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Oryza sativa
cluster # 8047 cluster # 8047       Sequences # 5       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8047#0 length = 3124 sequences # 1  
consensus_8047#1 length = 1571 sequences # 1  
consensus_8047#2 length = 609 sequences # 1  
consensus_8047#3 length = 417 sequences # 1  
consensus_8047#4 length = 415 sequences # 1  

consensusID : consensus_8047#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3124
fasta sequence
                              [GAGATCTGGAAGGCGGCCATGGCGCGCCTCGCGCTCCTCGCCGTCCCCGTCGCGCTCCTCCTCTCCCTCTCCTTCCTCCTCCTGCGCCCCGCCTCCCCGCCGCTCCCCTTCTCGCGGCAGCAAGCGGCGTCCGGCCCCGACCGCCGCCGCCTCCTCAGGGTCTACGTTGCGGAGCTCCCCCGCGCGCTCAACCACGGCCTCCTCGACCTCTACTGGTCGCTCCCCGCCGCCGACTCCCGCATCCCGGCCTCCTCCGACCCCGACCACCCGCCGCCGCGGCCTCCGCGCGCGCACTCGCCGTACCCGGATAGCCCACTGATTAAGCAGTACAGCGCCGAGTACTGGCTCCTCGCCTCCCTCCAGCCGGGCTCGTCGTCCGCGCCCGCCGTCGGGGTGGTCGCGGACTGGAGGGACGCGGATGTGGTGTTCGTCCCCTTCTTCGCGACGCTGTCCGCGGAGATGGAGCTCGGGTGGGGCGCCAAGGGCGCGTTCCGCAGGAAGGAGGGGAACGAGGACTACCGCCGCCAGCGGGAGGTCGTCGACCGCGTCACCGCCCACCCAGCGTGGCGGCGCTCCGGTGGCCGTGACCACGTCTTCGTCTTGACAGGTTTTGTTAAATATTGAGGCATTCTTTGACAGACCCTGTGGCGATGTGGCATGTCCGTAAAGAGATTGCTCCTGCAATTCTTTTGGTGGTTGATTTTGGCGGATGGTACAAACTTGATTCAAACTCTGCAAGCAGCAATGTTTCTCATATGATACAGCATACGCAAGTGTCATTGCTCAAAGATGTCATTGTACCTTACACTCATTTGCTCCCTACAATGCACTTATCAGAGAATAAGGACCGCCCCACTCTTCTGTACTTCAAGGGAGCCAAACACAGGCATCGGGGTGGTTTGGTACGGGAGAAACTATGGGACTTGATGGTTAATGAGCCTGATGTTGTCATGGAAGAAGGTTATCCTAATGCCACAGGACGTGAACAATCAATAAAAGGGATGCGGACATCAGAGTTTTGCTTGCACCCAGCTGGTGACACCCCAACTTCATGTCGTCTCTTTGATGCTGTTGCTAGTCTGTGCATACCTGTCATTGTCAGCGATGAGATTGAGCTGCCCTTTGAAGGGATGATAGATTACACAGAATTCGCCATTTTTGTCTCAGTCAATAATTCTATGAGACCAAAATGGCTCACAAACTACTTAAGAAATGTCCCCAGGCAGCAGAAAGATGAATTCCGAAGAAACATGGCTCACGTCCAGCCTATATTTGAGTATGATAGTATTTACCCAGGTAGGATGGCCTCTGCTGCACAAGATGGTGCTGTGAACCACATCTGGAAAAAGATTCACCAGAAGTTGCCGATGATTCAAGAAGCGGTTACCCGAGAGAAGCGAAAACCTGATGGAACATCGATCCCTCTTCGGTGCCATTGTACATGACTCGCGAGACATGATTGTTAGTATTAGCAATCAATCCCCCATGGGAGGAGTTAGTTAGCATTCCCTGCCAATTTATGGATTGTTTGTAGTGCAAATATGAGAGAAATTTCAACAGTAGGTTTATGCTCTTGTTGTCAATTGTATTTCGTCTGGAGTGATTCCCCGCATTGCTCCATGTGTGAGGTTTGTTGGTTCACTGCCATGAGAATTCATATATGAATCTGCCCATTCGGCAGACAATTTTCCATATTACTCAGAGAGAAGCTTGAGACAGTACGTAGTCCCTTATATTTGTTGCTTCTAAATGATTTGGCTAGCGTTCACCCAAAATGCATGCATGATCATGAGCAAAATACCTTTTGATTCAACAGAAAGAGATCCAATCTATGATGTTTGGCAGTACCAAATTCAGGACATGAAAAGCAAAAGGGAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAACAGATAGGCTGCCAACATGGTGGCCAAAGGAACGGAGATATTGTCATCCACAACATCATTGACAGGAATACACTCCACTACAGTAGCTGCTAATGCAACAAGAGCCAGTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAGAACAGCATCCTGTGATGCAAAAGATCCATGAGTTAACAATAACAAGGAGTAACAATGCAAAAGAACCAGCAATGCATTCTGAAGCAAAAACCTACAGTGCAGATAGAAGGAAGCCAGAAATGAACATTGAGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCGGAGCCATACCTTCTCCCAACAATGTCAGCAAAGCCTGAAAAAATAAGAACCAAGAAGGTGGATATACTTAGCAGAAGCATTCATTTCATCAAGTGAACTGGGGTATTACAAAAAAAAACTGCAGATTTTCCTAAATTCCCAGGAGATCCAACATCTTACCATCACCACCACTCATCATCGACAACGAAACAATCCCAATAGGAGACTGGCGCCAGAAGACCAAAACACTGACCAGCAGCACAATGACATAGTACAGAGGACCTCTCAGCAATTCCCTGTAAGCAACCAAAGATCATGTCAAGGAATACTATTTTGATTTTTGAATGAAGGAGTATCAGAAATAAGGATCATAGCACGAACTCTGGTTTTCCTTCACGGGTCACCGATTTTACTAGAGCTTCATCAGTGGAAAGGCGGAGCCCGTAGGTCAGAAGCCTTATGCAGTTCAGCAACGGGACAATTGCCGCGAAGAACCGTGCTTCTGTCGAATTACTGCGAAAGGGGCATGATTTTCTTAAGATCTCTAGTCTGATTTGGTTGTAGAAAACATTTCGATGCTGGAAGAAGCAGTGGCAAGGGAGACCTGAATAGTGGCCAGGAAGACATGAACAGGACTCCGGAGAGCACATGCACAATTTTTCTGCTCAGGTTCTGAGATTAATTATGAAAAGAATCAGAAGTTAACAAGATATAATTAAGAAAGTAGCAGTCCATCTGAACCAGTCAGATCTTCCCAGCAATTGAAAATAAATTCAAGATACAGATCACATCCACTGAATTGTATATACCATATTTTACTCTCCGGATAACAGTCAACAGAGCTAAAGAATTGATATTTTTTGAAGAATGGCGGAGATCAAAGCTTCA]

