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Oryza sativa
cluster # 8021 cluster # 8021       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8021#0 length = 1554 sequences # 3  
consensus_8021#1 length = 1454 sequences # 1  
consensus_8021#2 length = 620 sequences # 1  

consensusID : consensus_8021#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1554
fasta sequence
                              [ATCTTCCATTTCTTCCCCTCGCCAAGGCGAGGCCGCGAGAGGGGTTTCGAATTGGCGCCAACCATTCCCCCCGATTCCCTCCTCCAGCTCTAGGGTTTCCGCCTCTCTCTGCGCTACGCCATGGCGGGAGCCACCGCCGCCACTCCGATGGACATCGACGCCGCCGCGCCGCCGCCGGGGGCGGCCGCCAAGGGCAAGGCGCCTCTCTCCTCCACTCCCGGCGGTAGGGCCGCGCCCTGGGTCGAGAAGTACCGCCCCCAATCCCTCGGCGATGTCGCCGCCCACCGCGACATCGTCGACACCATTGATAGGCTTACAAATGAGAACAGGCTTCCACATTTGTTGCTTTATGGGCCTCCGGGCACTGGGAAAACATCGACAATACTGGCCGTTGCAAGGAAGTTGTATGGGTCACAGTATGGCAACATGATTCTTGAACTCAATGCATCAGATGAGCGTGGTATTGATGTTGTAAGGCAGCAAATCCAAGACTTCGCAAGTGCCCGCAGTCTCTCTTTCGGAGCAAAGCAATCTGTTAAGATGGTTCTATTGGATGAAGCAGATGCCATGACCAAGGATGCACAGTTTGCATTGCGAAGAGTCATTGAGAAGCATACAAGGAGCACAAGGTTTGCGCTGATATGCAACCATGTGAACAAAATCATTCCAGCACTGCAATCAAGGTGCACCAGGTTTAGATTTGCACCCCTTGATGGCACTCATGTTAGGGAACGTCTTAAACATATAATACAATCCGAGGGGCTTGATGTAGATGACGGTGGTTTGACAGCCCTTGTGCGGTTAAGTAATGGTGATATGAGGAAGGCTTTGAACATATTGCAGTCAACACACATGGCATCTAAGCAAATAACAGAGGAAGCTGTGTACCTTTGCACAGGAAACCCCATGCCGAAAGACATTGAACAGATAGCATACTGGTTGCTGAATGAATCATTTTCAACCAGCTTCAAATGTATATCTGATATGAAGATGAGAAAAGGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGC-TTGCAAT-GACAAGTTACAGCT-GGGGGCGCTGATATCAACTTTCACGGGTGCTCGCACGGCTATGGTTGCTGCTGCCCACTAATTTCAGCAAGGTGATGATCA-TTTTGTTGCCCTTCACTGCCACTTCAATCTGGAAATGACGCGGCAATGCTCGTTATTATTATAAGCATGTGGTTAGCGTAAAGCTTAAAAGCATGGCGAGGAGAAATTTTATCTGTA-GGGTTTGTCTGC-TCGACGTGCTAGCTTCTGGGACTCGGGAGTGCCTTGTAATTGAACTGTAACCGAATTCTATCGGGTGTAACC-GTGTAGGTGATGCAT-GATGCGT-GTAACGTTTTATGCAGTAGAAAATGTATTCACAGNTNCAGCACTTTGCGACGGNCAGAACTTTTTTGGGTCAAGNTACGAAGCAAGAAAGCAGGCCAGCCAAAAN]

