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Oryza sativa
cluster # 7994 cluster # 7994       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7994#0 length = 815 sequences # 5  

consensusID : consensus_7994#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 815
fasta sequence
                              [AAGGCAAACCGCTCAACTCTCTCCGCTCCAAACGACTAGCTCGATCACTTGCTAGCTGCCTAGCTCCCACCATGATGGCTTCGCGAGTCTCCTCCCTCCTCCGCGCCGCCGCCGCGG-GGT-G-TCCGTCCCCGGCCGCTCCCGCTCACTCTCCGCCGCAGCGGCGACGGCGGCGAAGAAGCCGGCGGGGGACTACGTGCCGGTGTACGTGGCGATGGGGATGATCGCGGTGTCGGTGTCGCTGGGCCTGGCGACGGCGAGGCAGCAGCTGGCGCACG-GGCCAACGTGCGGCTCGACAAGAAGAAGCGGGAGACGGTGCCCGAGGTGGCGGCGCCGGAC-ATGGCGCTCGACGAGGCGGAGCGGTTCGTCGGCGGGTCGCTGTTCCGCAAGGTGGCGCACGTGCAGGACGACGCCTCGCTCCGCGCCGGCGTCGCCGCCGACCCCGTCGCCGAGTACCCGGCCAGGAAGGCCGTCACCCTCAAGGACGCCGGCGTCGAGCCCCCCGGCATCGAGCAGGGCAGGGAGGGGATCCTCGAGGTGTTGGGGAAGAAGACCAAGCCCGCCGCCGCTGCTTGAAGCTGAAGCGTGTGATATAATTGCAGTTAATTAGTAGTGGGTTAATCTGGGTTCTCCTTGCTTTAATTAGTTTTATTTGCTTAATTACTGGTTGCTTTGTTTTAGTCTTTCAAACCGGCTGTACTTTTATGAAGTCGATGTGTGTGTTGGGGAACTGCTTGTACATATGTCAATCCAGCTTTGATGAAAAAAAAAATTATCAAATTTTAGCATTTTAAAATTTTGGTATAGTTACTTAAAAA]

