cluster # 8043

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Oryza sativa
cluster # 8043 cluster # 8043 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8043#0 length = 1594 sequences # 5
consensusID : consensus_8043#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1594
fasta sequence
                              [AGCCAAACACACACGACCTTTGTTATCGGCATCGCCGTCGCGGCAGTGAAGAAGGGAGATGAGGAGGTTTAGGGTTTGGCCTCCATCTCCATCGCCATGGCCGCTGCTCGCTTCCCGCCCTTGCCCTCACTCCCACCACCATCGCAGTCCCTTCCACGCCTCCGCCAACTCCGGCGCCCGCCAAGGCAATTTTATTCTACCTGGTGCAACGGCAGCAACTCTTGTCATGTTTGGTATTCTACATGCTAGGCGTATGTACGAAGACCAAAAAGTTGTTGAAAGGAAGGAGAAAGGAATTGAGCCGGAATTCTCACCAGATTTCAAGGCTTCATTTCTCAGGCTTCTGCCATTGCGTTCGATGTCACGTTTATGGGGATCCTTGATGGAAGTGGAACTTCCAGTGTTCATGCGCCCTGCCATCTATAAAGCATGGGCTAGAGCCTTCCACTCCAATTTGCAAGAAGCTGCTATGCCACTAGAAGAATACCCTTCTTTACAGGCATTCTTCATCCGTAGTCTCAAAGAAGGTTCAAGGCCCATTGATGCAGACCCAAACTGTCTGGTGAGTCCTGTGGATGGTAAAGTTCTGCGGCTTGGAGAACTTAGAGGTCCAGGAACCATGATTGAGCAAGTGAAGGGCTTTTCTTATTCTGCTGCTTCTCTTCTCGGTGCAAGTTCATCTCTTCATGGTGCTGAAGAAGAAGATTTTTCTAGAGAGCATACAGAACAAAGTAATCCCGCAGATTCAAATGCAAAATCATGGTGGCGAGTATCAGTGGCTAAACCCAAATTATGGGATCAAACTCTGCTGAGCCCAAAGAAAGGCATCTTCTATTGTGTCATTTATTTACACCCTGGTGATTATCATCGAGTTCACTCTCCTGTTGATTGGAACATTATAAAGCGCCGACATTTCTCAGGTCATCTCTTCCCCCAAAATGAACGTGCCGTGCGGACCATCAGAAACTTGTATGTTGAGAATGAAAGGGTAGTACTTGAAGGGCAGTGGAAGGAAGGCTTTGTTGCAATTGCAGCCATTGGTGCTACTAATGTTGGCTCTATCAAACTATATATTGAACCAGAGCTAAGGACAAATAGGGCAGGGTCGAAGATACTGAACTCCCAGCCTGAGCCTCCTGATGATCGAGTTTATGAACCTGTAGGCACCGGTGTGATGGTTAAAAAGGGGGAAGAGATAGCAGGGTTTAAGATGGGATCGACGGTGGTGATGGTATTTGAGGCACCTGTAGTGTCCAAGGCAAGATGGAGAGAGGATGGCAGTGGCACGGTAACGTCAGATTTCGATTTCTGTATCAAGGCTGGCGATAGGATCAGGGTAGGAGAAGCCATTGGGCGATGGACATCGCGGGAATGAATGAATGAAGGCATGGCATGGCATCTCTCTCTATATATCTTGTGTTAACATGATGGATGATGAGTATCGTCGTCGTATCAATGTCTCTTTCGTTTTTATTTTTGAGCTGCGGTGCCGGTGCATGCTACTACAAAAAGACTTGTATCTTCTGTAGGGAAGTAAAGGAAACTATTGCCATTTTGACTTGACTTGGGCGATTTGAGAGAGAATGATATTCTT]

