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Oryza sativa
cluster # 8035 cluster # 8035       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8035#0 length = 860 sequences # 5  

consensusID : consensus_8035#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 860
fasta sequence
                              [TCTCTCTCTCTCTCTTCTCGAAGCGCCTCCACCGATCTCGAATTCTCTCGATCCAGGCAAGGAGGGAGGAGGATGGCGAGGGGCGAGAACAACACCGGCGCGCACGGCAGCGGCAACGTGCCTCCTCCCGCCACCGCCGCGTCCACGGCGGCGGGGACGGCGGCCGCGTCCGGGAAGCAGCAGGCGCGGGGGGCGGGGGCGGAGGGGCAGTCGGTGGTGCGGCGGCTGCAGTCGGAGCTGATGGCGCTGATGATGGGCGGCGACCCGGGCGTGTCCGCGTTCCCGGAGGGGGACAACATCTTCAGCTGGGTGGGCACCATCGCCGGGTCCGCCGCGACGGCGTACGAGGGCACCTCCTACCGCCTCTCCCTCGCCTTCCCCGGCGAGTACCCGTACAAGCCGCCCAAGGTGAGGTTCGAAACCCCCTGCTTCCACCCAAACGTGGACGCCCACGGCAACATCTGCCTCGACATCCTCCAGGACAAGTGGTCCTCCGCCTACGACGTCCGCACCATCCTCCTCTCCATCCAGAGCC-TCCTCGGCGAGCCCAACAACGACTCCCCCCTCAACATCCAGGCCGCCGCCCTCTGGCCTAACCAGGACGAGTTCAGGAAGATGGTCGAGAAGCTCTACAAGCCCACCGCGTAGAAGTTGGTGGCGCCTTCGCCCGGCGATCTGATCTGGCCTTCTCACCTTGAATCGATGATGATTCGAATGCGATTGTTGTGCGAGTCGGATTGGAACTGTTCGATCTGTAATTTTTTTTTGTTGGTTGTTTGAATGATTCATTTGTTTCGATGT-AAANATGCTTGCCGTCGACAAGATGTGGTCATACTGGAATTTATATATGAGAAACAAAT]