[+] EMBL AK063652             [AAGGCAAACCGCTCAACTCTCTCCGCTCCAAACGACTAGCTCGATCACTTGCTAGCTGCCTAGCTCCCACCATGATGGCTTCGCGAGTCTCCTCCCTCCTCCGCGCCGCCGCCGCGGCGGT G TCCGTCCCCGGCCGCTCCCGCTCACTCTCCGCCGCAGCGGCGACGGCGGCGAAGAAGCCGGCGGGGGACTACGTGCCGGTGTACGTGGCGATGGGGATGATCGCGGTGTCGGTGTCGCTGGGCCTGGCGACGGCGAGGCAGCAGCTGGCGCACGCGCCCAACGTGCGGCTCGACAAGAAGAAGCGGGAGACGGTGCCCGAGGTGGCGGCGCCGGAC ATGGCGCTCGACGAGGCGGAGCGGTTCGTCGGCGGGTCGCTGTTCCGCAAGGTGGCGCACGTGCAGGACGACGCCTCGCTCCGCGCCGGCGTCGCCGCCGACCCCGTCGCCGAGTACCCGGCCAGGAAGGCCGTCACCCTCAAGGACGCCGGCGTCGAGCCCCCCGGCATCGAGCAGGGCAGGGAGGGGATCCTCGAGGTGTTGGGGAAGAAGACCAAGCCCGCCGCCGCTGCTTGAAGCTGAAGCGTGTGATATAATTGCAGTTAATTAGTAGTGGGTTAATCTGGGTTCTCCTTGCTTTAATTAGTTTTATTTGCTTAATTACTGGTTGCTTTGTTTTAGTCTTTCAAACCGGCTGTACTTTTATGAAGTCGATGTGTGTGTTGGGGAACTGCTTGTACATATGTCAATCC                                                                  ]
[+] EMBL C28976               [                  CTCTCCGCTCCAAACGACTAGCTCGATCACTTGCTAGCTGCCTAGCTCCCACCATGATGGCTTCGCGAGTCTCCTCCCTCCTCCGCGNCGCCGNCGCGG GGT GNTCCGTCCCCGGCCGNTCCCGCTCACTCTCCGCCGNAGCGGCGACGGCGGCGAAGAAGCCGGCGGGGGACTACGTGCCGGTGTACGTGGCGATGGGGATGATCGCGGTGTCGGTGTCGCTGGGCCTGGCGACGGCGAGGAAGCAGNTGGCGNACG GGCCAACGTNCGGTTCGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU082645             [                   TCTCCGCTCCAAACGACTAGCTCGATCACTTGCTAGCTGCCTAGCTCCCACCATNATGGCTTCGCGAGTCTCCTCCCTCCTCCGNGCCGCCGCCGCGG GNTNG TCCGTCCCCGGCCGCTCCCGCTCACTCTCCGCCGCAGCGGCGACGGCGGCGAAGAAGCCGGCGGGGGACTACGTGCCGGTGTACGTGGCGATGGGGATGATCGCGGTGTCGGTGTCGCTGGGCCTNGCGACGGCNAGGCAGCAGCTNGCGCACG GGCCAANGTGCGGCTCGACAAGAAGAAGCGGGAGACGGTNCCCGAGGTGGCGGCG CGGACAATGGCGTTCGACGAGGCGGANGGGTTCGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU172370             [                                                                                                                                                                                                                                                                                                                                                                                               TTCCGCAAGGTGGCGCACGTGCAGGACGACGCCTCGCTCCGCGCCGGCGTCGCCGCCGACCCCGTCGCCGAGTACCCGGCCAGGAAGGCCGTCACCCTCAAGGACGCCGGCGTCGAGCCCCCCGGCATCGAGCAGGGCAGGGAGGGGATCCTCGAGGTGTTGGGGAAGAAGACCAAGCCCGCCGCCGCTGCTTGAAGCTGAAGCGTGTGATATAATTGCAGTTAATTAGTAGTGGGTTAATCTGGGTTCTCCNTGCTTTAATTAGTTTTATTTGCTTAATTACTGGTTGCTTTGTTTTAGTCTTTCAAACCGGCTGTACTTTTATGAAGTCGATGTGTGTGTTGGGGAACTGCTTGTACATATGTCAATCCAGCTTTGATGAAAAAAAAAATTATCAAATTTTAGCATTTTAAAATTTTGGTATAGTTACTTAAAAA]
[+] EMBL AU082644             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGCCCCCCGGCATCGAGCAGGGCAGGGAGGGGANCCTCGAGGTGTTGGGGAAGAAGACCAAGCCCGCCGCCGCTGCTTGAAGCTGAAGCGTGTGATATAATTGCAGTTAATTAGTAGTGGGTTAATCTGGGTTCTCCTTGCTTTAATTAGTTTTATTTGCTTAATTACTGGTTGCTTTGTTTTAGTCTTTCAAACCGGCTGTACTTTTATGAAGTCGATGTGTGTGTTGGGGAACTGCTTGTACATATGTCAATCCAGCTTTGATGAAAAAAAAAATTATCAAATTTTAGCATTTTAAAAa                     ]


>consensus_7994#0 AAGGCAAACCGCTCAACTCTCTCCGCTCCAAACGACTAGCTCGATCACTTGCTAGCTGCC TAGCTCCCACCATGATGGCTTCGCGAGTCTCCTCCCTCCTCCGCGCCGCCGCCGCGGGGT GTCCGTCCCCGGCCGCTCCCGCTCACTCTCCGCCGCAGCGGCGACGGCGGCGAAGAAGCC GGCGGGGGACTACGTGCCGGTGTACGTGGCGATGGGGATGATCGCGGTGTCGGTGTCGCT GGGCCTGGCGACGGCGAGGCAGCAGCTGGCGCACGGGCCAACGTGCGGCTCGACAAGAAG AAGCGGGAGACGGTGCCCGAGGTGGCGGCGCCGGACATGGCGCTCGACGAGGCGGAGCGG TTCGTCGGCGGGTCGCTGTTCCGCAAGGTGGCGCACGTGCAGGACGACGCCTCGCTCCGC GCCGGCGTCGCCGCCGACCCCGTCGCCGAGTACCCGGCCAGGAAGGCCGTCACCCTCAAG GACGCCGGCGTCGAGCCCCCCGGCATCGAGCAGGGCAGGGAGGGGATCCTCGAGGTGTTG GGGAAGAAGACCAAGCCCGCCGCCGCTGCTTGAAGCTGAAGCGTGTGATATAATTGCAGT TAATTAGTAGTGGGTTAATCTGGGTTCTCCTTGCTTTAATTAGTTTTATTTGCTTAATTA CTGGTTGCTTTGTTTTAGTCTTTCAAACCGGCTGTACTTTTATGAAGTCGATGTGTGTGT TGGGGAACTGCTTGTACATATGTCAATCCAGCTTTGATGAAAAAAAAAATTATCAAATTT TAGCATTTTAAAATTTTGGTATAGTTACTTAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)