[+] EMBL AK065924             [GAGATCTGGAAGGCGGCCATGGCGCGCCTCGCGCTCCTCGCCGTCCCCGTCGCGCTCCTCCTCTCCCTCTCCTTCCTCCTCCTGCGCCCCGCCTCCCCGCCGCTCCCCTTCTCGCGGCAGCAAGCGGCGTCCGGCCCCGACCGCCGCCGCCTCCTCAGGGTCTACGTTGCGGAGCTCCCCCGCGCGCTCAACCACGGCCTCCTCGACCTCTACTGGTCGCTCCCCGCCGCCGACTCCCGCATCCCGGCCTCCTCCGACCCCGACCACCCGCCGCCGCGGCCTCCGCGCGCGCACTCGCCGTACCCGGATAGCCCACTGATTAAGCAGTACAGCGCCGAGTACTGGCTCCTCGCCTCCCTCCAGCCGGGCTCGTCGTCCGCGCCCGCCGTCGGGGTGGTCGCGGACTGGAGGGACGCGGATGTGGTGTTCGTCCCCTTCTTCGCGACGCTGTCCGCGGAGATGGAGCTCGGGTGGGGCGCCAAGGGCGCGTTCCGCAGGAAGGAGGGGAACGAGGACTACCGCCGCCAGCGGGAGGTCGTCGACCGCGTCACCGCCCACCCAGCGTGGCGGCGCTCCGGTGGCCGTGACCACGTCTTCGTCTTGACAGGTTTTGTTAAATATTGAGGCATTCTTTGACAGACCCTGTGGCGATGTGGCATGTCCGTAAAGAGATTGCTCCTGCAATTCTTTTGGTGGTTGATTTTGGCGGATGGTACAAACTTGATTCAAACTCTGCAAGCAGCAATGTTTCTCATATGATACAGCATACGCAAGTGTCATTGCTCAAAGATGTCATTGTACCTTACACTCATTTGCTCCCTACAATGCACTTATCAGAGAATAAGGACCGCCCCACTCTTCTGTACTTCAAGGGAGCCAAACACAGGCATCGGGGTGGTTTGGTACGGGAGAAACTATGGGACTTGATGGTTAATGAGCCTGATGTTGTCATGGAAGAAGGTTATCCTAATGCCACAGGACGTGAACAATCAATAAAAGGGATGCGGACATCAGAGTTTTGCTTGCACCCAGCTGGTGACACCCCAACTTCATGTCGTCTCTTTGATGCTGTTGCTAGTCTGTGCATACCTGTCATTGTCAGCGATGAGATTGAGCTGCCCTTTGAAGGGATGATAGATTACACAGAATTCGCCATTTTTGTCTCAGTCAATAATTCTATGAGACCAAAATGGCTCACAAACTACTTAAGAAATGTCCCCAGGCAGCAGAAAGATGAATTCCGAAGAAACATGGCTCACGTCCAGCCTATATTTGAGTATGATAGTATTTACCCAGGTAGGATGGCCTCTGCTGCACAAGATGGTGCTGTGAACCACATCTGGAAAAAGATTCACCAGAAGTTGCCGATGATTCAAGAAGCGGTTACCCGAGAGAAGCGAAAACCTGATGGAACATCGATCCCTCTTCGGTGCCATTGTACATGACTCGCGAGACATGATTGTTAGTATTAGCAATCAATCCCCCATGGGAGGAGTTAGTTAGCATTCCCTGCCAATTTATGGATTGTTTGTAGTGCAAATATGAGAGAAATTTCAACAGTAGGTTTATGCTCTTGTTGTCAATTGTATTTCGTCTGGAGTGATTCCCCGCATTGCTCCATGTGTGAGGTTTGTTGGTTCACTGCCATGAGAATTCATATATGAATCTGCCCATTCGGCAGACAATTTTCCATATTACTCAGAGAGAAGCTTGAGACAGTACGTAGTCCCTTATATTTGTTGCTTCTAAATGATTTGGCTAGCGTTCACCCAAAATGCATGCATGATCATGAGCAAAATACCTTTTGATTCAACAGAAAGAGATCCAATCTATGATGTTTGGCAGTACCAAATTCAGGACATGAAAAGCAAAAGGGAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAACAGATAGGCTGCCAACATGGTGGCCAAAGGAACGGAGATATTGTCATCCACAACATCATTGACAGGAATACACTCCACTACAGTAGCTGCTAATGCAACAAGAGCCAGTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAGAACAGCATCCTGTGATGCAAAAGATCCATGAGTTAACAATAACAAGGAGTAACAATGCAAAAGAACCAGCAATGCATTCTGAAGCAAAAACCTACAGTGCAGATAGAAGGAAGCCAGAAATGAACATTGAGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCGGAGCCATACCTTCTCCCAACAATGTCAGCAAAGCCTGAAAAAATAAGAACCAAGAAGGTGGATATACTTAGCAGAAGCATTCATTTCATCAAGTGAACTGGGGTATTACAAAAAAAAACTGCAGATTTTCCTAAATTCCCAGGAGATCCAACATCTTACCATCACCACCACTCATCATCGACAACGAAACAATCCCAATAGGAGACTGGCGCCAGAAGACCAAAACACTGACCAGCAGCACAATGACATAGTACAGAGGACCTCTCAGCAATTCCCTGTAAGCAACCAAAGATCATGTCAAGGAATACTATTTTGATTTTTGAATGAAGGAGTATCAGAAATAAGGATCATAGCACGAACTCTGGTTTTCCTTCACGGGTCACCGATTTTACTAGAGCTTCATCAGTGGAAAGGCGGAGCCCGTAGGTCAGAAGCCTTATGCAGTTCAGCAACGGGACAATTGCCGCGAAGAACCGTGCTTCTGTCGAATTACTGCGAAAGGGGCATGATTTTCTTAAGATCTCTAGTCTGATTTGGTTGTAGAAAACATTTCGATGCTGGAAGAAGCAGTGGCAAGGGAGACCTGAATAGTGGCCAGGAAGACATGAACAGGACTCCGGAGAGCACATGCACAATTTTTCTGCTCAGGTTCTGAGATTAATTATGAAAAGAATCAGAAGTTAACAAGATATAATTAAGAAAGTAGCAGTCCATCTGAACCAGTCAGATCTTCCCAGCAATTGAAAATAAATTCAAGATACAGATCACATCCACTGAATTGTATATACCATATTTTACTCTCCGGATAACAGTCAACAGAGCTAAAGAATTGATATTTTTTGAAGAATGGCGGAGATCAAAGCTTCA]


