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Oryza sativa
cluster # 8075 cluster # 8075       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8075#0 length = 1732 sequences # 3  
consensus_8075#1 length = 1670 sequences # 2  

consensusID : consensus_8075#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1732
fasta sequence
                              [TCAGGCGTCCGGGCGGTATTCATCGGTCGCGCCCGCACATCGACGCCCACGCCGCCGCACGCTAAACCCGCCCGCTCGGCCGCTCCACGCGCGCACCGGCCCCCTTCTTCCGTCATGGACTCCGGCTACTCCTCCTCCTACGCCGCCGCCGCCGGGATGCACGTCGTGATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCGTGCCTCGACCTCGCCCAGCGCCTCGCGTCGCGGGGCCACCGCGTGTCGTTCGTCTCCACGCCGCGGAACATATCCCGCCTCCCGCCGGTGCGCCCCGCGCTCGCGCCGCTCGTCGCCTTCGTGGCGCTGCCGCTCCCGCGCGTCGAGGGGCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCCACGACAGGCCGGACATGGTCGAGCTCCACCGGAGGGCCTTCGACGGGCTCGCCGCGCCCTTCTCGGAGTTCTTGGGCACCGCGTGCGCCGACTGGGTCATCGTCGACGTCTTCCACCACTGGGCCGCAGCCGCCGCTCTCGAGCACAAGGTGCCATGTGCAATGATGTTGTTGGGCTCTGCACATATGATCGCTTCCATAGCAGACAGACGGCTCGAGCGCGCGGAGACAGAGTCGCCTGCGGCTGCCGGGCAGGGACGCCCAGCGGCGGCGCCAACGTTCGAGGTGGCGAGGATGAAGTTGATACGAACCAAAGGCTCATCGGGAATGTCCCTCGCCGAGCGCTTCTCCTTGACGCTCTCGAGGAGCAGCCTCGTCGTCGGGCGGAGCTGCGTGGAGTTCGAGCCGGAGACCGTCCCGCTCCTGTCGACGCTCCGCGGTAAGCCTATTACCTTCCTTGGCCTTATGCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCCACCGTCCGCTGGCTCGACGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGCGAGGTGCCACTGGGAGTGGAGAAGGTCCACGAGCTCGCGCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTTAGGAAGCCCACTGGCGTCTCCGACGCCGACCTCCTCCCCGCCGGCTTCGAGGAGCGCACGCGCGGCCGCGGCGTCGTGGCGACGAGATGGGTTCCTCAGATGAGCATACTGGCGCACGCCGCCGTGGGCGCGTTCCTGACCCACTGCGGCTGGAACTCGACCATCGAGGGGCTCATGTTCGGCCACCCGCTTATCATGCTGCCGATCTTCGGCGACCAGGGACCGAACGCGCGGCTAATCGAGGCGAAGAACGCCGGATTGCAGGTGGCAAGAAACGACGGCGATGGATCGTTCGACCGAGAAGGCGTCGCGGCGGCGATTCGTGCAGTCGCGGTGGAGGAAGAAAGCAGCAAAGTGTTTCAAGCCAAAGCCAAGAAGCTGCAGGAGATCGTCGCGGACATGGCCTGCCATGAGAGGTACATCGACGGATTCATTCAGCAATTGAGATCTTACAAGGATTGAAGCATCTCAGGATGTACACCTGCAACAGTGCAACTACAAAATCCTTGGAATAAAATGATTTTTGTTTTGTAGTCCACTTACCCAAAATATGCAAAGGCCGAACGGTGGGGAAAATTCTAATCCTGATTTTTTTTTCATTTTTGTTTTTCTTTGTTATTTATCAATTTGATACCGCCCAGACAAAGTTGAAATTTAATTGTAAAACTTTTTATAGTACATGGAACACGCA]

