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Oryza sativa
cluster # 8000 cluster # 8000       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8000#0 length = 4059 sequences # 4  
consensus_8000#1 length = 384 sequences # 1  

consensusID : consensus_8000#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 4059
fasta sequence
                              [TACAGTTTTGAAAGGTAGCTTCTACCTCCCTCATCTAATTTATGTTTTATTAATCTGAAAAGATTAACAGGCTGCAAACTTCAAAGATCATGTTCACATTGCTGTATCCATCGTAATCAGTAGTGTCTCTGTAGAAGCGTAGAGTTACAGATGATCGCAGACGTTGAACTATATTATAGATGGAAGGTTAACGTGTAATCCTTTTACTTAATCCAACATGATGCTGCCATGAAGATGGAAAATTTTATTTGTAGATGACAAGCAGGAAGATATCATGATAGGTAACTGATCGTAATATTTTTTCTTTTGGTGACAGGTGGAGTTGTAGAGTGTATTTTCCGTGTATATTAAAGAAACATATCACTGTAACAAAGTGCTAGCTTGCTTGTCTCCGATGCTTCTAGGCCTCTAGCAACAGATGGCATTTTACAAAGATATGCCTAGATCTCATTACTAAGCACATACTCCCTCCGTCCCAAAATATAGTTGCCTTTGTAGTTCAAACAAAGGTACAAAGGTAGCTATATTTCGGGACAGAAGGAGTAGTACAGTAAGGACAAGGAAACCGGTTTCCTTTCCTACCAATACCCAATTTTGGCATTCTGAACTATTTTCAGCTAATCAAATGGTTCTTTCTTCTGTTCAAACAAGAAGAAACAGGTACTCCTGCTACTGACTGGGATAAAATTTGAAGCCTTAATGGTAATCGCTATGAAGTTCCAAGTTATTAATTCTAATCTCTGGGAAAGTGTTCAAGTAAAGAGCCTACTTTTTACTGCTGCAGATTATCATGATGCCACAGCATTGATATCATGATTGTTACCTACATCTTTCTACTGTTATGTATAGAGGTTGTAAATTCTCTGTATGTAATTTGCTAAATCAACACTGTACTTATGAGTTAGTCAGAAGGAAAAAAAATGGATTTAATACACCAACAAAAAGTAGCCTGCAAATGAATACTAATTTGAGGTGCCATGTACTCATGTTAGTGGTCTAATGATTGAGTTGCAACTAAATCTCTATTCTGTCTTCAGCTTCATGATCACTTCTTGCTAGCTAGCTGTGTACTGCACTTCTGTGCTGGGTAATCTGGAGACAGCATTTTGGTTTGTCTAGAGGGTGAGGTGCAGATTTACAGCAAAGACTCACTTCCTAATAAGGTAATATGTACATGTTTACTTCTGTTGGTGGAACCAGTTTGTTATGCACAACTGATTTATGCTTTGCCAATGAAGTAGCAACCTGTATTCTTTCCCTAACAATGCAGTGCAAGAAAACACCTGTGTTAATGTAGGTTGTTGAATTGACGTTATAACTAAAGCTGGATATGGAGTTATGATTGTTGCTGCAGCCCGGAGTTTGTTCTTCTATGTTTGATGTTCTAGTATACTAGTTGGTCAAGTAATTTATTTTTCTACTTTTGCTCCAAGATAGGTAATCAAATTTCTTTGATTAAGTGCTAGGTCCCTGGTTCCAGACAAGAAAATGCATATAATGTGATAATTCACCTGTTCTGGGATTACTACCAGATTTAAACTTTTTGACAAGTGAACTAGAATGTCGCCTTGATTAGATGTGATCTGATTCTGCAGTGGTTTAAAATAGATAGAGTATTCCATTTTGTTCTGATGTTTTCTGGGCTCAGAAAATATGATCTTGTTTTCACAATTTGCATGCTCTTAAAAAAACTTGCGCTGAAGAAGGATTTTGTGAATGCCTTTTATGTCACATTCATGTTTCTTAATATTCCTTGTTTTACAAATAAAGCAATACAGAACTAGGAGCATTATATTTCTAAAAGAAACAAAAGTATTATGAAGCTTGTGGCTAGAAAAAATGGAATGCTATTTCAAACTAATGCAAAACAAAGATTGGTGTTAAAGTTCCTTTTCTAATTAAGAGAAGAGGGTCGGTGTCTACTCGTTCAGAAATTATAATTAAGTTTGTACTCTCTTTTCTAGAGCTTGATTGTTTTTTTTCTCTTGTGAACTATAAATGTTATGGACTAAAGCATCTCCTGCATGTGTCCCATGTGAAGCACTGCAGTTGAGAATGTGATGAAAAATCTAATAAATTAGGAGAAAACTTTTATTTCTTTGCTGACACGCATATTATTCAATGGTATTATCCAAGGGAGAGAAGTGCACAGCACAACCCAAATGACTCATCTATTGATAATGAAGGTTTGTCCCCTTTATGCTCCCTGGTTTACTGCAATAATGTAGATTTATCCCTTATATGCTCCCCAATTTAATCCAAATGACTCATGTATTCTGGTAGTGAAGGTTGTGGTCCCTTTTTGTGCTCCCTGTATTACTGCCATAATGCAGGTTTGTCTTTCTTATGCTCCCCGATTCACTGCAAAATGCACAGCATAAGTTCCAATGTATATCATCAAAGAACCTTTTGTGATGGAAATGATATTTACTTGTCAAGCACTTCATAATATGAAATTGCATGGCAGTCATGTACTCATGTTTGTGACCACATTATTATTAAACTCCGTGCGCAAGCCGTCCATGGAGTAAAACAAAAAGTAGGAACGGGCTTCATTTGTGCTCTTTGAAGTTGAACAGATCAATCACACATCACTGATACGTGAGAGAGATTGACCCGTAACTACTCTGGGTGACTGATTGATAGAATCGCGTCAATTTGGGTTACTGATAAACTTGCAAAATCATTAACGTCAGCGTCCAAACAACGACCAGATCAGAGTAACCATTGCCATCAAAGTTGTTTGTAAGAAGCTTAGGCACGCAATCGCTTGTTGTCGACATCCTTACTCCACTGCCAAGATTTGTTAGCTAAGTATTCATATATGCACACAGAAACTAACAGAGATATAAAATTATGAAATTCACATTGGCTAGCCATTTGGAAGTTTCAATGTGGAGTATCTAGTTTTCTTCTGGATGAATGCATCACAGGGGTAGCTTTCATGATTATTGATTTTACAGGATCATTAC-TGAAGTTCCAGAGAACATATATTTTTTATGGCATCTCTTTCTATTCGTATTCCTGGTGTATTATTTGTGTACTTTCTCTTTGCTTTTTAAGACATTCAAGGAAAACGTGTGAGTATATATATTTTTTCACATCTAGCAGTAGCATAGTAGAGAGTACTCAATATGGACATTGTTGGCAGCACAAGTAACCTGTCTAGCAATAATTCAATTCAGTACTTCTGGGTTCAGCAATCAATCATTTTTCTTACCAAATGGGACATAAAATTATGGGTGGCAATAGATGCCTGTGGAATAATGCGAGATAGACTATCTTAGTTAAACATTGGGAGTTGGAGAAAAGAAAGGGAGAAGGGTAAATAAACTACCTAGACATACCAATACATCTTCCTCATTTAGAGTTTCTCTCAACCTGACATGCATATAAAATTTTGTTTCTTTATCGTTTTTATTTTTAGGCATCATCTACTAATTTATTTATATCATTTTTGAACCTCTGTTACTTTCTTGACGTTCGCAGTAATTGTTTGTTCATGCTAATGCTAGGAAAAGTATGTGATGGAAAAGATTTTGCCTTCTTTAACATGTATGAATGCATTTGGATGACTAAATCACAGTTTTATTCTTCAAACATGGAGCAGCCTAATCTGAAGGGTCCTACTTCTACAGGTTGTTTCACTTTTAGGTGCTCTTAGGTGAGAAAAAGCATGCCATATGCCAGTACGGATCTTTTTGTGTCTGTTAGACAACAAAATACCATTGCCAATTCGGTTTTGTTAGAGAGCGATGCCAATACAAACAAGAAAAAGCATTCGTCTACCAACCATGACAATGATCAATTGGGTGTGACTGAGTGAGCAACAAGCTATATTCTCCAGGCCTCCAGACTTCAGCAAAACACAGACCAGGGCTTCCTGATTTCCATTAGTTAGGTTATCAAATGTGTTAAGAGCAGAGAACTACAAATGAATTC-GGCCTTGTCAGTTCCCTTCTTTTGGGCCGATTCTTGTGCAATTTCAGTATTCCTGCACATTGTCCAAACAGACTATTGATCTTTTTTCATTAATTTTACAGACAGTTTATGTGAAAA]

[+] EMBL AK120662             [TACAGTTTTGAAAGGTAGCTTCTACCTCCCTCATCTAATTTATGTTTTATTAATCTGAAAAGATTAACAGGCTGCAAACTTCAAAGATCATGTTCACATTGCTGTATCCATCGTAATCAGTAGTGTCTCTGTAGAAGCGTAGAGTTACAGATGATCGCAGACGTTGAACTATATTATAGATGGAAGGTTAACGTGTAATCCTTTTACTTAATCCAACATGATGCTGCCATGAAGATGGAAAATTTTATTTGTAGATGACAAGCAGGAAGATATCATGATAGGTAACTGATCGTAATATTTTTTCTTTTGGTGACAGGTGGAGTTGTAGAGTGTATTTTCCGTGTATATTAAAGAAACATATCACTGTAACAAAGTGCTAGCTTGCTTGTCTCCGATGCTTCTAGGCCTCTAGCAACAGATGGCATTTTACAAAGATATGCCTAGATCTCATTACTAAGCACATACTCCCTCCGTCCCAAAATATAGTTGCCTTTGTAGTTCAAACAAAGGTACAAAGGTAGCTATATTTCGGGACAGAAGGAGTAGTACAGTAAGGACAAGGAAACCGGTTTCCTTTCCTACCAATACCCAATTTTGGCATTCTGAACTATTTTCAGCTAATCAAATGGTTCTTTCTTCTGTTCAAACAAGAAGAAACAGGTACTCCTGCTACTGACTGGGATAAAATTTGAAGCCTTAATGGTAATCGCTATGAAGTTCCAAGTTATTAATTCTAATCTCTGGGAAAGTGTTCAAGTAAAGAGCCTACTTTTTACTGCTGCAGATTATCATGATGCCACAGCATTGATATCATGATTGTTACCTACATCTTTCTACTGTTATGTATAGAGGTTGTAAATTCTCTGTATGTAATTTGCTAAATCAACACTGTACTTATGAGTTAGTCAGAAGGAAAAAAAATGGATTTAATACACCAACAAAAAGTAGCCTGCAAATGAATACTAATTTGAGGTGCCATGTACTCATGTTAGTGGTCTAATGATTGAGTTGCAACTAAATCTCTATTCTGTCTTCAGCTTCATGATCACTTCTTGCTAGCTAGCTGTGTACTGCACTTCTGTGCTGGGTAATCTGGAGACAGCATTTTGGTTTGTCTAGAGGGTGAGGTGCAGATTTACAGCAAAGACTCACTTCCTAATAAGGTAATATGTACATGTTTACTTCTGTTGGTGGAACCAGTTTGTTATGCACAACTGATTTATGCTTTGCCAATGAAGTAGCAACCTGTATTCTTTCCCTAACAATGCAGTGCAAGAAAACACCTGTGTTAATGTAGGTTGTTGAATTGACGTTATAACTAAAGCTGGATATGGAGTTATGATTGTTGCTGCAGCCCGGAGTTTGTTCTTCTATGTTTGATGTTCTAGTATACTAGTTGGTCAAGTAATTTATTTTTCTACTTTTGCTCCAAGATAGGTAATCAAATTTCTTTGATTAAGTGCTAGGTCCCTGGTTCCAGACAAGAAAATGCATATAATGTGATAATTCACCTGTTCTGGGATTACTACCAGATTTAAACTTTTTGACAAGTGAACTAGAATGTCGCCTTGATTAGATGTGATCTGATTCTGCAGTGGTTTAAAATAGATAGAGTATTCCATTTTGTTCTGATGTTTTCTGGGCTCAGAAAATATGATCTTGTTTTCACAATTTGCATGCTCTTAAAAAAACTTGCGCTGAAGAAGGATTTTGTGAATGCCTTTTATGTCACATTCATGTTTCTTAATATTCCTTGTTTTACAAATAAAGCAATACAGAACTAGGAGCATTATATTTCTAAAAGAAACAAAAGTATTATGAAGCTTGTGGCTAGAAAAAATGGAATGCTATTTCAAACTAATGCAAAACAAAGATTGGTGTTAAAGTTCCTTTTCTAATTAAGAGAAGAGGGTCGGTGTCTACTCGTTCAGAAATTATAATTAAGTTTGTACTCTCTTTTCTAGAGCTTGATTGTTTTTTTTCTCTTGTGAACTATAAATGTTATGGACTAAAGCATCTCCTGCATGTGTCCCATGTGAAGCACTGCAGTTGAGAATGTGATGAAAAATCTAATAAATTAGGAGAAAACTTTTATTTCTTTGCTGACACGCATATTATTCAATGGTATTATCCAAGGGAGAGAAGTGCACAGCACAACCCAAATGACTCATCTATTGATAATGAAGGTTTGTCCCCTTTATGCTCCCTGGTTTACTGCAATAATGTAGATTTATCCCTTATATGCTCCCCAATTTAATCCAAATGACTCATGTATTCTGGTAGTGAAGGTTGTGGTCCCTTTTTGTGCTCCCTGTATTACTGCCATAATGCAGGTTTGTCTTTCTTATGCTCCCCGATTCACTGCAAAATGCACAGCATAAGTTCCAATGTATATCATCAAAGAACCTTTTGTGATGGAAATGATATTTACTTGTCAAGCACTTCATAATATGAAATTGCATGGCAGTCATGTACTCATGTTTGTGACCACATTATTATTAAACTCCGTGCGCAAGCCGTCCATGGAGTAAAACAAAAAGTAGGAACGGGCTTCATTTGTGCTCTTTGAAGTTGAACAGATCAATCACACATCACTGATACGTGAGAGAGATTGACCCGTAACTACTCTGGGTGACTGATTGATAGAATCGCGTCAATTTGGGTTACTGATAAACTTGCAAAATCATTAACGTCAGCGTCCAAACAACGACCAGATCAGAGTAACCATTGCCATCAAAGTTGTTTGTAAGAAGCTTAGGCACGCAATCGCTTGTTGTCGACATCCTTACTCCACTGCCAAGATTTGTTAGCTAAGTATTCATATATGCACACAGAAACTAACAGAGATATAAAATTATGAAATTCACATTGGCTAGCCATTTGGAAGTTTCAATGTGGAGTATCTAGTTTTCTTCTGGATGAATGCATCACAGGGGTAGCTTTCATGATTATTGATTTTACAGGATCATTAC TGAAGTTCCAGAGAACATATATTTTTTATGGCATCTCTTTCTATTCGTATTCCTGGTGTATTATTTGTGTACTTTCTCTTTGCTTTTTAAGACATTCAAGGAAAACGTGTGAGTATATATATTTTTTCACATCTAGCAGTAGCATAGTAGAGAGTACTCAATATGGACATTGTTGGCAGCACAAGTAACCTGTCTAGCAATAATTCAATTCAGTACTTCTGGGTTCAGCAATCAATCATTTTTCTTACCAAATGGGACATAAAATTATGGGTGGCAATAGATGCCTGTGGAATAATGCGAGATAGACTATCTTAGTTAAACATTGGGAGTTGGAGAAAAGAAAGGGAGAAGGGTAAATAAACTACCTAGACATACCAATACATCTTCCTCATTTAGAGTTTCTCTCAACCTGACATGCATATAAAATTTTGTTTCTTTATCGTTTTTATTTTTAGGCATCATCTACTAATTTATTTATATCATTTTTGAACCTCTGTTACTTTCTTGACGTTCGCAGTAATTGTTTGTTCATGCTAATGCTAGGAAAAGTATGTGATGGAAAAGATTTTGCCTTCTTTAACATGTATGAATGCATTTGGATGACTAAATCACAGTTTTATTCTTCAAACATGGAGCAGCCTAATCTGAAGGGTCCTACTTCTACAGGTTGTTTCACTTTTAGGTGCTCTTAGGTGAGAAAAAGCATGCCATATGCCAGTACGGATCTTTTTGTGTCTGTTAGACAACAAAATACCATTGCCAATTCGGTTTTGTTAGAGAGCGATGCCAATACAAACAAGAAAAAGCATTCGTCTACCAACCATGACAATGATCAATTGGGTGTGACTGAGTGAGCAACAAGCTATATTCTCCAGGCCTCCAGACTTCAGCAAAACACAGACCAGGGCTTCCTGATTTCCATTAGTTAGGTTATCAAATGTGTTAAGAGCAGAGAACTACAAATGAATTC GGCCTTGTCAGTTCCCTTCTTTTGGGCCGATTCTTGTGCAATTTCAGTATTCCTGCACATTGTCCAAACAGACTATTGATCTTTTTTCATTAATTTTACAGACAGT           ]
[+] EMBL C72513               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACTGATAAACTTGCAAAATCATTAACGTCAGCGTCCAAACAACGACCAGATCAGAGTAACCATTGCCATCAAAGTTGTTTGTAAGAAGCTTAGGCACGCAATCGCTTGTTGTCGACATCCTTACTCCACTGCCAAGATTTGTTAGCTAAGTATTCATATATGCACACAGAAACTAACAGAGATATAAAATTATGAAATTCACATTGGCTAGCCATTTGGAAGTTTCAATGTGGAGTATCTAGTTTTCTTCTGGATGAATGCATCACAGGGGTAGCTTTCATGATTATTGATTTTACAGGATCATTACTTGAAGTTCCAGAGACCATATATTTTTTATGGCATCTCTTTCTATTCGTATTCCTGGGGTATTATTTGNGTACTTNCTCTTTGCTTTTTAAGNCATTCc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB000526             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACCAGATCAGAGTAACCATTGCCATCAAAGTTGTTTGTAAGAAGCTTAGGCACGCAATCGCTTGTTGTCGACATCCTTACTCCACTGCCAAGATTTGTTAGCTAAGTATTCATATATGCACACAGAAACTAACAGAGATATAAAATTATGAAATTCACATTGGCTAGCCATTTGGAAGTTTCAATGTGGAGTATCTAGTTTTCTTCTGGATGAATGCATCACAGGGGTAGCTTTCATGATTATTGATTTTACAGGATCATTAC