>consensus_8047#0 GAGATCTGGAAGGCGGCCATGGCGCGCCTCGCGCTCCTCGCCGTCCCCGTCGCGCTCCTC CTCTCCCTCTCCTTCCTCCTCCTGCGCCCCGCCTCCCCGCCGCTCCCCTTCTCGCGGCAG CAAGCGGCGTCCGGCCCCGACCGCCGCCGCCTCCTCAGGGTCTACGTTGCGGAGCTCCCC CGCGCGCTCAACCACGGCCTCCTCGACCTCTACTGGTCGCTCCCCGCCGCCGACTCCCGC ATCCCGGCCTCCTCCGACCCCGACCACCCGCCGCCGCGGCCTCCGCGCGCGCACTCGCCG TACCCGGATAGCCCACTGATTAAGCAGTACAGCGCCGAGTACTGGCTCCTCGCCTCCCTC CAGCCGGGCTCGTCGTCCGCGCCCGCCGTCGGGGTGGTCGCGGACTGGAGGGACGCGGAT GTGGTGTTCGTCCCCTTCTTCGCGACGCTGTCCGCGGAGATGGAGCTCGGGTGGGGCGCC AAGGGCGCGTTCCGCAGGAAGGAGGGGAACGAGGACTACCGCCGCCAGCGGGAGGTCGTC GACCGCGTCACCGCCCACCCAGCGTGGCGGCGCTCCGGTGGCCGTGACCACGTCTTCGTC TTGACAGGTTTTGTTAAATATTGAGGCATTCTTTGACAGACCCTGTGGCGATGTGGCATG TCCGTAAAGAGATTGCTCCTGCAATTCTTTTGGTGGTTGATTTTGGCGGATGGTACAAAC TTGATTCAAACTCTGCAAGCAGCAATGTTTCTCATATGATACAGCATACGCAAGTGTCAT TGCTCAAAGATGTCATTGTACCTTACACTCATTTGCTCCCTACAATGCACTTATCAGAGA ATAAGGACCGCCCCACTCTTCTGTACTTCAAGGGAGCCAAACACAGGCATCGGGGTGGTT TGGTACGGGAGAAACTATGGGACTTGATGGTTAATGAGCCTGATGTTGTCATGGAAGAAG GTTATCCTAATGCCACAGGACGTGAACAATCAATAAAAGGGATGCGGACATCAGAGTTTT GCTTGCACCCAGCTGGTGACACCCCAACTTCATGTCGTCTCTTTGATGCTGTTGCTAGTC TGTGCATACCTGTCATTGTCAGCGATGAGATTGAGCTGCCCTTTGAAGGGATGATAGATT ACACAGAATTCGCCATTTTTGTCTCAGTCAATAATTCTATGAGACCAAAATGGCTCACAA ACTACTTAAGAAATGTCCCCAGGCAGCAGAAAGATGAATTCCGAAGAAACATGGCTCACG TCCAGCCTATATTTGAGTATGATAGTATTTACCCAGGTAGGATGGCCTCTGCTGCACAAG ATGGTGCTGTGAACCACATCTGGAAAAAGATTCACCAGAAGTTGCCGATGATTCAAGAAG CGGTTACCCGAGAGAAGCGAAAACCTGATGGAACATCGATCCCTCTTCGGTGCCATTGTA CATGACTCGCGAGACATGATTGTTAGTATTAGCAATCAATCCCCCATGGGAGGAGTTAGT TAGCATTCCCTGCCAATTTATGGATTGTTTGTAGTGCAAATATGAGAGAAATTTCAACAG TAGGTTTATGCTCTTGTTGTCAATTGTATTTCGTCTGGAGTGATTCCCCGCATTGCTCCA TGTGTGAGGTTTGTTGGTTCACTGCCATGAGAATTCATATATGAATCTGCCCATTCGGCA GACAATTTTCCATATTACTCAGAGAGAAGCTTGAGACAGTACGTAGTCCCTTATATTTGT TGCTTCTAAATGATTTGGCTAGCGTTCACCCAAAATGCATGCATGATCATGAGCAAAATA CCTTTTGATTCAACAGAAAGAGATCCAATCTATGATGTTTGGCAGTACCAAATTCAGGAC ATGAAAAGCAAAAGGGAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAACA GATAGGCTGCCAACATGGTGGCCAAAGGAACGGAGATATTGTCATCCACAACATCATTGA CAGGAATACACTCCACTACAGTAGCTGCTAATGCAACAAGAGCCAGTTTACCAAGTGCCA GATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAGAACAGCATCCTGTGATGCA AAAGATCCATGAGTTAACAATAACAAGGAGTAACAATGCAAAAGAACCAGCAATGCATTC TGAAGCAAAAACCTACAGTGCAGATAGAAGGAAGCCAGAAATGAACATTGAGATGCTTCC TATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCGGAGCCATACCTTCTCCCAACAAT GTCAGCAAAGCCTGAAAAAATAAGAACCAAGAAGGTGGATATACTTAGCAGAAGCATTCA TTTCATCAAGTGAACTGGGGTATTACAAAAAAAAACTGCAGATTTTCCTAAATTCCCAGG AGATCCAACATCTTACCATCACCACCACTCATCATCGACAACGAAACAATCCCAATAGGA GACTGGCGCCAGAAGACCAAAACACTGACCAGCAGCACAATGACATAGTACAGAGGACCT CTCAGCAATTCCCTGTAAGCAACCAAAGATCATGTCAAGGAATACTATTTTGATTTTTGA ATGAAGGAGTATCAGAAATAAGGATCATAGCACGAACTCTGGTTTTCCTTCACGGGTCAC CGATTTTACTAGAGCTTCATCAGTGGAAAGGCGGAGCCCGTAGGTCAGAAGCCTTATGCA GTTCAGCAACGGGACAATTGCCGCGAAGAACCGTGCTTCTGTCGAATTACTGCGAAAGGG GCATGATTTTCTTAAGATCTCTAGTCTGATTTGGTTGTAGAAAACATTTCGATGCTGGAA GAAGCAGTGGCAAGGGAGACCTGAATAGTGGCCAGGAAGACATGAACAGGACTCCGGAGA GCACATGCACAATTTTTCTGCTCAGGTTCTGAGATTAATTATGAAAAGAATCAGAAGTTA ACAAGATATAATTAAGAAAGTAGCAGTCCATCTGAACCAGTCAGATCTTCCCAGCAATTG AAAATAAATTCAAGATACAGATCACATCCACTGAATTGTATATACCATATTTTACTCTCC GGATAACAGTCAACAGAGCTAAAGAATTGATATTTTTTGAAGAATGGCGGAGATCAAAGC TTCA



