These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8151#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2511 fasta sequence [GAGAAAGAGGAGTGAGAGGAGTTAATAATATCCCATCATTCACACTCCACGGCATCATTGGCAACTCCTCTCTTCCATTCCATTCAACCACATCTGTTTCTTTAATTGCTGCGTTTAATCACTCTCCTCCTCACCAACCGCTTCGTTCTCCGTTGGTGTATAGTTGCCGCAGCAGCAGCAGCACTCGCCACTGTTCTTTCTTTCTCTCTTTCTCCTCCTGCTGCTGCGTTGCTTTCTTCAGGCAGCTAGCTCAGCTGCTTGTGCGTGCATGGGAAGGAGTAGGAGGAGGAGGCTCTGAGAGGGAGGGAGGAGGAGGAAGAAGAAGAAGAAGATGAAGTTCATGAAGCTGGGCTCCAAGCCCGACGCCTTCCAGTCCGACGGCGCCGACGTCAGATATGTGATCTCAGACCTCGCAACAGATGTCATTGTGCATGTCAGCGAAGTCAAATTTTACTTACATAAGTTTCCCCTTCTGTCCAAGAGCAGCAAGCTTCAGAGGTTAGTTATTAAGGCCACCGAGGAGGGGACTGATGAGGTCCACATAGATGGCTTTCCTGGAGGAGTGACAGCGTTCGAAATATGCGCTAAGTTCTGCTATGGGATGGTTGTTACCCTCAGTCCTCACAATGTTGTTGCAGCAAGATGTGCAGCAGAGTACCTTGAAATGACTGAAGATGTGGACAAGGGAAACTTGATATTCAAAATCGATGTCTTCATAAATTCTAGCATCCTCCGTAGCTGGAAAGACTCTATCATTGTTCTCCAGAGTACAAAAGCACTATTACCTTGGTCCGAAGAGCTGAAGGTCATCGGCAGATGTATAGATGCTATTGCTTCAAAGACATCTGTGGATCCAGCTAATGTAACCTGGTCATACAGTCACAGCAGGAAAGGAATGAGCTGTACTGAAATAGTTGAATCAACAGGAAGAACATCAATAGCTCCTAAAGACTGGTGGGTTGAGGACTTATGCGAGCTCGATGTTGACCTCTACAAGAGAGTGATGGTTGCTGTCAAATCCAAGGGGAGAATGTCACCTGAATTGATAGGGGAAGCCCTTAAAGCATATGCTGTCAGATGGCTGCCAGATTCTTATGATGCTTTGGTCGCGGAGGATTACATGAGAAGGAACCAATGTTTGGTCGAGACTATAATATGGTTATTGCCGTCAGATAAGACATCAGGTTGTTCTTGCAGGTTTCTCTTGAAACTGTTGAAAGTTGCTATATTGGTTGGAGCTGGGCAACATGTGAAGGAAGAACTTATGTGAAGGATTAGTTTCCAGTTGCACAAAGCTTCGGTTAAGGATCTCTTACTACCTGCTGCTTCACCCAGTGATGGCGCACACGATGTTAAGTTAGTCCATAATCTTGTGCAGAGATTTGTTGCAA-GAACAGCGATGTCCCACAATGGTGGTTTTGTTGAGAAATCTGATGACAAAATGATTGAGCTTAAC-TTTGAACAAGAATCCACTTTGGCTTTAGGAGAGCTGGTTGATGGCTATATATCTGAAGTAGCTTCAGATCCAGACCTTTCATTGTCTACATTTGTTGAACTAGCAACAGCGGTTCCAGAAGCAGCTAGGCCTGTTCATGACAGCTTGTACTCAGCTGTTGATGCATATCTCAAGGAGCATCCAAACATAAGTAAAGCCGACAAGAAGAAGATCTGCGGTCTGATAGATGTCAAGAAGCTTTCAACAGATGCAAGCATGCACGCCACGCAAAACGACAGCCTACCGCTCCGGTTGGTGGTGCAGGTCCTCTTCTTCCAACAGCTGAGGGCGGGTTCCAGCAATGCGCTTGCTCTAACGGATGGTGGAGGACACACGTGCGCAAAGCCTATTATGAAGGATCAGAGTGACATTTGCGAAAGACGGATACCAAGGCATCCAAACTCGCTGAACAAGCAAGCGACCAGCCTAAGCGCGAGAGAGGTCGAGCACCGGAAGAGCGAGCACAGGGGAGGAGGCAGGAACAGCTTCAAGGACCAGCTTGGCGGCTTCCTTCTGCAGTCAAGGTCCAGGAGGATCTTTGACAAGATATGGAGCAGCAAGGGGCAGGGAGAGAATGGCAAAGGTTCAGAGACGTCAGGTAGCTCACAGAGCCCGCCATTGTCGGCTAAGCCTGCAGATGTGAAGCCCTCTCCCCTCCCACCTCTTAGGAACAGGAGATATTCTGTTTCATAGGGTTCTTGTTTACTTCTTTTAATTTAGCTCTGGGTTAGGTTGTACAGAAAAGATAAGTTGATCAGCTGGCTGCACATCATTTTTGGTTTGATCCTTGCTCAGATCAGTGAAGAGAAAGGTGTGGGGGTAAGGGTGTAAGCACTAAGTACTAAGCACTTGTTCTACCTGCTGCTTTCTGTATGTTTATCAAGTTGTAGCTTACTATAGTGTCATCTTGACTTGAGAGAGATTTGCTAGGGCCTTTTATTGGAAATGTCTATGAACAAGAAGCGAAAAACTAATGAAAAGGGTTCATGAGGTTGGTGTTTAAAAAAAAAAAAAAA] [+] EMBL AK065475 [GAGAAAGAGGAGTGAGAGGAGTTAATAATATCCCATCATTCACACTCCACGGCATCATTGGCAACTCCTCTCTTCCATTCCATTCAACCACATCTGTTTCTTTAATTGCTGCGTTTAATCACTCTCCTCCTCACCAACCGCTTCGTTCTCCGTTGGTGTATAGTTGCCGCAGCAGCAGCAGCACTCGCCACTGTTCTTTCTTTCTCTCTTTCTCCTCCTGCTGCTGCGTTGCTTTCTTCAGGCAGCTAGCTCAGCTGCTTGTGCGTGCATGGGAAGGAGTAGGAGGAGGAGGCTCTGAGAGGGAGGGAGGAGGAGGAAGAAGAAGAAGAAGATGAAGTTCATGAAGCTGGGCTCCAAGCCCGACGCCTTCCAGTCCGACGGCGCCGACGTCAGATATGTGATCTCAGACCTCGCAACAGATGTCATTGTGCATGTCAGCGAAGTCAAATTTTACTTACATAAGTTTCCCCTTCTGTCCAAGAGCAGCAAGCTTCAGAGGTTAGTTATTAAGGCCACCGAGGAGGGGACTGATGAGGTCCACATAGATGGCTTTCCTGGAGGAGTGACAGCGTTCGAAATATGCGCTAAGTTCTGCTATGGGATGGTTGTTACCCTCAGTCCTCACAATGTTGTTGCAGCAAGATGTGCAGCAGAGTACCTTGAAATGACTGAAGATGTGGACAAGGGAAACTTGATATTCAAAATCGATGTCTTCATAAATTCTAGCATCCTCCGTAGCTGGAAAGACTCTATCATTGTTCTCCAGAGTACAAAAGCACTATTACCTTGGTCCGAAGAGCTGAAGGTCATCGGCAGATGTATAGATGCTATTGCTTCAAAGACATCTGTGGATCCAGCTAATGTAACCTGGTCATACAGTCACAGCAGGAAAGGAATGAGCTGTACTGAAATAGTTGAATCAACAGGAAGAACATCAATAGCTCCTAAAGACTGGTGGGTTGAGGACTTATGCGAGCTCGATGTTGACCTCTACAAGAGAGTGATGGTTGCTGTCAAATCCAAGGGGAGAATGTCACCTGAATTGATAGGGGAAGCCCTTAAAGCATATGCTGTCAGATGGCTGCCAGATTCTTATGATGCTTTGGTCGCGGAGGATTACATGAGAAGGAACCAATGTTTGGTCGAGACTATAATATGGTTATTGCCGTCAGATAAGACATCAGGTTGTTCTTGCAGGTTTCTCTTGAAACTGTTGAAAGTTGCTATATTGGTTGGAGCTGGGCAACATGTGAAGGAAGAACTTATGTGAAGGATTAGTTTCCAGTTGCACAAAGCTTCGGTTAAGGATCTCTTACTACCTGCTGCTTCACCCAGTGATGGCGCACACGATGTTAAGTTAGTCCATAATCTTGTGCAGAGATTTGTTGCAA GAACAGCGATGTCCCACAATGGTGGTTTTGTTGAGAAATCTGATGACAAAATGATTGAGCTTAAC TTTGAACAAGAATCCACTTTGGCTTTAGGAGAGCTGGTTGATGGCTATATATCTGAAGTAGCTTCAGATCCAGACCTTTCATTGTCTACATTTGTTGAACTAGCAACAGCGGTTCCAGAAGCAGCTAGGCCTGTTCATGACAGCTTGTACTCAGCTGTTGATGCATATCTCAAGGAGCATCCAAACATAAGTAAAGCCGACAAGAAGAAGATCTGCGGTCTGATAGATGTCAAGAAGCTTTCAACAGATGCAAGCATGCACGCCACGCAAAACGACAGCCTACCGCTCCGGTTGGTGGTGCAGGTCCTCTTCTTCCAACAGCTGAGGGCGGGTTCCAGCAATGCGCTTGCTCTAACGGATGGTGGAGGACACACGTGCGCAAAGCCTATTATGAAGGATCAGAGTGACATTTGCGAAAGACGGATACCAAGGCATCCAAACTCGCTGAACAAGCAAGCGACCAGCCTAAGCGCGAGAGAGGTCGAGCACCGGAAGAGCGAGCACAGGGGAGGAGGCAGGAACAGCTTCAAGGACCAGCTTGGCGGCTTCCTTCTGCAGTCAAGGTCCAGGAGGATCTTTGACAAGATATGGAGCAGCAAGGGGCAGGGAGAGAATGGCAAAGGTTCAGAGACGTCAGGTAGCTCACAGAGCCCGCCATTGTCGGCTAAGCCTGCAGATGTGAAGCCCTCTCCCCTCCCACCTCTTAGGAACAGGAGATATTCTGTTTCATAGGGTTCTTGTTTACTTCTTTTAATTTAGCTCTGGGTTAGGTTGTACAGAAAAGATAAGTTGATCAGCTGGCTGCACATCATTTTTGGTTTGATCCTTGCTCAGATCAGTGAAGAGAAAGGTGTGGGGGTAAGGGTGTAAGCACTAAGTACTAAGCACTTGTTCTACCTGCTGCTTTCTGTATGTTTATCAAGTTGTAGCTTACTATAGTGTCATCTTGACTTGAGAGAGATTTGCTAGGGCCTTTTATTGGAAATGTCTATGAACAAGAAGCGAAAAACTAATGAAAAGGGTTCATGAG ] [+] EMBL AU062745 [ CCTNCTGCTGCGTTGCTTTCTNCAGGCAGCTAGCTCAGCTGCTTGTNCGTGCATGGGAAGGAGTAGGAGGAGGAGGCTCTNAGAGGGAGGGAGGAGGAGGAAGAAGAAGAAGAAGATGAAGTTCATNAAGCTGGGCTCCAAGCCCGACGNCTTCCAGTCCGACGGCGCCGACGTCAGATATGTGATCTCAGACCTNGCAACANATGTCATTGTGCATNTCAGCGAAGTCAAATTTTACTTACATAAGNTTCCCCTTCTNTNCAAGAGCANCAAGCTTNANAGGTTAGTTATTAAGGNCACCGAGGTGGGGACTttatn ] [+] EMBL OSC111591 [ ACATGAGAAGGAACCAATGTTTGGTCGAGACTATAATATGGTTATTGCCGTCAGATAAGACATCAGGTTGTTCTTGCAGGTTTCTCTTGAAACTGTTGAAAGTTGCTATATTGGTTGGAGCTGGGCAACATGTGAAGGAAGAACTTATGAGAAGGATTAGTTTCCAGTTGCACAAAGCTTCGGTTAAGGATCTCTTACTACCTGCTGCTTCACCCAGTGATGGCGCACACGATGTTAAGTTAGTCCATAATCTTGTGCAGAGATTTGTTGCAAGGAACAGCGATGTCCCACAATGGTGGTTTTGTTGAGAAATCTGATGACAAAATGATTGAGCTTAACTTTTGAACAAGAATCCACTT ] [+] EMBL AU092173 [ GGNCCAGCTTGGCGGCTTCCTTCTGCAGTCAAGGTCCAGGAGGATCTTTGACAAGATATGGAGCAGCAAGGGGCAGGGAGAGAATGGCAAAGGTTCAGAGNCGTCAGGTAGCTCACAGAGCCCGCCATTGTCGGCTAAGCCTGCAGATGTGAAGCCCTCTCCCCTCCCACCTCTTAGGAACAGGAGATATTCTGTTTCATNGGGTTCTTGTTTACTTCTTTTAATTTAGCTCTGGGTTAGGTTGTACAGAAAAGATAAGTTGATCAGCTGGCTGCACATCATTTTTGGTTTGATCCTTGCTCAGATCAGTGAAGAGAAAGGTGTGGGGGTAAGGGTGTAAGCACTAAGTACTAAGCACTTGTTCTACCTGCTGCTTTCTGTATGTTTATCAAGTTGTAGCTTACTATAGTGTCATCTTGACTTGAGAGAGATTTGCTAGGGCCTTTTATTGGAAATGTCTATGAACAAGAAGCGAAAAACTAATGAAAAGGGTTCATGAGGTTGGTGTTTAAAAAAA ] [+] EMBL AU091282 [ ATTTAGCTCTGGGTTAGGTTGTACAGAAAAGATAAGTTGATCAGCTGGCTGCACATCATTTTTGGTTTGANCCTTGCTCAGATCAGTGAAGAGAAAGGTGTGGGGGTAAGGGTGTAAGCACTAAGTACTAAGCACTTGTTCTACCTGCTGCTTTCTGTATGTTTATCAAGTTGTAGCTTACTATAGTGTCATCTTGACTTGAGAGAGATTTGCTAGGGCCTTTTATTGGAAATGTCTATGAACAAGAAGCGAAAAACTAATGAAAAGGGTTCATGAGGTTGGTGTTTAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||