[+] EMBL AK069984             [ATCTTCCATTTCTTCCCCTCGCCAAGGCGAGGCCGCGAGAGGGGTTTCGAATTGGCGCCAACCATTCCCCCCGATTCCCTCCTCCAGCTCTAGGGTTTCCGCCTCTCTCTGCGCTACGCCATGGCGGGAGCCACCGCCGCCACTCCGATGGACATCGACGCCGCCGCGCCGCCGCCGGGGGCGGCCGCCAAGGGCAAGGCGCCTCTCTCCTCCACTCCCGGCGGTAGGGCCGCGCCCTGGGTCGAGAAGTACCGCCCCCAATCCCTCGGCGATGTCGCCGCCCACCGCGACATCGTCGACACCATTGATAGGCTTACAAATGAGAACAGGCTTCCACATTTGTTGCTTTATGGGCCTCCGGGCACTGGGAAAACATCGACAATACTGGCCGTTGCAAGGAAGTTGTATGGGTCACAGTATGGCAACATGATTCTTGAACTCAATGCATCAGATGAGCGTGGTATTGATGTTGTAAGGCAGCAAATCCAAGACTTCGCAAGTGCCCGCAGTCTCTCTTTCGGAGCAAAGCAATCTGTTAAGATGGTTCTATTGGATGAAGCAGATGCCATGACCAAGGATGCACAGTTTGCATTGCGAAGAGTCATTGAGAAGCATACAAGGAGCACAAGGTTTGCGCTGATATGCAACCATGTGAACAAAATCATTCCAGCACTGCAATCAAGGTGCACCAGGTTTAGATTTGCACCCCTTGATGGCACTCATGTTAGGGAACGTCTTAAACATATAATACAATCCGAGGGGCTTGATGTAGATGACGGTGGTTTGACAGCCCTTGTGCGGTTAAGTAATGGTGATATGAGGAAGGCTTTGAACATATTGCAGTCAACACACATGGCATCTAAGCAAATAACAGAGGAAGCTGTGTACCTTTGCACAGGAAACCCCATGCCGAAAGACATTGAACAGATAGCATACTGGTTGCTGAATGAATCATTTTCAACCAGCTTCAAATGTATATCTGATATGAAGATGAGAAAAGGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGC TTGCAAT GACAAGTTACAGCT GGGGGCGCTGATATCAACTTTCACGGGTGCTCGCACGGCTATGGTTGCTGCTGCCCACTAATTTCAGCAAGGTGATGATCA TTTTGTTGCCCTTCACTGCCACTTCAATCTGGAAATGACGCGGCAATGCTCGTTATTATTATAAGCATGTGGTTAGCGTAAAGCTTAAAAGCATGGCGAGGAGAAATTTTATCTGTA GGGTTTGTCTGC TCGACGTGCTAGCTTCTGGGACTCGGGAGTGCCTTGTAATTGAACTGTAACCGAATTCTATCGGGTGTAACC GTGTAGGTGATGCAT GATGCGT GTAACGTTTTATGCAGTAGAAAATGTATTCACA                                                                        ]
[+] EMBL CA765572             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAATGGTGATATGAGGAAGGCTTTGAACATATTGCAGTCAACACACATGGCATCTAAGCAAATAACAGAGGAAGCTGTGTACCTTTGCACAGGAAACCCCATGCCGAAAGACATTGAACAGATAGCATACTGGTTGCTGAATGAATCATTTTCAACCAGCTTCAAATGTATATCTGATATGAAGATGAGAAAAGGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGC TTGCAAT GACAAGTTACAGCT GGGGGCGCTGATATCAACTTTCACGGGCGCTCGCACGGCTATGGTTGCTGCTGCCCACTAATTTCAGCAAGGTGATGATCATTTTTGTTGCCCTTCGCTGCCACTTCAATCTGGAAATGACGCGGCAATGCTCGTTATTATTATAAGCATGTGGTTAGCGTAAAGCTTAAAAGCATGGCGAGGAGAATTTTTATCTGTAGGGGTTTGTCTGCTTCGACGTGCTAGCTTCTGGGACTCGGGAGTGCCTTGTAATTGAACTGTAACCGAATTCTATCAGGTGTAACCGGGGTAGGTGATGCATGGATGCGTGGTAACGNTTTATGCAGTAGAAAATGTATTCACAGNTNCAGCACTTTGCGACGGNCAGAACTTTTTTGGGTCAAGNTACGAAGCAAGAAAGCAGGCCAGCCAAAAN]
[+] EMBL AU030045             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGGAAGCTGTGTACCTTTGCACAGGAAACCCCATGCCGAAAGACATTGAACAGATAGCATACTGGTTGCTGAATGAATCATTTTCAACCAGCTTCAAATGTATATCTGATATGAAGATGAGAAAAGGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGCTTTGCNATGGACAAGTTACA CTGGGGGGCGCTGATATC ACTTTCACGGGTGCTCGNCGGGCTATGGGTTCTGCTGCCCACTAATTTCAGC AGGNGATGATCA TTTTGTTGCCC TCACGGGCACTTCAACCTGG                                                                                                                                                                                                                                                                                                             ]