[+] EMBL AK119905             [TCAGGCGTCCGGGCGGTATTCATCGGTCGCGCCCGCACATCGACGCCCACGCCGCCGCACGCTAAACCCGCCCGCTCGGCCGCTCCACGCGCGCACCGGCCCCCTTCTTCCGTCATGGACTCCGGCTACTCCTCCTCCTACGCCGCCGCCGCCGGGATGCACGTCGTGATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCGTGCCTCGACCTCGCCCAGCGCCTCGCGTCGCGGGGCCACCGCGTGTCGTTCGTCTCCACGCCGCGGAACATATCCCGCCTCCCGCCGGTGCGCCCCGCGCTCGCGCCGCTCGTCGCCTTCGTGGCGCTGCCGCTCCCGCGCGTCGAGGGGCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCCACGACAGGCCGGACATGGTCGAGCTCCACCGGAGGGCCTTCGACGGGCTCGCCGCGCCCTTCTCGGAGTTCTTGGGCACCGCGTGCGCCGACTGGGTCATCGTCGACGTCTTCCACCACTGGGCCGCAGCCGCCGCTCTCGAGCACAAGGTGCCATGTGCAATGATGTTGTTGGGCTCTGCACATATGATCGCTTCCATAGCAGACAGACGGCTCGAGCGCGCGGAGACAGAGTCGCCTGCGGCTGCCGGGCAGGGACGCCCAGCGGCGGCGCCAACGTTCGAGGTGGCGAGGATGAAGTTGATACGAACCAAAGGCTCATCGGGAATGTCCCTCGCCGAGCGCTTCTCCTTGACGCTCTCGAGGAGCAGCCTCGTCGTCGGGCGGAGCTGCGTGGAGTTCGAGCCGGAGACCGTCCCGCTCCTGTCGACGCTCCGCGGTAAGCCTATTACCTTCCTTGGCCTTATGCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCCACCGTCCGCTGGCTCGACGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGCGAGGTGCCACTGGGAGTGGAGAAGGTCCACGAGCTCGCGCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTTAGGAAGCCCACTGGCGTCTCCGACGCCGACCTCCTCCCCGCCGGCTTCGAGGAGCGCACGCGCGGCCGCGGCGTCGTGGCGACGAGATGGGTTCCTCAGATGAGCATACTGGCGCACGCCGCCGTGGGCGCGTTCCTGACCCACTGCGGCTGGAACTCGACCATCGAGGGGCTCATGTTCGGCCACCCGCTTATCATGCTGCCGATCTTCGGCGACCAGGGACCGAACGCGCGGCTAATCGAGGCGAAGAACGCCGGATTGCAGGTGGCAAGAAACGACGGCGATGGATCGTTCGACCGAGAAGGCGTCGCGGCGGCGATTCGTGCAGTCGCGGTGGAGGAAGAAAGCAGCAAAGTGTTTCAAGCCAAAGCCAAGAAGCTGCAGGAGATCGTCGCGGACATGGCCTGCCATGAGAGGTACATCGACGGATTCATTCAGC ATTGAGATCTTACAAGGATTGAAGCATCTCAGGATGTACACCTGCAACAGTGCAACTACAAAATCCTTGGAATAAAATGATTTTTGTTTTGTAGTCCACTTACCCAAAATATGCAAAGGCCGAACGGTGGGGAAAATTCTAATCCTGATTTTTTTTTCATTTTTGTTTTTCTTTGTTATTTATCAATTTGATACCGCCCAGACAAAGTTGAAATTTAATTGTAAAACTTTTTATAGTACATGGAACACGCA]
[+] EMBL AK121682             [                                                                             GGCCGCTCCACGCGCGCACCGGCCCCCTTCTTCCGTCATGGACTCCGGCTACTCCTCCTCCTACGCCGCCGCCGCCGGGATGCACGTCGTGATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCGTGCCTCGACCTCGCCCAGCGCCTCGCGTCGCGGGGCCACCGCGTGTCGTTCGTCTCCACGCCGCGGAACATATCCCGCCTCCCGCCGGTGCGCCCCGCGCTCGCGCCGCTCGTCGCCTTCGTGGCGCTGCCGCTCCCGCGCGTCGAGGGGCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCCACGACAGGCCGGACATGGTCGAGCTCCACCGGAGGGCCTTCGACGGGCTCGCCGCGCCCTTCTCGGAGTTCTTGGGCACCGCGTGCGCCGACTGGGTCATCGTCGACGTCTTCCACCACTGGGCCGCAGCCGCCGCTCTCGAGCACAAGGTGCCATGTGCAATGATGTTGTTGGGCTCTGCACATATGATCGCTTCCATAGCAGACAGACGGCTCGAGCGCGCGGAGACAGAGTCGCCTGCGGCTGCCGGGCAGGGACGCCCAGCGGCGGCGCCAACGTTCGAGGTGGCGAGGATGAAGTTGATACGAACCAAAGGCTCATCGGGAATGTCCCTCGCCGAGCGCTTCTCCTTGACGCTCTCGAGGAGCAGCCTCGTCGTCGGGCGGAGCTGCGTGGAGTTCGAGCCGGAGACCGTCCCGCTCCTGTCGACGCTCCGCGGTAAGCCTATTACCTTCCTTGGCCTTATGCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCCACCGTCCGCTGGCTCGACGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGCGAGGTGCCACTGGGAGTGGAGAAGGTCCACGAGCTCGCGCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTTAGGAAGCCCACTGGCGTCTCCGACGCCGACCTCCTCCCCGCCGGCTTCGAGGAGCGCACGCGCGGCCGCGGCGTCGTGGCGACGAGATGGGTTCCTCAGATGAGCATACTGGCGCACGCCGCCGTGGGCGCGTTCCTGACCCACTGCGGCTGGAACTCGACCATCGAGGGGCTCATGTTCGGCCACCCGCTTATCATGCTGCCGATCTTCGGCGACCAGGGACCGAACGCGCGGCTAATCGAGGCGAAGAACGCCGGATTGCAGGTGGCAAGAAACGACGGCGATGGATCGTTCGACCGAGAAGGCGTCGCGGCGGCGATTCGTGCAGTCGCGGTGGAGGAAGAAAGCAGCAAAGTGTTTCAAGCCAAAGCCAAGAAGCTGCAGGAGATCGTCGCGGACATGGCCTGCCATGAGAGGTACATCGACGGATTCATTCAGCAATTGAGATCTTACAAGGATTGAAGCATCTCAGGATGTACACCTGCAACAGTGCAACTACAAAATCCTTGGAATAAAATGATTTTTGT                                                                                                                                                                    ]
[+] EMBL AK105398             [                                                                                                        TTCTTCCGTCATGGACTCCGGCTACTCCTCCTCCTACGCCGCCGCCGCCGGGATGCACGTCGTGATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCGTGCCTCGACCTCGCCCAGCGCCTCGCGTCGCGGGGCCACCGCGTGTCGTTCGTCTCCACGCCGCGGAACATATCCCGCCTCCCGCCGGTGCGCCCCGCGCTCGCGCCGCTCGTCGCCTTCGTGGCGCTGCCGCTCCCGCGCGTCGAGGGGCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCCACGACAGGCCGGACATGGTCGAGCTCCACCGGAGGGCCTTCGACGGGCTCGCCGCGCCCTTCTCGGAGTTCTTGGGCACCGCGTGCGCCGACTGGGTCATCGTCGACGTCTTCCACCACTGGGCCGCAGCCGCCGCTCTCGAGCACAAGGTGCCATGTGCAATGATGTTGTTGGGCTCTGCACATATGATCGCTTCCATAGCAGACAGACGGCTCGAGCGCGCGGAGACAGAGTCGCCTGCGGCTGCCGGGCAGGGACGCCCAGCGGCGGCGCCAACGTTCGAGGTGGCGAGGATGAAGTTGATACGAACCAAAGGCTCATCGGGAATGTCCCTCGCCGAGCGCTTCTCCTTGACGCTCTCGAGGAGCAGCCTCGTCGTCGGGCGGAGCTGCGTGGAGTTCGAGCCGGAGACCGTCCCGCTCCTGTCGACGCTCCGCGGTAAGCCTATTACCTTCCTTGGCCTTATGCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCCACCGTCCGCTGGCTCGACGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGCGAGGTGCCACTGGGAGTGGAGAAGGTCCACGAGCTCGCGCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTTAGGAAGCCCACTGGCGTCTCCGACGCCGACCTCCTCCCCGCCGGCTTCGAGGAGCGCACGCGCGGCCGCGGCGTCGTGGCGACGAGATGGGTTCCTCAGATGAGCATACTGGCGCACGCCGCCGTGGGCGCGTTCCTGACCCACTGCGGCTGGAACTCGACCATCGAGGGGCTCATGTTCGGCCACCCGCTTATCATGCTGCCGATCTTCGGCGACCAGGGACCGAACGCGCGGCTAATCGAGGCGAAGAACGCCGGATTGCAGGTGGCAAGAAACGACGGCGATGGATCGTTCGACCGAGAAGGCGTCGCGGCGGCGATTCGTGCAGTCGCGGTGGAGGAAGAAAGCAGCAAAGTGTTTCAAGCCAAAGCCAAGAAGCTGCAGGAGATCGTCGCGGACATGGCCTGCCATGAGAGGTACATCGACGGATTCATTCAGCAATTGAGATCTTACAAGGATTGAAGCATCTCAGGATGTACACCTGCAACAGTGCAACTACAAAATCCTTGGAATAAAATGATTTTTGTTTTGTAGTCCACTTACCCAAAATATGCAAAGGCCGAACGGTGGGGAAAATTCTAATCCTGATTTTTTTTTCATTTTTGTTTTTCTTTGTTATTTATCAATTTGATACCGCCCAGACAAAGTTGAAATTTAATTGTAAAACTTTTTATAGTAaaaaa        ]


