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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8074#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3376 fasta sequence
[CTCTTCCTTCCCACTCCCTCCGGAGAAGCCGTCAACACGCAAACCCTCCCTTCGAACTCCGGCGATCACCGGCGGCCACACCACAGTCCCCCTGCCGCCGCTGCCGGCGGTCTTGGTCCGGCGGCCATGGACGACTTCGTCCTCGTCGACGACTTCGGCCCGTTCAAGCCGCCGGCCGCCTCCGCCTCCACCACCTCCTTCTCCGCCTCCCACTACGACGACATGTTCGACTCCTACTTCAACCGCTCGGCGGAGCCCGCCGAGCCGTCCCCCTCGTCCTCCGCGCCGTCGCCGCCTCCGCCCGTGTTCGACAAGCCGGTGTTCGACGACGCCGACGCCGACGCCGCCGATCCCTTCGACGCGATTCCCTTGTTCGGAGATGGG---GGCGATGGCGGCGAAGGGGAGGACTTCCTCGATAGCCTCGGGAAGGGCGCGAAGAAGCCAGATGTGAGCGAGCCGGAGGTGGTGGGGTTTGACGACGATTTAATCCCAGCTCTTGGGAACACCAAATCGAAGACGCCCGTGGGTGAGGAAGAGGTGGAGCAGGAGGCGGAAGCGGTGGGGTTCGTCGACGACGTAATCCCCGAGTGGTTCGGTGGGAGCGCGAGCACGACGCCGATGAAGCCGACACCGCAGGCGGAGCCCAAGGCGACGGGGTTTGAAGACGATGTGATTCCCGGGTTTGGTGAAAGCACAAGCCATCACGATTCACCATGGGAGGAGCCTAGAACTAGACCGGAAAACGAATCAATTTCATCCAGCAAAACGAGTGTGAGCATGCCAGGAGATGCTTTTGTTACTCTAGGTGCTACATCCAACTTGGGAAATTCAAATTTTGGATTGTTTACTGATCATTTGGATAACATGGGCAAGTCAGAGAGCAAAAATATGGACCCCTGTTCTACTGCCAATGGGATGTTAGATAGTTCTAATATTTTTGTTGGGGTTCCAAAACCAATGTCCTCGTCTTCATTTGCATCTGAGAAAGAGAGTGTTTTTGGTGATAGTAAATCCTTGGATGGCATTTACAGCATGAACCATTCCATTAAAATGCCTAAGGAGAAACCAGTCCAGCAAGCTTCAGCTGAAACAATTAGCAGTATATTGCCTGAGATGCATATCCATGAAGCTCCTGGAACCACTGGTTTCAATAATTCAGATCCACTTTCTACAAGTATGCAGGACCAGTTGCCAGAGGAGAATCAATGTTCCAAAATGTCCGACGACGTGTGGTTGACTGTTTCAGATGTTGTTTTAGTGACACAGCCTACGAGTGCTCCACCTCCTTCACGGCCTCCCCCTACGCTTGCCGCCAAGAAAGGACCAACGGAATCCAACACTAGTAATGCATATCCACATGATCATAATCAAGGTTACAATCCTTTTATAAGTTCAACAAATACTTCTAAAACACCCAAAATTGATGAATTAGAAGATTTTGTCATGGCAAAGCCTTCTAGCTTGGCTAATGGTTGTCTGCAAGATCTAAATCATAATGGAATTGGGATTGGACAAGATTCATCTACATCTGCTGCAGGTTTCATGGATTGGGCTGAGCTAAAACACTCTAAAGGGGTGAACCAAGGGAACTTTGATTCTTTGTTCGCTAGCAGTCAGTACCAAGAAAAAGAGAAAGCAGTGCTCTATGCTTCTGGAATGGAAAGCAGAGATGAGGAAGAACTATTAGAGCATGAGAAAAAACAAAGAGAAAAGGAAGAGGAACAGAGAAAACTAGAAAGGGACAGGGAGGAAGAGCTTGAGAGGGAAAGAGAAATGATGAGAAGAAGGGAACATGAGGAGCGGAAGAGGCGTGAAAAAGAGAGAGAGGCGAGGCACATTGTGGAGAAGGCCATGCGAGAGGCACGTGAAAGGGCAGCTGCTGAGGCACGCATGCAAGCTGAGAGGGAGGCTCGTCAAAGAGCAGAGCGAGCTGCTGTACAGAAAGCAGCAGCAGAAGCACGAGAGAGAGCAGCAGCAGAAGCACGGGAGAGAGCTGCAAAGGCGGCTGCAGAAGCGAAGGAAAGGGTGGCTGAGGAGGCTAGGGAAAGGGCTGCTAAAGCTGCTGCAGAAGCCAGGGAACGGGCAGCTACAGAAGCTAGGGAAAAGGCAGCAGCAGAAGCTCGGGCTAAAGCTGAGCGAGCTGCTGTTGATAAAGTTGCAGCAGAAGCACGAAGAAGGGCTGAAAGAGCAGCAGTTGAGAGGGCTGCTGCAGAAGCTCGACAAAGGGCTGCTAATGAAGCTAGAAAAAGGGCTGAAGCTGAAGCTCGAGCAAGAGAAAGTCAGCAGAAAACAGCTCAACCTGATCTCGACTCATTCTTTGGTATGCCTTCTAGATCAAGCAGTGTACCGAGATCACAGACTGCAACAACGAATCCTTTTGATGTCCAACCTCAAGGTGGTTCAGATTTTGGTTCTATAAGGAGGACTTCTTCTGGTTCAGCTTCTCCCTTTGCACAACCTCCATCTACTAATCTTATGGATGACCTCTCTTCTATATTTGGAGCACCTTCATCATCTGCTGTGTTTCAAGAAGTGGATGGAGAGAGTGAAGAGAGAAGGAAGGCAAGATTGGAGCGTCACCAGAGGACAATGGAGCGTGCGGCAAAAGCTCTTGCTGAGAAAAATGAGCGTGATTTGCAAGTTCAGTGGGAGCAGGAAGAGAGACATAGAATTGGTGAAACACTTGATTTTGAGATAAAGAGGTGGGCCGCTGGGAAAGAAGGCAATTTGCGAGCCTTGTTGTCAACGTTGCAATATGTTCTTTGGCCTGAATGTGGGTGGCGACCTGTATCATTGACTGATTTGATTACAGCCGCATCTGTCAAGAAAGAATACAGGAAAGCAACATTATGCATCCATCCTGATAAGGTGCAGCAAAAGGGTGCAAATCTTCAACAGAAATACATTGCAGAAAAGGTGTTCGACCTTCTGAAGGAAGCATGGAACAAATTCAACTCGGAAGAACTCTTCTAACACTTAATCGTTTGTCAATCCCTGAGCCACTGAGGTACTAGGAAGGAAACAAATGACATACTGGTAAAGCTTTTATTGTTTTCTATCATTATAATAGCTCTTTTTCTTTTTTGCTTATTCTTTGGTCTGATTCTTTGGATTCATTCTCATGTAACCATAGTTTGCTTCCTGGAACTTGTGTGTTGTATGTATCTGCCAATTTTGGTACCCATGGCTGTGTAAGTAGATTTATAGAGAAACAACCCTGTAAATCCGGTGATGTTAAACATTCCATTTTGGGAGAGTAGTATATATTTTTAGAGAAAATTTATGGTCTTTGAGAAAGTATCAGGAGGTACTAAAATATTACACTAAAACTTTGTATGTTCTATGGGTGATGTAGTACTTGGTAAATCTGTATCAA]
[+] EMBL AK119920 [CTCTTCCTTCCCACTCCCTCCGGAGAAGCCGTCAACACGCAAACCCTCCCTTCGAACTCCGGCGATCACCGGCGGCCACACCACAGTCCCCCTGCCGCCGCTGCCGGCGGTCTTGGTCCGGCGGCCATGGACGACTTCGTCCTCGTCGACGACTTCGGCCCGTTCAAGCCGCCGGCCGCCTCCGCCTCCACCACCTCCTTCTCCGCCTCCCACTACGACGACATGTTCGACTCCTACTTCAACCGCTCGGCGGAGCCCGCCGAGCCGTCCCCCTCGTCCTCCGCGCCGTCGCCGCCTCCGCCCGTGTTCGACAAGCCGGTGTTCGACGACGCCGACGCCGACGCCGCCGATCCCTTCGACGCGATTCCCTTGTTCGGAGATGGG GGCGATGGCGGCGAAGGGGAGGACTTCCTCGATAGCCTCGGGAAGGGCGCGAAGAAGCCAGATGTGAGCGAGCCGGAGGTGGTGGGGTTTGACGACGATTTAATCCCAGCTCTTGGGAACACCAAATCGAAGACGCCCGTGGGTGAGGAAGAGGTGGAGCAGGAGGCGGAAGCGGTGGGGTTCGTCGACGACGTAATCCCCGAGTGGTTCGGTGGGAGCGCGAGCACGACGCCGATGAAGCCGACACCGCAGGCGGAGCCCAAGGCGACGGGGTTTGAAGACGATGTGATTCCCGGGTTTGGTGAAAGCACAAGCCATCACGATTCACCATGGGAGGAGCCTAGAACTAGACCGGAAAACGAATCAATTTCATCCAGCAAAACGAGTGTGAGCATGCCAGGAGATGCTTTTGTTACTCTAGGTGCTACATCCAACTTGGGAAATTCAAATTTTGGATTGTTTACTGATCATTTGGATAACATGGGCAAGTCAGAGAGCAAAAATATGGACCCCTGTTCTACTGCCAATGGGATGTTAGATAGTTCTAATATTTTTGTTGGGGTTCCAAAACCAATGTCCTCGTCTTCATTTGCATCTGAGAAAGAGAGTGTTTTTGGTGATAGTAAATCCTTGGATGGCATTTACAGCATGAACCATTCCATTAAAATGCCTAAGGAGAAACCAGTCCAGCAAGCTTCAGCTGAAACAATTAGCAGTATATTGCCTGAGATGCATATCCATGAAGCTCCTGGAACCACTGGTTTCAATAATTCAGATCCACTTTCTACAAGTATGCAGGACCAGTTGCCAGAGGAGAATCAATGTTCCAAAATGTCCGACGACGTGTGGTTGACTGTTTCAGATGTTGTTTTAGTGACACAGCCTACGAGTGCTCCACCTCCTTCACGGCCTCCCCCTACGCTTGCCGCCAAGAAAGGACCAACGGAATCCAACACTAGTAATGCATATCCACATGATCATAATCAAGGTTACAATCCTTTTATAAGTTCAACAAATACTTCTAAAACACCCAAAATTGATGAATTAGAAGATTTTGTCATGGCAAAGCCTTCTAGCTTGGCTAATGGTTGTCTGCAAGATCTAAATCATAATGGAATTGGGATTGGACAAGATTCATCTACATCTGCTGCAGGTTTCATGGATTGGGCTGAGCTAAAACACTCTAAAGGGGTGAACCAAGGGAACTTTGATTCTTTGTTCGCTAGCAGTCAGTACCAAGAAAAAGAGAAAGCAGTGCTCTATGCTTCTGGAATGGAAAGCAGAGATGAGGAAGAACTATT ]