>consensus_8021#0 ATCTTCCATTTCTTCCCCTCGCCAAGGCGAGGCCGCGAGAGGGGTTTCGAATTGGCGCCA ACCATTCCCCCCGATTCCCTCCTCCAGCTCTAGGGTTTCCGCCTCTCTCTGCGCTACGCC ATGGCGGGAGCCACCGCCGCCACTCCGATGGACATCGACGCCGCCGCGCCGCCGCCGGGG GCGGCCGCCAAGGGCAAGGCGCCTCTCTCCTCCACTCCCGGCGGTAGGGCCGCGCCCTGG GTCGAGAAGTACCGCCCCCAATCCCTCGGCGATGTCGCCGCCCACCGCGACATCGTCGAC ACCATTGATAGGCTTACAAATGAGAACAGGCTTCCACATTTGTTGCTTTATGGGCCTCCG GGCACTGGGAAAACATCGACAATACTGGCCGTTGCAAGGAAGTTGTATGGGTCACAGTAT GGCAACATGATTCTTGAACTCAATGCATCAGATGAGCGTGGTATTGATGTTGTAAGGCAG CAAATCCAAGACTTCGCAAGTGCCCGCAGTCTCTCTTTCGGAGCAAAGCAATCTGTTAAG ATGGTTCTATTGGATGAAGCAGATGCCATGACCAAGGATGCACAGTTTGCATTGCGAAGA GTCATTGAGAAGCATACAAGGAGCACAAGGTTTGCGCTGATATGCAACCATGTGAACAAA ATCATTCCAGCACTGCAATCAAGGTGCACCAGGTTTAGATTTGCACCCCTTGATGGCACT CATGTTAGGGAACGTCTTAAACATATAATACAATCCGAGGGGCTTGATGTAGATGACGGT GGTTTGACAGCCCTTGTGCGGTTAAGTAATGGTGATATGAGGAAGGCTTTGAACATATTG CAGTCAACACACATGGCATCTAAGCAAATAACAGAGGAAGCTGTGTACCTTTGCACAGGA AACCCCATGCCGAAAGACATTGAACAGATAGCATACTGGTTGCTGAATGAATCATTTTCA ACCAGCTTCAAATGTATATCTGATATGAAGATGAGAAAAGGACTGGCCTTGGTTGATATC ATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAG CTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGCTTGCAATGACAAGTTA CAGCTGGGGGCGCTGATATCAACTTTCACGGGTGCTCGCACGGCTATGGTTGCTGCTGCC CACTAATTTCAGCAAGGTGATGATCATTTTGTTGCCCTTCACTGCCACTTCAATCTGGAA ATGACGCGGCAATGCTCGTTATTATTATAAGCATGTGGTTAGCGTAAAGCTTAAAAGCAT GGCGAGGAGAAATTTTATCTGTAGGGTTTGTCTGCTCGACGTGCTAGCTTCTGGGACTCG GGAGTGCCTTGTAATTGAACTGTAACCGAATTCTATCGGGTGTAACCGTGTAGGTGATGC ATGATGCGTGTAACGTTTTATGCAGTAGAAAATGTATTCACAGNTNCAGCACTTTGCGAC GGNCAGAACTTTTTTGGGTCAAGNTACGAAGCAAGAAAGCAGGCCAGCCAAAAN