>consensus_8075#0 TCAGGCGTCCGGGCGGTATTCATCGGTCGCGCCCGCACATCGACGCCCACGCCGCCGCAC GCTAAACCCGCCCGCTCGGCCGCTCCACGCGCGCACCGGCCCCCTTCTTCCGTCATGGAC TCCGGCTACTCCTCCTCCTACGCCGCCGCCGCCGGGATGCACGTCGTGATCTGCCCGTGG CTCGCCTTCGGCCACCTGCTCCCGTGCCTCGACCTCGCCCAGCGCCTCGCGTCGCGGGGC CACCGCGTGTCGTTCGTCTCCACGCCGCGGAACATATCCCGCCTCCCGCCGGTGCGCCCC GCGCTCGCGCCGCTCGTCGCCTTCGTGGCGCTGCCGCTCCCGCGCGTCGAGGGGCTCCCC GACGGCGCCGAGTCCACCAACGACGTCCCCCACGACAGGCCGGACATGGTCGAGCTCCAC CGGAGGGCCTTCGACGGGCTCGCCGCGCCCTTCTCGGAGTTCTTGGGCACCGCGTGCGCC GACTGGGTCATCGTCGACGTCTTCCACCACTGGGCCGCAGCCGCCGCTCTCGAGCACAAG GTGCCATGTGCAATGATGTTGTTGGGCTCTGCACATATGATCGCTTCCATAGCAGACAGA CGGCTCGAGCGCGCGGAGACAGAGTCGCCTGCGGCTGCCGGGCAGGGACGCCCAGCGGCG GCGCCAACGTTCGAGGTGGCGAGGATGAAGTTGATACGAACCAAAGGCTCATCGGGAATG TCCCTCGCCGAGCGCTTCTCCTTGACGCTCTCGAGGAGCAGCCTCGTCGTCGGGCGGAGC TGCGTGGAGTTCGAGCCGGAGACCGTCCCGCTCCTGTCGACGCTCCGCGGTAAGCCTATT ACCTTCCTTGGCCTTATGCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCC ACCGTCCGCTGGCTCGACGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGC GAGGTGCCACTGGGAGTGGAGAAGGTCCACGAGCTCGCGCTCGGGCTGGAGCTCGCCGGG ACGCGCTTCCTCTGGGCTCTTAGGAAGCCCACTGGCGTCTCCGACGCCGACCTCCTCCCC GCCGGCTTCGAGGAGCGCACGCGCGGCCGCGGCGTCGTGGCGACGAGATGGGTTCCTCAG ATGAGCATACTGGCGCACGCCGCCGTGGGCGCGTTCCTGACCCACTGCGGCTGGAACTCG ACCATCGAGGGGCTCATGTTCGGCCACCCGCTTATCATGCTGCCGATCTTCGGCGACCAG GGACCGAACGCGCGGCTAATCGAGGCGAAGAACGCCGGATTGCAGGTGGCAAGAAACGAC GGCGATGGATCGTTCGACCGAGAAGGCGTCGCGGCGGCGATTCGTGCAGTCGCGGTGGAG GAAGAAAGCAGCAAAGTGTTTCAAGCCAAAGCCAAGAAGCTGCAGGAGATCGTCGCGGAC ATGGCCTGCCATGAGAGGTACATCGACGGATTCATTCAGCAATTGAGATCTTACAAGGAT TGAAGCATCTCAGGATGTACACCTGCAACAGTGCAACTACAAAATCCTTGGAATAAAATG ATTTTTGTTTTGTAGTCCACTTACCCAAAATATGCAAAGGCCGAACGGTGGGGAAAATTC TAATCCTGATTTTTTTTTCATTTTTGTTTTTCTTTGTTATTTATCAATTTGATACCGCCC AGACAAAGTTGAAATTTAATTGTAAAACTTTTTATAGTACATGGAACACGCA