[+] EMBL AK105320             [TCTCTCTCTCTCTCTTCTCGAAGCGCCTCCACCGATCTCGAATTCTCTCGATCCAGGCAAGGAGGGAGGAGGATGGCGAGGGGCGAGAACAACACCGGCGCGCACGGCAGCGGCAACGTGCCTCCTCCCGCCACCGCCGCGTCCACGGCGGCGGGGACGGCGGCCGCGTCCGGGAAGCAGCAGGCGCGGGGGGCGGGGGCGGAGGGGCAGTCGGTGGTGCGGCGGCTGCAGTCGGAGCTGATGGCGCTGATGATGGGCGGCGACCCGGGCGTGTCCGCGTTCCCGGAGGGGGACAACATCTTCAGCTGGGTGGGCACCATCGCCGGGTCCGCCGCGACGGCGTACGAGGGCACCTCCTACCGCCTCTCCCTCGCCTTCCCCGGCGAGTACCCGTACAAGCCGCCCAAGGTGAGGTTCGAAACCCCCTGCTTCCACCCAAACGTGGACGCCCACGGCAACATCTGCCTCGACATCCTCCAGGACAAGTGGTCCTCCGCCTACGACGTCCGCACCATCCTCCTCTCCATCCAGAGCC TCCTCGGCGAGCCCAACAACGACTC                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA756795             [                                                                                                                                                                                                                                                                                  CCGCGTTCCCGGAGGGGGACAACATCTTCAGCTGGGTGGGCACCATCGCCGGGTCCGCCGCGACGGCGTACGAGGGCACCTCCTACCGCCTCTCCCTCGCCTTCCCCGGCGAGTACCCGTACAAGCCGCCCAAGGTGAGGTTCGAAACCCCCTGCTTCCACCCAAACGTGGACGCCCACGGCAACATCTGCCTCGACATCCTCCAGGACAAGTGGTCCTCCGCCTACGACGTCCGCACCATCCTCCTCTCCATCCAGAGCC TCCTCGGCGAGCCCAACAACGACTC                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU029921             [                                                                                                                                                                                                                                                                                                                                                                               CCCTCGCNTTCCCCGGCGANTACCCGTACAAGCCGCCCAAGGTGAGGTTCGAAACCCCCTGCTTCCACCCAAACGTGGACGCCCACGGCAACATCTGCCTCGACATCCTCCAGGACAAGTGGTCCTCCGCCTACGACGTCCGCACCATCCTCCTCTCCATCCAGAGCCTTCCTCGGCGAGCCCAACAACGACTCCCCCCTCAACATCCAGGCCGCCGCCCTCTGGCCTAACCAGGACGAGTTCAGGAAGATGGTCGAGAAGCTCTACAAGCCCACCGCGTAGAAGTTGGTGGCGCCTTCGCCCGGCGATCTGATCTGGCCTTCTCACCTTGAATCGATGATGATTCGAATGCGATTGTTGTGCGAGTCGGATTGGAACTGTTCGATCTGTAATTTTTTTTTGTTGGTTGTTTGAATGATTCATTTGTTTCGATGT AAANA                                                      ]
[+] EMBL AU058299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGCCGCCCTCTGGCCTAACCAGGACGAGTTCAGGAAGATGGTCGAGAAGCTCTACAAGCCCACCGCGTAGAAGTTGGTGGCGCCTTCGCCCGGCGATCTGATCTGGCCTTCTCACCTTGAATCGATGATGATTCGAATGCGATTGTTGTGCGAGTCGGATTGGAACTGTTCGATCTGTAATTTTTTTTTGTTGGTTGTTTGAATGATTCATTTGTTTCGATGTNAAAN                                                       ]
[-] EMBL AU181601             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGGACGAGTTCAGGAAGATGGTCGAGAAGCTCTACAAGCCCACCGCGTAGAAGTTGGTGGCGCCTTCGCCCGGCGATCTGATCTGGCCTTCTCACCTTGAATCGATGATGATTCGAATGCGATTGTTGTGCGAGTCGGATTGGAACTGTTCGATCTGTAATTTTTTTTTGTTGGTTGTTTGAATGATTCATTTGTTTCGATGT AAGAGTGCTTGCCGTCGACAAGATGTGGTCATACTGGAATTTATATATGAGAAACAAAT]


>consensus_8035#0 TCTCTCTCTCTCTCTTCTCGAAGCGCCTCCACCGATCTCGAATTCTCTCGATCCAGGCAA GGAGGGAGGAGGATGGCGAGGGGCGAGAACAACACCGGCGCGCACGGCAGCGGCAACGTG CCTCCTCCCGCCACCGCCGCGTCCACGGCGGCGGGGACGGCGGCCGCGTCCGGGAAGCAG CAGGCGCGGGGGGCGGGGGCGGAGGGGCAGTCGGTGGTGCGGCGGCTGCAGTCGGAGCTG ATGGCGCTGATGATGGGCGGCGACCCGGGCGTGTCCGCGTTCCCGGAGGGGGACAACATC TTCAGCTGGGTGGGCACCATCGCCGGGTCCGCCGCGACGGCGTACGAGGGCACCTCCTAC CGCCTCTCCCTCGCCTTCCCCGGCGAGTACCCGTACAAGCCGCCCAAGGTGAGGTTCGAA ACCCCCTGCTTCCACCCAAACGTGGACGCCCACGGCAACATCTGCCTCGACATCCTCCAG GACAAGTGGTCCTCCGCCTACGACGTCCGCACCATCCTCCTCTCCATCCAGAGCCTCCTC GGCGAGCCCAACAACGACTCCCCCCTCAACATCCAGGCCGCCGCCCTCTGGCCTAACCAG GACGAGTTCAGGAAGATGGTCGAGAAGCTCTACAAGCCCACCGCGTAGAAGTTGGTGGCG CCTTCGCCCGGCGATCTGATCTGGCCTTCTCACCTTGAATCGATGATGATTCGAATGCGA TTGTTGTGCGAGTCGGATTGGAACTGTTCGATCTGTAATTTTTTTTTGTTGGTTGTTTGA ATGATTCATTTGTTTCGATGTAAANATGCTTGCCGTCGACAAGATGTGGTCATACTGGAA TTTATATATGAGAAACAAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)