consensusID : consensus_8021#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1454
fasta sequence
                              [CTCCAGCTCTAGGGTTTCCGCCTCTCTCTGCGCTACGCCATGGCGGGAGCCACCGCCGCCACTCCGATGGACATCGACGCCGCCGCGCCGCCGCCGGGGGCGGCCGCCAAGGGCAAGGCGCCTCTCTCCTCCACTCCCGGCGGTAGGGCCGCGCCCTGGGTCGAGAAGTACCGCCCCCAATCCCTCGGCGATGTCGCCGCCCACCGCGACATCGTCGACACCATTGATAGGCTTACAAATGAGAACAGGCTTCCACATTTGTTGCTTTATGGGCCTCCGGGCACTGGGAAAACATCGACAATACTGGCCGTTGCAAGGAAGTTGTATGGGTCACAGTATGGCAACATGATTCTTGAACTCAATGCATCAGATGAGCGTGGTATTGATGTTGTAAGGCAGCAAATCCAAGACTTCGCAAGTGCCCGCAGTCTCTCTTTCGGAGCAAAGCAATCTGTTAAGATGGTTCTATTGGATGAAGCAGATGCCATGACCAAGGATGCACAGTTTGCATTGCGAAGAGTCATTGAGAAGCATACAAGGAGCACAAGGTTTGCGCTGATATGCAACCATGTGAACAAAATCATTCCAGCACTGCAATCAAGGTGCACCAGGTTTAGATTTGCACCCCTTGATGGCACTCATGTTAGGGAACGTCTTAAACATATAATACAATCCGAGGGGCTTGATGTAGATGACGGTGGTTTGACAGCCCTTGTGCGGTTAAGTAATGGTGATATGAGGAAGGCTTTGAACATATTGCAGTCAACACACATGGCATCTAAGCAAATAACAGAGGAAGCTGTGTACCTTTGCACAGGAAACCCCATGCCGAAAGACATTGAACAGATAGCATACTGGTTGCTGAATGAATCATTTTCAACCAGCTTCAAATGTATTCTTAATTATCAAAGTATATCTGATATGAAGATGAGAAAAGGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGCTTGCAATGACAAGTTACAGCTGGGGGCGCTGATATCAACTTTCACGGGTGCTCGCACGGCTATGGTTGCTGCTGCCCACTAATTTCAGCAAGGTGATGATCATTTTGTTGCCCTTCACTGCCACTTCAATCTGGAAATGACGCGGCAATGTTCGTTATTATTATAAGCATGTGGTTAGCGTAAAGCTTAAAAGCATGGCGAGGAGAAATTTTATCTGTAGGGTTTGTTTGCTCGACGTGCTAGCTTTTGGGANTCGGGAGTGCCTTGTAATTGAANTGTAACNGAATTTTATCGGGTGTAACCGTGTAGGTGATGCATGATGCGTGTAACGTTTTATGCAGTAGAAAATGTATTCACAGTTCCAGCTAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AB038319             [CTCCAGCTCTAGGGTTTCCGCCTCTCTCTGCGCTACGCCATGGCGGGAGCCACCGCCGCCACTCCGATGGACATCGACGCCGCCGCGCCGCCGCCGGGGGCGGCCGCCAAGGGCAAGGCGCCTCTCTCCTCCACTCCCGGCGGTAGGGCCGCGCCCTGGGTCGAGAAGTACCGCCCCCAATCCCTCGGCGATGTCGCCGCCCACCGCGACATCGTCGACACCATTGATAGGCTTACAAATGAGAACAGGCTTCCACATTTGTTGCTTTATGGGCCTCCGGGCACTGGGAAAACATCGACAATACTGGCCGTTGCAAGGAAGTTGTATGGGTCACAGTATGGCAACATGATTCTTGAACTCAATGCATCAGATGAGCGTGGTATTGATGTTGTAAGGCAGCAAATCCAAGACTTCGCAAGTGCCCGCAGTCTCTCTTTCGGAGCAAAGCAATCTGTTAAGATGGTTCTATTGGATGAAGCAGATGCCATGACCAAGGATGCACAGTTTGCATTGCGAAGAGTCATTGAGAAGCATACAAGGAGCACAAGGTTTGCGCTGATATGCAACCATGTGAACAAAATCATTCCAGCACTGCAATCAAGGTGCACCAGGTTTAGATTTGCACCCCTTGATGGCACTCATGTTAGGGAACGTCTTAAACATATAATACAATCCGAGGGGCTTGATGTAGATGACGGTGGTTTGACAGCCCTTGTGCGGTTAAGTAATGGTGATATGAGGAAGGCTTTGAACATATTGCAGTCAACACACATGGCATCTAAGCAAATAACAGAGGAAGCTGTGTACCTTTGCACAGGAAACCCCATGCCGAAAGACATTGAACAGATAGCATACTGGTTGCTGAATGAATCATTTTCAACCAGCTTCAAATGTATTCTTAATTATCAAAGTATATCTGATATGAAGATGAGAAAAGGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGCTTGCAATGACAAGTTACAGCTGGGGGCGCTGATATCAACTTTCACGGGTGCTCGCACGGCTATGGTTGCTGCTGCCCACTAATTTCAGCAAGGTGATGATCATTTTGTTGCCCTTCACTGCCACTTCAATCTGGAAATGACGCGGCAATGTTCGTTATTATTATAAGCATGTGGTTAGCGTAAAGCTTAAAAGCATGGCGAGGAGAAATTTTATCTGTAGGGTTTGTTTGCTCGACGTGCTAGCTTTTGGGANTCGGGAGTGCCTTGTAATTGAANTGTAACNGAATTTTATCGGGTGTAACCGTGTAGGTGATGCATGATGCGTGTAACGTTTTATGCAGTAGAAAATGTATTCACAGTTCCAGCTAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8021#1 CTCCAGCTCTAGGGTTTCCGCCTCTCTCTGCGCTACGCCATGGCGGGAGCCACCGCCGCC ACTCCGATGGACATCGACGCCGCCGCGCCGCCGCCGGGGGCGGCCGCCAAGGGCAAGGCG CCTCTCTCCTCCACTCCCGGCGGTAGGGCCGCGCCCTGGGTCGAGAAGTACCGCCCCCAA TCCCTCGGCGATGTCGCCGCCCACCGCGACATCGTCGACACCATTGATAGGCTTACAAAT GAGAACAGGCTTCCACATTTGTTGCTTTATGGGCCTCCGGGCACTGGGAAAACATCGACA ATACTGGCCGTTGCAAGGAAGTTGTATGGGTCACAGTATGGCAACATGATTCTTGAACTC AATGCATCAGATGAGCGTGGTATTGATGTTGTAAGGCAGCAAATCCAAGACTTCGCAAGT GCCCGCAGTCTCTCTTTCGGAGCAAAGCAATCTGTTAAGATGGTTCTATTGGATGAAGCA GATGCCATGACCAAGGATGCACAGTTTGCATTGCGAAGAGTCATTGAGAAGCATACAAGG AGCACAAGGTTTGCGCTGATATGCAACCATGTGAACAAAATCATTCCAGCACTGCAATCA AGGTGCACCAGGTTTAGATTTGCACCCCTTGATGGCACTCATGTTAGGGAACGTCTTAAA CATATAATACAATCCGAGGGGCTTGATGTAGATGACGGTGGTTTGACAGCCCTTGTGCGG TTAAGTAATGGTGATATGAGGAAGGCTTTGAACATATTGCAGTCAACACACATGGCATCT AAGCAAATAACAGAGGAAGCTGTGTACCTTTGCACAGGAAACCCCATGCCGAAAGACATT GAACAGATAGCATACTGGTTGCTGAATGAATCATTTTCAACCAGCTTCAAATGTATTCTT AATTATCAAAGTATATCTGATATGAAGATGAGAAAAGGACTGGCCTTGGTTGATATCATA CGGGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAGCTG ATTAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGCTTGCAATGACAAGTTACAG CTGGGGGCGCTGATATCAACTTTCACGGGTGCTCGCACGGCTATGGTTGCTGCTGCCCAC TAATTTCAGCAAGGTGATGATCATTTTGTTGCCCTTCACTGCCACTTCAATCTGGAAATG ACGCGGCAATGTTCGTTATTATTATAAGCATGTGGTTAGCGTAAAGCTTAAAAGCATGGC GAGGAGAAATTTTATCTGTAGGGTTTGTTTGCTCGACGTGCTAGCTTTTGGGANTCGGGA GTGCCTTGTAATTGAANTGTAACNGAATTTTATCGGGTGTAACCGTGTAGGTGATGCATG ATGCGTGTAACGTTTTATGCAGTAGAAAATGTATTCACAGTTCCAGCTAAAAAAAAAAAA AAAAAAAAAAAAAA



