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Oryza sativa
cluster # 8110 cluster # 8110       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8110#0 length = 1461 sequences # 2  
consensus_8110#1 length = 872 sequences # 2  
consensus_8110#2 length = 833 sequences # 1  

consensusID : consensus_8110#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1461
fasta sequence
                              [GAAACCCTCAAAATCCCCTCGCCGTTGCCTCCCTCCTCTCCTCCCGCTGGCGACGGGATACACCGTGGTCACCTCTCGCCGACCACCATCCACCGCCGCGCGCCATGACCGCCTCCTCGCTCGCCGCCGCCGCCTCCGACGGGGCCTCCTCAAGCTCAGGGTCCGCCTCCGCCATCGTCGCCGGCACGGTGAACGGCCACCACGTGCTCAAGATCGTCGGGTACTCCTTCACCAAGGCCGTCCCCAGTGGCAAGAGCATCAGGTCTCGGCCGTTCCGCGCAGGAGGCCACACCTGGCACGTGCTGTACTACCCCAATGGGAATCGAGCCGAGAAAGCCGATTTCGTGGCCTTCTACCTCTGCCTCGATGACGCCGAGGCCTGCAGCGAGGCCGTGGAGGCGAAGGCCATCTTCAGTTTACTCGACATGGAGGGGAATCCGGTATCGTCCTACAGATTCACCACCAGGGTGGTCAACTTCATGGAGCATAAGAAGGATTTCCACACGGAGGAGGAGACGCCGCTCATCGTGGCGCCGCCGTCAGACATGCGCCGGCAATTCGGTGATCTTCTGCTGAGCAAACAAGGCGCGGATGTCAAGTTCCAGGTGGGCAAGAAGAAGTTCGACGCGCACCGATCGGTGCTCGCGGCGCGCTCTCCGGTCTTCAAGGCGCAGCTCTATGGCAGGATGAGGGAGAGTACCACCAGAGGTGCCATAAGAATCGATGACATGGAGGAAGAAGTGTTCAGGGCTATGCTAACCTTTGTTTACACGGACGATTTGCCTGAGATGAAGCAGCAAGACGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTGACAGGTACAATCTGGAGAGGATGAAGCTGATTTGTGAACATAATTTGTCTAAGCACATTGACACGGACTCCGTGGTGAACATTTTGGTACTAGCTGAGCAGCACAGCTGCCACATGCTTAAGGAAGCATGCTTGAAGTTCCTCAGGTCGTCAAGATCTCTGAAGGCCGTCATGGAAACTAATGGGTTTGGGCACTTAATCAGTAGCTGCCCAGGTCTTATTAAGGATATAATGTCCAAGCTTTCTCCTTGTTAACTTGGGAGAATCAAATCAAGGGCATATATAGGGATGAGTCTTCAGTCATGGCAATTGCATTTGTCTATAAGTTAAACTTAGTGCCCCGCTATTATCAAATTTAATAGCACTAGATATATTTAATCTTATACTTCGGTCGATGCAATGTATTAGTACACTTACAAATTATAGGCATTTAAGTTCACTGGAATGTCTGTCGAGCTTCTTCACTGTTCACAGAATTCCTCTTAGAATGGAAAACCTTATTCAGCTGTTCTGTTTGTACGTATCTCTTCCATGTGGAGATTCTGAGCGCTTAGCAGGTTCAGATAAATCTTGTCTTTGAATGCTGGATTTGGAAGTTGTGTTTTATCCATTGGCGTAGAAT]

