                                                    ******************************

consensus_7981#0      TATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGT 959
consensus_7981#1      TATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGT 586
consensus_7981#2      TATGAAAGGATTCCTTCGAAAATACTTGTATATCAAGCATCTGATGATCCTCTATATAGT 200
                      ************************************************************

consensus_7981#0      GGCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATA 1019
consensus_7981#1      GGCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATA 646
consensus_7981#2      GGCTATAGGGCAGCAGTTGAGGCATCAGCACAAGAGGAAACTCTGTTGGGTTTTGCTATA 260
                      ************************************************************

consensus_7981#0      TGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAA 1079
consensus_7981#1      TGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAA 706
consensus_7981#2      TGGGAGCCACCCCATGGCGCTTACAAAATGATGAAGTACCCCTGGAGGAATTTCACCAAA 320
                      ************************************************************

consensus_7981#0      GTTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTT 1139
consensus_7981#1      GTTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTT 766
consensus_7981#2      GTTGGTGGGGCATTGAGGCATTGCTCCTTTGCAGTCATGGCATTGCATGGCTGTATTCTT 380
                      ************************************************************

consensus_7981#0      TCCGAAATTCAG----------AAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTT 1189
consensus_7981#1      TCCGAAATTCAGGCACCACCAGAAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTT 826
consensus_7981#2      TCCGAAATTCAGGCACCACCAGAAAGCAGAAAGGTTTTTAGTGCAGAAATTCAGAGAGTT 440
                      ************          **************************************

consensus_7981#0      GGTATAGAAGGTGCAAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAA 1249
consensus_7981#1      GGTATAGAAGGTGCAAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAA 886
consensus_7981#2      GGTATAGAAGGTGCAAAAGTGTTGCGCGAGCTTGGAGACAAAGTCAAGACAATGACCAAA 500
                      ************************************************************

consensus_7981#0      TTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGG 1309
consensus_7981#1      TTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGG 946
consensus_7981#2      TTGAGCTCTTCAGATATTCTAGCAGAAGTCCACTTGGCTGCTGAACAGTTGCAAAAAAGG 560
                      ************************************************************

consensus_7981#0      ATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCC 1369
consensus_7981#1      ATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCC 1006
consensus_7981#2      ATTGATGAGAAGTCGTACCTTCTTGTGAATACTGAAAGATGGGACACTAGCAAGCAAGCC 620
                      ************************************************************

consensus_7981#0      GAAGGTATCAAAGAAGTTCTGAATGGCACTGGCATTATGGGAAAGGAAAACAAGATCGAA 1429
consensus_7981#1      GAAGGTATCAAAGAAGTTCTGAATGGCACCGGCATTACGGGAAAGGAAAACAAGATCGAA 1066
consensus_7981#2      GAAGGTATCAAAGAAGTTCTGAATGGCACTGGCATTATGGGAAAGGAAAACAAGATCGAA 680
                      ***************************** ******* **********************

consensus_7981#0      GTGAAGGAGCCTACAATTGTTGAACAAACTACAGCGCATCATTCAAAAAGCTTTGCTGTT 1489
consensus_7981#1      GTGAAGGAGCCTACAGTTGTTGAACAAACTACAGCGCATCATTCAAAAAGCTTTGCTGTT 1126
consensus_7981#2      GTGAAGGAGCCTACAATTGTTGAACAAACTACAGCGCATCACTCAAAAAGCTTTGCTGTT 740
                      *************** ************************* ******************

consensus_7981#0      AATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAGA---TTTCAAGTTACTGTCT 1546
consensus_7981#1      AATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAGACAATTTCAAGNTACTGTCT 1186
consensus_7981#2      AATTCATTTCTGAGCAGACATGATTCATCATCAACTGTAGA---TTTCAAGTTACTGTCT 797
                      *****************************************   ******* ********

consensus_7981#0      TGGCCTGCTCGAAGATCATTCCATCCAAATCTGCCACTTG-AAGACGAGGAAACAAAAAC 1605
consensus_7981#1      TGGCCTGCTCGAAGATCATTCCATCCAAACCTGCCACTTGGAAGACGAGGAAACAAAAAC 1246
consensus_7981#2      TGGCCTGCTCGAAGATCATTCCATCCAAATCTGCCACTTG-AAGACGAGGAAACAAAAAC 856
                      ***************************** ********** *******************

consensus_7981#0      ATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTCCCTTCTAATCGAGTTTGT 1665
consensus_7981#1      ATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTNCCTTCTAATCGAGNTTGN 1306
consensus_7981#2      ATATGAAAGTGCAAGTGCTCTGTCCTTGGCCACATTTGCCTCCCTTCTAATCGAGTTTGT 916
                      ***************************************** ************* *** 

consensus_7981#0      TGCCCGACTACAGAACGTTGTTAATGCATTTCAAGAGTTGAGTGATAAGGCTAACTTCAA 1725
consensus_7981#1      TGNCCGACTACAGAATGGTGGTAATGCATTTCAAGAGNTGAGNGATAAGGCTAACTTCAA 1366
consensus_7981#2      TGCCCGACTGCAGAACGTTGTTAATGCATTTCAAGAGTTGAGTGATAAGGCTAACTTCAA 976
                      ** ****** ***** * ** **************** **** *****************

consensus_7981#0      AGAGCCTGTGCAGGAGCCTGTTGCAGTTAGTACTAGTGATGGCGGCTTTCTCCATAAAAT 1785
consensus_7981#1      AGAGCCTGGGCAGGAGCCTGGTGCAGTTAGNACTAGGGATGGCGGCTTTTTCCATAAAA- 1425
consensus_7981#2      AGAGCCTGTGCAGGAGCCTGTTGCAGTTAGTACTAGTGATGGCGGCTTTCTCCATAAAAT 1036
                      ******** *********** ********* ***** ************ ********* 

consensus_7981#0      ATGCAAATTCGTCGGAATCAAGAGTTAACATCGCAAATGACCCTACTAGTTTCATCTGAA 1845
consensus_7981#1      ATGCNAATTCGTCGGAATCAAAAGTTA-CATCGCAAATGACCC----------------- 1467
consensus_7981#2      ATGCAAATTCGTCGGAATCAAGAGTTAACATCGCAAATGACCCTACTAGTTTCATCTGAA 1096
                      **** **************** ***** ***************                 

consensus_7981#0      ACCTTGTTATTCTTTTTTTTTTTTCAATACAGTTTTGTTTAAGAATTACGAACCACGAAA 1905
consensus_7981#1      ------------------------------------------------------------
consensus_7981#2      ACCTTGTTATTCTTTTTTTTTTTCAATACAGTTTTGTTTAAGAATTACGAACCACGAAAT 1156
                                                                                  

consensus_7981#0      TGTGTATAAATTCTACACTTGTGTATATGCAATGAGAATATTGCAAGCTTTATTTTTGAA 1965
consensus_7981#1      ------------------------------------------------------------
consensus_7981#2      GTGTATAAATTCTACACTTGTGTATATGCAATGAGAATATTGCGAGC------------- 1203
                                                                                  

consensus_7981#0      TGGAGCTCCAGTTTGCTACCAAAAAAAAAAAGG 1998
consensus_7981#1      ---------------------------------
consensus_7981#2      ---------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)