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Oryza sativa
cluster # 8022 cluster # 8022       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8022#0 length = 1597 sequences # 3  
consensus_8022#1 length = 1529 sequences # 2  

consensusID : consensus_8022#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1597
fasta sequence
                              [AAAAAGGGAAGACCCCCTCGCGCAGAAACGAAAGCGGAGGCGTCCCCGGATTCCAGAAGCTTCTAGTAGCACAGTAGTAGCAGCCGCCGCCCTCGACGCGCGTCTGCTCGGGGTGCTCGCGGGAGGGGAGATCGAGGCGAGGGAGCTCGGGGGATCGATCGACGGGAGACCGTTGGAGCAGCAGAGCGCAATGCCGCGTGGGAGGCGGTAGGGATGGCGGCGGCGGCGGCGGCGGAGGCGGGAGTATGGCGAGGGGCGTAGCGCGCGCGGCGTCGTTCGGTGGCCGCGCCGCGACCGCGAGGTGGTGCTCGTACCGGCGCATCACGGTAGCCGTCTGCCTCGGGAACCTCGTCGCCGCGCTCCTCGTGCTCCGCTCCCTCACCTCCCTCGCCCCCACACCGCCCAAACGTGAGGAAGTGGTGGAGTATACGGAGGAGCAGATTAGGAAGGCGGAGGAGTCGATCCGGATTCGCCGCGAGGCGGAGCCCGTCGAGCTTGTCGAGGCGGTGAAGAATCTGCGGAAGATTTTCAGGCGGGAGGAGAAGAGGCGGAAGGAGTTGCCACTGGAGTTGAAGCAGAAGGTCTCGTATGAGATTGTGCAGCTCCTGCTCGATTTGGGGGATAACAGCAGTTTCGCTCAGCAACGAGAAGCAGTGGAATCATGGCGTTTCGAGAAGTTAAAAGATATAAAAAGTGCATCTATTCAGAACTCAACAAAGTTAGACCTCTCCAACGAGGAAGCAAGAACCTTAAAGCGAGCACTACAGTTCAACTGGCATGTGCTGCTGGAAGACATTGGTCTTTGGATACCATCAGAAGTCTCACACACTGAACATGATGACAAACCTGAGAATGAACCAGAAGAAGAAGAGATAATAGCTGGTCCACCTTTGCCCTCACAATGCAATGCTGAGCTACATACTGATTACGATGGTGCTGCTGTTAGATGGGGCTTAACACACCCCAAAGAATCTGCTGCCGATTGCTGTCAAGCATGTCTAGACCAGGCTAAGAATGCCAGGCCAGGTGAACTAAGGTGTAATATATGGGTTTATTGCCCATCAGAGTTTGGATGTTTCTCTCCAGATAAATATGAGCATAAACATCAGGAGTGCTGGTTGAAACAGGCTGACCACCCTAAACTCAACTTCAAAGACAAGTATTCCGAGTCATACAGAGATTCTCATCCCACTGCCCCTGTCGTTGTGCCCTGGATGTCAGGTGTCATCAGCGCATGAGCTGTTAGTCCCCAGAGGCTCATCTGAGATTGGGAGATTTGTACCGATGAAAAACTTAACCAAAGCAACTTCATATACCGATTCTTCCTCGTTTTTTTTTTCTTTTGCCATGATACGTTTCTCTTTCTCTTGTCTTGGGTATATACGAATATGATGTAAACCTTAGATTAGTCGTTCTGATAGCAAAAGGTTCATTTGAGGGAGGCTTATTTTGTGGCCAAGGGAATGTGAGTAGACTGATTAAATACAATGGTTCCATCAAGAGAAATGATGGTGCTCTTGCACATTTTCCGCTCCAATTCTTTTGTCTCTGATCACGAACTTTCCTAAAGCACCATTCGGATTACTAATCCAAAACG]