[+] EMBL AK107342             [GAAACCCTCAAAATCCCCTCGCCGTTGCCTCCCTCCTCTCCTCCCGCTGGCGACGGGATACACCGTGGTCACCTCTCGCCGACCACCATCCACCGCCGCGCGCCATGACCGCCTCCTCGCTCGCCGCCGCCGCCTCCGACGGGGCCTCCTCAAGCTCAGGGTCCGCCTCCGCCATCGTCGCCGGCACGGTGAACGGCCACCACGTGCTCAAGATCGTCGGGTACTCCTTCACCAAGGCCGTCCCCAGTGGCAAGAGCATCAGGTCTCGGCCGTTCCGCGCAGGAGGCCACACCTGGCACGTGCTGTACTACCCCAATGGGAATCGAGCCGAGAAAGCCGATTTCGTGGCCTTCTACCTCTGCCTCGATGACGCCGAGGCCTGCAGCGAGGCCGTGGAGGCGAAGGCCATCTTCAGTTTACTCGACATGGAGGGGAATCCGGTATCGTCCTACAGATTCACCACCAGGGTGGTCAACTTCATGGAGCATAAGAAGGATTTCCACACGGAGGAGGAGACGCCGCTCATCGTGGCGCCGCCGTCAGACATGCGCCGGCAATTCGGTGATCTTCTGCTGAGCAAACAAGGCGCGGATGTCAAGTTCCAGGTGGGCAAGAAGAAGTTCGACGCGCACCGATCGGTGCTCGCGGCGCGCTCTCCGGTCTTCAAGGCGCAGCTCTATGGCAGGATGAGGGAGAGTACCACCAGAGGTGCCATAAGAATCGATGACATGGAGGAAGAAGTGTTCAGGGCTATGCTAACCTTTGTTTACACGGACGATTTGCCTGAGATGAAGCAGCAAGACGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTGACAGGTACAATCTGGAGAGGATGAAGCTGATTTGTGAACATAATTTGTCTAAGCACATTGACACGGACTCCGTGGTGAACATTTTGGTACTAGCTGAGCAGCACAGCTGCCACATGCTTAAGGAAGCATGCTTGAAGTTCCTCAGGTCGTCAAGATCTCTGAAGGCCGTCATGGAAACTAATGGGTTTGGGCACTTAATCAGTAGCTGCCCAGGTCTTATTAAGGATATAATGTCCAAGCTTTCTCCTTGTTAACTTGGGAGAATCAAATCAAGGGCATATATAGGGATGAGTCTTCAGTCATGGCAATTGCATTTGTCTATAAGTTAAACTTAGTGCCCCGCTATTATCAAATTTAATAGCACTAGATATATTTAATCTTATACTTCGGTCGATGCAATGTATTAGTACACTTACAAATTATAGGCATTTAAGTTCACTGGAATGTCTGTCGAGCTTCTTCACTGTTCACAGAATTCCTCTTAGAATGGAAAACCTTATTCAGCTGTTCTGTTTGTACGTATCTCTTCCATGTGGAGATTCTGAGCGCTTAGCAGGTTCAGATAAATCTTGTCTT                                             ]
[-] EMBL CB666383             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTAACCTTTGTTTACACGGACGATTTGCCTGAGATGAAGCAGCAAGACGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTGACAGGTACAATCTGGAGAGGATGAAGCTGATTTGTGAACATAATTTGTTTAAGCCCATTGACACGGACTCCGTGGTGAACATTTTGGTACTAGCTGAGCAGCACAGCTGCCCCATGCTTAAGGAAGCATGCTTGAAGTTCCTCAGGTCGTCAAGATCTCTGAAGGCCGTCATGGAAACTAATGGGTTTGGGCACTTAATCAGTAGCTGCCCAGGTCTTATTAAGGATATAATGTCCAAGCTTTCTCCTTGTTAACTTGGGAGAATCAAATCAAGGGCATATATAGGGATGAGTCTTCAGTCATGGCAATTGCATTTGTCTATAAGTTAAACTTAGTGCCCCGCTATTATCAAATTTAATAGCCCTAGATATATTTAATCTTATACTTCGGTCGATGCAATGTATTAGTCCCCTTCCAAATTATAGGCATTTAAGTTCCCTGGAATGTCTGTCGAGCTTTTTCACTGTTCACAGAATTCCTCTTAGAATGGAAACCCTTATTCAGCTGTTCTGTTTGTACGTATCTCTTCCATGTGGAGATTTTGAGCGCTTAGCAGGTTCAGATAAATCTTGTCTTTGAATGCTGGATTTGGAAGTTGTGTTTTATCCATTGGCGTAGAAT]