consensusID : consensus_8021#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 620
fasta sequence
                              [TCGCCCCACGCGTCCGAAATTNCCAGAGGANGCTTGTGTNCCCTTTGCACAGGAAACCCCATNCCGAAAGACATTGAACAGATAGCATTACTGNTTGCTGAATGAATCATTTTCAACCAGCTTCAAATGTATATCTGATATGAANATGAGAAAAGGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGCTTGCAATGACAAGTTACAGCTGGGGGCGCTGATATCAACTTTCACGGGTGCTCGCACGGCTATGGTTGCTGCTGCCCACTAATTTCAGCAAGGTGATGATCATTTTGTTGCCCTTCACTGCCACTTCAATCTGGAAATGACGCGGCAATGCTCGTTATTATTATAAGCATGTGGTTAGCGTAAAGCTTAAAAGCATGGCGAGGAGAAATTTTATCTGTAGGGTTTGTCTGCTCGACGTGCTAGCTTCTGGGACTCGGGAGTGCCTTGTAATTGAACTGTAACCGAATTCTATCGGGNGTAACCGTGTNGGTNATGCAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU030046             [TCGCCCCACGCGTCCGAAATTNCCAGAGGANGCTTGTGTNCCCTTTGCACAGGAAACCCCATNCCGAAAGACATTGAACAGATAGCATTACTGNTTGCTGAATGAATCATTTTCAACCAGCTTCAAATGTATATCTGATATGAANATGAGAAAAGGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGCTTGCAATGACAAGTTACAGCTGGGGGCGCTGATATCAACTTTCACGGGTGCTCGCACGGCTATGGTTGCTGCTGCCCACTAATTTCAGCAAGGTGATGATCATTTTGTTGCCCTTCACTGCCACTTCAATCTGGAAATGACGCGGCAATGCTCGTTATTATTATAAGCATGTGGTTAGCGTAAAGCTTAAAAGCATGGCGAGGAGAAATTTTATCTGTAGGGTTTGTCTGCTCGACGTGCTAGCTTCTGGGACTCGGGAGTGCCTTGTAATTGAACTGTAACCGAATTCTATCGGGNGTAACCGTGTNGGTNATGCAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8021#2 TCGCCCCACGCGTCCGAAATTNCCAGAGGANGCTTGTGTNCCCTTTGCACAGGAAACCCC ATNCCGAAAGACATTGAACAGATAGCATTACTGNTTGCTGAATGAATCATTTTCAACCAG CTTCAAATGTATATCTGATATGAANATGAGAAAAGGACTGGCCTTGGTTGATATCATACG GGAGGTCACTATGTTTGTGTTCAAAATACAGATGCCATCTGATGTACGCATAAAGCTGAT TAATGATCTGGCTGATATCGAGTACCGGCTAAGCTTTGCTTGCAATGACAAGTTACAGCT GGGGGCGCTGATATCAACTTTCACGGGTGCTCGCACGGCTATGGTTGCTGCTGCCCACTA ATTTCAGCAAGGTGATGATCATTTTGTTGCCCTTCACTGCCACTTCAATCTGGAAATGAC GCGGCAATGCTCGTTATTATTATAAGCATGTGGTTAGCGTAAAGCTTAAAAGCATGGCGA GGAGAAATTTTATCTGTAGGGTTTGTCTGCTCGACGTGCTAGCTTCTGGGACTCGGGAGT GCCTTGTAATTGAACTGTAACCGAATTCTATCGGGNGTAACCGTGTNGGTNATGCAAAAA AAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8021#0      ATCTTCCATTTCTTCCCCTCGCCAAGGCGAGGCCGCGAGAGGGGTTTCGAATTGGCGCCA 60
consensus_8021#1      ------------------------------------------------------------
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      ACCATTCCCCCCGATTCCCTCCTCCAGCTCTAGGGTTTCCGCCTCTCTCTGCGCTACGCC 120
consensus_8021#1      ---------------------CTCCAGCTCTAGGGTTTCCGCCTCTCTCTGCGCTACGCC 39
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      ATGGCGGGAGCCACCGCCGCCACTCCGATGGACATCGACGCCGCCGCGCCGCCGCCGGGG 180
consensus_8021#1      ATGGCGGGAGCCACCGCCGCCACTCCGATGGACATCGACGCCGCCGCGCCGCCGCCGGGG 99
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      GCGGCCGCCAAGGGCAAGGCGCCTCTCTCCTCCACTCCCGGCGGTAGGGCCGCGCCCTGG 240