[+] EMBL AK120494             [AAAAAGGGAAGACCCCCTCGCGCAGAAACGAAAGCGGAGGCGTCCCCGGATTCCAGAAGCTTCTAGTAGCACAGTAGTAGCAGCCGCCGCCCTCGACGCGCGTCTGCTCGGGGTGCTCGCGGGAGGGGAGATCGAGGCGAGGGAGCTCGGGGGATCGATCGACGGGAGACCGTTGGAGCAGCAGAGCGCAATGCCGCGTGGGAGGCGGTAGGGATGGCGGCGGCGGCGGCGGCGGAGGCGGGAGTATGGCGAGGGGCGTAGCGCGCGCGGCGTCGTTCGGTGGCCGCGCCGCGACCGCGAGGTGGTGCTCGTACCGGCGCATCACGGTAGCCGTCTGCCTCGGGAACCTCGTCGCCGCGCTCCTCGTGCTCCGCTCCCTCACCTCCCTCGCCCCCACACCGCCCAAACGTGAGGAAGTGGTGGAGTATACGGAGGAGCAGATTAGGAAGGCGGAGGAGTCGATCCGGATTCGCCGCGAGGCGGAGCCCGTCGAGCTTGTCGAGGCGGTGAAGAATCTGCGGAAGATTTTCAGGCGGGAGGAGAAGAGGCGGAAGGAGTTGCCACTGGAGTTGAAGCAGAAGGTCTCGTATGAGATTGTGCAGCTCCTGCTCGATTTGGGGGATAACAGCAGTTTCGCTCAGCAACGAGAAGCAGTGGAATCATGGCGTTTCGAGAAGTTAAAAGATATAAAAAGTGCATCTATTCAGAACTCAACAAAGTTAGACCTCTCCAACGAGGAAGCAAGAACCTTAAAGCGAGCACTACAGTTCAACTGGCATGTGCTGCTGGAAGACATTGGTCTTTGGATACCATCAGAAGTCTCACACACTGAACATGATGACAAACCTGAGAATGAACCAGAAGAAGAAGAGATAATAGCTGGTCCACCTTTGCCCTCACAATGCAATGCTGAGCTACATACTGATTACGATGGTGCTGCTGTTAGATGGGGCTTAACACACCCCAAAGAATCTGCTGCCGATTGCTGTCAAGCATGTCTAGACCAGGCTAAGAATGCCAGGCCAGGTGAACTAAGGTGTAATATATGGGTTTATTGCCCATCAGAGTTTGGATGTTTCTCTCCAGATAAATATGAGCATAAACATCAGGAGTGCTGGTTGAAACAGGCTGACCACCCTAAACTCAACTTCAAAGACAAGTATTCCGAGTCATACAGAGATTCTCATCCCACTGCCCCTGTCGTTGTGCCCTGGATGTCAGGTGTCATCAGCGCATGAGCTGTTAGTCCCCAGAGGCTCATCTGAGATTGGGAGATTTGTACCGATGAAAAACTTAACCAAAGCAACTTCATATACCGATTCTTCCTCGTTTTTTTTTTCTTTTGCCATGATACGTTTCTCTTTCTCTTGTCTTGGGTATATACGAATATGATGTAAACCTTAGATTAGTCGTTCTGATAGCAAAAGGTTCATTTGAGGGAGGCTTATTTTGTGGCCAAGGGAATGTGAGTAGACTGATTAAATACAATGGTTCCATCAAGAGAAATGATGGTGCTCTTGCACATTTTCCGCTCCAATTCTTTTGTCTCTGATCACGAACTTTCCTAAAGCACCATTCGGATTACTAATCCAAAACG]
[+] EMBL CF330913             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGTAATATATGGGTTTATTGCCCATCAGAGTTTGGATGTTTCTCTCCAGATAAATATGAGCATAAACATCAGGAGTGCTGGTTGAAACAGGCTGACCACCCTAAACTCAACTTCAAAGACAAGTATTCCGAGTCATACAGAGATTCTCATCCCACTGCCCCTGTCGTTGTGCCCTGGATGTCAGGTGTCATCAGCGCATGAGCTGTTAGTCCCCAGAGGCTCATCTGAGATTGGGAGATTTGTACCGATGAAAAACTTAACCAAAGCAACTTCATATACCGATTCTTCCTCGTTTTTTTTTTCTTTTGCCATGATACGTTTCTCTTTCTCTTGTCTTGGGTATATACGAATATGATGTAAACCTTAGATTAGTCGTTCTGATAGCAAAAGGTTCATTTGAGGGAGGC                                                                                                                                                         ]
[+] EMBL BI892451             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGTTGAAACAGGCTGACCACCCTAAACTCAACTTCAAAGACAAGTATTCCGAGTCATACAGAGATTCTCATCCCACTGCCCCTGTCGTTGTGCCCTGGATGTCAGGTGTCATCAGCGCATGAGCTGTTAGTCCCCAGAGGCTCATCTGAGATTGGGAGATTTGTACCGATGAAAAACTTAACCAAAGCAACTTCATATACCGATTCTTCCTCGTTTTTTTTTTCTTTTGCCATGATACGTTTCTCTTTCTCTTGTCTTGGGTATATACGAATATGATGTAAACCTTAGATTAGTCGTTCTGATAGCAAAAGGTTCATTTGAGGGAGGCTTATTTTGTGGCCAAGGGAATGTGAGTAGACTGATTAAATACAATGGTTCCATCAAGAGAAATGATGGTGCTCTTGCACATTTTCCGC                                                                 ]


