These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8039#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1246 fasta sequence [TACCATTGCAAGAAACCCTTCACATCTTACTGAAACAGCTACTACTCCTGCTAGCTAGCTCAAGCTCAAGCTCAATCTCAAGCTCTTTCCACTAAGCTCCGTGTGTCTAGCTCATCAATACCTGGCTAGCTAGCTAGTTGCTTGATCGATATATATCCTAGCTAAGTGATGGACTTCGACTTGTTCAATTCCTACCCGGAATCGCAGCTTGACCTGATGAGCACGATGCTTCAGCTGGAGCAGCTCACTGCGCTCAGTGACCAGTCGCTGTTCATGGCGGCGCCGACGTCGCCGCCGGTATCACCCATGGGGACCCCTTCTCCCCAGTTCTCACCACCGCCGCAGATGTCGGTCACCACCA-CCACCGCCGGTGGCGGTTACCAGGATCAGTATAACTCCATGCCGGCAACGTACGGCGCCGGTGCGGGCGTGCACCAGCTGGACTTCGCGATGTCGTCACCGGGCTCCGACTCCGGCGCGCCGCAGGGCTCGTCGTCGTCGTCCTCGTCGGAGGCGATGCGGGAGATGATCTTCCACATCGCGGCGCTGCAGCCGGTGGAGATCGACCCGGAGGCCGTGCGGCCGCCGAAGCGGCGCAACGTGCGCATCTCCAAGGACCCGCAGAGCGTGGCGGCGCGGCTGCGGCGGGAGCGCATCAGCGAGCGCATCCGCATCCTGCAGCGGCTCGTCCCGGGCGGCACCAAGATGGACACCGCCTCCATGCTCGACGAGGCCATCCACTACGTCAAGTTCCTCAAGTCCCAGGTGCAGTCCCTCGAGCGCGCCGCCGCCGCCACCGGCGCCGCCGCCCACCGCGCCGCCGCATTCGGCGCCGCCTACCCAGCTGCCTTACCCATGCAGCACCACGCTCCGTGGTAGCTGCACGCTACTAGCTCCCACATGGATAGATGGTGATGAGACAATCGTTTCCCATTACTATCGCGTCTCACATGCTTGTCGCCGTCGTCGTCGTCGATCGATCAATCACCACTGCTGCTGCTGCAGCATGCATGATCACATGCATGTGTAAATTAGTAGTACAAGATGTAGGAGACTACCTGATTACTAGTACCATTTATTATTGCTGTTGTACGTTACCGCATGCTAGCTCGTACGTACGTGGCTGCTCCGAGCTTTTGTTGGACTCGCAGCCCGTACGTGCATGCGCGTTTCATTCGACCGTAGGCTTGTACTGTACTGTACACATTTCCTTCTATTCTACCCCCCTGTTCAATGCAGTACGTTT] [+] EMBL AK060477 [TACCATTGCAAGAAACCCTTCACATCTTACTGAAACAGCTACTACTCCTGCTAGCTAGCTCAAGCTCAAGCTCAATCTCAAGCTCTTTCCACTAAGCTCCGTGTGTCTAGCTCATCAATACCTGGCTAGCTAGCTAGTTGCTTGATCGATATATATCCTAGCTAAGTGATGGACTTCGACTTGTTCAATTCCTACCCGGAATCGCAGCTTGACCTGATGAGCACGATGCTTCAGCTGGAGCAGCTCACTGCGCTCAGTGACCAGTCGCTGTTCATGGCGGCGCCGACGTCGCCGCCGGTATCACCCATGGGGACCCCTTCTCCCCAGTTCTCACCACCGCCGCAGATGTCGGTCACCACCA