consensus_8021#1      GCGGCCGCCAAGGGCAAGGCGCCTCTCTCCTCCACTCCCGGCGGTAGGGCCGCGCCCTGG 159
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      GTCGAGAAGTACCGCCCCCAATCCCTCGGCGATGTCGCCGCCCACCGCGACATCGTCGAC 300
consensus_8021#1      GTCGAGAAGTACCGCCCCCAATCCCTCGGCGATGTCGCCGCCCACCGCGACATCGTCGAC 219
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      ACCATTGATAGGCTTACAAATGAGAACAGGCTTCCACATTTGTTGCTTTATGGGCCTCCG 360
consensus_8021#1      ACCATTGATAGGCTTACAAATGAGAACAGGCTTCCACATTTGTTGCTTTATGGGCCTCCG 279
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      GGCACTGGGAAAACATCGACAATACTGGCCGTTGCAAGGAAGTTGTATGGGTCACAGTAT 420
consensus_8021#1      GGCACTGGGAAAACATCGACAATACTGGCCGTTGCAAGGAAGTTGTATGGGTCACAGTAT 339
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      GGCAACATGATTCTTGAACTCAATGCATCAGATGAGCGTGGTATTGATGTTGTAAGGCAG 480
consensus_8021#1      GGCAACATGATTCTTGAACTCAATGCATCAGATGAGCGTGGTATTGATGTTGTAAGGCAG 399
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      CAAATCCAAGACTTCGCAAGTGCCCGCAGTCTCTCTTTCGGAGCAAAGCAATCTGTTAAG 540
consensus_8021#1      CAAATCCAAGACTTCGCAAGTGCCCGCAGTCTCTCTTTCGGAGCAAAGCAATCTGTTAAG 459
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      ATGGTTCTATTGGATGAAGCAGATGCCATGACCAAGGATGCACAGTTTGCATTGCGAAGA 600
consensus_8021#1      ATGGTTCTATTGGATGAAGCAGATGCCATGACCAAGGATGCACAGTTTGCATTGCGAAGA 519
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      GTCATTGAGAAGCATACAAGGAGCACAAGGTTTGCGCTGATATGCAACCATGTGAACAAA 660
consensus_8021#1      GTCATTGAGAAGCATACAAGGAGCACAAGGTTTGCGCTGATATGCAACCATGTGAACAAA 579
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      ATCATTCCAGCACTGCAATCAAGGTGCACCAGGTTTAGATTTGCACCCCTTGATGGCACT 720
consensus_8021#1      ATCATTCCAGCACTGCAATCAAGGTGCACCAGGTTTAGATTTGCACCCCTTGATGGCACT 639
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      CATGTTAGGGAACGTCTTAAACATATAATACAATCCGAGGGGCTTGATGTAGATGACGGT 780
consensus_8021#1      CATGTTAGGGAACGTCTTAAACATATAATACAATCCGAGGGGCTTGATGTAGATGACGGT 699
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      GGTTTGACAGCCCTTGTGCGGTTAAGTAATGGTGATATGAGGAAGGCTTTGAACATATTG 840
consensus_8021#1      GGTTTGACAGCCCTTGTGCGGTTAAGTAATGGTGATATGAGGAAGGCTTTGAACATATTG 759
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      CAGTCAACACACATGGCATCTAAGCAAATAACAGAGGAAGCT-GTGTACC-TTTGCACAG 898
consensus_8021#1      CAGTCAACACACATGGCATCTAAGCAAATAACAGAGGAAGCT-GTGTACC-TTTGCACAG 817
consensus_8021#2      ---TCGCCCCAC---GCGTCCGA--AATTNCCAGAGGANGCTTGTGTNCCCTTTGCACAG 52
                         **  * ***   ** **  *  ** *  ******* *** **** ** *********