TGAAGTTCCAGAGAACATATATTTTTTATGGCATCTCTTTCTATTCGTATTCCTGGTGTATTATTTGTGTACTTTCTCTTTGCTTTTTAAGACATTCAAGGAAAACGTGTGAGTATATATATTTTTTCACATCTAGCAGTAGCATAGTAGAGAGTACTCAATATGGACATTGTTGGCAGCACAAGTAACCTGTCTAGCAATAATTCAATTCAGTACTTCTGGGTTCAGCAATCAATCATTTTTCTTACCAAATGGGACATAAAATTATGGGTGGCAATAGATGCCTGTGGAATAATGCGAGATAGACTATCTTAGTTAAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU083446             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTTGTTAGAGAGCGATNCCAATACAANCAAGAAAANGCATTCGTCTACCAACCATGACAATGATCAATTGGGTGTGACTGAGTGAGCAACAAGCTATATTCTCCAGGCCTCCAGACTTCAGCAAAACACAGACCAGGGCTTCCTGATTTCCATTAGTTAGGTTATCAAATGTGTTAAGAGCAGAGAACTACAAATGAATTCTGGCCTTGTCAGTNCCCTTCTTTTGGGCCGATTCTTGTGCAATTTCAGTATTCCTGCACATTGTCCAAACAGACTATTGAT TTTTTTCATTAATTTTACAGACAGTTTATGTGAAAA]


>consensus_8000#0 TACAGTTTTGAAAGGTAGCTTCTACCTCCCTCATCTAATTTATGTTTTATTAATCTGAAA AGATTAACAGGCTGCAAACTTCAAAGATCATGTTCACATTGCTGTATCCATCGTAATCAG TAGTGTCTCTGTAGAAGCGTAGAGTTACAGATGATCGCAGACGTTGAACTATATTATAGA TGGAAGGTTAACGTGTAATCCTTTTACTTAATCCAACATGATGCTGCCATGAAGATGGAA AATTTTATTTGTAGATGACAAGCAGGAAGATATCATGATAGGTAACTGATCGTAATATTT TTTCTTTTGGTGACAGGTGGAGTTGTAGAGTGTATTTTCCGTGTATATTAAAGAAACATA TCACTGTAACAAAGTGCTAGCTTGCTTGTCTCCGATGCTTCTAGGCCTCTAGCAACAGAT GGCATTTTACAAAGATATGCCTAGATCTCATTACTAAGCACATACTCCCTCCGTCCCAAA ATATAGTTGCCTTTGTAGTTCAAACAAAGGTACAAAGGTAGCTATATTTCGGGACAGAAG GAGTAGTACAGTAAGGACAAGGAAACCGGTTTCCTTTCCTACCAATACCCAATTTTGGCA TTCTGAACTATTTTCAGCTAATCAAATGGTTCTTTCTTCTGTTCAAACAAGAAGAAACAG GTACTCCTGCTACTGACTGGGATAAAATTTGAAGCCTTAATGGTAATCGCTATGAAGTTC CAAGTTATTAATTCTAATCTCTGGGAAAGTGTTCAAGTAAAGAGCCTACTTTTTACTGCT GCAGATTATCATGATGCCACAGCATTGATATCATGATTGTTACCTACATCTTTCTACTGT TATGTATAGAGGTTGTAAATTCTCTGTATGTAATTTGCTAAATCAACACTGTACTTATGA GTTAGTCAGAAGGAAAAAAAATGGATTTAATACACCAACAAAAAGTAGCCTGCAAATGAA TACTAATTTGAGGTGCCATGTACTCATGTTAGTGGTCTAATGATTGAGTTGCAACTAAAT CTCTATTCTGTCTTCAGCTTCATGATCACTTCTTGCTAGCTAGCTGTGTACTGCACTTCT GTGCTGGGTAATCTGGAGACAGCATTTTGGTTTGTCTAGAGGGTGAGGTGCAGATTTACA GCAAAGACTCACTTCCTAATAAGGTAATATGTACATGTTTACTTCTGTTGGTGGAACCAG TTTGTTATGCACAACTGATTTATGCTTTGCCAATGAAGTAGCAACCTGTATTCTTTCCCT AACAATGCAGTGCAAGAAAACACCTGTGTTAATGTAGGTTGTTGAATTGACGTTATAACT AAAGCTGGATATGGAGTTATGATTGTTGCTGCAGCCCGGAGTTTGTTCTTCTATGTTTGA TGTTCTAGTATACTAGTTGGTCAAGTAATTTATTTTTCTACTTTTGCTCCAAGATAGGTA ATCAAATTTCTTTGATTAAGTGCTAGGTCCCTGGTTCCAGACAAGAAAATGCATATAATG TGATAATTCACCTGTTCTGGGATTACTACCAGATTTAAACTTTTTGACAAGTGAACTAGA ATGTCGCCTTGATTAGATGTGATCTGATTCTGCAGTGGTTTAAAATAGATAGAGTATTCC ATTTTGTTCTGATGTTTTCTGGGCTCAGAAAATATGATCTTGTTTTCACAATTTGCATGC TCTTAAAAAAACTTGCGCTGAAGAAGGATTTTGTGAATGCCTTTTATGTCACATTCATGT TTCTTAATATTCCTTGTTTTACAAATAAAGCAATACAGAACTAGGAGCATTATATTTCTA AAAGAAACAAAAGTATTATGAAGCTTGTGGCTAGAAAAAATGGAATGCTATTTCAAACTA ATGCAAAACAAAGATTGGTGTTAAAGTTCCTTTTCTAATTAAGAGAAGAGGGTCGGTGTC TACTCGTTCAGAAATTATAATTAAGTTTGTACTCTCTTTTCTAGAGCTTGATTGTTTTTT TTCTCTTGTGAACTATAAATGTTATGGACTAAAGCATCTCCTGCATGTGTCCCATGTGAA GCACTGCAGTTGAGAATGTGATGAAAAATCTAATAAATTAGGAGAAAACTTTTATTTCTT TGCTGACACGCATATTATTCAATGGTATTATCCAAGGGAGAGAAGTGCACAGCACAACCC AAATGACTCATCTATTGATAATGAAGGTTTGTCCCCTTTATGCTCCCTGGTTTACTGCAA TAATGTAGATTTATCCCTTATATGCTCCCCAATTTAATCCAAATGACTCATGTATTCTGG TAGTGAAGGTTGTGGTCCCTTTTTGTGCTCCCTGTATTACTGCCATAATGCAGGTTTGTC