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Oryza sativa
cluster # 8040 cluster # 8040       Sequences # 5       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8040#0 length = 1616 sequences # 1  
consensus_8040#1 length = 678 sequences # 1  
consensus_8040#2 length = 488 sequences # 1  
consensus_8040#3 length = 431 sequences # 1  
consensus_8040#4 length = 318 sequences # 1  

consensusID : consensus_8040#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1616
fasta sequence
                              [TTCCTCGAGCACTGTTGGCCTACTGGATCAATCGCTGTCATCTCATCTCCCAACCTTTTTTTTCTTACCCTCGCGGAAATCTAATCCTTTTTTTTTTTTCAATTTCGATTTAGTTGCTGTTCGTCCTCCTCCACCAAGAATCACCCACCCGCGAGATCCAATCCAATCCTCTCGCTTGCATTTTCTGCTGCTGCGTGCGCGTGCTGAGATTTCATTCGGATTTGTTGGGGGTTCGCTGAGATCGGAGATGACGTCGCCGGCGACGACGTACGCCTCGCCGTTCGTGCTGTCGGTGCTCCTCCTCGTCTCCATCCCGGTCATCTTCCTCCTCGCGCCGCGCCTCCTCCCGCCCAAGACGCTTCCGGCCATCCCGGACGCCGACGAGTCCGACGACCTCGCGCTCTTCCGCCGCGCCATACTCTCCTCCTCCTCCCCCTCCTCCGCCACGCCCACGCCCTCCTCCGCCGCGTCCTACTTCTTCCGCCGCCGCCCCGCCCCCAAGGTCGCCTTCCTCTTCCTCACCAACTCCGACCTCGTCTTCTCCCCGCTCTGGGAGAAGTTCTTCCGCGGCCACCACCACCTCTTCAACCTCTACGTCCACGCCGACCCTTTCTCCGCCCTCACGATGCCGCCGACGCCCTCGTTCCGCGGCCGATTCGTCCCGGCCAAGGCCACGCAGCGCGCCTCCCCCACCCTCATCTCCGCCGCCCGCCGCCTCATCGCCACCGCCCTGCTCGACGACCCATCCAACCAGTTCTTCGCTCTCCTCTCGCAATCCTGCATCCCGCTCCACCCGTTCCCCACGCTGTACAACACGCTCCTCTCCGACAATGCCGGGCCTCATGGCCGCCACCGCAGCTTCATCGAGATAATGGACGATGCCTACATGATTCATGATAGGTACTATGCCCGAGGCGACGATGTGATGCTCCCGGAGGTGCCGTACGACCAGTTCCGGTTCGGGTCGCAGTTCTTTGTGTTGACGAGGAAGCATGCCATCATGGTCGTCAGGGACATGAAGCTATGGAGGAAGTTTAAGCTTCCTTGCCTGATCAAGCGCAGAGACTCGTGCTATCCAGAGGAGCACTACTTCCCGACATTGCTGGATATGCAAGACCCCGAAGGCTGCACCGGGTATACTCTGACAAGGGTGAACTGGACGGATCAAGTCGAGGGCCACCCTCACACATACCGGCCTGGGGAGGTGTCTGCAAGCCTGATCAAGGAGCTGAGGAAATCAAATGGGACATACTCGTACATGTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGAGCCACTGATGGAGATTGCAGACTCTGTCATCCTACGTGACTAATCCAGCAACAACACCACATTTCAGGGTGTCGGAATTTGTACACTGAGGTGAATGAGGTATGGATATGTACTGTTGCTAAGGTGGTGTCAAAAAGATCTAATCTTCTTTTAGGTGTTGTGTTGGAGACAATGTCACTGAATGGAGTGTACATAGTATGAAATGCGGGAATTTTAGGTTGTTCTGTAATTTGTATGCTTAACACTTACGCAATAAAGTGGCATGCTACATCAAGAGTGTTGTTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]