consensusID : consensus_8047#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1571
fasta sequence
                              [GAGCGAGATCTGGAAGGCGGCCATGGCGCGCCTCGCGCTCCTCGCCGTCCCCGTCGCGCTCCTCCTCTCCCTCTCCTTCCTCCTCCTGCGCCCCGCCTCCCCGCCGCTCCCCTTCTCGCGGCAGCAAGCGGCGTCCGGCCCCGACCGCCGCCGCCTCCTCAGGGTCTACGTTGCGGAGCTCCCCCGCGCGCTCAACCACGGCCTCCTCGACCTCTACTGGTCGCTCCCCGCCGCCGACTCCCGCATCCCGGCCTCCTCCGACCCCGACCACCCGCCGCCGCGGCCTCCGCGCGCGCACTCGCCGTACCCGGATAGCCCACTGATTAAGCAGTACAGCGCCGAGTACTGGCTCCTCGCCTCCCTCCAGCCGGACTGGAGGGACGCGGATGTGGTGTTCGTCCCCTTCTTCGCGACGCTGTCCGCGGAGATGGAGCTCGGGTGGGGCGCCAAGGGCGCGTTCCGCAGGAAGGAGGGGAACGAGGACTACCGCCGCCAGCGGGAGGTCGTCGACCGCGTCACCGCCCACCCAGCGTGGCGGCGCTCCGGTGGCCGTGACCACGTCTTCGTCTTGACAGACCCTGTGGCGATGTGGCATGTCCGTAAAGAGATTGCTCCTGCAATTCTTTTGGTGGTTGATTTTGGCGGATGGTACAAACTTGATTCAAACTCTGCAAGCAGCAATGTTTCTCATATGATACAGCATACGCAAGTGTCATTGCTCAAAGATGTCATTGTACCTTACACTCATTTGCTCCCTACAATGCACTTATCAGAGAATAAGGACCGCCCCACTCTTCTGTACTTCAAGGGAGCCAAACACAGGCATCGGGGTGGTTTGGTACGGGAGAAACTATGGGACTTGATGGTTAATGAGCCTGATGTTGTCATGGAAGAAGGTTATCCTAATGCCACAGGACGTGAACAATCAATAAAAGGGATGCGGACATCAGAGTTTTGCTTGCACCCAGCTGGTGACACCCCAACTTCATGTCGTCTCTTTGATGCTGTTGCTAGTCTGTGCATACCTGTCATTGTCAGCGATGAGATTGAGCTGCCCTTTGAAGGGATGATAGATTACACAGAATTCGCCATTTTTGTCTCAGTCAATAATTCTATGAGACCAAAATGGCTCACAAACTACTTAAGAAATGTCCCCAGGCAGCAGAAAGATGAATTCCGAAGAAACATGGCTCACGTCCAGCCTATATTTGAGTATGATAGTATTTACCCAGGTAGGATGGCCTCTGCTGCACAAGATGGTGCTGTGAACCACATCTGGAAAAAGATTCACCAGAAGTTGCCGATGATTCAAGAAGCGGTTACCCGAGAGAAGCGAAAACCTGATGGAACATCGATCCCTCTTCGGTGCCATTGTACATGACTCGCGAGACATGATTGTTAGTATTAGCAATCAATCCCCCATGGGAGGAGTTAGTTAGCATTCCCTGCCAATTTATGGATTGTTTGTAGTGCAAATATGAGAGAAATTTCAACAGTAGGTTTATGCTCTTGTTGTCAATTGTATTTCGTCTGGAGTGATTCCCCGCATTGCTCCATGTGTGAGGTTTGTT]

[+] EMBL AK064255             [GAGCGAGATCTGGAAGGCGGCCATGGCGCGCCTCGCGCTCCTCGCCGTCCCCGTCGCGCTCCTCCTCTCCCTCTCCTTCCTCCTCCTGCGCCCCGCCTCCCCGCCGCTCCCCTTCTCGCGGCAGCAAGCGGCGTCCGGCCCCGACCGCCGCCGCCTCCTCAGGGTCTACGTTGCGGAGCTCCCCCGCGCGCTCAACCACGGCCTCCTCGACCTCTACTGGTCGCTCCCCGCCGCCGACTCCCGCATCCCGGCCTCCTCCGACCCCGACCACCCGCCGCCGCGGCCTCCGCGCGCGCACTCGCCGTACCCGGATAGCCCACTGATTAAGCAGTACAGCGCCGAGTACTGGCTCCTCGCCTCCCTCCAGCCGGACTGGAGGGACGCGGATGTGGTGTTCGTCCCCTTCTTCGCGACGCTGTCCGCGGAGATGGAGCTCGGGTGGGGCGCCAAGGGCGCGTTCCGCAGGAAGGAGGGGAACGAGGACTACCGCCGCCAGCGGGAGGTCGTCGACCGCGTCACCGCCCACCCAGCGTGGCGGCGCTCCGGTGGCCGTGACCACGTCTTCGTCTTGACAGACCCTGTGGCGATGTGGCATGTCCGTAAAGAGATTGCTCCTGCAATTCTTTTGGTGGTTGATTTTGGCGGATGGTACAAACTTGATTCAAACTCTGCAAGCAGCAATGTTTCTCATATGATACAGCATACGCAAGTGTCATTGCTCAAAGATGTCATTGTACCTTACACTCATTTGCTCCCTACAATGCACTTATCAGAGAATAAGGACCGCCCCACTCTTCTGTACTTCAAGGGAGCCAAACACAGGCATCGGGGTGGTTTGGTACGGGAGAAACTATGGGACTTGATGGTTAATGAGCCTGATGTTGTCATGGAAGAAGGTTATCCTAATGCCACAGGACGTGAACAATCAATAAAAGGGATGCGGACATCAGAGTTTTGCTTGCACCCAGCTGGTGACACCCCAACTTCATGTCGTCTCTTTGATGCTGTTGCTAGTCTGTGCATACCTGTCATTGTCAGCGATGAGATTGAGCTGCCCTTTGAAGGGATGATAGATTACACAGAATTCGCCATTTTTGTCTCAGTCAATAATTCTATGAGACCAAAATGGCTCACAAACTACTTAAGAAATGTCCCCAGGCAGCAGAAAGATGAATTCCGAAGAAACATGGCTCACGTCCAGCCTATATTTGAGTATGATAGTATTTACCCAGGTAGGATGGCCTCTGCTGCACAAGATGGTGCTGTGAACCACATCTGGAAAAAGATTCACCAGAAGTTGCCGATGATTCAAGAAGCGGTTACCCGAGAGAAGCGAAAACCTGATGGAACATCGATCCCTCTTCGGTGCCATTGTACATGACTCGCGAGACATGATTGTTAGTATTAGCAATCAATCCCCCATGGGAGGAGTTAGTTAGCATTCCCTGCCAATTTATGGATTGTTTGTAGTGCAAATATGAGAGAAATTTCAACAGTAGGTTTATGCTCTTGTTGTCAATTGTATTTCGTCTGGAGTGATTCCCCGCATTGCTCCATGTGTGAGGTTTGTT]