TTTCTTATGCTCCCCGATTCACTGCAAAATGCACAGCATAAGTTCCAATGTATATCATCA AAGAACCTTTTGTGATGGAAATGATATTTACTTGTCAAGCACTTCATAATATGAAATTGC ATGGCAGTCATGTACTCATGTTTGTGACCACATTATTATTAAACTCCGTGCGCAAGCCGT CCATGGAGTAAAACAAAAAGTAGGAACGGGCTTCATTTGTGCTCTTTGAAGTTGAACAGA TCAATCACACATCACTGATACGTGAGAGAGATTGACCCGTAACTACTCTGGGTGACTGAT TGATAGAATCGCGTCAATTTGGGTTACTGATAAACTTGCAAAATCATTAACGTCAGCGTC CAAACAACGACCAGATCAGAGTAACCATTGCCATCAAAGTTGTTTGTAAGAAGCTTAGGC ACGCAATCGCTTGTTGTCGACATCCTTACTCCACTGCCAAGATTTGTTAGCTAAGTATTC ATATATGCACACAGAAACTAACAGAGATATAAAATTATGAAATTCACATTGGCTAGCCAT TTGGAAGTTTCAATGTGGAGTATCTAGTTTTCTTCTGGATGAATGCATCACAGGGGTAGC TTTCATGATTATTGATTTTACAGGATCATTACTGAAGTTCCAGAGAACATATATTTTTTA TGGCATCTCTTTCTATTCGTATTCCTGGTGTATTATTTGTGTACTTTCTCTTTGCTTTTT AAGACATTCAAGGAAAACGTGTGAGTATATATATTTTTTCACATCTAGCAGTAGCATAGT AGAGAGTACTCAATATGGACATTGTTGGCAGCACAAGTAACCTGTCTAGCAATAATTCAA TTCAGTACTTCTGGGTTCAGCAATCAATCATTTTTCTTACCAAATGGGACATAAAATTAT GGGTGGCAATAGATGCCTGTGGAATAATGCGAGATAGACTATCTTAGTTAAACATTGGGA GTTGGAGAAAAGAAAGGGAGAAGGGTAAATAAACTACCTAGACATACCAATACATCTTCC TCATTTAGAGTTTCTCTCAACCTGACATGCATATAAAATTTTGTTTCTTTATCGTTTTTA TTTTTAGGCATCATCTACTAATTTATTTATATCATTTTTGAACCTCTGTTACTTTCTTGA CGTTCGCAGTAATTGTTTGTTCATGCTAATGCTAGGAAAAGTATGTGATGGAAAAGATTT TGCCTTCTTTAACATGTATGAATGCATTTGGATGACTAAATCACAGTTTTATTCTTCAAA CATGGAGCAGCCTAATCTGAAGGGTCCTACTTCTACAGGTTGTTTCACTTTTAGGTGCTC TTAGGTGAGAAAAAGCATGCCATATGCCAGTACGGATCTTTTTGTGTCTGTTAGACAACA AAATACCATTGCCAATTCGGTTTTGTTAGAGAGCGATGCCAATACAAACAAGAAAAAGCA TTCGTCTACCAACCATGACAATGATCAATTGGGTGTGACTGAGTGAGCAACAAGCTATAT TCTCCAGGCCTCCAGACTTCAGCAAAACACAGACCAGGGCTTCCTGATTTCCATTAGTTA GGTTATCAAATGTGTTAAGAGCAGAGAACTACAAATGAATTCGGCCTTGTCAGTTCCCTT CTTTTGGGCCGATTCTTGTGCAATTTCAGTATTCCTGCACATTGTCCAAACAGACTATTG ATCTTTTTTCATTAATTTTACAGACAGTTTATGTGAAAA



consensusID : consensus_8000#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 384
fasta sequence
                              [GAGTAGTACAGTAAGGACAAGGAAACCGGTTTCCTTTCCTACCAATACCCAATTTTGGCATTCTGAACTCTTTTCAGCTAATNAAATGGTTCTTTCTTCTGTTCAAACAAGAAGAAACAGGTACTCCTGCTACTGACTGGGATAAAATTTGAAGCCTTAATGCTTCATGATCACTTCTTGCTAGCTAGCTGTGTACTGCACTTCTGTGCTGGGTAATCTGGAGACAGCATTTTGGTTTGTCTAGAGGGTGAGGTGCAGATTTACAGCAAAGACTCACTTCCTAATAAGGTAATATGTACATGTTTACTTCTGTTGGTGGAACCAGTTTGTTATGCACAACTGATTTATGCTTTGCCAATGAAGTAGCAACCTGTATTCTTTCCC]

[+] EMBL CA764878             [GAGTAGTACAGTAAGGACAAGGAAACCGGTTTCCTTTCCTACCAATACCCAATTTTGGCATTCTGAACTCTTTTCAGCTAATNAAATGGTTCTTTCTTCTGTTCAAACAAGAAGAAACAGGTACTCCTGCTACTGACTGGGATAAAATTTGAAGCCTTAATGCTTCATGATCACTTCTTGCTAGCTAGCTGTGTACTGCACTTCTGTGCTGGGTAATCTGGAGACAGCATTTTGGTTTGTCTAGAGGGTGAGGTGCAGATTTACAGCAAAGACTCACTTCCTAATAAGGTAATATGTACATGTTTACTTCTGTTGGTGGAACCAGTTTGTTATGCACAACTGATTTATGCTTTGCCAATGAAGTAGCAACCTGTATTCTTTCCC]


>consensus_8000#1 GAGTAGTACAGTAAGGACAAGGAAACCGGTTTCCTTTCCTACCAATACCCAATTTTGGCA TTCTGAACTCTTTTCAGCTAATNAAATGGTTCTTTCTTCTGTTCAAACAAGAAGAAACAG GTACTCCTGCTACTGACTGGGATAAAATTTGAAGCCTTAATGCTTCATGATCACTTCTTG CTAGCTAGCTGTGTACTGCACTTCTGTGCTGGGTAATCTGGAGACAGCATTTTGGTTTGT CTAGAGGGTGAGGTGCAGATTTACAGCAAAGACTCACTTCCTAATAAGGTAATATGTACA TGTTTACTTCTGTTGGTGGAACCAGTTTGTTATGCACAACTGATTTATGCTTTGCCAATG AAGTAGCAACCTGTATTCTTTCCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8000#0      TACAGTTTTGAAAGGTAGCTTCTACCTCCCTCATCTAATTTATGTTTTATTAATCTGAAA 60