[+] EMBL AK109329             [TTCCTCGAGCACTGTTGGCCTACTGGATCAATCGCTGTCATCTCATCTCCCAACCTTTTTTTTCTTACCCTCGCGGAAATCTAATCCTTTTTTTTTTTTCAATTTCGATTTAGTTGCTGTTCGTCCTCCTCCACCAAGAATCACCCACCCGCGAGATCCAATCCAATCCTCTCGCTTGCATTTTCTGCTGCTGCGTGCGCGTGCTGAGATTTCATTCGGATTTGTTGGGGGTTCGCTGAGATCGGAGATGACGTCGCCGGCGACGACGTACGCCTCGCCGTTCGTGCTGTCGGTGCTCCTCCTCGTCTCCATCCCGGTCATCTTCCTCCTCGCGCCGCGCCTCCTCCCGCCCAAGACGCTTCCGGCCATCCCGGACGCCGACGAGTCCGACGACCTCGCGCTCTTCCGCCGCGCCATACTCTCCTCCTCCTCCCCCTCCTCCGCCACGCCCACGCCCTCCTCCGCCGCGTCCTACTTCTTCCGCCGCCGCCCCGCCCCCAAGGTCGCCTTCCTCTTCCTCACCAACTCCGACCTCGTCTTCTCCCCGCTCTGGGAGAAGTTCTTCCGCGGCCACCACCACCTCTTCAACCTCTACGTCCACGCCGACCCTTTCTCCGCCCTCACGATGCCGCCGACGCCCTCGTTCCGCGGCCGATTCGTCCCGGCCAAGGCCACGCAGCGCGCCTCCCCCACCCTCATCTCCGCCGCCCGCCGCCTCATCGCCACCGCCCTGCTCGACGACCCATCCAACCAGTTCTTCGCTCTCCTCTCGCAATCCTGCATCCCGCTCCACCCGTTCCCCACGCTGTACAACACGCTCCTCTCCGACAATGCCGGGCCTCATGGCCGCCACCGCAGCTTCATCGAGATAATGGACGATGCCTACATGATTCATGATAGGTACTATGCCCGAGGCGACGATGTGATGCTCCCGGAGGTGCCGTACGACCAGTTCCGGTTCGGGTCGCAGTTCTTTGTGTTGACGAGGAAGCATGCCATCATGGTCGTCAGGGACATGAAGCTATGGAGGAAGTTTAAGCTTCCTTGCCTGATCAAGCGCAGAGACTCGTGCTATCCAGAGGAGCACTACTTCCCGACATTGCTGGATATGCAAGACCCCGAAGGCTGCACCGGGTATACTCTGACAAGGGTGAACTGGACGGATCAAGTCGAGGGCCACCCTCACACATACCGGCCTGGGGAGGTGTCTGCAAGCCTGATCAAGGAGCTGAGGAAATCAAATGGGACATACTCGTACATGTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGAGCCACTGATGGAGATTGCAGACTCTGTCATCCTACGTGACTAATCCAGCAACAACACCACATTTCAGGGTGTCGGAATTTGTACACTGAGGTGAATGAGGTATGGATATGTACTGTTGCTAAGGTGGTGTCAAAAAGATCTAATCTTCTTTTAGGTGTTGTGTTGGAGACAATGTCACTGAATGGAGTGTACATAGTATGAAATGCGGGAATTTTAGGTTGTTCTGTAATTTGTATGCTTAACACTTACGCAATAAAGTGGCATGCTACATCAAGAGTGTTGTTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]


