These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8060#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1467 fasta sequence [TAAGATCTCTCTCTCCATTAGCGCCGCCGCTGCCGCCGCCGCCAAAAATCGCCGGCGAAATGGACGCCTTCCTCGCCGGAATCCCGCAGCTCCGCAGGCCGGCGGCGCTGATCGCGTCGTGCTGCGCGCTGGTCCTCCTCGCCACCGTCCTCCTCCTCCCGCGCGCTCCTCCCGCCGCCCCGGAGCAGCTTGCCTCCGCCGCCGCCGCCGCCGCCGTCCGCCTCGACGCGAGGGTCGAGCGGAGGAGCGGCAACGAGGTGCTGTGGCAGCTGCCGCCGCCGACGACGCCTCCCCGCGCCGCGGTGTTCGTGGCCCCGGGGTGCACCATCCGCGCCACCGACTTCTTCGACGCCTCGCCGGGGTGCCCGCGCTGCGCGGGGCTCCCCGAGGAGCGCCGCTTCACGCGCGAGGCGCTCCGCCGCGGGTACGCCGTGCTCGCGGTGTCCAGCCGCGCGGAGTGCTGGTCCCTCGACACCGGGGACGGGGGCGAGCTCGCCGCCGTGGAGTCCATCATCGAGTGGTGGGTCAAGGAGAGGCACCCCAACCAGCTCGCCGGCCTCCCGCTCGTCGGGATCGGCGCCTCTTCAGGCGGGTACTTCCTCTCCGCGCTGGCGGCGAGGGTCAGGTTCAGCAGCGTCGCAATCATGATCGCCGAGGGCGTGTTCGCCACGATGGAGGAGATCCCGGCGAGGTACCCGCCGGCGCTGTTCGTGCAAATGCCCAAGGACGGCGAGAGGGCGCGGGAGGTGGCGGCGAGCATGGGCAAGCTCAGAGGGAGCCGCGTCAGCGTGCGGGAGATCCAATGCGGCGAGTTCGCCGTGAGCGCCCAGTTCTTGGCGGCGAGGATACCCGGGTTGACCCTCGCCGTCGCCGATGGGCTGGTCGATGTGCTTCGCCGGAAGGGGTTCGTGGATGAGAAGGGGTTTCTGAAGAATGACGGGAGGAGCACGCCGTGGAAGAAGGCGGCGGAGGAGGCGAAGATCTTGCCGGAGGAATTCCGGCTGGAGAGGCATGTCACGGAGGAGCTGAATCTTGCATATGCGTACCATGAGTTTACCAGCCTCAAGAATGGGGAAATCTTCGACTGGTTTGAGTCGCATATGGATCATAAGAGCTGAAAGTGTTCTAGTGGCAATGCTACTGAAACTGATTTGAAGCGAGCAATTCGATGGTGGATCCAGCTGATGCTTCTGATTTTGAGGAATGGAATGCACAATCATTGATTCAAGAGAGATGGGAAGATGGAGGAAAACCTCGTAAGGCTTCTTCTCGCAGTTTACCGTTCACAATGCCCACTTGTAGTTTCTAATACAATTACGTTCCATTCTTCCATTGTTGTTGTTGATGTAACAGGCGTTTTATTACCATTGTATCTT-TAACAGAGGAATTACTTCAATCCACAGAAAAATGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCG] [+] EMBL AK105482 [TAAGATCTCTCTCTCCATTAGCGCCGCCGCTGCCGCCGCCGCCAAAAATCGCCGGCGAAATGGACGCCTTCCTCGCCGGAATCCCGCAGCTCCGCAGGCCGGCGGCGCTGATCGCGTCGTGCTGCGCGCTGGTCCTCCTCGCCACCGTCCTCCTCCTCCCGCGCGCTCCTCCCGCCGCCCCGGAGCAGCTTGCCTCCGCCGCCGCCGCCGCCGCCGTCCGCCTCGACGCGAGGGTCGAGCGGAGGAGCGGCAACGAGGTGCTGTGGCAGCTGCCGCCGCCGACGACGCCTCCCCGCGCCGCGGTGTTCGTGGCCCCGGGGTGCACCATCCGCGCCACCGACTTCTTCGACGCCTCGCCGGGGTGCCCGCGCTGCGCGGGGCTCCCCGAGGAGCGCCGCTTCACGCGCGAGGCGCTCCGCCGCGGGTACGCCGTGCTCGCGGTGTCCAGCCGCGCGGAGTGCTGGTCCCTCGACACCGGGGACGGGGGCGAGCTCGCCGCCGTGGAGTCCATCATCGAGTGGTGGGTCAAGGAGAGGCACCCCAACCAGCTCGCCGGCCTCCCGCTCGTCGGGATCGGCGCCTCTTCAGGCGGGTACTTCCTCTCCGCGCTGGCGGCGAGGGTCAGGTTCAGCAGCGTCGCAATCATGATCGCCGAGGGCGTGTTCGCCACGATGGAGGAGATCCCGGCGAGGTACCCGCCGGCGCTGTTCGTGCAAATGCCCAAGGACGGCGAGAGGGCGCGGGAGGTGGCGGCGAGCATGGGCAAGCTCAGAGGGAGCCGCGTCAGCGTGCGGGAGATCCAATGCGGCGAGTTCGCCGTGAGCGCCCAGTTCTTGGCGGCGAGGATACCCGGGTTGACCCTCGCCGTCGCCGATGGGCTGGTCGATGTGCTTCGCCGGAAGGGGTTCGTGGATGAGAAGGGGTTTCTGAAGAATGACGGGAGGAGCACGCCGTGGAAGAAGGCGGCGGAGGAGGCGAAGATCTTGCCGGAGGAATTCCGGCTGGAGAGGCATGTCACGGAGGAGCTGAATCTTGCATATGCGTACCATGAGTTTACCAGCCTCAAGAATGGGGAAATCTTCGACTGGTTTGAGTCGCATATGGATCATAAGAGCTGAAAGTGTTCTAGTGGCAATGCTACTGAAACTGATTTGAAGCGAGCAATTCGATGGTGGATCCAGCTGATGCTTCTGATTTTGAGGAATGGAATGCACAATCATTGATTCAAGAGAGATGGGAAGATGGAGGAAAACCTCGTAAGGCTTCTTCTCGCAGTTTACCGTTCACAATGCCCACTTGTAGTTTCTAATACAATTACGTTCCATTCTTCCATTGTTGTTGTTGATGTAACAGGCGTTTTATTACCATTGTATCTTGTAACAGAGGAATTACTTCAATCCACAGAAAAATGATAAA ] [+] EMBL CF316109 [ TGATGCTTCTGATTTTGAGGAATGGAATGCACAATCATTGATTCAAGAGAGATGGGAAGATGGAGGAAAACCTCGTAAGGCTTCTTCTCGCAGTTTACCGTTCACAATGCCCACTTGTAGTTTCTAATACAATTACGTTCCATTCTTCCATTGTTGTTGTTGATGTAACAGGCGTTTTATTACCATTGTATCTT TAACAGAGGAATTACTTCAATCCACAGAAAAATGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCG] [+] EMBL CF316896 [ TGATGCTTCTGATTTTGAGGAATGGAATGCACAATCATTGATTCAAGAGAGATGGGAAGATGGAGGAAAACCTCGTAAGGCTTCTTCTCGCAGTTTACCGTTCACAATGCCCACTTGTAGTTTCTAATACAATTACGTTCCATTCTTCCATTGTTGTTGTTGATGTAACAGGCGTTTTATTACCATTGTATCTT TAACAGAGGAATTACTTCAATCCACAGAAAAATGATTAAAAAAAAAAA ] [-] EMBL CF316110 [ GATGCTTTTGATTTTGAGGAATGGAATGCCCAATCATTGATTCAAAAAAGATGGGAAGATGGAGGAAAACCTTGTAAGGCTTTTTTTCGCAGTTTACCGTTCACAATGCCCACTTGTAGTTTTTAATACAATTACGTTCCATTTTTCCATTGTTGTTGTTGATGTAACAGGCGTTTTATTACCATTGTATTTT TAACAAAGGAATTACTTCAATCCCCAGAAAAATGATAAAAAAAAAAAAAAAAAAAAAAAA ] [-] EMBL CF316897 [ GATGCTTCTGATTTTGAGGAATGGAATGCACAATCATTGATTCAAGAGAGATGGGAAGATGGAGGAAAACCTCGTAAGGCTTCTTCTCGCAGTTTACCGTTCACAATGCCCACTTGTAGTTTTTAATACAATTACGTTCCATTCTTCCATTGTTGTTGTTGATGTAACAGGCGTTTTATTACCATTGTATCTT TAACAAAGGAATTACTTCAATCCACAGAAAAATGATAAAAAAAAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||