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      AGATTAACAGGCTGCAAACTTCAAAGATCATGTTCACATTGCTGTATCCATCGTAATCAG 120
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TAGTGTCTCTGTAGAAGCGTAGAGTTACAGATGATCGCAGACGTTGAACTATATTATAGA 180
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TGGAAGGTTAACGTGTAATCCTTTTACTTAATCCAACATGATGCTGCCATGAAGATGGAA 240
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      AATTTTATTTGTAGATGACAAGCAGGAAGATATCATGATAGGTAACTGATCGTAATATTT 300
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTTCTTTTGGTGACAGGTGGAGTTGTAGAGTGTATTTTCCGTGTATATTAAAGAAACATA 360
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TCACTGTAACAAAGTGCTAGCTTGCTTGTCTCCGATGCTTCTAGGCCTCTAGCAACAGAT 420
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      GGCATTTTACAAAGATATGCCTAGATCTCATTACTAAGCACATACTCCCTCCGTCCCAAA 480
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      ATATAGTTGCCTTTGTAGTTCAAACAAAGGTACAAAGGTAGCTATATTTCGGGACAGAAG 540
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      GAGTAGTACAGTAAGGACAAGGAAACCGGTTTCCTTTCCTACCAATACCCAATTTTGGCA 600
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTCTGAACTATTTTCAGCTAATCAAATGGTTCTTTCTTCTGTTCAAACAAGAAGAAACAG 660
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      GTACTCCTGCTACTGACTGGGATAAAATTTGAAGCCTTAATGGTAATCGCTATGAAGTTC 720
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      CAAGTTATTAATTCTAATCTCTGGGAAAGTGTTCAAGTAAAGAGCCTACTTTTTACTGCT 780
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      GCAGATTATCATGATGCCACAGCATTGATATCATGATTGTTACCTACATCTTTCTACTGT 840
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TATGTATAGAGGTTGTAAATTCTCTGTATGTAATTTGCTAAATCAACACTGTACTTATGA 900
consensus_8000#1      ---------GAGTAGTACAGTAAGGACAAGGAAACCGGT-------TTCCTTTCCTACCA 44
                                 ** *** * *      * * **   * *         *  * * **  *

consensus_8000#0      GTTAGTCAGAAGGAAAAAAAATGGATTTAATACACCAACAAAAAGTAGCCTGCAAATGAA 960
consensus_8000#1      AT--ACCCAATTTTGGCATTCTGAACTCTTTTCAGCTA-ATNAAATGGTTCTTTCTTCTG 101
                       *    *  *       *   ** * *   * ** * * *  ** * *        *   

consensus_8000#0      TACTAATTTGAGGTGCCATGTACTCATGTTAGTGGTCTAATGATTGAGTTGCAACTAAAT 1020
consensus_8000#1      TTCAAACAAGAAGAAACAGGTACTCCTGCTACTGACTGG--GATAAAATT-----TGAAG 154
                      * * **   ** *   ** ****** ** ** **       ***  * **     * ** 

consensus_8000#0      CTCTATTCTGTCTTCAGCTTCATGATCACTTCTTGCTAGCTAGCTGTGTACTGCACTTCT 1080
consensus_8000#1      CCTTAAT---------GCTTCATGATCACTTCTTGCTAGCTAGCTGTGTACTGCACTTCT 205
                      *  ** *         ********************************************

consensus_8000#0      GTGCTGGGTAATCTGGAGACAGCATTTTGGTTTGTCTAGAGGGTGAGGTGCAGATTTACA 1140
consensus_8000#1      GTGCTGGGTAATCTGGAGACAGCATTTTGGTTTGTCTAGAGGGTGAGGTGCAGATTTACA 265
                      ************************************************************

consensus_8000#0      GCAAAGACTCACTTCCTAATAAGGTAATATGTACATGTTTACTTCTGTTGGTGGAACCAG 1200
consensus_8000#1      GCAAAGACTCACTTCCTAATAAGGTAATATGTACATGTTTACTTCTGTTGGTGGAACCAG 325