>consensus_8022#0 AAAAAGGGAAGACCCCCTCGCGCAGAAACGAAAGCGGAGGCGTCCCCGGATTCCAGAAGC TTCTAGTAGCACAGTAGTAGCAGCCGCCGCCCTCGACGCGCGTCTGCTCGGGGTGCTCGC GGGAGGGGAGATCGAGGCGAGGGAGCTCGGGGGATCGATCGACGGGAGACCGTTGGAGCA GCAGAGCGCAATGCCGCGTGGGAGGCGGTAGGGATGGCGGCGGCGGCGGCGGCGGAGGCG GGAGTATGGCGAGGGGCGTAGCGCGCGCGGCGTCGTTCGGTGGCCGCGCCGCGACCGCGA GGTGGTGCTCGTACCGGCGCATCACGGTAGCCGTCTGCCTCGGGAACCTCGTCGCCGCGC TCCTCGTGCTCCGCTCCCTCACCTCCCTCGCCCCCACACCGCCCAAACGTGAGGAAGTGG TGGAGTATACGGAGGAGCAGATTAGGAAGGCGGAGGAGTCGATCCGGATTCGCCGCGAGG CGGAGCCCGTCGAGCTTGTCGAGGCGGTGAAGAATCTGCGGAAGATTTTCAGGCGGGAGG AGAAGAGGCGGAAGGAGTTGCCACTGGAGTTGAAGCAGAAGGTCTCGTATGAGATTGTGC AGCTCCTGCTCGATTTGGGGGATAACAGCAGTTTCGCTCAGCAACGAGAAGCAGTGGAAT CATGGCGTTTCGAGAAGTTAAAAGATATAAAAAGTGCATCTATTCAGAACTCAACAAAGT TAGACCTCTCCAACGAGGAAGCAAGAACCTTAAAGCGAGCACTACAGTTCAACTGGCATG TGCTGCTGGAAGACATTGGTCTTTGGATACCATCAGAAGTCTCACACACTGAACATGATG ACAAACCTGAGAATGAACCAGAAGAAGAAGAGATAATAGCTGGTCCACCTTTGCCCTCAC AATGCAATGCTGAGCTACATACTGATTACGATGGTGCTGCTGTTAGATGGGGCTTAACAC ACCCCAAAGAATCTGCTGCCGATTGCTGTCAAGCATGTCTAGACCAGGCTAAGAATGCCA GGCCAGGTGAACTAAGGTGTAATATATGGGTTTATTGCCCATCAGAGTTTGGATGTTTCT CTCCAGATAAATATGAGCATAAACATCAGGAGTGCTGGTTGAAACAGGCTGACCACCCTA AACTCAACTTCAAAGACAAGTATTCCGAGTCATACAGAGATTCTCATCCCACTGCCCCTG TCGTTGTGCCCTGGATGTCAGGTGTCATCAGCGCATGAGCTGTTAGTCCCCAGAGGCTCA TCTGAGATTGGGAGATTTGTACCGATGAAAAACTTAACCAAAGCAACTTCATATACCGAT TCTTCCTCGTTTTTTTTTTCTTTTGCCATGATACGTTTCTCTTTCTCTTGTCTTGGGTAT ATACGAATATGATGTAAACCTTAGATTAGTCGTTCTGATAGCAAAAGGTTCATTTGAGGG AGGCTTATTTTGTGGCCAAGGGAATGTGAGTAGACTGATTAAATACAATGGTTCCATCAA GAGAAATGATGGTGCTCTTGCACATTTTCCGCTCCAATTCTTTTGTCTCTGATCACGAAC TTTCCTAAAGCACCATTCGGATTACTAATCCAAAACG