consensusID : consensus_8075#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1670
fasta sequence
                              [GCCCGATCGGAGCAAGCTTGGTAAACCTCCAAAGTATACAAAGTCCAAACCCACGGGCGGTACTGCCCATCGCATCATCAGGCGTCCGGGCGGTATTCATCGGTCGCGCCCGCACATCGACGCCCACGCCGCCGCACGCTAAACCCGCCCGCTCGGCCGCTCCACGCGCGCACCGGCCCCCTTCTTCCGTCATGGACTCCGGCTACTCCTCCTCCTACGCCGCCGCCGCCGGGATGCACGTCGTGATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCGTGCCTCGACCTCGCCCAGCGCCTCGCGTCGCGGGGCCACCGCGTGTCGTTCGTCTCCACGCCGCGGAACATATCCCGCCTCCCGCCGGTGCGCCCCGCGCTCGCGCCGCTCGTCGCCTTCGTGGCGCTGCCGCTCCCGCGCGTCGAGGGGCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCCACGACAGGCCGGACATGGTCGAGCTCCACCGGAGGGCCTTCGACGGGCTCGCCGCGCCCTTCTCGGAGTTCTTGGGCACCGCGTGCGCCGACTGGGTCATCGTCGACGTCTTCCACCACTGGGCCGCAGCCGCCGCTCTCGAGCACAAGGTTGCACCAAGTCCTACTAATAGCTCAATCTTTGCACTAACCTTAATTACATAATTCCATCATTGATGCTACGTTATTCGCCTTAGGTGCCATGTGCAATGATGTTGTTGGGCTCTGCACATATGATCGCTTCCATAGCAGACAGACGGCTCGAGCGCGCGGAGACAGAGTCGCCTGCGGCTGCCGGGCAGGGACGCCCAGCGGCGGCGCCAACGTTCGAGGTGGCGAGGATGAAGTTGATACGAACCAAAGGCTCATCGGGAATGTCCCTCGCCGAGCGCTTCTCCTTGACGCTCTCGAGGAGCAGCCTCGTCGTCGGGCGGAGCTGCGTGGAGTTCGAGCCGGAGACCGTCCCGCTCCTGTCGACGCTCCGCGGTAAGCCTATTACCTTCCTTGGCCTTATGCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCCACCGTCCGCTGGCTCGACGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGCGAGGTGCCACTGGGAGTGGAGAAGGTCCACGAGCTCGCGCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTTAGGAAGCCC-ACTGGCGTCTCCGACGCCGACCTCCTCCCCGCCGGCTTCGAGGAGCGCACGCGCGGCCGCGGCGTCGTGGCGACGAGATGGGTTCCTCAGATGAGCATACTGGCGCACGCCGCCGTGGGCGCGTTCCTGACCCACTGCGGCTGGAACTCGACCATCGAGGGGCTCATGTTCGGCCACCCGCTTATCATGCTGCCGATCTTCGGCGACCAGGGACCGAACGCGCGGCTAATCGAGGCGAAGAACGCCGGATTGCAGGTGGCAAGAAACGACGGCGATGGATCGTTCGACCGAGAAGGCGTCGCGGCGGCGATTCGTGCAGTCGCGGTGGAGGAAGAAAGCAGCAAAGTGTTTCAAGCCAAAGCCAAGAAGCTGCAGGAGATCGTCGCGGACATGGCCTGCCATGAGAGGTACATCGACGGATTCATTCAGCAATTGAGATCTTACAAGGATTGAAGCA]