[+] EMBL AK100317 [ CGGAGAAGCCGTCAACACGCAAACCCTCCCTTCGAACTCCGGCGATCACCGGCGGCCACACCACAGTCCCCCTGCCGCCGCTGCCGGCGGTCTTGGTCCGGCGGCCATGGACGACTTCGTCCTCGTCGACGACTTCGGCCCGTTCAAGCCGCCGGCCGCCTCCGCCTCCACCACCTCCTTCTCCGCCTCCCACTACGACGACATGTTCGACTCCTACTTCAACCGCTCGGCGGAGCCCGCCGAGCCGTCCCCCTCGTCCTCCGCGCCGTCGCCGCCTCCGCCCGTGTTCGACAAGCCGGTGTTCGACGACGCCGACGCCGACGCCGCCGATCCCTTCGACGCGATTCCCTTGTTCGGAGATGGG GGCGATGGCGGCGAAGGGGAGGACTTCCTCGATAGCCTCGGGAAGGGCGCGAAGAAGCCAGATGTGAGCGAGCCGGAGGTGGTGGGGTTTGACGACGATTTAATCCCAGCTCTTGGGAACACCAAATCGAAGACGCCCGTGGGTGAGGAAGAGGTGGAGCAGGAGGCGGAAGCGGTGGGGTTCGTCGACGACGTAATCCCCGAGTGGTTCGGTGGGAGCGCGAGCACGACGCCGATGAAGCCGACACCGCAGGCGGAGCCCAAGGCGACGGGGTTTGAAGACGATGTGATTCCCGGGTTTGGTGAAAGCACAAGCCATCACGATTCACCATGGGAGGAGCCTAGAACTAGACCGGAAAACGAATCAATTTCATCCAGCAAAACGAGTGTGAGCATGCCAGGAGATGCTTTTGTTACTCTAGGTGCTACATCCAACTTGGGAAATTCAAATTTTGGATTGTTTACTGATCATTTGGATAACATGGGCAAGTCAGAGAGCAAAAATATGGACCCCTGTTCTACTGCCAATGGGATGTTAGATAGTTCTAATATTTTTGTTGGGGTTCCAAAACCAATGTCCTCGTCTTCATTTGCATCTGAGAAAGAGAGTGTTTTTGGTGATAGTAAATCCTTGGATGGCATTTACAGCATGAACCATTCCATTAAAATGCCTAAGGAGAAACCAGTCCAGCAAGCTTCAGCTGAAACAATTAGCAGTATATTGCCTGAGATGCATATCCATGAAGCTCCTGGAACCACTGGTTTCAATAATTCAGATCCACTTTCTACAAGTATGCAGGACCAGTTGCCAGAGGAGAATCAATGTTCCAAAATGTCCGACGACGTGTGGTTGACTGTTTCAGATGTTGTTTTAGTGACACAGCCTACGAGTGCTCCACCTCCTTCACGGCCTCCCCCTACGCTTGCCGCCAAGAAAGGACCAACGGAATCCAACACTAGTAATGCATATCCACATGATCATAATCAAGGTTACAATCCTTTTATAAGTTCAACAAATACTTCTAAAACACCCAAAATTGATGAATTAGAAGATTTTGTCATGGCAAAGCCTTCTAGCTTGGCTAATGGTTGTCTGCAAGATCTAAATCATAATGGAATTGGGATTGGACAAGATTCATCTACATCTGCTGCAGGTTTCATGGATTGGGCTGAGCTAAAACACTCTAAAGGGGTGAACCAAGGGAACTTTGATTCTTTGTTCGCTAGCAGTCAGTACCAAGAAAAAGAGAAAGCAGTGCTCTATGCTTCTGGAATGGAAAGCAGAGATGAGGAAGAACTATTAGAGCATGAGAAAAAACAAAGAGAAAAGGAAGAGGAACAGAGAAAACTAGAAAGGGACAGGGAGGAAGAGCTTGAGAGGGAAAGAGAAATGATGAGAAGAAGGGAACATGAGGAGCGGAAGAGGCGTGAAAAAGAGAGAGAGGCGAGGCACATTGTGGAGAAGGCCATGCGAGAGGCACGTGAAAGGGCAGCTGCTGAGGCACGCATGCAAGCTGAGAGGGAGGCTCGTCAAAGAGCAGAGCGAGCTGCTGTACAGAAAGCAGCAGCAGAAGCACGAGAGAGAGCAGCAGCAGAAGCACGGGAGAGAGCTGCAAAGGCGGCTGCAGAAGCGAAGGAAAGGGTGGCTGAGGAGGCTAGGGAAAGGGCTGCTAAAGCTGCTGCAGAAGCCAGGGAACGGGCAGCTACAGAAGCTAGGGAAAAGGCAGCAGCAGAAGCTCGGGCTAAAGCTGAGCGAGCTGCTGTTGATAAAGTTGCAGCAGAAGCACGAAGAAGGGCTGAAAGAGCAGCAGTTGAGAGGGCTGCTGCAGAAGCTCGACAAAGGGCTGCTAATGAAGCTAGAAAAAGGGCTGAAGCTGAAGCTCGAGCAAGAGAAAGTCAGCAGAAAACAGCTCAACCTGATCTCGACTCATTCTTTGGTATGCCTTCTAGATCAAGCAGTGTACCGAGATCACAGACTGCAACAACGAATCCTTTTGATGTCCAACCTCAAGGTGGTTCAGATTTTGGTTCTATAAGGAGGACTTCTTCTGGTTCAGCTTCTCCCTTTGCACAACCTCCATCTACTAATCTTATGGATGACCTCTCTTCTATATTTGGAGCACCTTCATCATCTGCTGTGTTTCAAGAAGTGGATGGAGAGAGTGAAGAGAGAAGGAAGGCAAGATTGGAGCGTCACCAGAGGACAATGGAGCGTGCGGCAAAAGCTCTTGCTGAGAAAAATGAGCGTGATTTGCAAGTTCAGTGGGAGCAGGAAGAGAGACATAGAATTGGTGAAACACTTGATTTTGAGATAAAGAGGTGGGCCGCTGGGAAAGAAGGCAATTTGCGAGCCTTGTTGTCAACGTTGCAATATGTTCTTTGGCCTGAATGTGGGTGGCGACCTGTATCATTGACTGATTTGATTACAGCCGCATCTGTCAAGAAAGAATACAGGAAAGCAACATTATGCATCCATCCTGATAAGGTGCAGCAAAAGGGTGCAAATCTTCAACAGAAATACATTGCAGAAAAGGTGTTCGACCTTCTGAAGGAAGCATGGAACAAATTCAACTCGGAAGAACTCTTCTAACACTTAATCGTTTGTCAATCCCTGAGCCACTGAGGTACTAGGAAGGAAACAAATGACATACTGGTAAAGCTTTTATTGTTTTCTATCATTATAATAGCTCTTTTTCTTTTTTGCTTATTCTTTGGTCTGATTCTTTGGATTCATTCTCATGTAACCATAGTTTGCTTCCTGGAACTTGTGTGTTGTATGTATCTGCCAATTTTGGTACCCATGGCTGTGTAAGTAGATTTATAGAGAAACAACCCTGTAAATCCGGTGATGTTAAACATTCCATTTTGGGAGAGTAGTATATATTTTTAGAGAAAATTTATGGTCTTTGAGAAAGTATCAGGAGGTACTAAAATATTACACTAAAACTTTGTATGTTCTATGGGTGATGTAGTACTTGGTAAATCTGTATCAA]
[+] EMBL CB634318 [ CCTCGTCGACGACTTCGGCCCGTTCAAGCCGCCGGCCGCCTCCGCCTCCACCACCTCCTTCTCCGCCTCTCACTACGACGACATGTTCGACTCCTACTTCAACCGCTCGGCGGAGCCCGCCGAGCCGTCCCCCTCGTCCTCCGCGCCGTCGCCGCCTCCGCCCGTGTTCGACAAGCCGGTGTTCGA CGACGCCGACGCCGCCGATCCCTTCGACGCGATTCCCTTGTTCGGAGATGGGGGCGGCGGTGGCGGCGAAGGGGAGGACTTCCTCGATAGCCTCGGGAAGGGCGCGAAGAAGCCAGATGTGAGCGAGCCGGAGGTGGTGGGGTTTGACGACGATTTAATCCCAGCTCTTGGGAACACCAAATCGAAGACGCCCGTGGGTGAG GAGGTGGAGCAGGAGGCGGAAGCGGTGGGGTTCGTCGACGACGTAATCCCCGAGTGGTTCGGTGGGAGCACGAGCACGACGCCGATAAAGCCGACACCGCAGGCGGAGCCCAAGGCGACGGGGTTTGAAGACGATGTGATTCCCGGGTTTGGTGAAAGCACAAGCCATCACGATTCACCATGGGAGGAGCCTAGAACTAGACCGGAAAACGAATCAATTTCATCCAGCAAAACGAGTGTGAGCATGCCAGGAGATGCTTTTGTTACTCTAGGTGCTACATCCAACTTGGGAAATTCAAATTTTGGATTGTTTACTGATCATTTGGATAACATGGGCAAGTCAGAGAGCAAAAATATGGACCCCTGTTCTACTGCCAATGGGATGTTTGATAGTTCTAATATTTTTGTTGGGGTTCCAAAACCAATGTCCTCGTCTTCA ]
[+] EMBL CF196600 [ GAGGGCTGCTGCAGAAGCTCGACAAAGGGCTGCTAATGAAGCTAGAAAAAGGGCTGAAGCTGAAGCTCGAGCAAGAGAAAGTCAGCAGAAAACAGCTCAACCTGATCTCGACTCATTCTTTGGTATGCCTTCTAGATCAAGCAGTGTACGGAGATCACAGACTGCAACAACGAATCCTTTTGATGTCCAACCTCAAGGTGGTTCAGATTTTGGTTCTATAAGGAGGACTTCTTCTGGTTCAGCTTCTCCCTTTGCACAACCTCCATCTACTAATCTTATGGATGACCTCTCTTCTATATTTGGAGCACCTTCATCATCTGCTGTGTTTCAAGAAGTGGATGGAGAGAGTGAAGAGAGAAGGAAGGCAAGATTGGAGCGTCANCAGNNNACAATGGAGCGTGCNNNNAAAGCTCTTGCTGNNNAAAATGAGCGTGATT ]
consensusID : consensus_8074#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 865 fasta sequence