consensusID : consensus_8022#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1529
fasta sequence
                              [CCGCCTCGCTGCTCCCCGAATCCTCCTCCTCCCTCCTCCGCCGAAACGGCGCCGCTCGCCTGAAGCGAACGCGCGGCGCGCGCGCGCGCGTGGCGGCGTGCGGAGCGCACAACTCGTGCTTGGCGGGCGGCGAGAAACCCTAGGGGCGATAGGAAGGATGGTACTGGCTGTGGCGGCGGCGGCGGCGGCGGCGCCATGATGAGGGGTTTAGGGCCGGCTGCGGCGGCGGCGCTCGGAGGCCGCTCGGCGGCGAGGTGGTGCACGTACCGGCGCGTCACAGTCGCCGTATGCCTGGGGAACCTCGTCGCCGTGCTGCTCGTGGTCCGCTCGCTCTACTCCGCCCCCGGCTACTTCGCCTCCGCGCCCAGACGCGTGGCGGTGAAGTATTCGGAGGAGCAGATTAGGCTGGTCGAGGAGTCCATCCGGATTCGCCGCGCAGCCGTGTCCGTCGAGCTCGTGGAAGCTGTGAAAAAGCTGGAGAAGGTGTTCGCTAGGGAGGAGAAGAGACGGAAGGAGTTGCCGCTCGAGCTGAAGCAGAAGGTTTCCTATGAGATTTTAGAGAGGATGCGTGATTTGGGGGAGAACAGCAACACGACCGAACAACGAGAAGCTTTAGAGTCCTGGCGTTTAGAGAAGCTGAAAGACATCAGAAGTGCATCTGCTCAGAATTTGTCGATGTCAGACCTCTCTAATGAGGAATCAAGGATGTTAAAACGAGCATTGGAGTTAAATTGGTGAATGCTAATGGACGACATTGGCCTTTGGATACCTGTTAGTGTATGGCATACTGAACATGATGACAAGCCTGAGAATGAACCAGAAGAAGAAGAGATAATAGCAGGTCCACCTTTACCCCCAGAATGCAATGCTCAAGTACATACCGATTACGGTGGTGCTGCTGTTCGATGGGGCTTAACACATCATAAAGAAAGTGCAGCTGATTGCTGTCAAGCTTGTCTTGATCAGGCTAAAAGGGCCAGACCAGGGGCATTAAAGTGCAATATATGGGTTTACTGTCCATCAGAGTATGGATGCTACTCGCCAGATAAATATGAACACAAACATCAAGAGTGCTGGTTGAAACAGGCTGATCACCCTAAATTGAACTTCAAAGACAGGTATTCTGAGTCGTACAGGGATGCTCATCCATCTGCTCCCGTTGTTGTGCCATGGATGTCAGGTGTCATCACTGTATGAGCTGCCTACAGGCTATCTAGTATCTACTGCCTGCAGGAGACAGGAACTCCGTTCGGATGTGCAACGCCACATCAAATTTGGTACAGTTCCACGAACTCATATACCAATTTTCAAAATTCTTCTTGGCTTTTGTAGTCTTTAGATTAGTCTAGACGGTTAGCTAGAGTTCATGTGAGATAGCTGGTGTATTTTTTGGATGGACGGTTGGTGGCGAACTCTTTTTCGAAGAAGAAAAAGTAGAAAAAGTAGAAAAAGAGTACAAATGATTAAAGTTGAAATCATTGTGTTTGCCTGCCCGGTACTTATGTTACAGCTGTGTTGATGCGCTGGGT]