[-] EMBL AK063307             [GCCCGATCGGAGCAAGCTTGGTAAACCTCCAAAGTATACAAAGTCCAAACCCACGGGCGGTACTGCCCATCGCATCATCAGGCGTCCGGGCGGTATTCATCGGTCGCGCCCGCACATCGACGCCCACGCCGCCGCACGCTAAACCCGCCCGCTCGGCCGCTCCACGCGCGCACCGGCCCCCTTCTTCCGTCATGGACTCCGGCTACTCCTCCTCCTACGCCGCCGCCGCCGGGATGCACGTCGTGATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCGTGCCTCGACCTCGCCCAGCGCCTCGCGTCGCGGGGCCACCGCGTGTCGTTCGTCTCCACGCCGCGGAACATATCCCGCCTCCCGCCGGTGCGCCCCGCGCTCGCGCCGCTCGTCGCCTTCGTGGCGCTGCCGCTCCCGCGCGTCGAGGGGCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCCACGACAGGCCGGACATGGTCGAGCTCCACCGGAGGGCCTTCGACGGGCTCGCCGCGCCCTTCTCGGAGTTCTTGGGCACCGCGTGCGCCGACTGGGTCATCGTCGACGTCTTCCACCACTGGGCCGCAGCCGCCGCTCTCGAGCACAAGGTTGCACCAAGTCCTACTAATAGCTCAATCTTTGCACTAACCTTAATTACATAATTCCATCATTGATGCTACGTTATTCGCCTTAGGTGCCATGTGCAATGATGTTGTTGGGCTCTGCACATATGATCGCTTCCATAGCAGACAGACGGCTCGAGCGCGCGGAGACAGAGTCGCCTGCGGCTGCCGGGCAGGGACGCCCAGCGGCGGCGCCAACGTTCGAGGTGGCGAGGATGAAGTTGATACGAACCAAAGGCTCATCGGGAATGTCCCTCGCCGAGCGCTTCTCCTTGACGCTCTCGAGGAGCAGCCTCGTCGTCGGGCGGAGCTGCGTGGAGTTCGAGCCGGAGACCGTCCCGCTCCTGTCGACGCTCCGCGGTAAGCCTATTACCTTCCTTGGCCTTATGCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCCACCGTCCGCTGGCTCGACGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGCGAGGTGCCACTGGGAGTGGAGAAGGTCCACGAGCTCGCGCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTTAGGAAGCCC ACTGGCGTCTCCGACGCCGACCTCCTCCCCGCCGGCTTCGAGGAGCGCACGCGCGGCCGCGGCGTCGTGGCGACGAGATGGGTTCCTCAGATGAGCATACTGGCGCACGCCGCCGTGGGCGCGTTCCTGACCCACTGCGGCTGGAACTCGACCATCGAGGGGCTCATGTTCGGCCACCCGCTTATCATGCTGCCGATCTTCGGCGACCAGGGACCGAACGCGCGGCTAATCGAGGCGAAGAACGCCGGATTGCAGGTGGCAAGAAACGACGGCGATGGATCGTTCGACCGAGAAGGCGTCGCGGCGGCGATTCGTGCAGTCGCGGTGGAGGAAGAAAGCAGCAAAGTGTTTCAAGCCAAAGCCAAGAAGCTGCAGGAGATCGTCGCGGACATGGCCTGCCATGAGAGGTACATCGACGGATTCATTCAGCAATTGAGATCTTACAAGGATTGAAGCA]
[+] EMBL AU093628             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCAGCCTCGTCGTCGGGCGGAGCTGCGTGGAGTTCGAGCCGGAGACCGTCCCGCTCCTGTCGA ANTCCGCGGTAAGCCTATTACCTTCCTTGGCCTTATGCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCCACCGTCCGCTGGCTCGACGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGCGAGGTGCCACTGGGAGTGGAGAAGGTCCNAGAGCTCGCGCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTTAGGAAGCCCTACT GC TCTCCGACGCCGACCTCCTCCCCGCCGGCTTCGAG                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_8075#1 GCCCGATCGGAGCAAGCTTGGTAAACCTCCAAAGTATACAAAGTCCAAACCCACGGGCGG TACTGCCCATCGCATCATCAGGCGTCCGGGCGGTATTCATCGGTCGCGCCCGCACATCGA CGCCCACGCCGCCGCACGCTAAACCCGCCCGCTCGGCCGCTCCACGCGCGCACCGGCCCC CTTCTTCCGTCATGGACTCCGGCTACTCCTCCTCCTACGCCGCCGCCGCCGGGATGCACG TCGTGATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCGTGCCTCGACCTCGCCCAGC GCCTCGCGTCGCGGGGCCACCGCGTGTCGTTCGTCTCCACGCCGCGGAACATATCCCGCC TCCCGCCGGTGCGCCCCGCGCTCGCGCCGCTCGTCGCCTTCGTGGCGCTGCCGCTCCCGC GCGTCGAGGGGCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCCACGACAGGCCGG ACATGGTCGAGCTCCACCGGAGGGCCTTCGACGGGCTCGCCGCGCCCTTCTCGGAGTTCT TGGGCACCGCGTGCGCCGACTGGGTCATCGTCGACGTCTTCCACCACTGGGCCGCAGCCG CCGCTCTCGAGCACAAGGTTGCACCAAGTCCTACTAATAGCTCAATCTTTGCACTAACCT TAATTACATAATTCCATCATTGATGCTACGTTATTCGCCTTAGGTGCCATGTGCAATGAT GTTGTTGGGCTCTGCACATATGATCGCTTCCATAGCAGACAGACGGCTCGAGCGCGCGGA GACAGAGTCGCCTGCGGCTGCCGGGCAGGGACGCCCAGCGGCGGCGCCAACGTTCGAGGT GGCGAGGATGAAGTTGATACGAACCAAAGGCTCATCGGGAATGTCCCTCGCCGAGCGCTT CTCCTTGACGCTCTCGAGGAGCAGCCTCGTCGTCGGGCGGAGCTGCGTGGAGTTCGAGCC GGAGACCGTCCCGCTCCTGTCGACGCTCCGCGGTAAGCCTATTACCTTCCTTGGCCTTAT GCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCCACCGTCCGCTGGCTCGA CGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGCGAGGTGCCACTGGGAGT GGAGAAGGTCCACGAGCTCGCGCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGC TCTTAGGAAGCCCACTGGCGTCTCCGACGCCGACCTCCTCCCCGCCGGCTTCGAGGAGCG CACGCGCGGCCGCGGCGTCGTGGCGACGAGATGGGTTCCTCAGATGAGCATACTGGCGCA CGCCGCCGTGGGCGCGTTCCTGACCCACTGCGGCTGGAACTCGACCATCGAGGGGCTCAT GTTCGGCCACCCGCTTATCATGCTGCCGATCTTCGGCGACCAGGGACCGAACGCGCGGCT AATCGAGGCGAAGAACGCCGGATTGCAGGTGGCAAGAAACGACGGCGATGGATCGTTCGA CCGAGAAGGCGTCGCGGCGGCGATTCGTGCAGTCGCGGTGGAGGAAGAAAGCAGCAAAGT GTTTCAAGCCAAAGCCAAGAAGCTGCAGGAGATCGTCGCGGACATGGCCTGCCATGAGAG GTACATCGACGGATTCATTCAGCAATTGAGATCTTACAAGGATTGAAGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8075#0      ------------------------------------------------------------
consensus_8075#1      GCCCGATCGGAGCAAGCTTGGTAAACCTCCAAAGTATACAAAGTCCAAACCCACGGGCGG 60
                                                                                  