CCACCGCCGGTGGCGGTTACCAGGATCAGTATAACTCCATGCCGGCAACGTACGGCGCCGGTGCGGGCGTGCACCAGCTGGACTTCGCGATGTCGTCACCGGGCTCCGACTCCGGCGCGCCGCAGGGCTCGTCGTCGTCGTCCTCGTCGGAGGCGATGCGGGAGATGATCTTCCACATCGCGGCGCTGCAGCCGGTGGAGATCGACCCGGAGGCCGTGCGGCCGCCGAAGCGGCGCAACGTGCGCATCTCCAAGGACCCGCAGAGCGTGGCGGCGCGGCTGCGGCGGGAGCGCATCAGCGAGCGCATCCGCATCCTGCAGCGGCTCGTCCCGGGCGGCACCAAGATGGACACCGCCTCCATGCTCGACGAGGCCATCCACTACGTCAAGTTCCTCAAGTCCCAGGTGCAGTCCCTCGAGCGCGCCGCCGCCGCCACCGGCGCCGCCGCCCACCGCGCCGCCGCATTCGGCGCCGCCTACCCAGCTGCCTTACCCATGCAGCACCACGCTCCGTGGTAGCTGCACGCTACTAGCTCCCACATGGATAGATGGTGATGAGACAATCGTTTCCCATTACTATCGCGTCTCACATGCTTGTCGCCGTCGTCGTCGTCGATCGATCAATCACCACTGCTGCTGCTGCAGCATGCATGATCACATGCATGTGTAAATTAGTAGTACAAGATGTAGGAGACTACCTGATTACTAGTACCATTTATTATTGCTGTTGTACGTTACCGCATGCTAGCTCGTACGTACGTGGCTGCTCCGAGCTTTTGTTGGACTCGCAGCCCGTACGTGCATGCGCGTTTCATTCGACCGTAGGCTTGTACTGTACTGTACACATTTCCTTCTATTCTACCCCCCTGTTCAATGCAGTA ] [+] EMBL AK070458 [ CCATTGCAAGAAACCCTTCACATCTTACTGAAACAGCTACTACTCCTGCTAGCTAGCTCAAGCTCAAGCTCAATCTCAAGCTCTTTCCACTAAGCTCCGTGTGTCTAGCTCATCAATACCTGGCTAGCTAGCTAGTTGCTTGATCGATATATATCCTAGCTAAGTGATGGACTTCGACTTGTTCAATTCCTACCCGGAATCGCAGCTTGACCTGATGAGCACGATGCTTCAGCTGGAGCAGCTCACTGCGCTCAGTGACCAGTCGCTGTTCATGGCGGCGCCGACGTCGCCGCCGGTATCACCCATGGGGACCCCTTCTCCCCAGTTCTCACCACCGCCGCAGATGTCGGTCACCACCA CCACCGCCGGTGGCGGTTACCAGGATCAGTATAACTCCATGCCGGCAACGTACGGCGCCGGTGCGGGCGTGCACCAGCTGGACTTCGCGATGTCGTCACCGGGCTCCGACTCCGGCGCGCCGCAGGGCTCGTCGTCGTCGTCCTCGTCGGAGGCGATGCGGGAGATGATCTTCCACATCGCGGCGCTGCAGCCGGTGGAGATCGACCCGGAGGCCGTGCGGCCGCCGAAGCGGCGCAACGTGCGCATCTCCAAGGACCCGCAGAGCGTGGCGGCGCGGCTGCGGCGGGAGCGCATCAGCGAGCGCATCCGCATCCTGCAGCGGCTCGTCCCGGGCGGCACCAAGATGGACACCGCCTCCATGCTCGACGAGGCCATCCACTACGTCAAGTTCCTCAAGTCCCAGGTGCAGTCCCTCGAGCGCGCCGCCGCCGCCACCGGCGCCGCCGCCCACCGCGCCGCCGCATTCGGCGCCGCCTACCCAGCTGCCTTACCCATGCAGCACCACGCTCCGTGGTAGCTGCACGCTACTAGCTCCCACATGGATAGATGGTGATGAGACAATCGTTTCCCATTACTATCGCGTCTCACATGCTTGTCGCCGTCGTCGTCGTCGATCGATCAATCACCACTGCTGCTGCTGCAGCATGCATGATCACATGCATGTGCAAATTAGTAGTACAAGATGTAGGAGACTACCTGATTACTAGTACCATTTATTATTGCTGTTGTACGTTACCGCATGCTAGCTCGTACGTACGTGGCTGCTCCGAGCTTTTGTTGGACTCGCAGCCCGTACGTGCATGCGCGTTTCATTCGACCGTAGGCTTGTACTGTACTGTACACATTTCCTTCTATTCTACCCCCCTGTTCAATGCAGTACGTTT] [+] EMBL