cluster # 8009

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Oryza sativa
cluster # 8009 cluster # 8009 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8009#0 length = 1934 sequences # 5
consensusID : consensus_8009#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1934
fasta sequence
                              [ATCCATTTCTTCCTCTACCATACTATACCTAGCTTGCCACCAACAACAGTACACCATGCCCAAGAAGAAGCTGTCACATAGGCTGTTCTCTGCCTTGGTATCCCTACTCCTTCATGGGAAGCCTATCTCTAGATCATCATCCAACACCAACACCACATTGCCACACCCTTCCTTGCTGCACAAGTCCTCCTCAAGCTTCCCTCCCATGGAGAAGCTCGCCGCGAAAACCCTAGTACTCGACGTCGAAGGCGGTTTGCTTAGATCATCCTCCTTGTTCCCCTACTTCATGCTTGTGGCACTAGAGGCAGGAGGGTTCTTGAGGGGCCTTGTGCTCCTCCTCCTCTACCCATTGCTATGTGTCATGGGAAGTGACATGGCCTTGAAGGTCATGGCAATGGTGTCCTTCTGCGGTTTACGGGCAAGCCGGTTTCGGGCCGGGCGAGCCGTGCTTCCCAAGTGGTTCCTTGAGGATGTTGGGGAGGAAGGGTTTGATGTGATGAGGAGTGCCATGAGGAGGGTGTGTGTGACAAAGATGCCTAGGATCATGGTTGAAGGGTTCTTGAAGGAGTACTTGGAGGTTGAGGTTGTTTCAGGTAGGGAGATGAAGGTGATTTGGGGGTTCTTCACTGGCATCATGGAGGAGGAAGAAGGTGGTGATCAAGAGGAGGTGTTGCTTGAGGAGAAGAAAATGTTGGTTGATGTTGTGGGCTTCTCTACCTCCTTGGAGTTCCTCCAACATCATCTCTCACATTGTTGCAAGGAGGTGTACCTGGTGACACGTGAGGAGAAGGCGAGGTGGTCGGCGCTGCCGCGCGACAAGTACCCGAAGCCGATGGTGTTCCACGACGGCCGCCTCGCGTTCCGGCCAGCCGCCGGCGACACGCTCGCCATGTTCACCTGGCTCCCCTTCGGCGCCGCCCTCGCCGTCGCCCGCCTCGCCGTCGCGCTCGCCGTGCCGTACAGGTACTCGACGCCGATCCTGGCCGCCACGGGCTTGTCGTGGCGCCTCAAGGGCGAGGCCCCCACGCCGCTCGCCGGCGCCGGCGACGGCGCGCGCCGGCGCGGGCAGCTGTTCGTGTGCAACCACCGGACGCTGATCGACCCGGTGTACGTGTCGGTGGCGCTGGACCGCCCCGTGCGCGCCGTGTCGTACAGCCTGAGCCGGCTGTCGGAGCTGATCTCGCCGATCGGGCGGACGGTGCGGCTGACGCGGGACCGCGACAGCGACGGGCGCGCCATGGCGCGGCTCCTCGACGGCGGCGACCTCGTCGTCGTCTGCCCCGAGGGGACGACGTGCCGGGAGCCGCGCCTGCTCCGGTTCAGCCCGCTGTTCGCGGAGCTGAGCGACGACGTGGTCCCCGTCGGGATCGCCGTCGACACGGCGATGTTCTAC-GCGACGACG-GCCGGCGGGCTCAAGTGCCTGGACCCGCTCTACTACATCGCCAACCCGAGGACGTGCTACGCCGTGCAGTTCCTGGAGAGGGTGGACACGTCGCCGGCGAGGGAGCGGAGGGCGCCGTCCACCGACGTGGCCAACCTCGTGCAGAGGAGGATGGGCGACGCGCTCGGCTACCGCTGCACCATGCTCACCAGGAAGGACAAGTACCTCATGCTCGCCGGCAACGATGGCGTCGTCAACACCACCCAAGACAACCACTCTGCTCCGGGGAAGAAGAAGATGCAATAATCATGAATTAGATTAGCCAAAAAAGTT-CTCAAAAAAGTTCTAGATAGATTTCGGTTGTTCTTTTATCTTTTTAATTATTTTTTTATGTTGCTGGGTAGTTTAATTTGGTGTGTGTTTAT-ACTGTATTTCATTCTTGCTTCAGTTTGGCTGGTGTGTTCATCAGGTTGATTTCTTC--TGTGTGT-TTT-AATC-AAATTAATGATTGTATAGAAACAACAAGAAGCTGGCACCATCAAGGAGCTTGTAGAGA]