>consensus_8047#1 GAGCGAGATCTGGAAGGCGGCCATGGCGCGCCTCGCGCTCCTCGCCGTCCCCGTCGCGCT CCTCCTCTCCCTCTCCTTCCTCCTCCTGCGCCCCGCCTCCCCGCCGCTCCCCTTCTCGCG GCAGCAAGCGGCGTCCGGCCCCGACCGCCGCCGCCTCCTCAGGGTCTACGTTGCGGAGCT CCCCCGCGCGCTCAACCACGGCCTCCTCGACCTCTACTGGTCGCTCCCCGCCGCCGACTC CCGCATCCCGGCCTCCTCCGACCCCGACCACCCGCCGCCGCGGCCTCCGCGCGCGCACTC GCCGTACCCGGATAGCCCACTGATTAAGCAGTACAGCGCCGAGTACTGGCTCCTCGCCTC CCTCCAGCCGGACTGGAGGGACGCGGATGTGGTGTTCGTCCCCTTCTTCGCGACGCTGTC CGCGGAGATGGAGCTCGGGTGGGGCGCCAAGGGCGCGTTCCGCAGGAAGGAGGGGAACGA GGACTACCGCCGCCAGCGGGAGGTCGTCGACCGCGTCACCGCCCACCCAGCGTGGCGGCG CTCCGGTGGCCGTGACCACGTCTTCGTCTTGACAGACCCTGTGGCGATGTGGCATGTCCG TAAAGAGATTGCTCCTGCAATTCTTTTGGTGGTTGATTTTGGCGGATGGTACAAACTTGA TTCAAACTCTGCAAGCAGCAATGTTTCTCATATGATACAGCATACGCAAGTGTCATTGCT CAAAGATGTCATTGTACCTTACACTCATTTGCTCCCTACAATGCACTTATCAGAGAATAA GGACCGCCCCACTCTTCTGTACTTCAAGGGAGCCAAACACAGGCATCGGGGTGGTTTGGT ACGGGAGAAACTATGGGACTTGATGGTTAATGAGCCTGATGTTGTCATGGAAGAAGGTTA TCCTAATGCCACAGGACGTGAACAATCAATAAAAGGGATGCGGACATCAGAGTTTTGCTT GCACCCAGCTGGTGACACCCCAACTTCATGTCGTCTCTTTGATGCTGTTGCTAGTCTGTG CATACCTGTCATTGTCAGCGATGAGATTGAGCTGCCCTTTGAAGGGATGATAGATTACAC AGAATTCGCCATTTTTGTCTCAGTCAATAATTCTATGAGACCAAAATGGCTCACAAACTA CTTAAGAAATGTCCCCAGGCAGCAGAAAGATGAATTCCGAAGAAACATGGCTCACGTCCA GCCTATATTTGAGTATGATAGTATTTACCCAGGTAGGATGGCCTCTGCTGCACAAGATGG TGCTGTGAACCACATCTGGAAAAAGATTCACCAGAAGTTGCCGATGATTCAAGAAGCGGT TACCCGAGAGAAGCGAAAACCTGATGGAACATCGATCCCTCTTCGGTGCCATTGTACATG ACTCGCGAGACATGATTGTTAGTATTAGCAATCAATCCCCCATGGGAGGAGTTAGTTAGC ATTCCCTGCCAATTTATGGATTGTTTGTAGTGCAAATATGAGAGAAATTTCAACAGTAGG TTTATGCTCTTGTTGTCAATTGTATTTCGTCTGGAGTGATTCCCCGCATTGCTCCATGTG TGAGGTTTGTT



consensusID : consensus_8047#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 609
fasta sequence
                              [TTTTTTTTTTTTTTTTTTAAAANCAAAANGNAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAACAGATAGGCTGCCAACATGGTGGCCAAAGGAACGGAGATATTGTCATCCACAACATCATTGACAGGAATACACTCCACTACAGTAGCTGCTAATGCAACAAGAGCCAGTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAGAACAGCATCAGTGCAGATAGAAGGAAGCCAGAAATGAACATTGAGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCGGAGCCATACCTTCTCCCAACAATGTCAGCAAAGCCATCACCACCACTCATCATCGACAACGAAACAATCCCAATAGGAGACTGGCGCCAGAAGACCAAAACACTGACCAGCAGCACAATGACATAGTACAGAGGACCTCTCAGCAATTCCTCTGGTTTTCCTTCACGGGTCACCGATTTTACTAGAGCTTCATCAGTGGAAAGGCGGAGCCCGTAGGNTCAGAGGCCTTATGCAGTTCAGCAACGGGACAATTGCCGCGAAGAACCGNGNCCACGCGTCCGCG]

[-] EMBL AU056832             [TTTTTTTTTTTTTTTTTTAAAANCAAAANGNAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAACAGATAGGCTGCCAACATGGTGGCCAAAGGAACGGAGATATTGTCATCCACAACATCATTGACAGGAATACACTCCACTACAGTAGCTGCTAATGCAACAAGAGCCAGTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAGAACAGCATCAGTGCAGATAGAAGGAAGCCAGAAATGAACATTGAGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCGGAGCCATACCTTCTCCCAACAATGTCAGCAAAGCCATCACCACCACTCATCATCGACAACGAAACAATCCCAATAGGAGACTGGCGCCAGAAGACCAAAACACTGACCAGCAGCACAATGACATAGTACAGAGGACCTCTCAGCAATTCCTCTGGTTTTCCTTCACGGGTCACCGATTTTACTAGAGCTTCATCAGTGGAAAGGCGGAGCCCGTAGGNTCAGAGGCCTTATGCAGTTCAGCAACGGGACAATTGCCGCGAAGAACCGNGNCCACGCGTCCGCG]


>consensus_8047#2 TTTTTTTTTTTTTTTTTTAAAANCAAAANGNAGAAATTTTATAGTCTCAACAACATGAAC TGTAGCCAAATAACAGATAGGCTGCCAACATGGTGGCCAAAGGAACGGAGATATTGTCAT CCACAACATCATTGACAGGAATACACTCCACTACAGTAGCTGCTAATGCAACAAGAGCCA GTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAGAACA GCATCAGTGCAGATAGAAGGAAGCCAGAAATGAACATTGAGATGCTTCCTATCCAGCTCT TGTTCTCATTGAATGGCAGCTTCGCGGAGCCATACCTTCTCCCAACAATGTCAGCAAAGC CATCACCACCACTCATCATCGACAACGAAACAATCCCAATAGGAGACTGGCGCCAGAAGA CCAAAACACTGACCAGCAGCACAATGACATAGTACAGAGGACCTCTCAGCAATTCCTCTG GTTTTCCTTCACGGGTCACCGATTTTACTAGAGCTTCATCAGTGGAAAGGCGGAGCCCGT AGGNTCAGAGGCCTTATGCAGTTCAGCAACGGGACAATTGCCGCGAAGAACCGNGNCCAC GCGTCCGCG



consensusID : consensus_8047#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 417
fasta sequence
                              [CCTTTTGATTCAACAGAAAGAGATCCAATCTATGATGTTTGGCAGTACCAAATTCAGGACATGAAAAGCAAAAGGGAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAACAGATAGGCTGCCAACATGGTGGCCAAAGGAACGGAGATATTGTCATCCACAACATCATTGACAGGAATACACTCCACTACAGTAGCTGCTAATGCAACAAGAGCCAGTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAGAACAGCATCAGTGCAGATAGAAGGAAGCCAGAAATGAACATTGAGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCGGAGCCATACCTTCTCCCAACAATGTCAGCAAAGCCATCACCACCAC]