CF304883 [ AACCCTTCACATCTTACTGAAACAGCTACTACTCCTGCTAGCTAGCTCAAGCTCAAGCTCAATCTCAAGCTCTTTCCACTAAGCTCCGTGTGTCTAGCTCATCAATACCTGGCTAGCTAGCTAGTTGCTTGATCGATATATATCCTAGCTAAGTGATGGACTTCGACTTGTTCAATTCCTACCCGGAATCGCAGCTTGACCTGATGAGCACGATGCTTCAGCTGGAGCAGCTCACTGCGCTCAGTGACCAGTC ] [+] EMBL CB652841 [ CTTCACATCTTACTGAAACAGCTACTACTCCTGCTAGCTAGCTCAAGCTCAAGCTCAATCTCAAGCTCTTTCCACTAAGCTCCGTGTGTCTAGCTCATCAATACCTGGCTAGCTAGCTAGTTGCTTGATCGATATATATCCTAGCTAAGTGATGGACTTCGACTTGTTCAATTCCTACCCGGAATCGCAGCTTGACCTGATGAGCACGATGCTTCAGCTGGAGCAGCTCACCGCGCTCAGTGACCAGTCGCTGTTCATGGCGGCGCCGACGTCGCCGCCGGTATCACCCATGGGGACCCCTTCTCCCCAGTTCTCACCACCGCCGCAGATGTCGGTCACCACCA CCACCGCCGGTGGCGGTTACCAGGATCAGTATAACTCCATGCCGGCAACGTACGGCGCCGGTGCGGGCGTGCACCAGCTGGACTTCGCGATGTCGTCACCGGGCTCCGACTCCGGCGCGCCGCAGGGCTCGTCGTCGTCGTCCTCGTCGGAGGCGATGCGGGAGATGATCTTCCACATCGCGGCGCTGCAGCCGGTGGAGATCGACCCGGAGGCCGTGCGGCCGCCGAAGCGGCGCAACGTGCGCATCTCCAAGGACCCGCAGAGCGTGGCGGCGCGGCTGCGGCGGGAGCGCATCAGCGAGCGCATCCGCATCCTGCAGCGGCTCGTCCCGGGCGGCACCAAGATGGACACCGCCTCCATGCTCGACGAGGCCATCCACTACGTCAAGTTCCTCAAGTCCCAG ] [-] EMBL AU071086 [ taACTACTCCTGCTAGCTAGCTCAAGCTCAAGCTCAATCTCAAGCTCTTTCCACTAAGCTCCGTGTGTCTAGCTCATCAATACCTGGCTAGCTAGCTAGTTGCTTGATCGATATATATCCTAGCTAAGTGATGGACTTCGACTTGTTCAATTCCTACCCGGAATCGCAGCTTGACCTGATGAGCACGATGCTTCAGCTGGAGCAGCTCACTGCGCTCAGTGACCAGTCGCTGTTCATGGCGGCGCCGACGTCGCCGCCGGTATCACCCATGGGGACCCCTTCTCCCCAGTTCTCACCACCGCCGCAGATGTCGGTCACCACCANCCANCGCCGGTGGCGGTTACCAGGATCAGTATAACTCCATGCCGGCAACGTACGGCGCCGGTGCGGGCGTGCACCAGCTGGACTTCGCGATGTCGTCACCGGGCTCCGACTCCGGCGCGCCGCAGGGCTCGTCGTCGTCGTCCTCGTCGGAGGCGATGCGGGAGATGATCTTCCACATCGCGGCGCTGCAGCCGGTGGAGATCGACCCGGACGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||