>consensus_8110#0 GAAACCCTCAAAATCCCCTCGCCGTTGCCTCCCTCCTCTCCTCCCGCTGGCGACGGGATA CACCGTGGTCACCTCTCGCCGACCACCATCCACCGCCGCGCGCCATGACCGCCTCCTCGC TCGCCGCCGCCGCCTCCGACGGGGCCTCCTCAAGCTCAGGGTCCGCCTCCGCCATCGTCG CCGGCACGGTGAACGGCCACCACGTGCTCAAGATCGTCGGGTACTCCTTCACCAAGGCCG TCCCCAGTGGCAAGAGCATCAGGTCTCGGCCGTTCCGCGCAGGAGGCCACACCTGGCACG TGCTGTACTACCCCAATGGGAATCGAGCCGAGAAAGCCGATTTCGTGGCCTTCTACCTCT GCCTCGATGACGCCGAGGCCTGCAGCGAGGCCGTGGAGGCGAAGGCCATCTTCAGTTTAC TCGACATGGAGGGGAATCCGGTATCGTCCTACAGATTCACCACCAGGGTGGTCAACTTCA TGGAGCATAAGAAGGATTTCCACACGGAGGAGGAGACGCCGCTCATCGTGGCGCCGCCGT CAGACATGCGCCGGCAATTCGGTGATCTTCTGCTGAGCAAACAAGGCGCGGATGTCAAGT TCCAGGTGGGCAAGAAGAAGTTCGACGCGCACCGATCGGTGCTCGCGGCGCGCTCTCCGG TCTTCAAGGCGCAGCTCTATGGCAGGATGAGGGAGAGTACCACCAGAGGTGCCATAAGAA TCGATGACATGGAGGAAGAAGTGTTCAGGGCTATGCTAACCTTTGTTTACACGGACGATT TGCCTGAGATGAAGCAGCAAGACGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTG ACAGGTACAATCTGGAGAGGATGAAGCTGATTTGTGAACATAATTTGTCTAAGCACATTG ACACGGACTCCGTGGTGAACATTTTGGTACTAGCTGAGCAGCACAGCTGCCACATGCTTA AGGAAGCATGCTTGAAGTTCCTCAGGTCGTCAAGATCTCTGAAGGCCGTCATGGAAACTA ATGGGTTTGGGCACTTAATCAGTAGCTGCCCAGGTCTTATTAAGGATATAATGTCCAAGC TTTCTCCTTGTTAACTTGGGAGAATCAAATCAAGGGCATATATAGGGATGAGTCTTCAGT CATGGCAATTGCATTTGTCTATAAGTTAAACTTAGTGCCCCGCTATTATCAAATTTAATA GCACTAGATATATTTAATCTTATACTTCGGTCGATGCAATGTATTAGTACACTTACAAAT TATAGGCATTTAAGTTCACTGGAATGTCTGTCGAGCTTCTTCACTGTTCACAGAATTCCT CTTAGAATGGAAAACCTTATTCAGCTGTTCTGTTTGTACGTATCTCTTCCATGTGGAGAT TCTGAGCGCTTAGCAGGTTCAGATAAATCTTGTCTTTGAATGCTGGATTTGGAAGTTGTG TTTTATCCATTGGCGTAGAAT



consensusID : consensus_8110#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 872
fasta sequence
                              [TTGTTTAAGATCAGGATAGACGTTTCTGTTATTGCAGATTTCCGCGCAGAGGAGACGCCGCTCATCGTGGTGCCGCCGTCGGACATGCACCCGCAATTTGGTGATCTTCTGCTGAGCAAACAAGGCGTGGATTTCGAATTCCAGGTGGGCAAGAAGAAATTCGACGCGCACCGATTGGTGCTCGCAGCGCGCTCGCCGGTCTTCAGGGCGCAATTCTATGGCAGGATGAGGGAGAGTACCACCAAACGTGCCATAAAAATTGATGACATGGAGGTAGAAGTGTTTGCGGCGATGCTTACTTTCATTTACACAGATGCATTGCCTGAGATGAAGCAGCAAGAAGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTGACAGGTATAATCTGGAGAGGATGAAGCTGATTTGTGAAGATAAGNTGTCCAAGCACATTGACGCAGGCTCCGTGGCGAACATTTTGGCACTAGCTGAGCAGCACAGNTGCCACACGCTTAAGGAAGCATGCTTGGAGTTCCTCAGGTCATCAAGATCTCTGAAGGCAGTCATGGNAACTGATGGGGTTTCGGTACTTAATTGGTAGCTGCCCAGGTCTTATTAAGGGATATCTTTTNCAAGCTTTCTNCTTGGTAACTNGGGGGNATCAAATCAAGGGCATGTGGATGANGATTTAGTCATACCTATTGCAAAACTAAATACTNCGATACTATCAAGNTTAATAGTACTTGCTATGGTTAGTCTTATACTCCAGAGGATCCAATGTATTTCCTCCCTTTTTTTGTCAGGAGAGCTGTGTCTATCCTTTCCGGAGAACTAAGAAGAATTAGTGCACTTGTCTGTCTTGCTTCGTCACTGTTTAAAAAAAAAAAA]