[-] EMBL AK063069             [CCTTTTGATTCAACAGAAAGAGATCCAATCTATGATGTTTGGCAGTACCAAATTCAGGACATGAAAAGCAAAAGGGAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAACAGATAGGCTGCCAACATGGTGGCCAAAGGAACGGAGATATTGTCATCCACAACATCATTGACAGGAATACACTCCACTACAGTAGCTGCTAATGCAACAAGAGCCAGTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAGAACAGCATCAGTGCAGATAGAAGGAAGCCAGAAATGAACATTGAGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCGGAGCCATACCTTCTCCCAACAATGTCAGCAAAGCCATCACCACCAC]


>consensus_8047#3 CCTTTTGATTCAACAGAAAGAGATCCAATCTATGATGTTTGGCAGTACCAAATTCAGGAC ATGAAAAGCAAAAGGGAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAACA GATAGGCTGCCAACATGGTGGCCAAAGGAACGGAGATATTGTCATCCACAACATCATTGA CAGGAATACACTCCACTACAGTAGCTGCTAATGCAACAAGAGCCAGTTTACCAAGTGCCA GATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAGAACAGCATCAGTGCAGATA GAAGGAAGCCAGAAATGAACATTGAGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATG GCAGCTTCGCGGAGCCATACCTTCTCCCAACAATGTCAGCAAAGCCATCACCACCAC



consensusID : consensus_8047#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 415
fasta sequence
                              [TACCAGCGATTTCGCTTCACTGCAGTCCGTCTACCGAATGGCCGCGGCGGCGCGGCCCGTCGACGTCGTCCGCCACTTCCCGTGCTCCTCCTCGGTCGCCGCCTCCTCCTCCTTGCTGCTGTCGCGCTCCAAGTCCAGGCTCGCGTCTCCTGCGGCGGCGGCGGCGAGCTCCATGCGGCGAAGGCTTGTGCTCGGCGTGGGCGCCGCCGCCGCCCCGGCCGTGGCGGCGCTCGCGGCCTCGGCGACGCCCGCGGNGCTGCGGGACTGCGCCGCCACGCTGCTCATCACCGCGGGCGCGTACTCCCTGGTGCGCGCCTTCGACGGGCTCACGGCGCGGCGGCTCATCGAACAGAACCTGAGCAGAAAAATTGTGCATGTGCTCTCCGGAGTCCTGTTCATGTCTTCCTGGCCACTA]

[+] EMBL AU197632             [TACCAGCGATTTCGCTTCACTGCAGTCCGTCTACCGAATGGCCGCGGCGGCGCGGCCCGTCGACGTCGTCCGCCACTTCCCGTGCTCCTCCTCGGTCGCCGCCTCCTCCTCCTTGCTGCTGTCGCGCTCCAAGTCCAGGCTCGCGTCTCCTGCGGCGGCGGCGGCGAGCTCCATGCGGCGAAGGCTTGTGCTCGGCGTGGGCGCCGCCGCCGCCCCGGCCGTGGCGGCGCTCGCGGCCTCGGCGACGCCCGCGGNGCTGCGGGACTGCGCCGCCACGCTGCTCATCACCGCGGGCGCGTACTCCCTGGTGCGCGCCTTCGACGGGCTCACGGCGCGGCGGCTCATCGAACAGAACCTGAGCAGAAAAATTGTGCATGTGCTCTCCGGAGTCCTGTTCATGTCTTCCTGGCCACTA]