[+] EMBL AK064799             [CCGCCTCGCTGCTCCCCGAATCCTCCTCCTCCCTCCTCCGCCGAAACGGCGCCGCTCGCCTGAAGCGAACGCGCGGCGCGCGCGCGCGCGTGGCGGCGTGCGGAGCGCACAACTCGTGCTTGGCGGGCGGCGAGAAACCCTAGGGGCGATAGGAAGGATGGTACTGGCTGTGGCGGCGGCGGCGGCGGCGGCGCCATGATGAGGGGTTTAGGGCCGGCTGCGGCGGCGGCGCTCGGAGGCCGCTCGGCGGCGAGGTGGTGCACGTACCGGCGCGTCACAGTCGCCGTATGCCTGGGGAACCTCGTCGCCGTGCTGCTCGTGGTCCGCTCGCTCTACTCCGCCCCCGGCTACTTCGCCTCCGCGCCCAGACGCGTGGCGGTGAAGTATTCGGAGGAGCAGATTAGGCTGGTCGAGGAGTCCATCCGGATTCGCCGCGCAGCCGTGTCCGTCGAGCTCGTGGAAGCTGTGAAAAAGCTGGAGAAGGTGTTCGCTAGGGAGGAGAAGAGACGGAAGGAGTTGCCGCTCGAGCTGAAGCAGAAGGTTTCCTATGAGATTTTAGAGAGGATGCGTGATTTGGGGGAGAACAGCAACACGACCGAACAACGAGAAGCTTTAGAGTCCTGGCGTTTAGAGAAGCTGAAAGACATCAGAAGTGCATCTGCTCAGAATTTGTCGATGTCAGACCTCTCTAATGAGGAATCAAGGATGTTAAAACGAGCATTGGAGTTAAATTGGTGAATGCTAATGGACGACATTGGCCTTTGGATACCTGTTAGTGTATGGCATACTGAACATGATGACAAGCCTGAGAATGAACCAGAAGAAGAAGAGATAATAGCAGGTCCACCTTTACCCCCAGAATGCAATGCTCAAGTACATACCGATTACGGTGGTGCTGCTGTTCGATGGGGCTTAACACATCATAAAGAAAGTGCAGCTGATTGCTGTCAAGCTTGTCTTGATCAGGCTAAAAGGGCCAGACCAGGGGCATTAAAGTGCAATATATGGGTTTACTGTCCATCAGAGTATGGATGCTACTCGCCAGATAAATATGAACACAAACATCAAGAGTGCTGGTTGAAACAGGCTGATCACCCTAAATTGAACTTCAAAGACAGGTATTCTGAGTCGTACAGGGATGCTCATCCATCTGCTCCCGTTGTTGTGCCATGGATGTCAGGTGTCATCACTGTATGAGCTGCCTACAGGCTATCTAGTATCTACTGCCTGCAGGAGACAGGAACTCCGTTCGGATGTGCAACGCCACATCAAATTTGGTACAGTTCCACGAACTCATATACCAATTTTCAAAATTCTTCTTGGCTTTTGTAGTCTTTAGATTAGTCTAGACGGTTAGCTAGAGTTCATGTGAGATAGCTGGTGTATTTTTTGGATGGACGGTTGGTGGCGAACTCTTTTTCGAAGAAGAAAAAGTAGAAAAAGTAGAAAAAGAGTACAAATGATTAAAGTTGAAATCATTGTGTTTGCCTGCCCGGTACTTATGTTACAGCTGTGTTGATGCGCTGGGT]
[-] EMBL CA759659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          agAGGCCGAGCCAAGGGGCCTTAAAGTCCAATATATGGGTTTACCGTCCCTCAGAGTATGGATGCTACTCGCCAGATAAATATGAACCCAAACATCAAGAGTGCTGGTTGAAACAGGCTGATCCCCCTCAATTGAACTTCAAAGACAGGTATTTTGAGTCGTACAGGGATGCTCATCCATCTGCTCCCGTTGTTGTGCCATGGATGTCAGGTGTCATCACTGTATGAGCTGCCTACCGGCTATCTAGTATTTACTGCCTGCAGGAGACAGGAACTCCGTTTGGATGTGCAACGCCCCATCAAATTTGGTACAGTTCCACGAACTCATATACCAATTTTCAAAATTCTTCTTGGCTTTTGTAGTCTTTAGATTAGTCTAGACGGTTAGCTAGAGTTCATGTGAGATAGCTGGTGTATTTTTTGGATGGACGGTTGGTGGCGAACTCTTTTTCGAAGAAGAAAAAGTAGAAAAAGTAGAAAAAGAGTTCAAATGATTCCAGTTGAAAaaaaaa                                                ]