[+] EMBL CA765673             [TTGTTTAAGATCAGGATAGACGTTTCTGTTATTGCAGATTTCCGCGCAGAGGAGACGCCGCTCATCGTGGTGCCGCCGTCGGACATGCACCCGCAATTTGGTGATCTTCTGCTGAGCAAACAAGGCGTGGATTTCGAATTCCAGGTGGGCAAGAAGAAATTCGACGCGCACCGATTGGTGCTCGCAGCGCGCTCGCCGGTCTTCAGGGCGCAATTCTATGGCAGGATGAGGGAGAGTACCACCAAACGTGCCATAAAAATTGATGACATGGAGGTAGAAGTGTTTGCGGCGATGCTTACTTTCATTTACACAGATGCATTGCCTGAGATGAAGCAGCAAGAAGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTGACAGGTATAATCTGGAGAGGATGAAGCTGATTTGTGAAGATAAGNTGTCCAAGCACATTGACGCAGGCTCCGTGGCGAACATTTTGGCACTAGCTGAGCAGCACAGNTGCCACACGCTTAAGGAAGCATGCTTGGAGTTCCTCAGGTCATCAAGATCTCTGAAGGCAGTCATGGNAACTGATGGGGTTTCGGTACTTAATTGGTAGCTGCCCAGGTCTTATTAAGGGATATCTTTTNCAAGCTTTCTNCTTGGTAACTNGGGGGNATCAAATCAAGGGCATGTGGATGANGATTTAGTCATACCTATTGCAAAACTAAATACTNCGATACTATCAAGNTTAATAGTACTTGCTATGGTTAGTC                                                                                                                                  ]
[-] EMBL CA763098             [                                                                                                                                                                               TGGTGCTCGCAGCGCGCTCGCGGTTNTTCAGGGCGCAATTCTATGGCAGGATGAGGGAGAGTACCACCAAACGTGCCATAAAAATTGATGACATGGAGGTAGAAGTGTTTGCGGCGATGCTTACTTTCATTTACACAGATGCATTGCCTGAGATGAAGCAGCAAGAAGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTGACAGGTATAATCTGGAGAGGATGAAGCTGATTTGTGAAGATAAGTTGTCCAAGCACATTGACGCAGGCTCCGTGGCGAACATTTTGGCACTAGCTGAGCAGCACAGTTGCCACACGCTTAAGGAAGCATGCTTGGAGTTCCTCAGGTCATCAAGATCTCTGAAGGCAGTCATGGAAACTGAT GGGTTTCGGTACTTAATTGGTAGCTGCCCAGGTCTTATTAA GGATATCTTTTCCAAGCTTTCTCCTTGTTAACTTGGGGGAATCAAATCAAGGGCATGTGGATGAGGATTTAGTCATACCTATTGCAAAACT AATACTCCGATACTATCAAGTTTAATAGTACCTGCTATGTTTAGTCTTATACTCCAGAGGATCCAATGTATTTCCTCCCTTTTTTTGTCAGGAGAGCTGTGTCTATCCTTTCCGGAGAACTAAGAAGAATTAGTGCACTTGTCTGTCTTGCTTCGTCACTGTTTAAAAAAAAAAAA]