>consensus_8047#4 TACCAGCGATTTCGCTTCACTGCAGTCCGTCTACCGAATGGCCGCGGCGGCGCGGCCCGT CGACGTCGTCCGCCACTTCCCGTGCTCCTCCTCGGTCGCCGCCTCCTCCTCCTTGCTGCT GTCGCGCTCCAAGTCCAGGCTCGCGTCTCCTGCGGCGGCGGCGGCGAGCTCCATGCGGCG AAGGCTTGTGCTCGGCGTGGGCGCCGCCGCCGCCCCGGCCGTGGCGGCGCTCGCGGCCTC GGCGACGCCCGCGGNGCTGCGGGACTGCGCCGCCACGCTGCTCATCACCGCGGGCGCGTA CTCCCTGGTGCGCGCCTTCGACGGGCTCACGGCGCGGCGGCTCATCGAACAGAACCTGAG CAGAAAAATTGTGCATGTGCTCTCCGGAGTCCTGTTCATGTCTTCCTGGCCACTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      GAGATCTGGAAGGCGGCCATGGCGCGCCTCGCGCTCCTCGCCGTCCCCGTCGCGCTCCTC 60
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      CTCTCCCTCTCCTTCCTCCTCCTGCGCCCCGCCTCCCCGCCGCTCCCCTTCTCGCGGCAG 120
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      CAAGCGGCGTCCGGCCCCGACCGCCGCCGCCTCCTCAGGGTCTACGTTGCGGAGCTCCCC 180
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      CGCGCGCTCAACCACGGCCTCCTCGACCTCTACTGGTCGCTCCCCGCCGCCGACTCCCGC 240
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      ATCCCGGCCTCCTCCGACCCCGACCACCCGCCGCCGCGGCCTCCGCGCGCGCACTCGCCG 300
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TACCCGGATAGCCCACTGATTAAGCAGTACAGCGCCGAGTACTGGCTCCTCGCCTCCCTC 360
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      CAGCCGGGCTCGTCGTCCGCGCCCGCCGTCGGGGTGGTCGCGGACTGGAGGGACGCGGAT 420
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      GTGGTGTTCGTCCCCTTCTTCGCGACGCTGTCCGCGGAGATGGAGCTCGGGTGGGGCGCC 480
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      AAGGGCGCGTTCCGCAGGAAGGAGGGGAACGAGGACTACCGCCGCCAGCGGGAGGTCGTC 540
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      GACCGCGTCACCGCCCACCCAGCGTGGCGGCGCTCCGGTGGCCGTGACCACGTCTTCGTC 600
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TTGACAGGTTTTGTTAAATATTGAGGCATTCTTTGACAGACCCTGTGGCGATGTGGCATG 660
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TCCGTAAAGAGATTGCTCCTGCAATTCTTTTGGTGGTTGATTTTGGCGGATGGTACAAAC 720
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TTGATTCAAACTCTGCAAGCAGCAATGTTTCTCATATGATACAGCATACGCAAGTGTCAT 780
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TGCTCAAAGATGTCATTGTACCTTACACTCATTTGCTCCCTACAATGCACTTATCAGAGA 840
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      ATAAGGACCGCCCCACTCTTCTGTACTTCAAGGGAGCCAAACACAGGCATCGGGGTGGTT 900
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TGGTACGGGAGAAACTATGGGACTTGATGGTTAATGAGCCTGATGTTGTCATGGAAGAAG 960
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      GTTATCCTAATGCCACAGGACGTGAACAATCAATAAAAGGGATGCGGACATCAGAGTTTT 1020
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      GCTTGCACCCAGCTGGTGACACCCCAACTTCATGTCGTCTCTTTGATGCTGTTGCTAGTC 1080
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TGTGCATACCTGTCATTGTCAGCGATGAGATTGAGCTGCCCTTTGAAGGGATGATAGATT 1140
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      ACACAGAATTCGCCATTTTTGTCTCAGTCAATAATTCTATGAGACCAAAATGGCTCACAA 1200
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      ACTACTTAAGAAATGTCCCCAGGCAGCAGAAAGATGAATTCCGAAGAAACATGGCTCACG 1260
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TCCAGCCTATATTTGAGTATGATAGTATTTACCCAGGTAGGATGGCCTCTGCTGCACAAG 1320
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      ATGGTGCTGTGAACCACATCTGGAAAAAGATTCACCAGAAGTTGCCGATGATTCAAGAAG 1380
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      CGGTTACCCGAGAGAAGCGAAAACCTGATGGAACATCGATCCCTCTTCGGTGCCATTGTA 1440
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      CATGACTCGCGAGACATGATTGTTAGTATTAGCAATCAATCCCCCATGGGAGGAGTTAGT 1500
consensus_8047#1      ---------------------------------------------GAGCGAGATCTGGAA 15
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TAGCATTCCCTGCCAATTTATGGATTGTTTGTAGTGCAAATATGAGAGAAATTTCAACAG 1560
consensus_8047#1      GGCGGCCATGGCGCGCCTCGCGCTCCTCGCCGTCCCCGTCGCGCTCCTCCTCTCCCTCTC 75
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TAGGTTTATGCTCTTGTTGTCAATTGTATTTCGTCTGGAGTGATTCCCCGCATTGCTCCA 1620
consensus_8047#1      CTTCCTCCTCCTGCGCCCCGCCTCCCCGCCGCTCCCCTTCTCGCGGCAGCAAGCGGCGTC 135
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TGTGTGAGGTTTGTTGGTTCACTGCCATGAGAATTCATATATGAATCTGCCCATTCGGCA 1680
consensus_8047#1      CGGCCCCGACCGCCGCCGCCTCCTCAGGGTCTACGTTGCGGAGCTCCCCCGCGCGCTCAA 195
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      GACAATTTTCCATATTACTCAGAGAGAAGCTTGAGACAGTACGTAGTCCCTTATATTTGT 1740
consensus_8047#1      CCACGGCCTCCTCGACCTCTACTGGTCGCTCCCCGCCGCCGACTCCCGCATCCCGGCCTC 255
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TGCTTCTAAATGATTTGGCTAGCGTTCACCCAAAATGCATGCATGATCATGAGCAAAATA 1800
consensus_8047#1      CTCCGACCCCGACCACCCGCCGCCGCGGCCTCCGCGCGCGCACTCGCCGTACCCGGATAG 315
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ---------------------------------------------TTTTTTTTTTTTTTT 15
consensus_8047#3      CCTTTTGATTCAACAGAAAGAGATCCAATCTATGATGTTTGGCAGTACCAAATTCAGGAC 60
consensus_8047#0      CCTTTTGATTCAACAGAAAGAGATCCAATCTATGATGTTTGGCAGTACCAAATTCAGGAC 1860
consensus_8047#1      CCCACTGATTAAGCAGTACAGCGCCGAGTACTGGCTCCTCGCCTCCCTCCAGCCGGACTG 375
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      TTTAAAANCAAAANGNAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAAC- 74
consensus_8047#3      ATGAAAAGCAAAAGGGAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAAC- 119
consensus_8047#0      ATGAAAAGCAAAAGGGAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAAC- 1919
consensus_8047#1      GAGGGACGCGGATGTGGTGTTCGTCCCCTTCTTCGCGACGCTGTCCGCGGAGATGGAGCT 435
consensus_8047#4      --TACCAGCGATTTCGCTTCACTGCAGTCCGTCTACCGAATGG-CCGCGGCGGCGCGGCC 57
                              *                      *   *        * *  *        * 

consensus_8047#2      -AGATAGGCTGCCAACATGGTGGCC----------AAAGGAACGGAGA-TATTGTCATCC 122
consensus_8047#3      -AGATAGGCTGCCAACATGGTGGCC----------AAAGGAACGGAGA-TATTGTCATCC 167
consensus_8047#0      -AGATAGGCTGCCAACATGGTGGCC----------AAAGGAACGGAGA-TATTGTCATCC 1967
consensus_8047#1      CGGGTGGGGCGCCAAGGGCGCGTTCCGCAGGAAGGAGGGGAACGAGGACTACCGCCGCCA 495
consensus_8047#4      CGTCGACGTCGTC--CGCCACTTCC-----------CGTGCTCCTCCTCGGTCGCCGCCT 104
                             *  * *           *              *  *          * *  * 

consensus_8047#2      ACAACA--TCATTGACAGGAATACACTCCACT-ACAGTAGC--TGCTAATGCAACAAGAG 177
consensus_8047#3      ACAACA--TCATTGACAGGAATACACTCCACT-ACAGTAGC--TGCTAATGCAACAAGAG 222
consensus_8047#0      ACAACA--TCATTGACAGGAATACACTCCACT-ACAGTAGC--TGCTAATGCAACAAGAG 2022
consensus_8047#1      GCGGGAGGTCGTCGACCGCGTCACCGCCCACCCAGCGTGGCGGCGCTCCGGTGGCCGTGA 555
consensus_8047#4      CCTCC---TCCTTGCTGCTGTCGCGCTCCAAGTCCAGGCTCGCGTCTCCTGCGGCGGCGG 161
                       *      ** * *         *   ***      *   *    **   *   *     

consensus_8047#2      CCA-GTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAG 236
consensus_8047#3      CCA-GTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAG 281
consensus_8047#0      CCA-GTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAG 2081
consensus_8047#1      CCACGTCTTCGTCTTGACAGACCCTGTGGCGATGTGGCATGTCCGTAAAGAGATTGCTCC 615
consensus_8047#4      CGGCGAGCTCCATGCGGCGAAGGCTTGTGCTCGGCGTGGGCGCCGCCGCCGCCCCGGCCG 221
                      *   *    *     * *  *  *         * *      **                

consensus_8047#2      -AACAGCATC-------------------------------------------------- 245
consensus_8047#3      -AACAGCATC-------------------------------------------------- 290
consensus_8047#0      -AACAGCATCCTGTGATGCAAAAGATCCATGAGTTAACAATAACAAGGAGTAACAATGCA 2140
consensus_8047#1      -TGCAATTCTTTTGGTGGTTGATTTTGGCGGATGGTACAAACTTGATTCAAACTCTGCAA 674
consensus_8047#4      TGGCGGCGCTCGCGGCCTCGGCGACGCCCGCG---------------------------- 253
                         *                                                        