>consensus_8022#1 CCGCCTCGCTGCTCCCCGAATCCTCCTCCTCCCTCCTCCGCCGAAACGGCGCCGCTCGCC TGAAGCGAACGCGCGGCGCGCGCGCGCGCGTGGCGGCGTGCGGAGCGCACAACTCGTGCT TGGCGGGCGGCGAGAAACCCTAGGGGCGATAGGAAGGATGGTACTGGCTGTGGCGGCGGC GGCGGCGGCGGCGCCATGATGAGGGGTTTAGGGCCGGCTGCGGCGGCGGCGCTCGGAGGC CGCTCGGCGGCGAGGTGGTGCACGTACCGGCGCGTCACAGTCGCCGTATGCCTGGGGAAC CTCGTCGCCGTGCTGCTCGTGGTCCGCTCGCTCTACTCCGCCCCCGGCTACTTCGCCTCC GCGCCCAGACGCGTGGCGGTGAAGTATTCGGAGGAGCAGATTAGGCTGGTCGAGGAGTCC ATCCGGATTCGCCGCGCAGCCGTGTCCGTCGAGCTCGTGGAAGCTGTGAAAAAGCTGGAG AAGGTGTTCGCTAGGGAGGAGAAGAGACGGAAGGAGTTGCCGCTCGAGCTGAAGCAGAAG GTTTCCTATGAGATTTTAGAGAGGATGCGTGATTTGGGGGAGAACAGCAACACGACCGAA CAACGAGAAGCTTTAGAGTCCTGGCGTTTAGAGAAGCTGAAAGACATCAGAAGTGCATCT GCTCAGAATTTGTCGATGTCAGACCTCTCTAATGAGGAATCAAGGATGTTAAAACGAGCA TTGGAGTTAAATTGGTGAATGCTAATGGACGACATTGGCCTTTGGATACCTGTTAGTGTA TGGCATACTGAACATGATGACAAGCCTGAGAATGAACCAGAAGAAGAAGAGATAATAGCA GGTCCACCTTTACCCCCAGAATGCAATGCTCAAGTACATACCGATTACGGTGGTGCTGCT GTTCGATGGGGCTTAACACATCATAAAGAAAGTGCAGCTGATTGCTGTCAAGCTTGTCTT GATCAGGCTAAAAGGGCCAGACCAGGGGCATTAAAGTGCAATATATGGGTTTACTGTCCA TCAGAGTATGGATGCTACTCGCCAGATAAATATGAACACAAACATCAAGAGTGCTGGTTG AAACAGGCTGATCACCCTAAATTGAACTTCAAAGACAGGTATTCTGAGTCGTACAGGGAT GCTCATCCATCTGCTCCCGTTGTTGTGCCATGGATGTCAGGTGTCATCACTGTATGAGCT GCCTACAGGCTATCTAGTATCTACTGCCTGCAGGAGACAGGAACTCCGTTCGGATGTGCA ACGCCACATCAAATTTGGTACAGTTCCACGAACTCATATACCAATTTTCAAAATTCTTCT TGGCTTTTGTAGTCTTTAGATTAGTCTAGACGGTTAGCTAGAGTTCATGTGAGATAGCTG GTGTATTTTTTGGATGGACGGTTGGTGGCGAACTCTTTTTCGAAGAAGAAAAAGTAGAAA AAGTAGAAAAAGAGTACAAATGATTAAAGTTGAAATCATTGTGTTTGCCTGCCCGGTACT TATGTTACAGCTGTGTTGATGCGCTGGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8022#0      AAAAAGGGAAGACCCCCTCGCGCAGAAACGAAAGCGGAGGCGTCCCCGGATTCCAGAAGC 60
consensus_8022#1      -------------------------------CCGCCTCGCTGCTCCCCGAATCCTCCTCC 29
                                                       **   *  *  *** ** ***     *

consensus_8022#0      TTCTAGTAGCACAGTAGTAGCAGCCGCCGCCCTCGACGCGCGTCTGCTCGGGGTGCTCGC 120
consensus_8022#1      TCCCTCCTCCGCCGAAACGGCGCCGCTCGCCTGAAGCGAACGCGCGGCGCGCGCGCGCGC 89
                      * *      * * * *   **  *   ****     **  **   *    * * ** ***

consensus_8022#0      GGGAGGGGAGATCGAGGCGAGGGAGCTCGGGGGATCGATCGACGGGAGACCGTTGGAGCA 180
consensus_8022#1      GTG-GCGGCGTGCGGAGCGCACAACTCGTGCTTGGCGGGCGGCGAGAAACCCTAGGGGCG 148
                      * * * ** *  **  ***    *     *     **  ** ** ** *** * ** ** 

consensus_8022#0      GCAGAGCGCAATGCCGCGTGGGAGGCGGTAGGGATGGCGGCGGCGGCGGCGGCGGAGGCG 240
consensus_8022#1      ATAGGAAG-GATGGTACT-----GGCTGTGGCGGCGGCGGCGGCGGCGGCGCCATGATGA 202
                        **   *  ***   *      *** ** * *  **************** *       