consensus_8075#0      -----------------TCAGGCGTCCGGGCGGTATTCATCGGTCGCGCCCGCACATCGA 43
consensus_8075#1      TACTGCCCATCGCATCATCAGGCGTCCGGGCGGTATTCATCGGTCGCGCCCGCACATCGA 120
                                       *******************************************

consensus_8075#0      CGCCCACGCCGCCGCACGCTAAACCCGCCCGCTCGGCCGCTCCACGCGCGCACCGGCCCC 103
consensus_8075#1      CGCCCACGCCGCCGCACGCTAAACCCGCCCGCTCGGCCGCTCCACGCGCGCACCGGCCCC 180
                      ************************************************************

consensus_8075#0      CTTCTTCCGTCATGGACTCCGGCTACTCCTCCTCCTACGCCGCCGCCGCCGGGATGCACG 163
consensus_8075#1      CTTCTTCCGTCATGGACTCCGGCTACTCCTCCTCCTACGCCGCCGCCGCCGGGATGCACG 240
                      ************************************************************

consensus_8075#0      TCGTGATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCGTGCCTCGACCTCGCCCAGC 223
consensus_8075#1      TCGTGATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCGTGCCTCGACCTCGCCCAGC 300
                      ************************************************************

consensus_8075#0      GCCTCGCGTCGCGGGGCCACCGCGTGTCGTTCGTCTCCACGCCGCGGAACATATCCCGCC 283
consensus_8075#1      GCCTCGCGTCGCGGGGCCACCGCGTGTCGTTCGTCTCCACGCCGCGGAACATATCCCGCC 360
                      ************************************************************

consensus_8075#0      TCCCGCCGGTGCGCCCCGCGCTCGCGCCGCTCGTCGCCTTCGTGGCGCTGCCGCTCCCGC 343
consensus_8075#1      TCCCGCCGGTGCGCCCCGCGCTCGCGCCGCTCGTCGCCTTCGTGGCGCTGCCGCTCCCGC 420
                      ************************************************************

consensus_8075#0      GCGTCGAGGGGCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCCACGACAGGCCGG 403
consensus_8075#1      GCGTCGAGGGGCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCCACGACAGGCCGG 480
                      ************************************************************

consensus_8075#0      ACATGGTCGAGCTCCACCGGAGGGCCTTCGACGGGCTCGCCGCGCCCTTCTCGGAGTTCT 463
consensus_8075#1      ACATGGTCGAGCTCCACCGGAGGGCCTTCGACGGGCTCGCCGCGCCCTTCTCGGAGTTCT 540
                      ************************************************************

consensus_8075#0      TGGGCACCGCGTGCGCCGACTGGGTCATCGTCGACGTCTTCCACCACTGGGCCGCAGCCG 523
consensus_8075#1      TGGGCACCGCGTGCGCCGACTGGGTCATCGTCGACGTCTTCCACCACTGGGCCGCAGCCG 600
                      ************************************************************

consensus_8075#0      CCGCTCTCGAGCACAAGGT----------------------------------------- 542
consensus_8075#1      CCGCTCTCGAGCACAAGGTTGCACCAAGTCCTACTAATAGCTCAATCTTTGCACTAACCT 660
                      *******************                                         

consensus_8075#0      ---------------------------------------------GCCATGTGCAATGAT 557
consensus_8075#1      TAATTACATAATTCCATCATTGATGCTACGTTATTCGCCTTAGGTGCCATGTGCAATGAT 720
                                                                   ***************

consensus_8075#0      GTTGTTGGGCTCTGCACATATGATCGCTTCCATAGCAGACAGACGGCTCGAGCGCGCGGA 617
consensus_8075#1      GTTGTTGGGCTCTGCACATATGATCGCTTCCATAGCAGACAGACGGCTCGAGCGCGCGGA 780
                      ************************************************************

consensus_8075#0      GACAGAGTCGCCTGCGGCTGCCGGGCAGGGACGCCCAGCGGCGGCGCCAACGTTCGAGGT 677
consensus_8075#1      GACAGAGTCGCCTGCGGCTGCCGGGCAGGGACGCCCAGCGGCGGCGCCAACGTTCGAGGT 840
                      ************************************************************

consensus_8075#0      GGCGAGGATGAAGTTGATACGAACCAAAGGCTCATCGGGAATGTCCCTCGCCGAGCGCTT 737
consensus_8075#1      GGCGAGGATGAAGTTGATACGAACCAAAGGCTCATCGGGAATGTCCCTCGCCGAGCGCTT 900
                      ************************************************************

consensus_8075#0      CTCCTTGACGCTCTCGAGGAGCAGCCTCGTCGTCGGGCGGAGCTGCGTGGAGTTCGAGCC 797
consensus_8075#1      CTCCTTGACGCTCTCGAGGAGCAGCCTCGTCGTCGGGCGGAGCTGCGTGGAGTTCGAGCC 960
                      ************************************************************