>consensus_8040#0 TTCCTCGAGCACTGTTGGCCTACTGGATCAATCGCTGTCATCTCATCTCCCAACCTTTTT TTTCTTACCCTCGCGGAAATCTAATCCTTTTTTTTTTTTCAATTTCGATTTAGTTGCTGT TCGTCCTCCTCCACCAAGAATCACCCACCCGCGAGATCCAATCCAATCCTCTCGCTTGCA TTTTCTGCTGCTGCGTGCGCGTGCTGAGATTTCATTCGGATTTGTTGGGGGTTCGCTGAG ATCGGAGATGACGTCGCCGGCGACGACGTACGCCTCGCCGTTCGTGCTGTCGGTGCTCCT CCTCGTCTCCATCCCGGTCATCTTCCTCCTCGCGCCGCGCCTCCTCCCGCCCAAGACGCT TCCGGCCATCCCGGACGCCGACGAGTCCGACGACCTCGCGCTCTTCCGCCGCGCCATACT CTCCTCCTCCTCCCCCTCCTCCGCCACGCCCACGCCCTCCTCCGCCGCGTCCTACTTCTT CCGCCGCCGCCCCGCCCCCAAGGTCGCCTTCCTCTTCCTCACCAACTCCGACCTCGTCTT CTCCCCGCTCTGGGAGAAGTTCTTCCGCGGCCACCACCACCTCTTCAACCTCTACGTCCA CGCCGACCCTTTCTCCGCCCTCACGATGCCGCCGACGCCCTCGTTCCGCGGCCGATTCGT CCCGGCCAAGGCCACGCAGCGCGCCTCCCCCACCCTCATCTCCGCCGCCCGCCGCCTCAT CGCCACCGCCCTGCTCGACGACCCATCCAACCAGTTCTTCGCTCTCCTCTCGCAATCCTG CATCCCGCTCCACCCGTTCCCCACGCTGTACAACACGCTCCTCTCCGACAATGCCGGGCC TCATGGCCGCCACCGCAGCTTCATCGAGATAATGGACGATGCCTACATGATTCATGATAG GTACTATGCCCGAGGCGACGATGTGATGCTCCCGGAGGTGCCGTACGACCAGTTCCGGTT CGGGTCGCAGTTCTTTGTGTTGACGAGGAAGCATGCCATCATGGTCGTCAGGGACATGAA GCTATGGAGGAAGTTTAAGCTTCCTTGCCTGATCAAGCGCAGAGACTCGTGCTATCCAGA GGAGCACTACTTCCCGACATTGCTGGATATGCAAGACCCCGAAGGCTGCACCGGGTATAC TCTGACAAGGGTGAACTGGACGGATCAAGTCGAGGGCCACCCTCACACATACCGGCCTGG GGAGGTGTCTGCAAGCCTGATCAAGGAGCTGAGGAAATCAAATGGGACATACTCGTACAT GTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGAGCCACTGATGGAGATTGCAGACTCTGT CATCCTACGTGACTAATCCAGCAACAACACCACATTTCAGGGTGTCGGAATTTGTACACT GAGGTGAATGAGGTATGGATATGTACTGTTGCTAAGGTGGTGTCAAAAAGATCTAATCTT CTTTTAGGTGTTGTGTTGGAGACAATGTCACTGAATGGAGTGTACATAGTATGAAATGCG GGAATTTTAGGTTGTTCTGTAATTTGTATGCTTAACACTTACGCAATAAAGTGGCATGCT ACATCAAGAGTGTTGTTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT



consensusID : consensus_8040#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence
                              [GTACTATGCCCGAGGTGACGATGTGATGCTCCCGGAGGTGCCGTACGACCAGTTCCGGTTCGGGTCGCAGTTCTTTGTGTTGACGAGGAAGCATGCCATCATGGTCGTCAGGGACATGAAGCTATGGAGGAAGTTTAAGCTTCCTTGCCTGATCAAGCGCAGAGACTCGTGCTATCCAGAGGAGCACTACTTCCCGACATTGCTGGATATGCAAGACCCCGAAGGCTGCACCGGGTATACTCTGACAAGGGTGAACCGGACGGATCAAGTCGAGGGCCACCCTCACACATACCGGCCTGGGGAGGTGTCTGCAAGCCTGATCAAGGAGCTGAGGAAATCAAATGGGACATACTCGTACATGTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGGGCCACTGATGGAGATTGCAGACTCTGTCATCCTACGTGACTAATCCAGCAACAACACCACATTTCAGGGTGTCGGAATTTGTACACTGAGGTGAATGAGGTATGGATATGTACTGTTGCTAAGGTGGTGTCAAAAAGATCTAATCTTCTTTTAGGTGTTGTGTTGGAGACAATGTCACTGAATGGAGTGTACATAGTATGAAATGCGGGAATTTTAGGTTGTTCTGTAATTTGTATGCTTAACACTTACGCAATAAAGTGGCATGCTACATCAAAAAAAAAAAAA]