consensus_8022#0      GGAGTATGGCGAGGGGCGTAGCGCGCGCGGCGTCGTTCGGTGGCCGCGCCGCGACCGCGA 300
consensus_8022#1      GGGGTTTAGGGCCGGCTGCGG------CGGCGGCGCTCGGAGGCCGCTCGGCG---GCGA 253
                      ** ** * * *  **  *  *      ***** ** **** ****** * ***   ****

consensus_8022#0      GGTGGTGCTCGTACCGGCGCATCACGGTAGCCGTCTGCCTCGGGAACCTCGTCGCCGCGC 360
consensus_8022#1      GGTGGTGCACGTACCGGCGCGTCACAGTCGCCGTATGCCTGGGGAACCTCGTCGCCGTGC 313
                      ******** *********** **** ** ***** ***** **************** **

consensus_8022#0      TCCTCGTGCTCCGCTCCCTCACCTCCCTCGCCC-CCACACCGCCCAAACGTGAGGA---- 415
consensus_8022#1      TGCTCGTGGTCCGCTCGCTCTACTCCGCCCCCGGCTACTTCGCCTCCGCGCCCAGACGCG 373
                      * ****** ******* ***  ****  * **  * **  ****    **    **    

consensus_8022#0      -AGTGGTGGAGTATACGGAGGAGCAGATTAGGAAGGCGGAGGAGTCGATCCGGATTCGCC 474
consensus_8022#1      TGGCGGTGAAGTATTCGGAGGAGCAGATTAGGCTGGTCGAGGAGTCCATCCGGATTCGCC 433
                        * **** ***** *****************  **  ******** *************

consensus_8022#0      GCGAGGCGGAGCCCGTCGAGCTTGTCGAGGCGGTGAAGAATCTGCGGAAGATTTTCAGGC 534
consensus_8022#1      GCGCAGCCGTGTCCGTCGAGCTCGTGGAAGCTGTGAAAAAGCTGGAGAAGGTGTTCGCTA 493
                      ***  ** * * ********** ** ** ** ***** ** ***  **** * ***    

consensus_8022#0      GGGAGGAGAAGAGGCGGAAGGAGTTGCCACTGGAGTTGAAGCAGAAGGTCTCGTATGAGA 594
consensus_8022#1      GGGAGGAGAAGAGACGGAAGGAGTTGCCGCTCGAGCTGAAGCAGAAGGTTTCCTATGAGA 553
                      ************* ************** ** *** ************* ** *******

consensus_8022#0      TTGTGCAGCTCCTGCTCGATTTGGGGGATAACAGCAGTTTCGCTCAGCAACGAGAAGCAG 654
consensus_8022#1      TTTTAGAGAGGATGCGTGATTTGGGGGAGAACAGCAACACGACCGAACAACGAGAAGCTT 613
                      ** *  **    ***  *********** *******      *  * ***********  

consensus_8022#0      TGGAATCATGGCGTTTCGAGAAGTTAAAAGATATAAAAAGTGCATCTATTCAGAACTCAA 714
consensus_8022#1      TAGAGTCCTGGCGTTTAGAGAAGCTGAAAGACATCAGAAGTGCATCTGCTCAGAATTTGT 673
                      * ** ** ******** ****** * ***** ** * **********  ****** *   

consensus_8022#0      CAAAGTTAGACCTCTCCAACGAGGAAGCAAGAACCTTAAAGCGAGCACTACAGTTCAACT 774
consensus_8022#1      CGATGTCAGACCTCTCTAATGAGGAATCAAGGATGTTAAAACGAGCATTGGAGTTAAATT 733
                      * * ** ********* ** ****** **** *  ***** ****** *  **** ** *

consensus_8022#0      GGCATGTGCTGCTGGAAGACATTGGTCTTTGGATACCATCAGAAGTCTCACACACTGAAC 834
consensus_8022#1      GGTGAATGCTAATGGACGACATTGGCCTTTGGATACCTGTTAGTGTATGGCATACTGAAC 793
                      **    ****  **** ******** ***********       ** *  ** *******

consensus_8022#0      ATGATGACAAACCTGAGAATGAACCAGAAGAAGAAGAGATAATAGCTGGTCCACCTTTGC 894
consensus_8022#1      ATGATGACAAGCCTGAGAATGAACCAGAAGAAGAAGAGATAATAGCAGGTCCACCTTTAC 853
                      ********** *********************************** *********** *

consensus_8022#0      CCTCACAATGCAATGCTGAGCTACATACTGATTACGATGGTGCTGCTGTTAGATGGGGCT 954
consensus_8022#1      CCCCAGAATGCAATGCTCAAGTACATACCGATTACGGTGGTGCTGCTGTTCGATGGGGCT 913
                      ** ** *********** *  ******* ******* ************* *********