consensus_8075#0      GGAGACCGTCCCGCTCCTGTCGACGCTCCGCGGTAAGCCTATTACCTTCCTTGGCCTTAT 857
consensus_8075#1      GGAGACCGTCCCGCTCCTGTCGACGCTCCGCGGTAAGCCTATTACCTTCCTTGGCCTTAT 1020
                      ************************************************************

consensus_8075#0      GCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCCACCGTCCGCTGGCTCGA 917
consensus_8075#1      GCCGCCGTTGCATGAAGGCCGCCGCGAGGACGGCGAGGATGCCACCGTCCGCTGGCTCGA 1080
                      ************************************************************

consensus_8075#0      CGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGCGAGGTGCCACTGGGAGT 977
consensus_8075#1      CGCGCAGCCGGCCAAGTCCGTCGTGTACGTCGCGCTAGGCAGCGAGGTGCCACTGGGAGT 1140
                      ************************************************************

consensus_8075#0      GGAGAAGGTCCACGAGCTCGCGCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGC 1037
consensus_8075#1      GGAGAAGGTCCACGAGCTCGCGCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGC 1200
                      ************************************************************

consensus_8075#0      TCTTAGGAAGCCCACTGGCGTCTCCGACGCCGACCTCCTCCCCGCCGGCTTCGAGGAGCG 1097
consensus_8075#1      TCTTAGGAAGCCCACTGGCGTCTCCGACGCCGACCTCCTCCCCGCCGGCTTCGAGGAGCG 1260
                      ************************************************************

consensus_8075#0      CACGCGCGGCCGCGGCGTCGTGGCGACGAGATGGGTTCCTCAGATGAGCATACTGGCGCA 1157
consensus_8075#1      CACGCGCGGCCGCGGCGTCGTGGCGACGAGATGGGTTCCTCAGATGAGCATACTGGCGCA 1320
                      ************************************************************

consensus_8075#0      CGCCGCCGTGGGCGCGTTCCTGACCCACTGCGGCTGGAACTCGACCATCGAGGGGCTCAT 1217
consensus_8075#1      CGCCGCCGTGGGCGCGTTCCTGACCCACTGCGGCTGGAACTCGACCATCGAGGGGCTCAT 1380
                      ************************************************************

consensus_8075#0      GTTCGGCCACCCGCTTATCATGCTGCCGATCTTCGGCGACCAGGGACCGAACGCGCGGCT 1277
consensus_8075#1      GTTCGGCCACCCGCTTATCATGCTGCCGATCTTCGGCGACCAGGGACCGAACGCGCGGCT 1440
                      ************************************************************

consensus_8075#0      AATCGAGGCGAAGAACGCCGGATTGCAGGTGGCAAGAAACGACGGCGATGGATCGTTCGA 1337
consensus_8075#1      AATCGAGGCGAAGAACGCCGGATTGCAGGTGGCAAGAAACGACGGCGATGGATCGTTCGA 1500
                      ************************************************************

consensus_8075#0      CCGAGAAGGCGTCGCGGCGGCGATTCGTGCAGTCGCGGTGGAGGAAGAAAGCAGCAAAGT 1397
consensus_8075#1      CCGAGAAGGCGTCGCGGCGGCGATTCGTGCAGTCGCGGTGGAGGAAGAAAGCAGCAAAGT 1560
                      ************************************************************

consensus_8075#0      GTTTCAAGCCAAAGCCAAGAAGCTGCAGGAGATCGTCGCGGACATGGCCTGCCATGAGAG 1457
consensus_8075#1      GTTTCAAGCCAAAGCCAAGAAGCTGCAGGAGATCGTCGCGGACATGGCCTGCCATGAGAG 1620
                      ************************************************************

consensus_8075#0      GTACATCGACGGATTCATTCAGCAATTGAGATCTTACAAGGATTGAAGCATCTCAGGATG 1517
consensus_8075#1      GTACATCGACGGATTCATTCAGCAATTGAGATCTTACAAGGATTGAAGCA---------- 1670
                      **************************************************          

consensus_8075#0      TACACCTGCAACAGTGCAACTACAAAATCCTTGGAATAAAATGATTTTTGTTTTGTAGTC 1577
consensus_8075#1      ------------------------------------------------------------
                                                                                  

consensus_8075#0      CACTTACCCAAAATATGCAAAGGCCGAACGGTGGGGAAAATTCTAATCCTGATTTTTTTT 1637
consensus_8075#1      ------------------------------------------------------------
                                                                                  

consensus_8075#0      TCATTTTTGTTTTTCTTTGTTATTTATCAATTTGATACCGCCCAGACAAAGTTGAAATTT 1697
consensus_8075#1      ------------------------------------------------------------
                                                                                  

consensus_8075#0      AATTGTAAAACTTTTTATAGTACATGGAACACGCA 1732
consensus_8075#1      -----------------------------------
                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)