These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8080#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2298 fasta sequence [CCACACGCAGCCGCCGGCGCCCGTCGAAATGCTGGCCAGGCCTGGGCGGCTCGCCGCTTCCACCCTTCCCAACGATTCCGCCGCCGCCGCCGCATCCACCGTCCTCTCCATACTCCGCGGCGAGGACCCCGCCAGCCTCCCCGCGGCCGGCATCGACCCGTGCCCCGCCGTGTTCCAGCAACTCCGCCCGTCGCTGCCCACCGTCCCGGACTCCGCGCTCCCGGCGCTGGCCCGATGGGCGGGCGAAGCCACCGCCGTCTCCCTCCTGACGTCCCGCGGCCTCTTTGCTGCCGCCTGGCGCCTCCTCCTGGCCCCTTCCCCCACGCCTCCTCCCCTCGCCGCCTTCGCCCCGCTCGTCCGACGCTACGCCCGCCTCGGCCGCGCCCCCGCCGCCCTCCGCGCCTTCCAGTTCCTCCGCCGCCACCCCGACCGCTACATGGCCGGCGGCGACATCCCTGCCGCGGCGTCCCTGCTAAACATGGCGGTCGACGCGCTCTGCAAGGAGGGCCACCCGCGCGCGGCCGTGGAGCTCTTCGAGCGGTGGCGCCGCGAGGAGCCCGACTCGCCACCAGATGAGCGGGCTTACAATATCCTTCTCCACGGCTGGAGCCGCGCCGGCAGGCTCGACAAGGTGGGGAAACTCTGGGCCGAGATGCGCCTCGCCGGGGTGCGCCCGACGGTGGTCACGTATGGGACTCTCATCGAGGGGCTCTGCGTGAAGCGCAGGCCAGACCAGGCGATTGCGCTTCTTGACGAGATGCGGGAAGAAGGGATCGAGGCCAATCTGCTTACTTGCAACCCCATTGTGTACGCTCTTGCGCAGGCCGGCCGATTCCAGGACGCCCACAAGGTGCTCGAGAAATTTCCTCTGTACGGTGTCGCGCCCAACATTTCCACCTTCAACTCGCTCGTGATGGGCTATTGCAAGCATGGGGACCTTGCTGGGGCTAGCAGTGTGCTCAAGGTGATGACAGAACGGGGCATTTCGCCGACCACAAGGACATACAATTATTTCTTCATGACCTTTGCCAAGAACAGCGATGTTGAGTCAGGGATGAATTTTTATAGCAAAATGATCGGTAATGGCTATTCACCAGATCAGCTTACTTATGTCCTCTTGGTCAAGATGTTGTCCAGGGCGAACCGGCTTGAACTTGTGGTGCAAATGATACAGGAGATGAGAACTCATGGTTTTGAGCCAGATTTGGCGACGAGTACCATGCTGATACATTTGCTTTGCCGGCGTCATCAATTTGAGGAGGCATGTGCTGAGTTTGAGGATATGTTTAAGAGAGGAATTGTGCCCCAGTACATCACTTACCAGAAGCTTATGAGAGAGCTCAAGCGACTTGGTTTGGTTCATCTGATCCAAAAGTTGACAAATTTAATGCGCTCAGTGCCACATTCTACAAAGTTACCAGGCAGCTATAGGGATAAGGAAGGGGATGACTCCATGGAAAAGAGGAAATTGATATTGCAGAAAGCACAGGCTGTTTCAGATGTTTTGAAGGAGTGTAAAGATCCAAAGGAGTTGGGCAAGCTCAAAGAAGATGAAGA-GACTGATGTTGAGGTCGCAGATAGGTTAGTAGCCAACATTAGAAGAAGTGTATATGGGGGTGCCTCAACGAGCTCTGTAATGGCACCTCTTTCTTGAATATGGAGTTGCAAAAATGAAAATCATAAAGATAAGGGACATGATTGCATGTGAGGGGATTTACTGATAGATTGCATTGTTCATCTCAGAAGTTGACCACCTAAATGATTCGTGCACATGTTTACTGTTGTTGTTTGGGCCCTTCAAGATAAAAGATAACAGAGAAGAGGTAGTGACATACTACTGTGGTTGTGGTTTACTGGATATTGTCCCATGAAGGAATTAGCTGGTTGATGTGTTTCTTGTTTTAGGGAAACATTGATATGGCAGTTATTTACTGATGTGCTCATCTGCAGATGTCTTGGATTGCTATGAGACCTGTGTATGCCTCATGCAGTGATATTGCATTGAATCAGGCAACTCAGGAAAAGATGATGCCTCATTCGAAGTCTAACCAGTGAACATAGAATTGGTAGGACATTATTTAGCATGCGGCAGCCCTTGGGTTTGGCCGCTTGTGCAACTCATATACACAAAATTTTCCATTGTGTAAAGAATTTTCCGTTGCTTTGTTGGTCGGATACTGCTTCAGATGCTGTTGTTAAATTGAGATCATTTAGAAATCCCATTTCCTGTTAAACAAATACAATTAAACTTTGACTCTCCATTTCCTTTA-GTT-TAGAAAGTCTTGAAATAAATTGCTC] [+] EMBL AK102377 [CCACACGCAGCCGCCGGCGCCCGTCGAAATGCTGGCCAGGCCTGGGCGGCTCGCCGCTTCCACCCTTCCCAACGATTCCGCCGCCGCCGCCGCATCCACCGTCCTCTCCATACTCCGCGGCGAGGACCCCGCCAGCCTCCCCGCGGCCGGCATCGACCCGTGCCCCGCCGTGTTCCAGCAACTCCGCCCGTCGCTGCCCACCGTCCCGGACTCCGCGCTCCCGGCGCTGGCCCGATGGGCGGGCGAAGCCACCGCCGTCTCCCTCCTGACGTCCCGCGGCCTCTTTGCTGCCGCCTGGCGCCTCCTCCTGGCCCCTTCCCCCACGCCTCCTCCCCTCGCCGCCTTCGCCCCGCTCGTCCGACGCTACGCCCGCCTCGGCCGCGCCCCCGCCGCCCTCCGCGCCTTCCAGTTCCTCCGCCGCCACCCCGACCGCTACATGGCCGGCGGCGACATCCCTGCCGCGGCGTCCCTGCTAAACATGGCGGTCGACGCGCTCTGCAAGGAGGGCCACCCGCGCGCGGCCGTGGAGCTCTTCGAGCGGTGGCGCCGCGAGGAGCCCGACTCGCCACCAGATGAGCGGGCTTACAATATCCTTCTCCACGGCTGGAGCCGCGCCGGCAGGCTCGACAAGGTGGGGAAACTCTGGGCCGAGATGCGCCTCGCCGGGGTGCGCCCGACGGTGGTCACGTATGGGACTCTCATCGAGGGGCTCTGCGTGAAGCGCAGGCCAGACCAGGCGATTGCGCTTCTTGACGAGATGCGGGAAGAAGGGATCGAGGCCAATCTGCTTACTTGCAACCCCATTGTGTACGCTCTTGCGCAGGCCGGCCGATTCCAGGACGCCCACAAGGTGCTCGAGAAATTTCCTCTGTACGGTGTCGCGCCCAACATTTCCACCTTCAACTCGCTCGTGATGGGCTATTGCAAGCATGGGGACCTTGCTGGGGCTAGCAGTGTGCTCAAGGTGATGACAGAACGGGGCATTTCGCCGACCACAAGGACATACAATTATTTCTTCATGACCTTTGCCAAGAACAGCGATGTTGAGTCAGGGATGAATTTTTATAGCAAAATGATCGGTAATGGCTATTCACCAGATCAGCTTACTTATGTCCTCTTGGTCAAGATGTTGTCCAGGGCGAACCGGCTTGAACTTGTGGTGCAAATGATACAGGAGATGAGAACTCATGGTTTTGAGCCAGATTTGGCGACGAGTACCATGCTGATACATTTGCTTTGCCGGCGTCATCAATTTGAGGAGGCATGTGCTGAGTTTGAGGATATGTTTAAGAGAGGAATTGTGCCCCAGTACATCACTTACCAGAAGCTTATGAGAGAGCTCAAGCGACTTGGTTTGGTTCATCTGATCCAAAAGTTGACAAATTTAATGCGCTCAGTGCCACATTCTACAAAGTTACCAGGCAGCTATAGGGATAAGGAAGGGGATGACTCCATGGAAAAGAGGAAATTGATATTGCAGAAAGCACAGGCTGTTTCAGATGTTTTGAAGGAGTGTAAAGATCCAAAGGAGTTGGGCAAGCTCAAAGAAGATGAAGA GACTGATGTTGAGGTCGCAGATAGGTTAGTAGCCAACATTAGAAGAAGTGTATATGGGGGTGCCTCAACGAGCTCTGTAATGGCACCTCTTTCTTGAATATGGAGTTGCAAAAATGAAAATCATAAAGATAAGGGACATGATTGCATGTGAGGGGATTTACTGATAGATTGCATTGTTCATCTCAGAAGTTGACCACCTAAATGATTCGTGCACATGTTTACTGTTGTTGTTTGGGCCCTTCAAGATAAAAGATAACAGAGAAGAGGTAGTGACATACTACTGTGGTTGTGGTTTACTGGATATTGTCCCATGAAGGAATTAGCTGGTTGATGTGTTTCTTGTTTTAGGGAAACATTGATATGGCAGTTATTTACTGATGTGCTCATCTGCAGATGTCTTGGATTGCTATGAGACCTGTGTATGCCTCATGCAGTGATATTGCATTGAATCAGGCAACTCAGGAAAAGATGATGCCTCATTCGAAGTCTAACCAGTGAACATAGAATTGGTAGGACATTATTTAGCATGTGGCAGCCCTTGGGTTTGGCCGCTTGTGCAACTCATATACACAAAATTTTCCATTGTGTAAAGAATTTTCCGTTGCTTTGTTGGTCGGATACTTCTTCAGATGCTGTTGTTAAATTGAGATCATTTAGAAATCCCATTTCCTGTTA ] [+] EMBL AK109825 [ CACACGCAGCCGCCGGCGCCCGTCGAAATGCTGGCCAGGCCTGGGCGGCTCGCCGCTTCCACCCTTCCCAACGATTCCGCCGCCGCCGCCGCATCCACCGTCCTCTCCATACTCCGCGGCGAGGACCCCGCCAGCCTCCCCGCGGCCGGCATCGACCCGTGCCCCGCCGTGTTCCAGCAACTCCGCCCGTCGCTGCCCACCGTCCCGGACTCCGCGCTCCCGGCGCTGGCCCGATGGGCGGGCGAAGCCACCGCCGTCTCCCTCCTGACGTCCCGCGGCCTTTTTGCTGCCGCCTGGCGCCTCCTCCTGGCCCCTTCCCCCACGCCTCCTCCCCTCGCCGCCTTCGCCCCGCTCGTCCGACGCTACGCCCGCCTCGGCCGCGCCCCCGCCGCCCTCCGCGCCTTCCAGTTCCTCCGCCGCCACCCCGACCGCTACATGGCCGGCGGCGACATCCCTGCCGCGGCGTCCCTGCTAAACATGGCGGTCGACGCGCTCTGCAAGGAGGGCCACCCGCGCGCGGCCGTGGAGCTCTTCGAGCGGTGGCGCCGCGAGGAGCCCGACTCGCCACCAGATGAGCGGGCTTACAATATCCTTCTCCACGGCTGGAGCCGCGCCGGCAGGCTCGACAAGGTGGGGAAACTCTGGGCCGAGATGCGCCTCGCCGGGGTGCGCCCGACGGTGGTCACGTATGGGACTCTCATCGAGGGGCTCTGCGTGAAGCGCAGGCCAGACCAGGCGATTGCGCTTCTTGACGAGATGCGGGAAGAAGGGATCGAGGCCAATCTGCTTACTTGCAACCCCATTGTGTACGCTCTTGCGCAGGCCGGCCGATTCCAGGACGCCCACAAGGTGCTCGAGAAATTTCCTCTGTACGGTGTCGCGCCCAACATTTCCACCTTCAACTCGCTCGTGATGGGCTATTGCAAGCATGGGGACCTTGCTGGGGCTAGCAGTGTGCTCAAGGT TGACAGAACGGGGCATTTCGCCGACCACAAGGACATACAATTATTTCTTCATGACCTTTGCCAAGAACAGCGATGTTGAGTCAGGGATGAATTTTTATAGCAAAATGATCGGTAATGGCTATTCACCAGATCAGCTTACTTATGTCCTCTTGGTCAAGATGTTGTCCAGGGCGAACCGGCTTGAACTTGTGGTGCAAATGATACAGGAGATGAGAACTCATGGTTTTGAGCCAGATTTGGCGACGAGTACCATGCTGATACATTTGCTTTGCCGGCGTCATCAATTTGAGGAGGCATGTGCTGAGTTTGAGGATATGTTTAAGAGAGGAATTGTGCCCCAGTACATCACTTACCAGAAGCTTATGAGAGAGCTCAAGCGACTTGGTTTGGTTCATCTGATCCAAAAGTTGACAAATTTAATGCGCTCAGTGCCACATTCTACAAAGTTACCAGGCAGCTATAGGGATAAGGAAGGGGATGACTCCATGGAAAAGAGGAAATTGATATTGCAGAAAGCACAGGCTGTTTCAGATGTTTTGAAGGAGTGTAAAGATCCAAAGGAGTTGGGCAAGCTCAAAGAAGATGAAGA GACTGATGTTGAGGTCGCAGATAGGTTAGTAGCCAACATTAGAAGAAGTGTATATGGGGGTGCCTCAACGAGCTCTGTAATGGCACCTCTTTCTTGAATATGGAGTTGCAAAAATGAAAATCATAAAGATAAGGGACATGATTGCATGTGAGGGGATTTACTGATAGATTGCAT ] [+] EMBL CB621388 [ AGCGGTGGCGCCGCGAGGAGCCCGACTCGCCACCAGATGAGCGGGCTTACAATATCCTTCTCCACGGCTGGAGCCGCGCCGGCAGGCTCGACAAGGTGGGGAAACTCTGGGCCGAGATGCGCCTCGCCGGGGTGCGCCCGACGGTGGTCACGTATGGGACTCTCATCGAGGGGCTCTGCGTGAAGCGCAGGCCAGACCAGGCGATTGCGCTTCTTGACGAGATGCGGGAAGAAGGGATCGAGGCCAATCTGCTTACTTGCAACCCCATTGTGTACGCTCTTGCGCAGGCCGGCCGATTCCAGGACGCCCACAAGGTGCTCGAGAAATTTCCTCTGTACGGTGTCGCGCCCAACATTTCCACCTTCAACTCGCTCGTGATGGGCTATTGCAAGCATGGGGACCTTGCTGGGGCTAGCAGTGTGCTCAAGGTGATGACAGAACGGGGCATTTCGCCGACCACAAGGACATACAATTATTTCTTCATGACCTTTGCCAAGAACAGCGATGTTGAGTCAGGGATGAATTTTTATAGCAAAATGATCGGTAATGGCTATTCACCAGATCAACTTACTTATGTCCTCTTGGTCAAGATGTTATCCAGGGCGAACCGGCTTGAACTTGTGGTGCAAATGATACAGGAGATGAGAACTCATGGTTTTGAGCCAGATTTGGCGACGAGTACCATGCTGATACATTTGCTTTGCCGGCGTCATCAATTTGAGGAGGCATGTGCTGAGTTTGAGGATATGTTTAAGAGAGGAATTGTGCCCCAGT ] [-] EMBL CB621389 [ AAAGAAGATGAAGAGGACTGATGTTGAGGTCGCAGATAGGTTAGTAGCCAACATTAGAAGAAGTGTATATGGGGTTGCCTCAACGAGCTCTGTATTGGCACCTCTTTCTTGAATATGGAGTTGCAAAAATGAAAATCATAAAGATAAGGGACATGATTGCATGTGAGGGGATTTACTGATAGATTGCATTGTTCATCTCAGAAGTTGACCACCTAAATGATTCGTGCACATGTTTACTGTTGTTGTTTGGGCCCTTCAAGATAAAAGATAACAGAGAAGAGGTAGTGACATACTACTGTGGTTGTGGTTTACTGGATATTGTCCCATGAAGGAATTAGCTGGTTGATGTGTTTCTTGTTTTAGGGAAACATTGATATGGCAGTTATTTACTGATGTGCTCATCTGCAGATGTCTTGGATTGCTATGAGACCTGTGTATGCCTCATGCAGTGATATTGCATTGAATCAGGCAACTCAGGAAAAGATGATGCCTCATTCGAAGTCTAACCAGTGAACATAGAATTGGTAGGACATTATTTAGCATGCGGCAGCCCTTGGGTTTGGCCGCTTGTGCAACTCATATACACAAAATTTTCCATTGTGTAAAGAATTTTCCGTTGCTTTGTTGGTCGGATACTGCTTCAGATGCTGTTGTTAAATTGAGATCATTTAGAAATCCCATTTCCTGTTAAACAAATACAATTAAACTTTGACTCTCCATTTCCTTTA GTTCTAGAAAGTCTTGAAATAAAT ] [-] EMBL CB619565 [ GAAGA GACTGATGTTGAGGTCGCAGATAGGTTAGTAGCCAACATTAGAAGAAGTGTATATGGGGTTGCCTCAACGAGCTCTGTATTGGCACCTCTTTCTTGAATATGGAGTTGCAAAAATGAAAATCATAAAGATAAGGGACATGATTGCATGTGAGGGGATTTACTGATAGATTGCATTGTTCATCTCAGAAGTTGACCACCTAAATGATTCGTGCACATGTTTACTGTTGTTGTTTGGGCCCTTCAAGATAAAAGATAACAGAGAAGAGGTAGTGACATACTACTGTGGTTGTGGTTTACTGGATATTGTCCCATGAAGGAATTAGCTGGTTGATGTGTTTCTTGTTTTAGGGAAACATTGATATGGCAGTTATTTACTGATGTGCTCATCTGCAGATGTCTTGGATTGCTATGAGACCTGTGTATGCCTCATGCAGTGATATTGCATTGAATCAGGCAACTCAGGAAAAGATGATGCCTCATTCGAAGTCTAACCAGTGAACATAGAATTGGTAGGACATTATTTAGCATGCGGCAGCCCTTGGGTTTGGCCGCTTGTGCAACTCATATACACAAAATTTTCCATTGTGTAAAGAATTTTCCGTTGCTTTGTTGGTCGGATACTGCTTCAGATGCTGTTGTTAAATTGAGATCATTTAGAAATCCCATTTCCTGTTAAACAAATACAATTAAACTTTGACTCTCCATTTCCTTTATGTT AAGGGAATCTTGAAATAAATTGCTC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||