>consensus_8110#1 TTGTTTAAGATCAGGATAGACGTTTCTGTTATTGCAGATTTCCGCGCAGAGGAGACGCCG CTCATCGTGGTGCCGCCGTCGGACATGCACCCGCAATTTGGTGATCTTCTGCTGAGCAAA CAAGGCGTGGATTTCGAATTCCAGGTGGGCAAGAAGAAATTCGACGCGCACCGATTGGTG CTCGCAGCGCGCTCGCCGGTCTTCAGGGCGCAATTCTATGGCAGGATGAGGGAGAGTACC ACCAAACGTGCCATAAAAATTGATGACATGGAGGTAGAAGTGTTTGCGGCGATGCTTACT TTCATTTACACAGATGCATTGCCTGAGATGAAGCAGCAAGAAGAAGCTGCAATGGCTCAG CATTTGCTTGTAGCGGCTGACAGGTATAATCTGGAGAGGATGAAGCTGATTTGTGAAGAT AAGNTGTCCAAGCACATTGACGCAGGCTCCGTGGCGAACATTTTGGCACTAGCTGAGCAG CACAGNTGCCACACGCTTAAGGAAGCATGCTTGGAGTTCCTCAGGTCATCAAGATCTCTG AAGGCAGTCATGGNAACTGATGGGGTTTCGGTACTTAATTGGTAGCTGCCCAGGTCTTAT TAAGGGATATCTTTTNCAAGCTTTCTNCTTGGTAACTNGGGGGNATCAAATCAAGGGCAT GTGGATGANGATTTAGTCATACCTATTGCAAAACTAAATACTNCGATACTATCAAGNTTA ATAGTACTTGCTATGGTTAGTCTTATACTCCAGAGGATCCAATGTATTTCCTCCCTTTTT TTGTCAGGAGAGCTGTGTCTATCCTTTCCGGAGAACTAAGAAGAATTAGTGCACTTGTCT GTCTTGCTTCGTCACTGTTTAAAAAAAAAAAA



consensusID : consensus_8110#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 833
fasta sequence
                              [GGGTTTTGATTTCATGAAAAGGGAATCTTTGGAGGAATCAGAGTATCTCAAGGATGATTGTTTCAAGATCCGGATTGACGTCGTCGTCATTACAGATTTCCACACGGAGGAGGAGACGCCGCTCATCGTGGCGCCGCCGTCAGACATGCGCCGGCAATTCGGTGATCTTCTGCTGAGCAAACAAGGCGCGGATGTCAAGTTCCAGGTGGGCAAGAAGAAGTTCGACGCGCACCGATCGGTGCTCGCGGCGCGCTCTCCGGTCTTCAAGGCGCAGCTCTATGGCAGGATGAGGGAGAGTACCACCAGAGGTGCCATAAGAATCGATGACATGGAGGAAGAAGTGTTCAGGGCTATGCTAACCTTTGTTTACACGGACGATTTGCCTGAGATGAAGCAGCAAGACGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTGACAGGTACAATCTGGAGAGGATGAAGCTGATTTGTGAACATAATTTGTCTAAGCACATTGACACGGACTCCGTGGTGAACATTTTGGTACTAGCTGAGCAGCACAGCTGCCACATGCTTAAGGAAGCATGCTTGAAGTTCCTCAGGTCGTCAAGATCTCTGAAGGCCGTCATGGAAACTAATGGGTTTGGGCACTTAATCAGTAGCTGCCCAGGTCTTATTAAGGATATAATGTCCAAGCTTTCTCCTTGTTAACTTGGGAGAATCAAATCAAGGGCATATATAGGGATGAGTCTTCAGTCATGGCAATTGCATTTGTCTATAAGTTAAACTTAGTGCCCCGCTATTATCAAATTTAATAGCACTAGATATATTTTATCTTATACTTCGGTCG]

[+] EMBL CB666382             [GGGTTTTGATTTCATGAAAAGGGAATCTTTGGAGGAATCAGAGTATCTCAAGGATGATTGTTTCAAGATCCGGATTGACGTCGTCGTCATTACAGATTTCCACACGGAGGAGGAGACGCCGCTCATCGTGGCGCCGCCGTCAGACATGCGCCGGCAATTCGGTGATCTTCTGCTGAGCAAACAAGGCGCGGATGTCAAGTTCCAGGTGGGCAAGAAGAAGTTCGACGCGCACCGATCGGTGCTCGCGGCGCGCTCTCCGGTCTTCAAGGCGCAGCTCTATGGCAGGATGAGGGAGAGTACCACCAGAGGTGCCATAAGAATCGATGACATGGAGGAAGAAGTGTTCAGGGCTATGCTAACCTTTGTTTACACGGACGATTTGCCTGAGATGAAGCAGCAAGACGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTGACAGGTACAATCTGGAGAGGATGAAGCTGATTTGTGAACATAATTTGTCTAAGCACATTGACACGGACTCCGTGGTGAACATTTTGGTACTAGCTGAGCAGCACAGCTGCCACATGCTTAAGGAAGCATGCTTGAAGTTCCTCAGGTCGTCAAGATCTCTGAAGGCCGTCATGGAAACTAATGGGTTTGGGCACTTAATCAGTAGCTGCCCAGGTCTTATTAAGGATATAATGTCCAAGCTTTCTCCTTGTTAACTTGGGAGAATCAAATCAAGGGCATATATAGGGATGAGTCTTCAGTCATGGCAATTGCATTTGTCTATAAGTTAAACTTAGTGCCCCGCTATTATCAAATTTAATAGCACTAGATATATTTTATCTTATACTTCGGTCG]