consensus_8022#0      TAACACACCCCAAAGAATCTGCTGCCGATTGCTGTCAAGCATGTCTAGACCAGGCTAAGA 1014
consensus_8022#1      TAACACATCATAAAGAAAGTGCAGCTGATTGCTGTCAAGCTTGTCTTGATCAGGCTAAAA 973
                      ******* *  ******  *** ** ************** ***** ** ******** *

consensus_8022#0      ATGCCAGGCCAGGTGAACTAAGGTGTAATATATGGGTTTATTGCCCATCAGAGTTTGGAT 1074
consensus_8022#1      GGGCCAGACCAGGGGCATTAAAGTGCAATATATGGGTTTACTGTCCATCAGAGTATGGAT 1033
                        ***** ***** * * *** *** ************** ** ********** *****

consensus_8022#0      GTTTCTCTCCAGATAAATATGAGCATAAACATCAGGAGTGCTGGTTGAAACAGGCTGACC 1134
consensus_8022#1      GCTACTCGCCAGATAAATATGAACACAAACATCAAGAGTGCTGGTTGAAACAGGCTGATC 1093
                      * * *** ************** ** ******** *********************** *

consensus_8022#0      ACCCTAAACTCAACTTCAAAGACAAGTATTCCGAGTCATACAGAGATTCTCATCCCACTG 1194
consensus_8022#1      ACCCTAAATTGAACTTCAAAGACAGGTATTCTGAGTCGTACAGGGATGCTCATCCATCTG 1153
                      ******** * ************* ****** ***** ***** *** *******  ***

consensus_8022#0      CCCCTGTCGTTGTGCCCTGGATGTCAGGTGTCATCAGCGCATGAGCTGTTAGTCCCCAGA 1254
consensus_8022#1      CTCCCGTTGTTGTGCCATGGATGTCAGGTGTCATCACTGTATGAGCTG------CCTACA 1207
                      * ** ** ******** *******************  * ********      ** * *

consensus_8022#0      GGCTCATCTGAGATTGGGAGATTTGTACCGATGAAAAACTTAACCAAAGCAACTTCATAT 1314
consensus_8022#1      GGCT-ATCTAGTATC-------TACTGCCTGCAGGAGAC--------AGGAACTCCGTTC 1251
                      **** ****   **        *  * **      * **        ** **** * *  

consensus_8022#0      ACCGATTCTTCCTCGTTTTTTTTTTCTTTTGCCATGATACGTTTCTCTTTCTCTTGTCTT 1374
consensus_8022#1      GGATGTGCAACGCCACATCAAATTTGGTACAGTTCCACGAACTCATATACCAATTTTCAA 1311
                           * *  *  *   *    ***  *        *     *  * *  *  ** **  

consensus_8022#0      GGGTATATACGAATATGATGTAAACCTTAGATTAGTCGTTCTGATAGCAAAAGGTTCATT 1434
consensus_8022#1      AATTCTTCTTGGCTTT--TGTAGTCTTTAGATTAGTCTAGACGGTTAGCTAGAGTTCATG 1369
                         * *    *  * *  ****  * ***********     * *     *  ****** 

consensus_8022#0      TGAGGGAG---GCTTATTTTGTGGCCAAGGGAATGTGAGTAGACTGATTAAATACAATGG 1491
consensus_8022#1      TGAGATAGCTGGTGTATTTTTTGGATGGACGGTTGGTGGCGAACTCTTTTTCGAAGAAGA 1429
                      ****  **   *  ****** ***      *  **   *   ***  **    *  * * 

consensus_8022#0      TTCCATCAAGAGAAATGATGGTGCTCTTGCACATTTTCCGCTCCAATTCTTTTGTCT--C 1549
consensus_8022#1      AAAAGTAGAAAAAGTAGAAAAAGAGTACAAATGATTAAAGTTGAAATCATTGTGTTTGCC 1489
                           *  * * *   **    *       *   **   * *  ***  ** *** *  *

consensus_8022#0      TGATCACGAACTTTCCTAAAGCACCATTCGGATTACTAATCCAAAACG 1597
consensus_8022#1      TGCCCGGTACTTATGTTACAGCTGTGTT-GATGCGCTGGGT------- 1529
                      **  *   *  * *  ** ***    ** *     **           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)