[+] EMBL AK072180             [AGCCAAACACACACGACCTTTGTTATCGGCATCGCCGTCGCGGCAGTGAAGAAGGGAGATGAGGAGGTTTAGGGTTTGGCCTCCATCTCCATCGCCATGGCCGCTGCTCGCTTCCCGCCCTTGCCCTCACTCCCACCACCATCGCAGTCCCTTCCACGCCTCCGCCAACTCCGGCGCCCGCCAAGGCAATTTTATTCTACCTGGTGCAACGGCAGCAACTCTTGTCATGTTTGGTATTCTACATGCTAGGCGTATGTACGAAGACCAAAAAGTTGTTGAAAGGAAGGAGAAAGGAATTGAGCCGGAATTCTCACCAGATTTCAAGGCTTCATTTCTCAGGCTTCTGCCATTGCGTTCGATGTCACGTTTATGGGGATCCTTGATGGAAGTGGAACTTCCAGTGTTCATGCGCCCTGCCATCTATAAAGCATGGGCTAGAGCCTTCCACTCCAATTTGCAAGAAGCTGCTATGCCACTAGAAGAATACCCTTCTTTACAGGCATTCTTCATCCGTAGTCTCAAAGAAGGTTCAAGGCCCATTGATGCAGACCCAAACTGTCTGGTGAGTCCTGTGGATGGTAAAGTTCTGCGGCTTGGAGAACTTAGAGGTCCAGGAACCATGATTGAGCAAGTGAAGGGCTTTTCTTATTCTGCTGCTTCTCTTCTCGGTGCAAGTTCATCTCTTCATGGTGCTGAAGAAGAAGATTTTTCTAGAGAGCATACAGAACAAAGTAATCCCGCAGATTCAAATGCAAAATCATGGTGGCGAGTATCAGTGGCTAAACCCAAATTATGGGATCAAACTCTGCTGAGCCCAAAGAAAGGCATCTTCTATTGTGTCATTTATTTACACCCTGGTGATTATCATCGAGTTCACTCTCCTGTTGATTGGAACATTATAAAGCGCCGACATTTCTCAGGTCATCTCTTCCCCCAAAATGAACGTGCCGTGCGGACCATCAGAAACTTGTATGTTGAGAATGAAAGGGTAGTACTTGAAGGGCAGTGGAAGGAAGGCTTTGTTGCAATTGCAGCCATTGGTGCTACTAATGTTGGCTCTATCAAACTATATATTGAACCAGAGCTAAGGACAAATAGGGCAGGGTCGAAGATACTGAACTCCCAGCCTGAGCCTCCTGATGATCGAGTTTATGAACCTGTAGGCACCGGTGTGATGGTTAAAAAGGGGGAAGAGATAGCAGGGTTTAAGATGGGATCGACGGTGGTGATGGTATTTGAGGCACCTGTAGTGTCCAAGGCAAGATGGAGAGAGGATGGCAGTGGCACGGTAACGTCAGATTTCGATTTCTGTATCAAGGCTGGCGATAGGATCAGGGTAGGAGAAGCCATTGGGCGATGGACATCGCGGGAATGAATGAATGAAGGCATGGCATGGCATCTCTCTCTATATATCTTGTGTTAACATGATGGATGATGAGTATCGTCGTCGTATCAATGTCTCTTTCGTTTTTATTTTTGAGCTGCGGTGCCGGTGCATGCTACTACAAAAAGACTTGTATCTTCTGTAGGGAAGTAAAGGAAACTATTGCCA                                          ]