                      ************************************************************

consensus_8000#0      TTTGTTATGCACAACTGATTTATGCTTTGCCAATGAAGTAGCAACCTGTATTCTTTCCCT 1260
consensus_8000#1      TTTGTTATGCACAACTGATTTATGCTTTGCCAATGAAGTAGCAACCTGTATTCTTTCCC- 384
                      *********************************************************** 

consensus_8000#0      AACAATGCAGTGCAAGAAAACACCTGTGTTAATGTAGGTTGTTGAATTGACGTTATAACT 1320
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      AAAGCTGGATATGGAGTTATGATTGTTGCTGCAGCCCGGAGTTTGTTCTTCTATGTTTGA 1380
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TGTTCTAGTATACTAGTTGGTCAAGTAATTTATTTTTCTACTTTTGCTCCAAGATAGGTA 1440
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      ATCAAATTTCTTTGATTAAGTGCTAGGTCCCTGGTTCCAGACAAGAAAATGCATATAATG 1500
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TGATAATTCACCTGTTCTGGGATTACTACCAGATTTAAACTTTTTGACAAGTGAACTAGA 1560
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      ATGTCGCCTTGATTAGATGTGATCTGATTCTGCAGTGGTTTAAAATAGATAGAGTATTCC 1620
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      ATTTTGTTCTGATGTTTTCTGGGCTCAGAAAATATGATCTTGTTTTCACAATTTGCATGC 1680
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TCTTAAAAAAACTTGCGCTGAAGAAGGATTTTGTGAATGCCTTTTATGTCACATTCATGT 1740
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTCTTAATATTCCTTGTTTTACAAATAAAGCAATACAGAACTAGGAGCATTATATTTCTA 1800
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      AAAGAAACAAAAGTATTATGAAGCTTGTGGCTAGAAAAAATGGAATGCTATTTCAAACTA 1860
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      ATGCAAAACAAAGATTGGTGTTAAAGTTCCTTTTCTAATTAAGAGAAGAGGGTCGGTGTC 1920
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TACTCGTTCAGAAATTATAATTAAGTTTGTACTCTCTTTTCTAGAGCTTGATTGTTTTTT 1980
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTCTCTTGTGAACTATAAATGTTATGGACTAAAGCATCTCCTGCATGTGTCCCATGTGAA 2040
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      GCACTGCAGTTGAGAATGTGATGAAAAATCTAATAAATTAGGAGAAAACTTTTATTTCTT 2100
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TGCTGACACGCATATTATTCAATGGTATTATCCAAGGGAGAGAAGTGCACAGCACAACCC 2160
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      AAATGACTCATCTATTGATAATGAAGGTTTGTCCCCTTTATGCTCCCTGGTTTACTGCAA 2220
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TAATGTAGATTTATCCCTTATATGCTCCCCAATTTAATCCAAATGACTCATGTATTCTGG 2280
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TAGTGAAGGTTGTGGTCCCTTTTTGTGCTCCCTGTATTACTGCCATAATGCAGGTTTGTC 2340
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTTCTTATGCTCCCCGATTCACTGCAAAATGCACAGCATAAGTTCCAATGTATATCATCA 2400
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      AAGAACCTTTTGTGATGGAAATGATATTTACTTGTCAAGCACTTCATAATATGAAATTGC 2460
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      ATGGCAGTCATGTACTCATGTTTGTGACCACATTATTATTAAACTCCGTGCGCAAGCCGT 2520
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      CCATGGAGTAAAACAAAAAGTAGGAACGGGCTTCATTTGTGCTCTTTGAAGTTGAACAGA 2580
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TCAATCACACATCACTGATACGTGAGAGAGATTGACCCGTAACTACTCTGGGTGACTGAT 2640