[GGCACGCATGCAAGCTGAGAGGGAGGCTCGTCAAAGAGCAGAGCGAGCTGCTGTACAGAAAGCAGCAGCAGAAGCACGGGAGAGAGCAGCAGCAGAAGCACGGGAGAGAGCTGCAAAGGCGGCTGCAGAAGCGAAGGAAAGGGTGGCTGAGGAGGCTAGGGAAAAGGCTGCTAAAGCTGCTGCAGAAGCCAGGGAAAGGGCTGCAGCAGAAGCAAGGGAAAGAGTAGCCAAAGCTGCTGCAGAAGCCAGGGAACGGGCAGCTACAGAAGCTAGGGAAAAGGCAGCAGCAGAAGCTCGGGCTAAAGCTGAGCGAGCTGCTGTTGATAAAGTTGCAGCAGAAGCACGAAGAAGGGCTGAAAGAGCAGCAGTTGAGAGGGCTGCTGCAGAAGCTCGACAAAGGGCTGCTAATGAAGCTAGAAAAAGGGCTGAAGCTGAAGCTCGAGCAAGAGAAAGTCAGCAGAAAACAGCTCAACCTGATCTCGACTCATTCTTTGGTATGCCTTCTAGATCAAGCAGTGTACCGAGGTCACAGACTGCAACAACGAATCCTTTTGATGTCCAACCTCAAGGTGGTTCAGATTTTGGTTCTATAAGGAGGACTTCTTCTGGTTCAGCTTCTCCCTTTGCACAACCTCCATCTACTAATCTTATGGATGACCTCTCTTCTATATTTGGAGCACCTTCATCATCTGCTGTGTTTCAAGAAGTGGATGGAGAGAGTGAAGAGAGAAGGAAGGCAAGATTGGAGCGTCACCAGAGGACAATGGAGCGTGCGGCAAAAGCTCTTGCTGAGAAAAATGAGCGTGATTTGCAAGTTCAGTGGGAGCAGGAAGAGAGACATAGAATTGGTGAAACACTTGATTTT]
[-] EMBL CB634319 [GGCACGCATGCAAGCTGAGAGGGAGGCTCGTCAAAGAGCAGAGCGAGCTGCTGTACAGAAAGCAGCAGCAGAAGCACGGGAGAGAGCAGCAGCAGAAGCACGGGAGAGAGCTGCAAAGGCGGCTGCAGAAGCGAAGGAAAGGGTGGCTGAGGAGGCTAGGGAAAAGGCTGCTAAAGCTGCTGCAGAAGCCAGGGAAAGGGCTGCAGCAGAAGCAAGGGAAAGAGTAGCCAAAGCTGCTGCAGAAGCCAGGGAACGGGCAGCTACAGAAGCTAGGGAAAAGGCAGCAGCAGAAGCTCGGGCTAAAGCTGAGCGAGCTGCTGTTGATAAAGTTGCAGCAGAAGCACGAAGAAGGGCTGAAAGAGCAGCAGTTGAGAGGGCTGCTGCAGAAGCTCGACAAAGGGCTGCTAATGAAGCTAGAAAAAGGGCTGAAGCTGAAGCTCGAGCAAGAGAAAGTCAGCAGAAAACAGCTCAACCTGATCTCGACTCATTCTTTGGTATGCCTTCTAGATCAAGCAGTGTACCGAGGTCACAGACTGCAACAACGAATCCTTTTGATGTCCAACCTCAAGGTGGTTCAGATTTTGGTTCTATAAGGAGGACTTCTTCTGGTTCAGCTTCTCCCTTTGCACAACCTCCATCTACTAATCTTATGGATGACCTCTCTTCTATATTTGGAGCACCTTCATCATCTGCTGTGTTTCAAGAAGTGGATGGAGAGAGTGAAGAGAGAAGGAAGGCAAGATTGGAGCGTCACCAGAGGACAATGGAGCGTGCGGCAAAAGCTCTTGCTGAGAAAAATGAGCGTGATTTGCAAGTTCAGTGGGAGCAGGAAGAGAGACATAGAATTGGTGAAACACTTGATTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8074#0 CTCTTCCTTCCCACTCCCTCCGGAGAAGCCGTCAACACGCAAACCCTCCCTTCGAACTCC 60
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GGCGATCACCGGCGGCCACACCACAGTCCCCCTGCCGCCGCTGCCGGCGGTCTTGGTCCG 120
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GCGGCCATGGACGACTTCGTCCTCGTCGACGACTTCGGCCCGTTCAAGCCGCCGGCCGCC 180
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 TCCGCCTCCACCACCTCCTTCTCCGCCTCCCACTACGACGACATGTTCGACTCCTACTTC 240
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 AACCGCTCGGCGGAGCCCGCCGAGCCGTCCCCCTCGTCCTCCGCGCCGTCGCCGCCTCCG 300
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CCCGTGTTCGACAAGCCGGTGTTCGACGACGCCGACGCCGACGCCGCCGATCCCTTCGAC 360
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GCGATTCCCTTGTTCGGAGATGGGGGCGATGGCGGCGAAGGGGAGGACTTCCTCGATAGC 420
