These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8152#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1390 fasta sequence [ACGCCGCCGCCTTCCTCCAGGGCCTCCTCCACCCGCTCGACTCGCCGGCCACCACCGTCCCCGGCGACTTCACCTTCCGCGACCGCTTCCTCCTCCGCGACCCCGTCGACGCCCTCGCGCTCCCCGGCCTCCTCGTCCTCCCGCAATCCTTCGGGGCGATCTATTTGGGGGAGACCTTCTGCAGCTACATCAGCATCAACAATAGCTCCAGCTTCGAGGCCAGGGACGTCGCCATTAAGGCAGAAATACAAACCGAGAGACAGAGGATACTTCTTTTGGATACATCTAAGGCCCCTGTTGAGTCAATCAGATCTGGGGGTAGATATGATTTCATTGTGGAACATGATGTCAAAGAACTGGGAGCACATACGCTTGTCTGCACTGCTTTATATAATGATGGTGATGGGGAGCGTAAATATCTTCCTCAATTCTTTAAGTTCACTGTTTCAAATCCATTGTCTGTTAGAACGAAGGTTCGCACCATCAAGGATACCACTTATCTGGAAGCCTGCATAGAGAATCATACAAAATCTAATCTTTATATGGACCAAGTTGATTTTGAACCTTCCCAACAATGGGCAGCTACAAGATTAGAAGCCGATGAACATCCGTCAACAGTGAAGTCTATAATCGGGGACTTGTGCAAGCAACCGATTCTCATCAGAGCTGGAGGAGGAATATACAATTACCTATATCAACTCAGACCATCGTCTGGTGAGTCTGGTCAAAC-AAGGCAGAGGGAAGCAGCATACTCGGGAAATTTCAGATCACATGGCGGACAAATCTCGGGGAGCCTGGGCGTTTGCAAACTCAAAACATACATAGCACTCCCACTGCAAGCAAAGATGTTGATCTTCGTGCTGTGAAAGTTCCACCTGTGATATTTCTGGAAAGACCATTTATGGTTAATTTATGCCTTACAAACCAATCAGACAAGACAGTTGGCCCTTTTGAAGTATTTTTAGCACCAAGCGTACTTGATGAAGAGAAATATGTTCTGGTCAATGGATTACAGAAGTTGGTTTTGCCACTAGTTGAGGCTTTTGAATCCATCAACTTTGACTTGAGTATGGTAGCTACTCAAGTAGGCGTGCAAAAAATTTCTGGAATTACACTGTATGCCGTGCAGGAAAAGAAGCTTTACGAACCTTTGTCAGACATAGAGATTTTCGTTGATGCAGAATAGAACAACGCTGCATTGGAAAACAGACACAGATGTTCCCCCATGTTTTCATCATCTGAGAAAGGG--ATATACATATCGTCAAGCGTATTCTAGTTGATGTATTTTTTGTTTATTGTACAATTGATTATATCCGATTGTAACGAGACACATTTTTACCAAAAAGGGAAATAGATTGAATATTCTTCCAAGGAATGCAGATGCGGGCAT] [+] EMBL CB684323 [ACGCCGCCGCCTTCCTCCAGGGCCTCCTCCACCCGCTCGACTCGCCGGCCACCACCGTCCCCGGCGACTTCACCTTCCGCGACCGCTTCCTCCTCCGCGACCCCGTCGACGCCCTCGCGCTCCCCGGCCTCCTCGTCCTCCCGCAATCCTTCGGGGCGATCTATTTGGGGGAGACCTTCTGCAGCTACATCAGCATCAACAATAGCTCCAGCTTCGAGGCCAGGGACGTCGCCATTAAGGCAGAAATACAAACCGAGAGACAGAGGATACTTCTTTTGGATACATCTAAGGCCCCTGTTGAGTCAATCAGATCTGGGGGTAGATATGATTTCATTGTGGAACATGATGTCAAAGAACTGGGAGCACATACGCTTGTCTGCACTGCTTTATATAATGATGGTGATGGGGAGCGTAAATATCTTCCTCAATTCTTTAAGTTCACTGTTTCAAATCCATTGTCTGTTAGAACGAAGGTTCGCACCATCAAGGATACCACTTATCTGGAAGCCTGCATAGAGAATCATACAAAATCTAATCTTTATATGGACCAAGTTGATTTTGAACCTTCCCAACAATGGGCAGCTACAAGATTAGAAGCCGATGAACATCCGTCAACAGTGAAGTCTATAATCGGGGACTTGTGCAAGCAACCGATTCTCATCAGAGCTGGAGGAGGAATATACAATTACCTATATCAACTCAGACCATCGTCTGGTGAGTCTGGTCAAAC AAGGCAGAGGGAAGCAGCATACTCGGGAAATTTCAGATCACATGGCGGACAAATCTCGGGGAGCCTGGGCGTTTGCAAACTCAAA ] [+] EMBL AU077451 [ TCCTCCTCCGCGACCCCGTCGACGCCCTCGCGCTCCCCGGCCTCCTCGTCCTCCCGCAATCCTTCGGGGCGATCTATTTNGGGGAGACCTTCTGCAGCTACATCAGCATCAACAATAGCTCCAGCTTCGAGGCCAGGGACGTCGCCATTAAGGCAGAAATACAAACCGAGAGACAGAGGATACTTCTTTTGGATACATCTAAGGCCCCTGTTGAGTCAATCAGATCTGGGGGTAGATATGATTTCATTGTGGAACATGATGTCAAAGAACTGGGAGCACATACGCTTGTCTGCACTGCTTTATATAATGATGGTGATGGGGAGCGTAAATATCTTCCTCAATTCTTTAAGTTCACTGTTTCAAATCCATTGTCTGTTAGAACGAA GTTCGCACCATCAAGGATACCACTTATCTGGAAGCCTGCATAGAGAATCATACAAAATCTAATCTTTATATGGACCAAGTTGATTTTGAACCTTCCCAACAATGGGCAGCTACAAGATTAGAAGCCGATGAACATCCGTCAACAGTGAAGTCTATAATCGGGGACTTGTGCAAGCAACCGATTCTCATCAGAGCTGGAGGAGGAATATACAATTACCTATATCAACTCAGACCATC ] [-] EMBL CB684324 [ AGACCATCGTCTGGTGAGTCTGGTCAAACAAAGGCAGAGGGAAGCAGCATACTCGGGAAATTTCAGATCACATGGCGGACAAATCTCGGGGAGCCTGGCCGTTTGCAAACTCAAAACATACATAGCACTCCCACTGCAAGCAAAGATGTTGATCTTCGTGCTGTGAAAGTTCCACCTGTGATATTTCTGGAAAGACCATTTATGGTTAATTTATGCCTTACAAACCAATCAGACAAGACAGTTGGCCCTTTTGAAGTATTTTTAGCACCAAGCGTACTTGATGAAGAGAAATATGTTCTGGTCAATGGATTACAGAAGTTGGTTTTGCCACTAGTTGAGGCTTTTGAATCCATCAACTTTGACTTGAGTATGGTAGCTACTCAAGTAGGCGTGCAAAAAATTTCTGGAATTACACTGTATGCCGTGCAGGAAAAGAAGCTTTACGAACCTTTGTCAGACATAGAGATTTTCGTTGATGCAGAATAGAACAACGCTGCATTGGAAAACAGACACAGATGTTCCCCCATGTTTTCATCATCTGAGAAAGGG ATATACATATCGTCAAGCGTATTCTAGTTGATGTATTTTTTGTTTATTGTACAATTAATT ] [+] EMBL CA765762 [ CGTTTGCAAACTCAAAACATACATAGCACTCCCACTGCAAGCAAAGATGTTGATCTTCGTGCTGTGAAAGTTCCACCTGTGATATTTCTGGAAAGACCATTTATGGTTAATTTATGCCTTACAAACCAATCAGACAAGACAGTTGGCCCTTTTGAAGTATTTTTAGCACCAAGCGTACTTGATGAAGAGAAATATGTTCTGGTCAATGGATTACAGAAGTTGGTTTTGCCACTAGTTGAGGCTTTTGAATCCATCAACTTTGACTTGAGTATGGTAGCTACTCAAGTAGGCGTGCAAAAAATTTCTGGAATTACACTGTATGCCGTGCAGGAAAAGAAGCTTTACGAACCTTTGTCAGACATAGAGATTTTCGTTGATGCAGAATAGAACAACGCTGCATTGGGAAACAGACACAGATGTTCCCCCATGTTTTCATCATCTGAGAAAGGGATATATACATATCGTCAAGCGTATTCTAGTTGATGTATTTTTTGTTTGTTGTACAATTGATTATATCCGATTGTAACGAGACACATTTTTACCAAAAAGGGAAATAGATTGAATA ] [+] EMBL AK058916 [ GTCAATGGATTACAGAAGTTGGTTTTGCCACTAGTTGAGGCTTTTGAATCCATCAACTTTGGCTTGAGTATGGTAGCTACTCAAGTAGGCGTGCAAAAAATTTCTGGAATTACACTGTATGCCGTGCAGGAAAAGAAGCTTTACGAACCTTTGTCAGACATAGAGATTTTCGTTGATGCAGAATAGAACAACGCTGCATTGGAAAACAGACACAGATGTTCCCCCATGTTTTCATCATCTGAGAAAGGG ATATACATATCGTCAAGCGTATTCTAGTTGATGTATTTTTTGTTTATTGTACAATTGATTATATCCGATTGTAACGAGACACATTTTTACCAAAAAGGGAAATAGATTGAATGTTCTTCCAAGGAATGCAGATGCGGGCAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||