[-] EMBL CA763046             [GTACTATGCCCGAGGTGACGATGTGATGCTCCCGGAGGTGCCGTACGACCAGTTCCGGTTCGGGTCGCAGTTCTTTGTGTTGACGAGGAAGCATGCCATCATGGTCGTCAGGGACATGAAGCTATGGAGGAAGTTTAAGCTTCCTTGCCTGATCAAGCGCAGAGACTCGTGCTATCCAGAGGAGCACTACTTCCCGACATTGCTGGATATGCAAGACCCCGAAGGCTGCACCGGGTATACTCTGACAAGGGTGAACCGGACGGATCAAGTCGAGGGCCACCCTCACACATACCGGCCTGGGGAGGTGTCTGCAAGCCTGATCAAGGAGCTGAGGAAATCAAATGGGACATACTCGTACATGTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGGGCCACTGATGGAGATTGCAGACTCTGTCATCCTACGTGACTAATCCAGCAACAACACCACATTTCAGGGTGTCGGAATTTGTACACTGAGGTGAATGAGGTATGGATATGTACTGTTGCTAAGGTGGTGTCAAAAAGATCTAATCTTCTTTTAGGTGTTGTGTTGGAGACAATGTCACTGAATGGAGTGTACATAGTATGAAATGCGGGAATTTTAGGTTGTTCTGTAATTTGTATGCTTAACACTTACGCAATAAAGTGGCATGCTACATCAAAAAAAAAAAAA]


>consensus_8040#1 GTACTATGCCCGAGGTGACGATGTGATGCTCCCGGAGGTGCCGTACGACCAGTTCCGGTT CGGGTCGCAGTTCTTTGTGTTGACGAGGAAGCATGCCATCATGGTCGTCAGGGACATGAA GCTATGGAGGAAGTTTAAGCTTCCTTGCCTGATCAAGCGCAGAGACTCGTGCTATCCAGA GGAGCACTACTTCCCGACATTGCTGGATATGCAAGACCCCGAAGGCTGCACCGGGTATAC TCTGACAAGGGTGAACCGGACGGATCAAGTCGAGGGCCACCCTCACACATACCGGCCTGG GGAGGTGTCTGCAAGCCTGATCAAGGAGCTGAGGAAATCAAATGGGACATACTCGTACAT GTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGGGCCACTGATGGAGATTGCAGACTCTGT CATCCTACGTGACTAATCCAGCAACAACACCACATTTCAGGGTGTCGGAATTTGTACACT GAGGTGAATGAGGTATGGATATGTACTGTTGCTAAGGTGGTGTCAAAAAGATCTAATCTT CTTTTAGGTGTTGTGTTGGAGACAATGTCACTGAATGGAGTGTACATAGTATGAAATGCG GGAATTTTAGGTTGTTCTGTAATTTGTATGCTTAACACTTACGCAATAAAGTGGCATGCT ACATCAAAAAAAAAAAAA



consensusID : consensus_8040#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 488
fasta sequence
                              [ATCAAGGAGGTGAGGAAATCAAATGGGACATATTGGTACATGTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGAGCCACTGATGGAGATTGCAGACTCTGTCATCCTACGTGAATAATCCAGCAACAACACCACATTTCAGGGTGTCGGAATTTGTACACTGAGGTGAATGAGGGTTGTGATGTGATGAACAAGCACAGAGTGTCCATCTATGCCCTTGAAATACTACGTGAGGAACAACATATCCCCTCTGTTTTGTTATTCAGAGATTTTCCAGCAATTGAATGCGCTGCTGGGAGGTGAGGATGGTATGACTACAAATTGTCCCTACGTGAGTATCCTGTATGAATGTGACAATCTGTTGGAAAGTAATAGTAGGGTGTTAGTTAGCATGATCGTCCTATGTATTACATGGTGGCACTGTAAATACATGCAGTGATGGTTTATTATTTTTGTTCCATACATGCCACGGATATTGTTATTAGCGGC]