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CTCGGGAAGGGCGCGAAGAAGCCAGATGTGAGCGAGCCGGAGGTGGTGGGGTTTGACGAC 480
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GATTTAATCCCAGCTCTTGGGAACACCAAATCGAAGACGCCCGTGGGTGAGGAAGAGGTG 540
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GAGCAGGAGGCGGAAGCGGTGGGGTTCGTCGACGACGTAATCCCCGAGTGGTTCGGTGGG 600
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 AGCGCGAGCACGACGCCGATGAAGCCGACACCGCAGGCGGAGCCCAAGGCGACGGGGTTT 660
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GAAGACGATGTGATTCCCGGGTTTGGTGAAAGCACAAGCCATCACGATTCACCATGGGAG 720
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GAGCCTAGAACTAGACCGGAAAACGAATCAATTTCATCCAGCAAAACGAGTGTGAGCATG 780
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CCAGGAGATGCTTTTGTTACTCTAGGTGCTACATCCAACTTGGGAAATTCAAATTTTGGA 840
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 TTGTTTACTGATCATTTGGATAACATGGGCAAGTCAGAGAGCAAAAATATGGACCCCTGT 900
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 TCTACTGCCAATGGGATGTTAGATAGTTCTAATATTTTTGTTGGGGTTCCAAAACCAATG 960
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 TCCTCGTCTTCATTTGCATCTGAGAAAGAGAGTGTTTTTGGTGATAGTAAATCCTTGGAT 1020
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GGCATTTACAGCATGAACCATTCCATTAAAATGCCTAAGGAGAAACCAGTCCAGCAAGCT 1080
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 TCAGCTGAAACAATTAGCAGTATATTGCCTGAGATGCATATCCATGAAGCTCCTGGAACC 1140
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 ACTGGTTTCAATAATTCAGATCCACTTTCTACAAGTATGCAGGACCAGTTGCCAGAGGAG 1200
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 AATCAATGTTCCAAAATGTCCGACGACGTGTGGTTGACTGTTTCAGATGTTGTTTTAGTG 1260
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 ACACAGCCTACGAGTGCTCCACCTCCTTCACGGCCTCCCCCTACGCTTGCCGCCAAGAAA 1320
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GGACCAACGGAATCCAACACTAGTAATGCATATCCACATGATCATAATCAAGGTTACAAT 1380
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CCTTTTATAAGTTCAACAAATACTTCTAAAACACCCAAAATTGATGAATTAGAAGATTTT 1440
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GTCATGGCAAAGCCTTCTAGCTTGGCTAATGGTTGTCTGCAAGATCTAAATCATAATGGA 1500
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 ATTGGGATTGGACAAGATTCATCTACATCTGCTGCAGGTTTCATGGATTGGGCTGAGCTA 1560
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 AAACACTCTAAAGGGGTGAACCAAGGGAACTTTGATTCTTTGTTCGCTAGCAGTCAGTAC 1620
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CAAGAAAAAGAGAAAGCAGTGCTCTATGCTTCTGGAATGGAAAGCAGAGATGAGGAAGAA 1680