>consensus_8110#2 GGGTTTTGATTTCATGAAAAGGGAATCTTTGGAGGAATCAGAGTATCTCAAGGATGATTG TTTCAAGATCCGGATTGACGTCGTCGTCATTACAGATTTCCACACGGAGGAGGAGACGCC GCTCATCGTGGCGCCGCCGTCAGACATGCGCCGGCAATTCGGTGATCTTCTGCTGAGCAA ACAAGGCGCGGATGTCAAGTTCCAGGTGGGCAAGAAGAAGTTCGACGCGCACCGATCGGT GCTCGCGGCGCGCTCTCCGGTCTTCAAGGCGCAGCTCTATGGCAGGATGAGGGAGAGTAC CACCAGAGGTGCCATAAGAATCGATGACATGGAGGAAGAAGTGTTCAGGGCTATGCTAAC CTTTGTTTACACGGACGATTTGCCTGAGATGAAGCAGCAAGACGAAGCTGCAATGGCTCA GCATTTGCTTGTAGCGGCTGACAGGTACAATCTGGAGAGGATGAAGCTGATTTGTGAACA TAATTTGTCTAAGCACATTGACACGGACTCCGTGGTGAACATTTTGGTACTAGCTGAGCA GCACAGCTGCCACATGCTTAAGGAAGCATGCTTGAAGTTCCTCAGGTCGTCAAGATCTCT GAAGGCCGTCATGGAAACTAATGGGTTTGGGCACTTAATCAGTAGCTGCCCAGGTCTTAT TAAGGATATAATGTCCAAGCTTTCTCCTTGTTAACTTGGGAGAATCAAATCAAGGGCATA TATAGGGATGAGTCTTCAGTCATGGCAATTGCATTTGTCTATAAGTTAAACTTAGTGCCC CGCTATTATCAAATTTAATAGCACTAGATATATTTTATCTTATACTTCGGTCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8110#0      GAAACCCTCAAAATCCCCTCGCCGTTGCCTCCCTCCTCTCCTCCCGCTGGCGACGGGATA 60
consensus_8110#2      ------------------------------------------------------------
consensus_8110#1      ------------------------------------------------------------
                                                                                  

consensus_8110#0      CACCGTGGTCACCTCTCGCCGACCACCATCCACCGCCGCGCGCCATGACCGCCTCCTCGC 120
consensus_8110#2      ------------------------------------------------------------
consensus_8110#1      ------------------------------------------------------------
                                                                                  

consensus_8110#0      TCGCCGCCGCCGCCTCCGACGGGGCCTCCTCAAGCTCAGGGTCCGCCTCCGCCATCGTCG 180
consensus_8110#2      ------------------------------------------------------------
consensus_8110#1      ------------------------------------------------------------
                                                                                  

consensus_8110#0      CCGGCACGGTGAACGGCCACCACGTGCTCAAGATCGTCGGGTACTCCTTCACCAAGGCCG 240
consensus_8110#2      ------------------------------------------------------------
consensus_8110#1      ------------------------------------------------------------
                                                                                  

consensus_8110#0      TCCCCAGTGGCAAGAGCATCAGGTCTCGGCCGTTCCGCGCAGGAGGCCACACCTGGCACG 300
consensus_8110#2      ------------------------------------------------------------
consensus_8110#1      ------------------------------------------------------------
                                                                                  

consensus_8110#0      TGCTGTACTACCCCAATGGGAATCGAGCCGAGAAAGCCGATTTCGTGGCCTTCTACCTCT 360
consensus_8110#2      ------------------------------------------------------------
consensus_8110#1      ------------------------------------------------------------
                                                                                  

consensus_8110#0      GCCTCGATGACGCCGAGGCCTGCAGCGAGGCCGTGGAGGCGAAGGCCATCTTCAGTTTAC 420
consensus_8110#2      ---------------GGGTTT----TGATTTCATGAA----AAGGGAATCTTTGGAGGAA 37
consensus_8110#1      ------------------------------------------------------------
                                                                                  