[-] EMBL AU225924             [ATCAAGGAGGTGAGGAAATCAAATGGGACATATTGGTACATGTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGAGCCACTGATGGAGATTGCAGACTCTGTCATCCTACGTGAATAATCCAGCAACAACACCACATTTCAGGGTGTCGGAATTTGTACACTGAGGTGAATGAGGGTTGTGATGTGATGAACAAGCACAGAGTGTCCATCTATGCCCTTGAAATACTACGTGAGGAACAACATATCCCCTCTGTTTTGTTATTCAGAGATTTTCCAGCAATTGAATGCGCTGCTGGGAGGTGAGGATGGTATGACTACAAATTGTCCCTACGTGAGTATCCTGTATGAATGTGACAATCTGTTGGAAAGTAATAGTAGGGTGTTAGTTAGCATGATCGTCCTATGTATTACATGGTGGCACTGTAAATACATGCAGTGATGGTTTATTATTTTTGTTCCATACATGCCACGGATATTGTTATTAGCGGC]


>consensus_8040#2 ATCAAGGAGGTGAGGAAATCAAATGGGACATATTGGTACATGTTCGCCCGCAAGTTTGCT CCCGAGTGCCTTGAGCCACTGATGGAGATTGCAGACTCTGTCATCCTACGTGAATAATCC AGCAACAACACCACATTTCAGGGTGTCGGAATTTGTACACTGAGGTGAATGAGGGTTGTG ATGTGATGAACAAGCACAGAGTGTCCATCTATGCCCTTGAAATACTACGTGAGGAACAAC ATATCCCCTCTGTTTTGTTATTCAGAGATTTTCCAGCAATTGAATGCGCTGCTGGGAGGT GAGGATGGTATGACTACAAATTGTCCCTACGTGAGTATCCTGTATGAATGTGACAATCTG TTGGAAAGTAATAGTAGGGTGTTAGTTAGCATGATCGTCCTATGTATTACATGGTGGCAC TGTAAATACATGCAGTGATGGTTTATTATTTTTGTTCCATACATGCCACGGATATTGTTA TTAGCGGC



consensusID : consensus_8040#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 431
fasta sequence
                              [TCCTCACTCCCCTCCTCCTCCTCGTCCGCGACCCACCACCCAAAGATCTCGCCCTCCTCTCGAAAATCTCCCACTCTCCTGGCCCTCCGGGGATTCGCGCGCGCGCTGCTTCGCTCGATTTGGTTTCTGGCTGGATTGGATCCGGGGAGGAGGAGTTGCTGTTCGTCCTCCTCCACCAAGAATCACCCACCCGCGAGATCCAATCCAATCCTCTCGCTTGCATTTTCTGCTGCTGCGTGCGCGTGCTGAGATTTCATTCGGATTTGTTGGGGGTTCGCTGAGATCGGAGATGACGTCGCCGGCGACGACGTAACGCCTCGCCGTTCGTGCTGTCGGTGCTCCTCCTCGTCTCCATCCCGGTCATCTTCCTCCTCGCGCCGCGCCTCCTCCCGCCCAAGACGCTTCGGCCATCCCGGGACGCCGACGAGTCC]

[+] EMBL C98638               [TCCTCACTCCCCTCCTCCTCCTCGTCCGCGACCCACCACCCAAAGATCTCGCCCTCCTCTCGAAAATCTCCCACTCTCCTGGCCCTCCGGGGATTCGCGCGCGCGCTGCTTCGCTCGATTTGGTTTCTGGCTGGATTGGATCCGGGGAGGAGGAGTTGCTGTTCGTCCTCCTCCACCAAGAATCACCCACCCGCGAGATCCAATCCAATCCTCTCGCTTGCATTTTCTGCTGCTGCGTGCGCGTGCTGAGATTTCATTCGGATTTGTTGGGGGTTCGCTGAGATCGGAGATGACGTCGCCGGCGACGACGTAACGCCTCGCCGTTCGTGCTGTCGGTGCTCCTCCTCGTCTCCATCCCGGTCATCTTCCTCCTCGCGCCGCGCCTCCTCCCGCCCAAGACGCTTCGGCCATCCCGGGACGCCGACGAGTCC]