[+] EMBL CB643931             [                     GTTATCCTTATCGCCGTCGCGGCAGTGAAGAAGGGAGATGAGGAGGTTTAGGGTTTGGCCTCCATCTCCATCGCCATGGCCGCTGCTCGCTTCCCGCCCTTGCCCTCACTCCCACCACCATCGCAGTCCCTTCCACGCCTCCGCCAACTCCGGCGCCCGCCAAGGCAATTTTATTCTACCTGGTGCAACGGCAGCAACTCTTGTCATGTTTGGTATTCTACATGCTAGGCGTATGTACGAAGACCAAAAAGTTGTTGAAAGGAAGGAGAAAGGAATTGAGCCGGAATTCTCACCAGATTTCAAGGCTTCATTTCTCAGGCTTCTGCCATTGCGTTCGATGTCACGTTTATGGGGATCCTTGATGGAAGTGGAACTTCCAGTGTTCATGCGCCCTGCCATCTATAAAGCATGGGCTAGAGCCTTCCACTCCAATTTGCAAGAAGCTGCTATGCCACTAGAAGAATACCCTTCTTTACAGGCATTCTTCATCCGTAGTCTCAAAGAAGGTTCAAGGCCCATTGATGCAGACCCAAACTGTCTGGTGAGTCCTGTGGATGGTAAAGTTCTGCGGCTTGGAGAACTTAGAGGTCCAGGAACCATGATTGAGCAAGTGAAGGGCTTTTCTTATTCTGCTGCTTCTCTTCTCGGTGCAAGTTCATCTCTTCATGGTGCTGAAGAAGAAGATTTTTCTAGAGAGCATACAGAACAAAGTAATCCCGCAGATTCAAATGCAAAATCATGGTGGCGAGTATCAGTGGCTAAACCCAAATTATGGGATCAAACTCTGCTGAGCCCAAAGAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB641911             [                     GTTATCGGCATCGCCGTCGCGGCAGTGAAGAAGGGAGATGAGGAGGTTTAGGGTTTGGCCTCCATCTCCATCGCCATGGCCGCTGCTCGCTTCCCGCCCTTGCCCTCACTCCCACCACCATCGCAGTCCCTTCCACGCCTCCGCCAACTCCGGCGCCCGCCAAGGCAATTTTATTCTACCTGGCGCAACGGCAGCAACTCTTGTCATGTTTGGTATTCTACATGCTAGGCGTATGTACGAAGACCAAAAAGTTGTTGAAAGGAAGGAGAAAGGAATTGAGCCGGAATTCTCACCAGATTTCAAGGCTTCATTTCTCAGGCTTCTGCCATTGCGTTCGATGTCACGTTTATGGGGATCCTTGATGGAAGGGGAACTTCCAGTGTTCATGCGCCCTGCCATCTATAAAGCATGGGCTAGAGCCTTCCACTCCAATTTGCAAGAAGCTGCTATGCCACTAGAAGAATACCCTTCTTTACAGGCATTCTTCATCCGTAGTCTCAAAGAAGGTTCAAGGCCCATTGATGCAGACCCAAACTGTCTGGTGAGTCCTGTGGATGGTAAAGTTCTGCGGCTTGGAGAACTTAGAGGTCCAGGAACCATGATTGAGCAAGTGAAGGGCTTTTCTTATTCTGCTGCTTCTCTTCTCGGTGCAAGTTCATCTCTTCATGGTGCTGAACAAGAAGATGTTTCTAGAGAGCATACAGAACAAAGTAATCCCGCAGATTCAAATGCAAAATCATGGTGGCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK098927             [                                                                AGGTTTAGGGTTTGGCCTCCATCTCCATCGCCATGGCCGCTGCTCGCTTCCCGCCCTTGCCCTCACTCCCACCACCATCGCAGTCCCTTCCACGCCTCCGCCAACTCCGGCGCCCGCCAAGGCAATTTTATTCTACCTGGTGCAACGGCAGCAACTCTTGTCATGTTTGGTATTCTACATGCTAGGCGTATGTACGAAGACCAAAAAGTTGTTGAAAGGAAGGAGAAAGGAATTGAGCCGGAATTCTCACCAGATTTCAAGGCTTCATTTCTCAGGCTTCTGCCATTGCGTTCGATGTCACGTTTATGGGGATCCTTGATGGAAGTGGAACTTCCAGTGTTCATGCGCCCTGCCATCTATAAAGCATGGGCTAGAGCCTTCCACTCCAATTTGCAAGAAGCTGCTATGCCACTAGAAGAATACCCTTCTTTACAGGCATTCTTCATCCGTAGTCTCAAAGAAGGTTCAAGGCCCATTGATGCAGACCCAAACTGTCTGGTGAGTCCTGTGGATGGTAAAGTTCTGCGGCTTGGAGAACTTAGAGGTCCAGGAACCATGATTGAGCAAGTGAGGGGCTTTTCTTATTCTGCTGCTTCTCTTCTCGGTGCAAGTTCATCTCTTCATGGTGCTGAAGAAGAAGATTTTTCTAGAGAGCATACAGAACAAAGTAATCCCGCAGATTCAAATGCAAAATCATGGTGGCGAGTATCAGTGGCTAAACCCAAATTATGGGATCAAACTCTGCTGAGCCCAAAGAAAGGCATCTTCTATTGTGTCATTTATTTACACCCTGGTGATTATCATCGAGTTCACTCTCCTGTTGATTGGAACATTATAAAGCGCCGACATTTCTCAGGTCATCTCTTCCCCCAAAATGAACGTGCCGTGCGGACCATCAGAAACTTGTATGTTGAGAATGAAAGGGTAGTACTTGAAGGGCAGTGGAAGGAAGGCTTTGTTGCAATTGCAGCCATTGGTGCTACTAATGTTGGCTCTATCAAACTATATATTGAACCAGAGCTAAGGACAAATAGGGCAGGGTCGAAGATACTGAACTCCCAGCCTGAGCCTCCTGATGATCGAGTTTATGAACCTGTAGGCACCGGTGTGATGGTTAAAAAGGGGGAAGAGATAGCAGGGTTTAAGATGGGATCGACGGTGGTGATGGTATTTGAGGCACCTGTAGTGTCCAAGGCAAGATGGAGAGAGGATGGCAGTGGCACGGTAACGTCAGATTTCGATTTCTGTATCAAGGCTGGCGATAGGATCAGGGTAGGAGAAGCCATTGGGCGATGGACATCGCGGGAATGAATGAATGAAGGCATGGCATGGCATCTCTCTCTATATATCTTGTGTTAACATGATGGATGATGAGTATCGTCGTCGTATCAATGTCTCTTTCGTTTTTATTTTTGAGCTGCGGTGCCGGTGCATGCTACTACAAAAAGACTTGTATCTTCTGTAGGGAAGTAAAGGAAACTATTGCCATTTTGACTTGACTTGGGCGATTTGAGAGAGAATGATATTCTT]
[-] EMBL CB641912             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAAACTCTGCTGAGCCCAAAGAAAGGCATCTTCTATTGTGTCATTTATTTACACCCTGGTGATTATCATCGAGTTCACTCTCCTGTTGATTGGAACATTATAAAGCGCCGACATTTCTCAGGTCATCTCTTCCCCCAAAATGAACGTGCCGTGCGGACCATCAGAAACTTGTATGTTGAGAATGAAAGGGTAGTACTTGAAGGGCAGTGGAAGGAAGGCTTTGTCGCAATTCCAGCCATTGGTGCTACTAATGTTGGCTCTATCAAACTATATATTGAACCAGAGCTAAGGCCAAATAGGGCAGGGTCGAAGATACTGAACTCCCACCCTGAGCCTCCTGATGATCGAGTTTATGAACCTGTAGGCCCCGGTGTGATGGTTAAAAAGGGGGAAGAGATAGCAGGGTTTAAGATGGGATCGACGGTGGTGATGGTATTTGAGGCACCTGTAGTGTCCAAGGCAAGATGGAGAGAGGATGGCAGTGGCACGGTAACGTCAGATTTCGATTTCTGTATCAAGGCTGGCGATAGGATCAGGGTAGGAGAAGCCATTGGGCGATGGACATCGCGGGAATGAATGAATGAAGGCATGGCATGGCATCTCTCTCTATATATCTTGTGTTAACATGATGGATGATGAGTATCGTCGTCGTATCAATGTCTCTTTCGTTTTTATTTTTGAGCTGCGGTGCCGGTGCATGCTACTACAAAAAGACTTGTATCTTCTGTAGGGAAGTAAAGGAAACTATTCCCAT                                         ]