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TGATAGAATCGCGTCAATTTGGGTTACTGATAAACTTGCAAAATCATTAACGTCAGCGTC 2700
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      CAAACAACGACCAGATCAGAGTAACCATTGCCATCAAAGTTGTTTGTAAGAAGCTTAGGC 2760
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      ACGCAATCGCTTGTTGTCGACATCCTTACTCCACTGCCAAGATTTGTTAGCTAAGTATTC 2820
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      ATATATGCACACAGAAACTAACAGAGATATAAAATTATGAAATTCACATTGGCTAGCCAT 2880
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTGGAAGTTTCAATGTGGAGTATCTAGTTTTCTTCTGGATGAATGCATCACAGGGGTAGC 2940
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTTCATGATTATTGATTTTACAGGATCATTACTGAAGTTCCAGAGAACATATATTTTTTA 3000
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TGGCATCTCTTTCTATTCGTATTCCTGGTGTATTATTTGTGTACTTTCTCTTTGCTTTTT 3060
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      AAGACATTCAAGGAAAACGTGTGAGTATATATATTTTTTCACATCTAGCAGTAGCATAGT 3120
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      AGAGAGTACTCAATATGGACATTGTTGGCAGCACAAGTAACCTGTCTAGCAATAATTCAA 3180
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTCAGTACTTCTGGGTTCAGCAATCAATCATTTTTCTTACCAAATGGGACATAAAATTAT 3240
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      GGGTGGCAATAGATGCCTGTGGAATAATGCGAGATAGACTATCTTAGTTAAACATTGGGA 3300
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      GTTGGAGAAAAGAAAGGGAGAAGGGTAAATAAACTACCTAGACATACCAATACATCTTCC 3360
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TCATTTAGAGTTTCTCTCAACCTGACATGCATATAAAATTTTGTTTCTTTATCGTTTTTA 3420
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTTTTAGGCATCATCTACTAATTTATTTATATCATTTTTGAACCTCTGTTACTTTCTTGA 3480
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      CGTTCGCAGTAATTGTTTGTTCATGCTAATGCTAGGAAAAGTATGTGATGGAAAAGATTT 3540
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TGCCTTCTTTAACATGTATGAATGCATTTGGATGACTAAATCACAGTTTTATTCTTCAAA 3600
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      CATGGAGCAGCCTAATCTGAAGGGTCCTACTTCTACAGGTTGTTTCACTTTTAGGTGCTC 3660
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTAGGTGAGAAAAAGCATGCCATATGCCAGTACGGATCTTTTTGTGTCTGTTAGACAACA 3720
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      AAATACCATTGCCAATTCGGTTTTGTTAGAGAGCGATGCCAATACAAACAAGAAAAAGCA 3780
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TTCGTCTACCAACCATGACAATGATCAATTGGGTGTGACTGAGTGAGCAACAAGCTATAT 3840
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      TCTCCAGGCCTCCAGACTTCAGCAAAACACAGACCAGGGCTTCCTGATTTCCATTAGTTA 3900
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      GGTTATCAAATGTGTTAAGAGCAGAGAACTACAAATGAATTCGGCCTTGTCAGTTCCCTT 3960
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      CTTTTGGGCCGATTCTTGTGCAATTTCAGTATTCCTGCACATTGTCCAAACAGACTATTG 4020
consensus_8000#1      ------------------------------------------------------------
                                                                                  

consensus_8000#0      ATCTTTTTTCATTAATTTTACAGACAGTTTATGTGAAAA 4059
consensus_8000#1      ---------------------------------------
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)