[+] EMBL AK120619             [ATCCATTTCTTCCTCTACCATACTATACCTAGCTTGCCACCAACAACAGTACACCATGCCCAAGAAGAAGCTGTCACATAGGCTGTTCTCTGCCTTGGTATCCCTACTCCTTCATGGGAAGCCTATCTCTAGATCATCATCCAACACCAACACCACATTGCCACACCCTTCCTTGCTGCACAAGTCCTCCTCAAGCTTCCCTCCCATGGAGAAGCTCGCCGCGAAAACCCTAGTACTCGACGTCGAAGGCGGTTTGCTTAGATCATCCTCCTTGTTCCCCTACTTCATGCTTGTGGCACTAGAGGCAGGAGGGTTCTTGAGGGGCCTTGTGCTCCTCCTCCTCTACCCATTGCTATGTGTCATGGGAAGTGACATGGCCTTGAAGGTCATGGCAATGGTGTCCTTCTGCGGTTTACGGGCAAGCCGGTTTCGGGCCGGGCGAGCCGTGCTTCCCAAGTGGTTCCTTGAGGATGTTGGGGAGGAAGGGTTTGATGTGATGAGGAGTGCCATGAGGAGGGTGTGTGTGACAAAGATGCCTAGGATCATGGTTGAAGGGTTCTTGAAGGAGTACTTGGAGGTTGAGGTTGTTTCAGGTAGGGAGATGAAGGTGATTTGGGGGTTCTTCACTGGCATCATGGAGGAGGAAGAAGGTGGTGATCAAGAGGAGGTGTTGCTTGAGGAGAAGAAAATGTTGGTTGATGTTGTGGGCTTCTCTACCTCCTTGGAGTTCCTCCAACATCATCTCTCACATTGTTGCAAGGAGGTGTACCTGGTGACACGTGAGGAGAAGGCGAGGTGGTCGGCGCTGCCGCGCGACAAGTACCCGAAGCCGATGGTGTTCCACGACGGCCGCCTCGCGTTCCGGCCAGCCGCCGGCGACACGCTCGCCATGTTCACCTGGCTCCCCTTCGGCGCCGCCCTCGCCGTCGCCCGCCTCGCCGTCGCGCTCGCCGTGCCGTACAGGTACTCGACGCCGATCCTGGCCGCCACGGGCTTGTCGTGGCGCCTCAAGGGCGAGGCCCCCACGCCGCTCGCCGGCGCCGGCGACGGCGCGCGCCGGCGCGGGCAGCTGTTCGTGTGCAACCACCGGACGCTGATCGACCCGGTGTACGTGTCGGTGGCGCTGGACCGCCCCGTGCGCGCCGTGTCGTACAGCCTGAGCCGGCTGTCGGAGCTGATCTCGCCGATCGGGCGGACGGTGCGGCTGACGCGGGACCGCGACAGCGACGGGCGCGCCATGGCGCGGCTCCTCGACGGCGGCGACCTCGTCGTCGTCTGCCCCGAGGGGACGACGTGCCGGGAGCCGTGCCTGCTCCGGTTCAGCCCGCTGTTCGCGGAGCTGAGCGACGACGTGGTCCCCGTCGGGATCGCCGTCGACACGGCGATGTTCTAC GCGACGACG GCCGGCGGGCTCAAGTGCCTGGACCCGCTCTACTACATCGCCAACCCGAGGACGTGCTACGCCGTGCAGTTCCTGGAGAGGGTGGACACGTCGCCGGCGAGGGAGCGGAGGGCGCCGTCCACCGACGTGGCCAACCTCGTGCAGAGGAGGATGGGCGACGCGCTCGGCTACCGCTGCACCATGCTCACCAGGAAGGACAAGTACCTCATGCTCGCCGGCAACGATGGCGTCGTCAACACCACCCAAGACAACCACTCTGCTCCGGGGAAGAAGAAGATGCAATAATTATGAATTAGATTAGCCAAAAAAGTT CTCAAAAAAGTTCTAGATAGATTTCGGTTGTTCTTTTATCTTTTTAATTATTTTTTTATGTTGCTGGGTAGTTTAATTTGGTGTGTGTTTAT ACTGTATTTCATTCTTGCTTCAGTTTGGCTGGTGTGTTCATCAGGTTGATTTCTTC  TGTGTGT TTT AATC AAATTAATGATTGTATAGAAACAACAAGAAGCTGGCACCATCAAGGAGCTTGTAGAGA]