>consensus_8040#3 TCCTCACTCCCCTCCTCCTCCTCGTCCGCGACCCACCACCCAAAGATCTCGCCCTCCTCT CGAAAATCTCCCACTCTCCTGGCCCTCCGGGGATTCGCGCGCGCGCTGCTTCGCTCGATT TGGTTTCTGGCTGGATTGGATCCGGGGAGGAGGAGTTGCTGTTCGTCCTCCTCCACCAAG AATCACCCACCCGCGAGATCCAATCCAATCCTCTCGCTTGCATTTTCTGCTGCTGCGTGC GCGTGCTGAGATTTCATTCGGATTTGTTGGGGGTTCGCTGAGATCGGAGATGACGTCGCC GGCGACGACGTAACGCCTCGCCGTTCGTGCTGTCGGTGCTCCTCCTCGTCTCCATCCCGG TCATCTTCCTCCTCGCGCCGCGCCTCCTCCCGCCCAAGACGCTTCGGCCATCCCGGGACG CCGACGAGTCC



consensusID : consensus_8040#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 318
fasta sequence
                              [ATTGCCAGACTCTGTCATCCTACGTGACTAATCCAGCAACAACACCACATTTCCAGGGTGTCGGAATTTGTACACTGAGGTGAATGAGGTATGGATATGTACTGTTGCTAAGGTGGTGTCAAAAAGATCTAATCTTCTTTTAGGTGTTGTGTTGGAGACAATGTCACTGAATGGAGTGTACATAGTATGAAATGCGGGAATTTTAGGTTGTTCTGTAATTTGTATGCTTAACACTTNCGCAATAAAGTGGCATGCTACATCAAGAGTGTTGTTGTGTCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C98639               [ATTGCCAGACTCTGTCATCCTACGTGACTAATCCAGCAACAACACCACATTTCCAGGGTGTCGGAATTTGTACACTGAGGTGAATGAGGTATGGATATGTACTGTTGCTAAGGTGGTGTCAAAAAGATCTAATCTTCTTTTAGGTGTTGTGTTGGAGACAATGTCACTGAATGGAGTGTACATAGTATGAAATGCGGGAATTTTAGGTTGTTCTGTAATTTGTATGCTTAACACTTNCGCAATAAAGTGGCATGCTACATCAAGAGTGTTGTTGTGTCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8040#4 ATTGCCAGACTCTGTCATCCTACGTGACTAATCCAGCAACAACACCACATTTCCAGGGTG TCGGAATTTGTACACTGAGGTGAATGAGGTATGGATATGTACTGTTGCTAAGGTGGTGTC AAAAAGATCTAATCTTCTTTTAGGTGTTGTGTTGGAGACAATGTCACTGAATGGAGTGTA CATAGTATGAAATGCGGGAATTTTAGGTTGTTCTGTAATTTGTATGCTTAACACTTNCGC AATAAAGTGGCATGCTACATCAAGAGTGTTGTTGTGTCATCAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      TTCCTCGAGCACTGTTGGCCTACTGGATCAATCGCTGTCATCTCATCTCCCAACCTTTTT 60
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      TTTCTTACCCTCGCGGAAATCTAATCCTTTTTTTTTTTTCAATTTCGATTTAGTTGCTGT 120
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      TCGTCCTCCTCCACCAAGAATCACCCACCCGCGAGATCCAATCCAATCCTCTCGCTTGCA 180
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      TTTTCTGCTGCTGCGTGCGCGTGCTGAGATTTCATTCGGATTTGTTGGGGGTTCGCTGAG 240
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      ATCGGAGATGACGTCGCCGGCGACGACGTACGCCTCGCCGTTCGTGCTGTCGGTGCTCCT 300
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      CCTCGTCTCCATCCCGGTCATCTTCCTCCTCGCGCCGCGCCTCCTCCCGCCCAAGACGCT 360
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      TCCGGCCATCCCGGACGCCGACGAGTCCGACGACCTCGCGCTCTTCCGCCGCGCCATACT 420
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      CTCCTCCTCCTCCCCCTCCTCCGCCACGCCCACGCCCTCCTCCGCCGCGTCCTACTTCTT 480
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      CCGCCGCCGCCCCGCCCCCAAGGTCGCCTTCCTCTTCCTCACCAACTCCGACCTCGTCTT 540
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      CTCCCCGCTCTGGGAGAAGTTCTTCCGCGGCCACCACCACCTCTTCAACCTCTACGTCCA 600
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      CGCCGACCCTTTCTCCGCCCTCACGATGCCGCCGACGCCCTCGTTCCGCGGCCGATTCGT 660
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      CCCGGCCAAGGCCACGCAGCGCGCCTCCCCCACCCTCATCTCCGCCGCCCGCCGCCTCAT 720
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      CGCCACCGCCCTGCTCGACGACCCATCCAACCAGTTCTTCGCTCTCCTCTCGCAATCCTG 780
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      CATCCCGCTCCACCCGTTCCCCACGCTGTACAACACGCTCCTCTCCGACAATGCCGGGCC 840
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      TCATGGCCGCCACCGCAGCTTCATCGAGATAATGGACGATGCCTACATGATTCATGATAG 900
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      GTACTATGCCCGAGGTGACGATGTGATGCTCCCGGAGGTGCCGTACGACCAGTTCCGGTT 60
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      GTACTATGCCCGAGGCGACGATGTGATGCTCCCGGAGGTGCCGTACGACCAGTTCCGGTT 960
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      CGGGTCGCAGTTCTTTGTGTTGACGAGGAAGCATGCCATCATGGTCGTCAGGGACATGAA 120
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      CGGGTCGCAGTTCTTTGTGTTGACGAGGAAGCATGCCATCATGGTCGTCAGGGACATGAA 1020
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      GCTATGGAGGAAGTTTAAGCTTCCTTGCCTGATCAAGCGCAGAGACTCGTGCTATCCAGA 180
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      GCTATGGAGGAAGTTTAAGCTTCCTTGCCTGATCAAGCGCAGAGACTCGTGCTATCCAGA 1080
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      GGAGCACTACTTCCCGACATTGCTGGATATGCAAGACCCCGAAGGCTGCACCGGGTATAC 240
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      GGAGCACTACTTCCCGACATTGCTGGATATGCAAGACCCCGAAGGCTGCACCGGGTATAC 1140
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      TCTGACAAGGGTGAACCGGACGGATCAAGTCGAGGGCCACCCTCACACATACCGGCCTGG 300
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      TCTGACAAGGGTGAACTGGACGGATCAAGTCGAGGGCCACCCTCACACATACCGGCCTGG 1200
consensus_8040#2      ------------------------------------------------------------
consensus_8040#3      ------------------------------------------------------------
                                                                                  