consensus_8021#0      GAAACCCCATGCCGAAAGACATTGAACAGATAGCAT-ACTGGTTGCTGAATGAATCATTT 957
consensus_8021#1      GAAACCCCATGCCGAAAGACATTGAACAGATAGCAT-ACTGGTTGCTGAATGAATCATTT 876
consensus_8021#2      GAAACCCCATNCCGAAAGACATTGAACAGATAGCATTACTGNTTGCTGAATGAATCATTT 112
                      ********** ************************* **** ******************

consensus_8021#0      TCAACCAGCTTCAAATGTAT------------------ATCTGATATGAAGATGAGAAAA 999
consensus_8021#1      TCAACCAGCTTCAAATGTATTCTTAATTATCAAAGTATATCTGATATGAAGATGAGAAAA 936
consensus_8021#2      TCAACCAGCTTCAAATGTAT------------------ATCTGATATGAANATGAGAAAA 154
                      ********************                  ************ *********

consensus_8021#0      GGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATG 1059
consensus_8021#1      GGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATG 996
consensus_8021#2      GGACTGGCCTTGGTTGATATCATACGGGAGGTCACTATGTTTGTGTTCAAAATACAGATG 214
                      ************************************************************

consensus_8021#0      CCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGC 1119
consensus_8021#1      CCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGC 1056
consensus_8021#2      CCATCTGATGTACGCATAAAGCTGATTAATGATCTGGCTGATATCGAGTACCGGCTAAGC 274
                      ************************************************************

consensus_8021#0      TTTGCTTGCAATGACAAGTTACAGCTGGGGGCGCTGATATCAACTTTCACGGGTGCTCGC 1179
consensus_8021#1      TTTGCTTGCAATGACAAGTTACAGCTGGGGGCGCTGATATCAACTTTCACGGGTGCTCGC 1116
consensus_8021#2      TTTGCTTGCAATGACAAGTTACAGCTGGGGGCGCTGATATCAACTTTCACGGGTGCTCGC 334
                      ************************************************************

consensus_8021#0      ACGGCTATGGTTGCTGCTGCCCACTAATTTCAGCAAGGTGATGATCATTTTGTTGCCCTT 1239
consensus_8021#1      ACGGCTATGGTTGCTGCTGCCCACTAATTTCAGCAAGGTGATGATCATTTTGTTGCCCTT 1176
consensus_8021#2      ACGGCTATGGTTGCTGCTGCCCACTAATTTCAGCAAGGTGATGATCATTTTGTTGCCCTT 394
                      ************************************************************

consensus_8021#0      CACTGCCACTTCAATCTGGAAATGACGCGGCAATGCTCGTTATTATTATAAGCATGTGGT 1299
consensus_8021#1      CACTGCCACTTCAATCTGGAAATGACGCGGCAATGTTCGTTATTATTATAAGCATGTGGT 1236
consensus_8021#2      CACTGCCACTTCAATCTGGAAATGACGCGGCAATGCTCGTTATTATTATAAGCATGTGGT 454
                      *********************************** ************************

consensus_8021#0      TAGCGTAAAGCTTAAAAGCATGGCGAGGAGAAATTTTATCTGTAGGGTTTGTCTGCTCGA 1359
consensus_8021#1      TAGCGTAAAGCTTAAAAGCATGGCGAGGAGAAATTTTATCTGTAGGGTTTGTTTGCTCGA 1296
consensus_8021#2      TAGCGTAAAGCTTAAAAGCATGGCGAGGAGAAATTTTATCTGTAGGGTTTGTCTGCTCGA 514
                      **************************************************** *******

consensus_8021#0      CGTGCTAGCTTCTGGGACTCGGGAGTGCCTTGTAATTGAACTGTAACCGAATTCTATCGG 1419
consensus_8021#1      CGTGCTAGCTTTTGGGANTCGGGAGTGCCTTGTAATTGAANTGTAACNGAATTTTATCGG 1356
consensus_8021#2      CGTGCTAGCTTCTGGGACTCGGGAGTGCCTTGTAATTGAACTGTAACCGAATTCTATCGG 574
                      *********** ***** ********************** ****** ***** ******

consensus_8021#0      GTGTAACCGTGTAGGTGATGCATGATGCGTGTAACGTTTTATGCAGTAGAAAATGTATTC 1479
consensus_8021#1      GTGTAACCGTGTAGGTGATGCATGATGCGTGTAACGTTTTATGCAGTAGAAAATGTATTC 1416
consensus_8021#2      GNGTAACCGTGTNGGTNATGCAAAAAAAAAAAAA------AAAAAAAAAAAA-------- 620
                      * ********** *** *****  *       **      *   *  * ***        

consensus_8021#0      ACAGNTNCAGCACTTTGCGACGGNCAGAACTTTTTTGGGTCAAGNTACGAAGCAAGAAAG 1539
consensus_8021#1      ACAGTTCCAGCTAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------- 1454
consensus_8021#2      ------------------------------------------------------------
                                                                                  

consensus_8021#0      CAGGCCAGCCAAAAN 1554
consensus_8021#1      ---------------
consensus_8021#2      ---------------
                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)