[+] EMBL CB640653             [                                                                                                                                        TCATCCCACACCAACACCACATTGCCACACCCTTCCTTGCTGCACAAGTCCTCCTCAAGCTTCCCTCCCATGGAGAAGCTCGCCGCGAAAACCCTAGTACTCGACGTCGAAGGCGGTTTGCTTAGATCATCCTCCTTGTTCCCCTACTTCATGCTTGTGGCACTAGAGGCAGGATGTTTTTTGAGGGGCCTTGTGCTCCTCCTCCTCTACCCATTGCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB628036             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCCGCGTCTGCTCCGGTTCAGCCCGCTGTTCGCGGAGCTGAGCGACGACGTGGTCCCCGTCGGGATCGCCGTCGACACGGCGATGTTCTAC GCGACGACA GCCGGCGGGCTCAAGTGCCTGGACCCGCTCTACTACATCGCCAACCCGAGGACGTGCTACGCCGTGCAGTTCCTGGAGAGGGTGGACACGTCGCCGGCGAGGGAGCGGAGGGCGCCGTCCACCGACGTGGCCAACCTCGTGCAGAGGAGGATGGGCGACGCGCTCGGCTACCGCTGCACCATGCTCACCAGGAAGGACAAGTACCTCATGCTCGCCGGCAACGATGGCGTCGTCAACACCACCCAAGACAACCACTCTTCTCCGGGGAAGAAGAAGATGCAATAATCATGAATTAGATTAGCCAAAAAAGTT CTCAAAAAAGTTCTAGATAGATTTCGGTTGTTCTTTTATCTTTTTAATTATTTTTTTATGTTGCTGGGTAGTTTAATTTGGTGTGTGTTTAT ACTGTATTTCATTCTTGCTTCAGTTTGGCTGGTGTGTTCATCAGGTTGATTTCTTCTGTGTGTGT TTT AATC AAATTAATGATTGTATAGAAACAACAAGAAGC                          ]
[+] EMBL BQ907306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         tgcCCTGCTCCGGTTCA CCCGCTGTTNGCGGAGCTGAGCGACGACGTGGTCCCCGTGGGGATCGCCGTCGACACGGCGATGTTCTACTGCGACGACGTGCCGGCGGGCTCAAGTGCCTGGACCCGCTCTACTACATCGCCAACCCGAGGACGTGCTACGCCGTGCAGTTCCTGGAGAGGGTGGACACGTCGCCGGCGAGGGAGCGGAGGGC CCGTCCACCGACGTGGCCAACCTCGTGCAGAGGAGGATGGGCGACGCGCTCGGCTACCGCTGCACCATGCTCACCAGGAAGGACAAGTACCTCATGCTCGCCGGCAACGATGGCGTCGTCAACACCACCCAAGACAACCACTCTGCTCCGGGGAAGAAGAAGATGCAATAATCATGAACTAGATTAGCCAAAAAAGTTATTAAAAAAAGTTCTAGATAGATTTCGGTTGTTCTTTTTTCTTTTTAATTATTTTTTTATGTTGCT GGTAGTTTAATTTGGTGTGTGTTTATAACTGTATTTCCTTCTTGCTTCAGTTTGGCTGGTGTGTTCATCAGGTTGATTTCTTC  TGTGTGTGTTTAAATCAAAATTAATGATTGTATAGAAAAAAaa                                ]
[+] EMBL CF196603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCCCGTCGGGATCGCCGTCGACACGGCGATGTTCTAC GCGACGACG GCCGGCGGGCTCAAGTGCCTGGACCCGCTCTACTACATCGCCAACCCGAGGACGTGCTACGCCGTGCAGTTCCTGGAGAGGGTGGACACGTCGCCGGCGAGGGAGCGGAGGGCGCCGTCCACCGACGTGGCCAACCTCGTGCAGAGGAGGATGGGCGACGCGCTCGGCTACCGCTGCACCATGCTCACCAGGAAGGACAAGTACCTCATGCTCGCCGGCAACGATGGCGTCGTCAACACCACCCAAGACAACCACTCTGCTCCGGGGAAGAAGAAGATGCAATAATCATGAATTAGATTAGCCNAAAAAGTT CTCAAAAAAGTTCTAGATAGATTTCNNNNNNTCTTTTATCTTTTTAATTATTTTTTTATGTTGCTGGG                                                                                                                                                              ]