consensus_8110#0      TCGACATGGAGGGGAATCCGGTATCGTCCTACAGATTCACCACCAGGGTGGTCAACTTCA 480
consensus_8110#2      TC-------AGAGTATCTCAAGGATG----ATTGTTTCAAGATCCGGATTGACGTCGTCG 86
consensus_8110#1      --------------------------------TTGTTTAAGATCAGGATAGACGTTTCTG 28
                                                         ** *  * * ** * * *       

consensus_8110#0      TGGAGCATAAGAAGGATTTCCACACGGAGGAGGAGACGCCGCTCATCGTGGCGCCGCCGT 540
consensus_8110#2      T----CATTACA--GATTTCCACACGGAGGAGGAGACGCCGCTCATCGTGGCGCCGCCGT 140
consensus_8110#1      T----TATTGCA--GATTTCCGCGCAGAGGAG---ACGCCGCTCATCGTGGTGCCGCCGT 79
                      *     **   *  ******* * * ******   **************** ********

consensus_8110#0      CAGACATGCGCCGGCAATTCGGTGATCTTCTGCTGAGCAAACAAGGCGCGGATGTCAAGT 600
consensus_8110#2      CAGACATGCGCCGGCAATTCGGTGATCTTCTGCTGAGCAAACAAGGCGCGGATGTCAAGT 200
consensus_8110#1      CGGACATGCACCCGCAATTTGGTGATCTTCTGCTGAGCAAACAAGGCGTGGATTTCGAAT 139
                      * ******* ** ****** **************************** **** ** * *

consensus_8110#0      TCCAGGTGGGCAAGAAGAAGTTCGACGCGCACCGATCGGTGCTCGCGGCGCGCTCTCCGG 660
consensus_8110#2      TCCAGGTGGGCAAGAAGAAGTTCGACGCGCACCGATCGGTGCTCGCGGCGCGCTCTCCGG 260
consensus_8110#1      TCCAGGTGGGCAAGAAGAAATTCGACGCGCACCGATTGGTGCTCGCAGCGCGCTCGCCGG 199
                      ******************* **************** ********* ******** ****

consensus_8110#0      TCTTCAAGGCGCAGCTCTATGGCAGGATGAGGGAGAGTACCACCAGAGGTGCCATAAGAA 720
consensus_8110#2      TCTTCAAGGCGCAGCTCTATGGCAGGATGAGGGAGAGTACCACCAGAGGTGCCATAAGAA 320
consensus_8110#1      TCTTCAGGGCGCAATTCTATGGCAGGATGAGGGAGAGTACCACCAAACGTGCCATAAAAA 259
                      ****** ******  ****************************** * ********* **

consensus_8110#0      TCGATGACATGGAGGAAGAAGTGTTCAGGGCTATGCTAACCTTTGTTTACACGGACGATT 780
consensus_8110#2      TCGATGACATGGAGGAAGAAGTGTTCAGGGCTATGCTAACCTTTGTTTACACGGACGATT 380
consensus_8110#1      TTGATGACATGGAGGTAGAAGTGTTTGCGGCGATGCTTACTTTCATTTACACAGATGCAT 319
                      * ************* *********   *** ***** ** **  ******* ** *  *

consensus_8110#0      TGCCTGAGATGAAGCAGCAAGACGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTG 840
consensus_8110#2      TGCCTGAGATGAAGCAGCAAGACGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTG 440
consensus_8110#1      TGCCTGAGATGAAGCAGCAAGAAGAAGCTGCAATGGCTCAGCATTTGCTTGTAGCGGCTG 379
                      ********************** *************************************

consensus_8110#0      ACAGGTACAATCTGGAGAGGATGAAGCTGATTTGTGAACATAATTTGTCTAAGCACATTG 900
consensus_8110#2      ACAGGTACAATCTGGAGAGGATGAAGCTGATTTGTGAACATAATTTGTCTAAGCACATTG 500
consensus_8110#1      ACAGGTATAATCTGGAGAGGATGAAGCTGATTTGTGAAGATAAGNTGTCCAAGCACATTG 439
                      ******* ****************************** ****  **** **********