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CTATTAGAGCATGAGAAAAAACAAAGAGAAAAGGAAGAGGAACAGAGAAAACTAGAAAGG 1740
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GACAGGGAGGAAGAGCTTGAGAGGGAAAGAGAAATGATGAGAAGAAGGGAACATGAGGAG 1800
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CGGAAGAGGCGTGAAAAAGAGAGAGAGGCGAGGCACATTGTGGAGAAGGCCATGCGAGAG 1860
consensus_8074#1 -------GGCACGCATGCAAGCTGAGAGGGAGGCTCGTCAAAGAGCAGA----GCGAGCT 49
*** * * ** * ***** * * *** ** *****
consensus_8074#0 GCACGTGAAAGGGCAGCTGCTGAGGCACGCATGCAAGCTGAGAGGGAGGCTCGTCAAAGA 1920
consensus_8074#1 GCTGTACAGAAAGCAGCAGCAGAAGCACGGGAGAGAGCAGCAGCAGAAGCACG------- 102
** * * ***** ** ** ***** * *** * ** ** **
consensus_8074#0 GCAGAGCGAGCTGCTGTACAGAAAGCAGCAGCAGAAGCACGAGAGAGAGCAGCAGCAGAA 1980
consensus_8074#1 --GGAGAGAGCTGC------AAAGGCGGCTGCAGAAGCGAAGGAAAGGGTGGCTGAGGAG 154
*** ******* ** ** ** ******** ** ** * ** * **
consensus_8074#0 GCACGGGAGAGAGCTGCAAAGGCGGCTGCAGAAGCGAAGGAAAGGGTGGCTGAGGAGGCT 2040
consensus_8074#1 GCTAGGGAAAAGGCTGCTAAAGCTGCTGCAGAAGCCAGGGAAAGGGCTGCAGCAGAAGCA 214
** **** * ***** ** ** *********** * ******** ** * ** **
consensus_8074#0 AGGGAAAGGGCTGCTAAAGCTGCTGCAGAAGCCAGGGAACGGGCAGCTACAGAAGCTAGG 2100
consensus_8074#1 AGGGAAAGAGTAGCCAAAGCTGCTGCAGAAGCCAGGGAACGGGCAGCTACAGAAGCTAGG 274
******** * ** *********************************************
consensus_8074#0 GAAAAGGCAGCAGCAGAAGCTCGGGCTAAAGCTGAGCGAGCTGCTGTTGATAAAGTTGCA 2160
consensus_8074#1 GAAAAGGCAGCAGCAGAAGCTCGGGCTAAAGCTGAGCGAGCTGCTGTTGATAAAGTTGCA 334
************************************************************
consensus_8074#0 GCAGAAGCACGAAGAAGGGCTGAAAGAGCAGCAGTTGAGAGGGCTGCTGCAGAAGCTCGA 2220
consensus_8074#1 GCAGAAGCACGAAGAAGGGCTGAAAGAGCAGCAGTTGAGAGGGCTGCTGCAGAAGCTCGA 394
************************************************************
consensus_8074#0 CAAAGGGCTGCTAATGAAGCTAGAAAAAGGGCTGAAGCTGAAGCTCGAGCAAGAGAAAGT 2280
consensus_8074#1 CAAAGGGCTGCTAATGAAGCTAGAAAAAGGGCTGAAGCTGAAGCTCGAGCAAGAGAAAGT 454
************************************************************
consensus_8074#0 CAGCAGAAAACAGCTCAACCTGATCTCGACTCATTCTTTGGTATGCCTTCTAGATCAAGC 2340
consensus_8074#1 CAGCAGAAAACAGCTCAACCTGATCTCGACTCATTCTTTGGTATGCCTTCTAGATCAAGC 514
************************************************************
consensus_8074#0 AGTGTACCGAGATCACAGACTGCAACAACGAATCCTTTTGATGTCCAACCTCAAGGTGGT 2400
consensus_8074#1 AGTGTACCGAGGTCACAGACTGCAACAACGAATCCTTTTGATGTCCAACCTCAAGGTGGT 574
*********** ************************************************
consensus_8074#0 TCAGATTTTGGTTCTATAAGGAGGACTTCTTCTGGTTCAGCTTCTCCCTTTGCACAACCT 2460