>consensus_8009#0
ATCCATTTCTTCCTCTACCATACTATACCTAGCTTGCCACCAACAACAGTACACCATGCC
CAAGAAGAAGCTGTCACATAGGCTGTTCTCTGCCTTGGTATCCCTACTCCTTCATGGGAA
GCCTATCTCTAGATCATCATCCAACACCAACACCACATTGCCACACCCTTCCTTGCTGCA
CAAGTCCTCCTCAAGCTTCCCTCCCATGGAGAAGCTCGCCGCGAAAACCCTAGTACTCGA
CGTCGAAGGCGGTTTGCTTAGATCATCCTCCTTGTTCCCCTACTTCATGCTTGTGGCACT
AGAGGCAGGAGGGTTCTTGAGGGGCCTTGTGCTCCTCCTCCTCTACCCATTGCTATGTGT
CATGGGAAGTGACATGGCCTTGAAGGTCATGGCAATGGTGTCCTTCTGCGGTTTACGGGC
AAGCCGGTTTCGGGCCGGGCGAGCCGTGCTTCCCAAGTGGTTCCTTGAGGATGTTGGGGA
GGAAGGGTTTGATGTGATGAGGAGTGCCATGAGGAGGGTGTGTGTGACAAAGATGCCTAG
GATCATGGTTGAAGGGTTCTTGAAGGAGTACTTGGAGGTTGAGGTTGTTTCAGGTAGGGA
GATGAAGGTGATTTGGGGGTTCTTCACTGGCATCATGGAGGAGGAAGAAGGTGGTGATCA
AGAGGAGGTGTTGCTTGAGGAGAAGAAAATGTTGGTTGATGTTGTGGGCTTCTCTACCTC
CTTGGAGTTCCTCCAACATCATCTCTCACATTGTTGCAAGGAGGTGTACCTGGTGACACG
TGAGGAGAAGGCGAGGTGGTCGGCGCTGCCGCGCGACAAGTACCCGAAGCCGATGGTGTT
CCACGACGGCCGCCTCGCGTTCCGGCCAGCCGCCGGCGACACGCTCGCCATGTTCACCTG
GCTCCCCTTCGGCGCCGCCCTCGCCGTCGCCCGCCTCGCCGTCGCGCTCGCCGTGCCGTA
CAGGTACTCGACGCCGATCCTGGCCGCCACGGGCTTGTCGTGGCGCCTCAAGGGCGAGGC
CCCCACGCCGCTCGCCGGCGCCGGCGACGGCGCGCGCCGGCGCGGGCAGCTGTTCGTGTG
CAACCACCGGACGCTGATCGACCCGGTGTACGTGTCGGTGGCGCTGGACCGCCCCGTGCG
CGCCGTGTCGTACAGCCTGAGCCGGCTGTCGGAGCTGATCTCGCCGATCGGGCGGACGGT
GCGGCTGACGCGGGACCGCGACAGCGACGGGCGCGCCATGGCGCGGCTCCTCGACGGCGG
CGACCTCGTCGTCGTCTGCCCCGAGGGGACGACGTGCCGGGAGCCGCGCCTGCTCCGGTT
CAGCCCGCTGTTCGCGGAGCTGAGCGACGACGTGGTCCCCGTCGGGATCGCCGTCGACAC
GGCGATGTTCTACGCGACGACGGCCGGCGGGCTCAAGTGCCTGGACCCGCTCTACTACAT
CGCCAACCCGAGGACGTGCTACGCCGTGCAGTTCCTGGAGAGGGTGGACACGTCGCCGGC
GAGGGAGCGGAGGGCGCCGTCCACCGACGTGGCCAACCTCGTGCAGAGGAGGATGGGCGA
CGCGCTCGGCTACCGCTGCACCATGCTCACCAGGAAGGACAAGTACCTCATGCTCGCCGG
CAACGATGGCGTCGTCAACACCACCCAAGACAACCACTCTGCTCCGGGGAAGAAGAAGAT
GCAATAATCATGAATTAGATTAGCCAAAAAAGTTCTCAAAAAAGTTCTAGATAGATTTCG
GTTGTTCTTTTATCTTTTTAATTATTTTTTTATGTTGCTGGGTAGTTTAATTTGGTGTGT
GTTTATACTGTATTTCATTCTTGCTTCAGTTTGGCTGGTGTGTTCATCAGGTTGATTTCT
TCTGTGTGTTTTAATCAAATTAATGATTGTATAGAAACAACAAGAAGCTGGCACCATCAA
GGAGCTTGTAGAGA
clustalw multiple alignements is not computed in this case