consensus_8040#1      GGAGGTGTCTGCAAGCCTGATCAAGGAGCTGAGGAAATCAAATGGGACATACTCGTACAT 360
consensus_8040#4      ------------------------------------------------------------
consensus_8040#0      GGAGGTGTCTGCAAGCCTGATCAAGGAGCTGAGGAAATCAAATGGGACATACTCGTACAT 1260
consensus_8040#2      -------------------ATCAAGGAGGTGAGGAAATCAAATGGGACATATTGGTACAT 41
consensus_8040#3      -----------------------------------------TCCTCACTCCCCTCCTCCT 19
                                                                                  

consensus_8040#1      GTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGGGCCACTGATGGAGATTGC-AGACTCTG 419
consensus_8040#4      ----------------------------------------------ATTGCCAGACTCTG 14
consensus_8040#0      GTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGAGCCACTGATGGAGATTGC-AGACTCTG 1319
consensus_8040#2      GTTCGCCCGCAAGTTTGCTCCCGAGTGCCTTGAGCCACTGATGGAGATTGC-AGACTCTG 100
consensus_8040#3      CCTCGTCCGCGACCCACCACCCAAAGATCTCGCCCTCCTCTCGAAAATCTCCCACTCTCC 79
                                                                    **  *         

consensus_8040#1      TCATCCTACGTGACTAATCCAGCAACAACACCACATTTC-AGGGTGTCGGAATTTGTACA 478
consensus_8040#4      TCATCCTACGTGACTAATCCAGCAACAACACCACATTTCCAGGGTGTCGGAATTTGTACA 74
consensus_8040#0      TCATCCTACGTGACTAATCCAGCAACAACACCACATTTC-AGGGTGTCGGAATTTGTACA 1378
consensus_8040#2      TCATCCTACGTGAATAATCCAGCAACAACACCACATTTC-AGGGTGTCGGAATTTGTACA 159
consensus_8040#3      TGGCCCTCCGGGGAT--TCGCGCG----CGCGCTGCTTCGCTCGATTTGGTTTCTG---G 130
                      *   *** ** *  *  **  **     * *     ***    *  * **  * **    

consensus_8040#1      CTGAGGTGAATGAGGT----------ATGGATATGTAC--------------TGTTGCTA 514
consensus_8040#4      CTGAGGTGAATGAGGT----------ATGGATATGTAC--------------TGTTGCTA 110
consensus_8040#0      CTGAGGTGAATGAGGT----------ATGGATATGTAC--------------TGTTGCTA 1414
consensus_8040#2      CTGAGGTGAATGAGGGTTGTGATGTGATGAACAAGCACAGAGTGTCCATCTATGCCCTTG 219
consensus_8040#3      CTGGATTGGATCCGGG---------GAGGAGGAGTTGCTGTTCGTCCTCC--TCCACCAA 179
                      ***   ** **  **           * *   *    *              *       

consensus_8040#1      AGGTGGT--GTCAAAAAGATCTAATCTTCTTTTAGGTGTTGTGTTGGAGACAAT---GTC 569
consensus_8040#4      AGGTGGT--GTCAAAAAGATCTAATCTTCTTTTAGGTGTTGTGTTGGAGACAAT---GTC 165
consensus_8040#0      AGGTGGT--GTCAAAAAGATCTAATCTTCTTTTAGGTGTTGTGTTGGAGACAAT---GTC 1469
consensus_8040#2      AAATACTACGTGAGGAACAACATATCCCCTCTGTTTTGTTAT-TCAGAGATTTTCCAGCA 278
consensus_8040#3      GAATCACCCACCCGCGAGATCCAATCCAATCCTCTCGCTTGCATT-----TTCT---GCT 231
                         *            * * *  ***   *        **   *         *   *  

consensus_8040#1      ACTGAATGGAGTGTACATAGTATGAAATGCGGGAATTTTAGGTTGTTCTGTAATTTGTAT 629
consensus_8040#4      ACTGAATGGAGTGTACATAGTATGAAATGCGGGAATTTTAGGTTGTTCTGTAATTTGTAT 225
consensus_8040#0      ACTGAATGGAGTGTACATAGTATGAAATGCGGGAATTTTAGGTTGTTCTGTAATTTGTAT 1529
consensus_8040#2      ATTGAATGCGCTGCTGGGAGGTGAGGATGGTATGACTACAAATTGTCCCTACGTGAGTAT 338
consensus_8040#3      GCTGCGTGCGC-GTGCTGAGATTTCATTCGGATTTGTTGGGGGTTCGCTGAGATCGGAGA 290
                        **  **    *     **       *        *      *   *     *  *   

consensus_8040#1      GCTTAACACTTACG-CAATAAAGTGGCATGCTACATCAAAAAAAAAAAAA---------- 678
consensus_8040#4      GCTTAACACTTNCG-CAATAAAGTGGCATGCTACATCAAGAGTGTTGTTGTGTCATCAAA 284
consensus_8040#0      GCTTAACACTTACG-CAATAAAGTGGCATGCTACATCAAGAGTGTTGTTGTGTCAAAAAA 1588
consensus_8040#2      CCTGTATGAATGTGACAATCTGTTGGAAAGTAATAGTAGGGTGTTAGTTAGCATGATCGT 398
consensus_8040#3      TGACGTCGCCGGCGACGACGTAACGCCTCGCCGT-TCGTGCTGTCGGTGCTCCTCCTCGT 349
                                   * * *      *    *                              

consensus_8040#1      ------------------------------------------------------------
consensus_8040#4      A-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------------- 318
consensus_8040#0      A-AAAAAAAAAAAAAAAAAAAGGCCACAT------------------------------- 1616
consensus_8040#2      C-CTATGTATTACATGGTGGCACTGTAAATACATGCAGTGATGGTTTATTATTTTTGTTC 457
consensus_8040#3      CTCCATCCCGGTCATCTTCCTCCTCGCGCCGCGCCTCCTCCCGCCCAAGACGCTTCGGCC 409
                                                                                  

consensus_8040#1      -------------------------------
consensus_8040#4      -------------------------------
consensus_8040#0      -------------------------------
consensus_8040#2      CATACATGCCACGGATATTGTTATTAGCGGC 488
consensus_8040#3      ATCCCGGGACGCCGACGAGTCC--------- 431
                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)