consensus_8047#2      ------------------------------------AGTGCAGATAGAAGGAAGCCA--G 267
consensus_8047#3      ------------------------------------AGTGCAGATAGAAGGAAGCCA--G 312
consensus_8047#0      AAAGAACCAGCAATGCATTCTGAAGCAAAAACCTACAGTGCAGATAGAAGGAAGCCA--G 2198
consensus_8047#1      GCAGCAATGTTTCTCATATGATACAGCATACGCAAGTGTCATTGCTCAAAGATGTCATTG 734
consensus_8047#4      -----------------------------------GNGCTGCGGGACTGCGCCGCCACGC 278
                                                           *            *  * **   

consensus_8047#2      AAATGAACATTG-AGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCG 326
consensus_8047#3      AAATGAACATTG-AGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCG 371
consensus_8047#0      AAATGAACATTG-AGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCG 2257
consensus_8047#1      TACCTTACACTC-ATTTGCTCCCTACAATGCACTTATCAGAGAATAAGGACCGCCCCACT 793
consensus_8047#4      TGCTCATCACCGCGGGCGCGTACTCCCTGGTGCGCGCCTTC-------GACGGGCTCACG 331
                             **        **   **     *  *               * * *   * * 

consensus_8047#2      GAGCCATACCTTCT-----CCCAACAATGTCAGCAAAGCC-------ATCACCACCACTC 374
consensus_8047#3      GAGCCATACCTTCT-----CCCAACAATGTCAGCAAAGCC-------ATCACCACCAC-- 417
consensus_8047#0      GAGCCATACCTTCT-----CCCAACAATGTCAGCAAAGCCTGAAAAAATAAGAACCAAGA 2312
consensus_8047#1      CTTCTGTACTTCAAGGGAGCCAAACACAGGCATCGGGGTGGTTTGGTACGGGAGAAACTA 853
consensus_8047#4      GCGCGGCGGCTCATCGAA-CAGAACCTGAGCAGAAAAATTGT---GCATGTGCTCTCCGG 387
                         *      *        *  ***     **               *            

consensus_8047#2      AT---------CATCGACAACGAAACAATCCCAATAGGAGACTGGCGCCAGAAGACCAAA 425
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      AGGTGGATATACTTAGCAGAAGCATTCATTTCATCAAGTGAACTGGGGTATTACAAAAAA 2372
consensus_8047#1      TGGGACTTGATGGTTAATGAGCCTGATGTTGTCATGGAAGAAGGTTATCCTAATGCCACA 913
consensus_8047#4      AGTCCTGTTCATGTCTTCCTGGCCACTA-------------------------------- 415
                                                                                  

consensus_8047#2      --ACACTGACCAGCAGCACAATGACATAGTACAGAGGACCTCTCAGCAATTCCTCTGGTT 483
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      --AAACTGCAGATTTTCCTAAATTCCCAGGAGATCCAACATCTTACCATCACCACCACTC 2430
consensus_8047#1      GGACGTGAACAATCAATAAAAGGGATGCGGACATCAGAGTTTTGCTTGCACCCAGCTGGT 973
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      TTCCTTCACGGGTCACCGATTTTACTAGAGCTTCATCAGTGGAAAGGCGGAGCCCGTAGG 543
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      ATCATCGACAACGAAACAATCCCAATAGGAGACTGGCGCCAGAAGACCAAAACACTGACC 2490
consensus_8047#1      GACACCCCAACTTCATGTCGTCTCTTTGATGCTGTTGCTAGTCTGTGCATACCTGTCATT 1033
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      NTCAGAGGCCTTATGCAGTTCAGCAA----CGGGACAATTGCCGCGAAGAACCGNGNCCA 599
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      AGCAGCACAATGACATAGTACAGAGGACCTCTCAGCAATTCCCTGTAAGCAACCAAAGAT 2550
consensus_8047#1      GTCAGCGATGAGATTGAGCTGCCCTTTGAAGGGATGATAGATTACACAGAATTCGCCATT 1093
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      CGCGTCCGCG-------------------------------------------------- 609
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      CATGTCAAGGAATACTATTTTGATTTTTGAATGAAGGAGTATCAGAAATAAGGATCATAG 2610
consensus_8047#1      TTTGTCTCAGTCAATAATTCTATGAGACCAAAATGGCTCACAAACTACTTAAGAAATGTC 1153
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      CACGAACTCTGGTTTTCCTTCACGGGTCACCGATTTTACTAGAGCTTCATCAGTGGAAAG 2670
consensus_8047#1      CCCAGGCAGCAGAAAGATGAATTCCGAAGAAACATGGCTCACGTCCAGCCTATATTTGAG 1213
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      GCGGAGCCCGTAGGTCAGAAGCCTTATGCAGTTCAGCAACGGGACAATTGCCGCGAAGAA 2730
consensus_8047#1      TATGATAGTATTTACCCAGGTAGGATGGCCTCTGCTGCACAAGATGGTGCTGTGAACCAC 1273
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      CCGTGCTTCTGTCGAATTACTGCGAAAGGGGCATGATTTTCTTAAGATCTCTAGTCTGAT 2790
consensus_8047#1      ATCTGGAAAAAGATTCACCAGAAGTTGCCGATGATTCAAGAAGCGGTTACCCGAGAGAAG 1333
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TTGGTTGTAGAAAACATTTCGATGCTGGAAGAAGCAGTGGCAAGGGAGACCTGAATAGTG 2850
consensus_8047#1      CGAAAACCTGATGGAACATCGATCCCTCTTCGGTGCCATTGTACATGACTCGCGAGACAT 1393
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      GCCAGGAAGACATGAACAGGACTCCGGAGAGCACATGCACAATTTTTCTGCTCAGGTTCT 2910
consensus_8047#1      GATTGTTAGTATTAGCAATCAATCCCCCATGGGAGGAGTTAGTTAGCATTCCCTGCCAAT 1453
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      GAGATTAATTATGAAAAGAATCAGAAGTTAACAAGATATAATTAAGAAAGTAGCAGTCCA 2970
consensus_8047#1      TTATGGATTGTTTGTAGTGCAAATATGAGAGAAATTTCAACAGTAGGTTTATGCTCTTGT 1513
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      TCTGAACCAGTCAGATCTTCCCAGCAATTGAAAATAAATTCAAGATACAGATCACATCCA 3030
consensus_8047#1      TGTCAATTGTATTTCGTCTGGAGTGATTCCCCGCATTGCTCCATGTGTGAGGTTTGTT-- 1571
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ------------------------------------------------------------
consensus_8047#3      ------------------------------------------------------------
consensus_8047#0      CTGAATTGTATATACCATATTTTACTCTCCGGATAACAGTCAACAGAGCTAAAGAATTGA 3090
consensus_8047#1      ------------------------------------------------------------
consensus_8047#4      ------------------------------------------------------------
                                                                                  

consensus_8047#2      ----------------------------------
consensus_8047#3      ----------------------------------
consensus_8047#0      TATTTTTTGAAGAATGGCGGAGATCAAAGCTTCA 3124
consensus_8047#1      ----------------------------------
consensus_8047#4      ----------------------------------
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)