consensus_8074#1 TCAGATTTTGGTTCTATAAGGAGGACTTCTTCTGGTTCAGCTTCTCCCTTTGCACAACCT 634
************************************************************
consensus_8074#0 CCATCTACTAATCTTATGGATGACCTCTCTTCTATATTTGGAGCACCTTCATCATCTGCT 2520
consensus_8074#1 CCATCTACTAATCTTATGGATGACCTCTCTTCTATATTTGGAGCACCTTCATCATCTGCT 694
************************************************************
consensus_8074#0 GTGTTTCAAGAAGTGGATGGAGAGAGTGAAGAGAGAAGGAAGGCAAGATTGGAGCGTCAC 2580
consensus_8074#1 GTGTTTCAAGAAGTGGATGGAGAGAGTGAAGAGAGAAGGAAGGCAAGATTGGAGCGTCAC 754
************************************************************
consensus_8074#0 CAGAGGACAATGGAGCGTGCGGCAAAAGCTCTTGCTGAGAAAAATGAGCGTGATTTGCAA 2640
consensus_8074#1 CAGAGGACAATGGAGCGTGCGGCAAAAGCTCTTGCTGAGAAAAATGAGCGTGATTTGCAA 814
************************************************************
consensus_8074#0 GTTCAGTGGGAGCAGGAAGAGAGACATAGAATTGGTGAAACACTTGATTTTGAGATAAAG 2700
consensus_8074#1 GTTCAGTGGGAGCAGGAAGAGAGACATAGAATTGGTGAAACACTTGATTTT--------- 865
***************************************************
consensus_8074#0 AGGTGGGCCGCTGGGAAAGAAGGCAATTTGCGAGCCTTGTTGTCAACGTTGCAATATGTT 2760
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CTTTGGCCTGAATGTGGGTGGCGACCTGTATCATTGACTGATTTGATTACAGCCGCATCT 2820
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GTCAAGAAAGAATACAGGAAAGCAACATTATGCATCCATCCTGATAAGGTGCAGCAAAAG 2880
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GGTGCAAATCTTCAACAGAAATACATTGCAGAAAAGGTGTTCGACCTTCTGAAGGAAGCA 2940
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 TGGAACAAATTCAACTCGGAAGAACTCTTCTAACACTTAATCGTTTGTCAATCCCTGAGC 3000
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CACTGAGGTACTAGGAAGGAAACAAATGACATACTGGTAAAGCTTTTATTGTTTTCTATC 3060
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 ATTATAATAGCTCTTTTTCTTTTTTGCTTATTCTTTGGTCTGATTCTTTGGATTCATTCT 3120
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CATGTAACCATAGTTTGCTTCCTGGAACTTGTGTGTTGTATGTATCTGCCAATTTTGGTA 3180
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 CCCATGGCTGTGTAAGTAGATTTATAGAGAAACAACCCTGTAAATCCGGTGATGTTAAAC 3240
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 ATTCCATTTTGGGAGAGTAGTATATATTTTTAGAGAAAATTTATGGTCTTTGAGAAAGTA 3300
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 TCAGGAGGTACTAAAATATTACACTAAAACTTTGTATGTTCTATGGGTGATGTAGTACTT 3360
consensus_8074#1 ------------------------------------------------------------
consensus_8074#0 GGTAAATCTGTATCAA 3376
consensus_8074#1 ----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||