consensus_8110#0      ACACGGACTCCGTGGTGAACATTTTGGTACTAGCTGAGCAGCACAGCTGCCACATGCTTA 960
consensus_8110#2      ACACGGACTCCGTGGTGAACATTTTGGTACTAGCTGAGCAGCACAGCTGCCACATGCTTA 560
consensus_8110#1      ACGCAGGCTCCGTGGCGAACATTTTGGCACTAGCTGAGCAGCACAGNTGCCACACGCTTA 499
                      ** * * ******** *********** ****************** ******* *****

consensus_8110#0      AGGAAGCATGCTTGAAGTTCCTCAGGTCGTCAAGATCTCTGAAGGCCGTCATGGAAACTA 1020
consensus_8110#2      AGGAAGCATGCTTGAAGTTCCTCAGGTCGTCAAGATCTCTGAAGGCCGTCATGGAAACTA 620
consensus_8110#1      AGGAAGCATGCTTGGAGTTCCTCAGGTCATCAAGATCTCTGAAGGCAGTCATGGNAACTG 559
                      ************** ************* ***************** ******* **** 

consensus_8110#0      ATGGG-TTTGGGCACTTAATCAGTAGCTGCCCAGGTCTTATTAAGG-ATATAATGTCCAA 1078
consensus_8110#2      ATGGG-TTTGGGCACTTAATCAGTAGCTGCCCAGGTCTTATTAAGG-ATATAATGTCCAA 678
consensus_8110#1      ATGGGGTTTCGGTACTTAATTGGTAGCTGCCCAGGTCTTATTAAGGGATATCTTTTNCAA 619
                      ***** *** ** *******  ************************ ****  * * ***

consensus_8110#0      GCTTTCTCCTTGTTAACTTGGGAGAATCAAATCAAGGGCATATATAGGGATGAGTCTTCA 1138
consensus_8110#2      GCTTTCTCCTTGTTAACTTGGGAGAATCAAATCAAGGGCATATATAGGGATGAGTCTTCA 738
consensus_8110#1      GCTTTCTNCTTGGTAACTNGGGGGNATCAAATCAAGGGCATGT----GGATGANGATTTA 675
                      ******* **** ***** *** * **************** *    ******   ** *

consensus_8110#0      GTCATGGCAATTGCATTTGTCTATAAGTTAAACTTAGTGCCCCGCTATTATCAAATTTAA 1198
consensus_8110#2      GTCATGGCAATTGCATTTGTCTATAAGTTAAACTTAGTGCCCCGCTATTATCAAATTTAA 798
consensus_8110#1      GTCATACCTATTGCA--------------AAACTAAATACTNCGATACTATCAAGNTTAA 721
                      *****  * ******              ***** * * *  ** ** ******  ****

consensus_8110#0      TAGCACTAGATATATTTAATCTTATACTTCGGTCGATGCAATGTATTAGTACACTTACAA 1258
consensus_8110#2      TAGCACTAGATATATTTTATCTTATACTTCGGTCG------------------------- 833
consensus_8110#1      TAGTACTTGCTATGGTTAGTCTTATACTCCAGAGGATCCAATGTATTTCCTCCCTT---- 777
                      *** *** * ***  **  ********* * *  *                         

consensus_8110#0      ATTATAGGCATTTAAGTTCACTGGAATGTCTGTCGAGCTTCTTCACTGTTCACAGAATTC 1318
consensus_8110#2      ------------------------------------------------------------
consensus_8110#1      ----------TTTTTGTCAG--GAGAGCTGTGTCTATCCTTTCCGGAGAACTAAGAAGAA 825
                                                                                  

consensus_8110#0      CTCTTAGAATGGAAAACCTTATTCAGCTGTTCTGTTTGTACGTATCTCTTCCATGTGGAG 1378
consensus_8110#2      ------------------------------------------------------------
consensus_8110#1      TTAGTGCACTTGTCTGTCTTGCTTCGTCACTGTTTAAAAAAAAAAAA------------- 872
                                                                                  

consensus_8110#0      ATTCTGAGCGCTTAGCAGGTTCAGATAAATCTTGTCTTTGAATGCTGGATTTGGAAGTTG 1438
consensus_8110#2      ------------------------------------------------------------
consensus_8110#1      ------------------------------------------------------------
                                                                                  

consensus_8110#0      TGTTTTATCCATTGGCGTAGAAT 1461
consensus_8110#2      -----------------------
consensus_8110#1      -----------------------
                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)