>consensus_8043#0
AGCCAAACACACACGACCTTTGTTATCGGCATCGCCGTCGCGGCAGTGAAGAAGGGAGAT
GAGGAGGTTTAGGGTTTGGCCTCCATCTCCATCGCCATGGCCGCTGCTCGCTTCCCGCCC
TTGCCCTCACTCCCACCACCATCGCAGTCCCTTCCACGCCTCCGCCAACTCCGGCGCCCG
CCAAGGCAATTTTATTCTACCTGGTGCAACGGCAGCAACTCTTGTCATGTTTGGTATTCT
ACATGCTAGGCGTATGTACGAAGACCAAAAAGTTGTTGAAAGGAAGGAGAAAGGAATTGA
GCCGGAATTCTCACCAGATTTCAAGGCTTCATTTCTCAGGCTTCTGCCATTGCGTTCGAT
GTCACGTTTATGGGGATCCTTGATGGAAGTGGAACTTCCAGTGTTCATGCGCCCTGCCAT
CTATAAAGCATGGGCTAGAGCCTTCCACTCCAATTTGCAAGAAGCTGCTATGCCACTAGA
AGAATACCCTTCTTTACAGGCATTCTTCATCCGTAGTCTCAAAGAAGGTTCAAGGCCCAT
TGATGCAGACCCAAACTGTCTGGTGAGTCCTGTGGATGGTAAAGTTCTGCGGCTTGGAGA
ACTTAGAGGTCCAGGAACCATGATTGAGCAAGTGAAGGGCTTTTCTTATTCTGCTGCTTC
TCTTCTCGGTGCAAGTTCATCTCTTCATGGTGCTGAAGAAGAAGATTTTTCTAGAGAGCA
TACAGAACAAAGTAATCCCGCAGATTCAAATGCAAAATCATGGTGGCGAGTATCAGTGGC
TAAACCCAAATTATGGGATCAAACTCTGCTGAGCCCAAAGAAAGGCATCTTCTATTGTGT
CATTTATTTACACCCTGGTGATTATCATCGAGTTCACTCTCCTGTTGATTGGAACATTAT
AAAGCGCCGACATTTCTCAGGTCATCTCTTCCCCCAAAATGAACGTGCCGTGCGGACCAT
CAGAAACTTGTATGTTGAGAATGAAAGGGTAGTACTTGAAGGGCAGTGGAAGGAAGGCTT
TGTTGCAATTGCAGCCATTGGTGCTACTAATGTTGGCTCTATCAAACTATATATTGAACC
AGAGCTAAGGACAAATAGGGCAGGGTCGAAGATACTGAACTCCCAGCCTGAGCCTCCTGA
TGATCGAGTTTATGAACCTGTAGGCACCGGTGTGATGGTTAAAAAGGGGGAAGAGATAGC
AGGGTTTAAGATGGGATCGACGGTGGTGATGGTATTTGAGGCACCTGTAGTGTCCAAGGC
AAGATGGAGAGAGGATGGCAGTGGCACGGTAACGTCAGATTTCGATTTCTGTATCAAGGC
TGGCGATAGGATCAGGGTAGGAGAAGCCATTGGGCGATGGACATCGCGGGAATGAATGAA
TGAAGGCATGGCATGGCATCTCTCTCTATATATCTTGTGTTAACATGATGGATGATGAGT
ATCGTCGTCGTATCAATGTCTCTTTCGTTTTTATTTTTGAGCTGCGGTGCCGGTGCATGC
TACTACAAAAAGACTTGTATCTTCTGTAGGGAAGTAAAGGAAACTATTGCCATTTTGACT
TGACTTGGGCGATTTGAGAGAGAATGATATTCTT
clustalw multiple alignements is not computed in this case