These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8154#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1337 fasta sequence [GTGTCCA-CTC-CTGCCCCCAGACTTTCTCCATTCCACCCCATCCTCGACTCGCAAGTACCCAGCTAAGATCAGGGAGCTCATCTCCAGGAGACGGCAATTAACAGGTAACTTCTCTAGTTCTCCTCGTCTCTTCTGCTCCATCTCCGGCGACCAGTGATTCTTGGTGTGCCACTACACTACTAGTGGTACTCCAACAAGTCTGACGGCCAATGCCAACTCAATCGCTGCTTTTCCCCAAAGGCGAATCTATCTGCATCTGGATTACCAAGGACGGCTAGTGAATAGAAGGGGGAGAGAGAGATGGACGGAGCAGCAGTTAGTGCTGCCACTGGGGTGATGGGTTCCCTCCTTGCCAAGCTATCTGCCTTGCTGGGAGAGGAATACAGGCTTCTGAAAGGTGTCAACTCTGACATTAGGTTCTTGAGAGATGAGCTGACTGCCATCAACAACTTTCTTATCAACATGTCAAATATGGAGGAGAACCTGGGTGAGCAGGAGAAGGAGTGGAGAAACAGGGTCCGAGAAATCGAGGATTGCATCGATTTATTCATGCGCAAATTCAATCATGGGGATGTGGATGCCAACTTTGTCCGCAGGACAGCAAAAAAGATAGGAATGTTATGGTCACGTCATGAAATTGCTAGCCAGATCCATCAACTTAAGGATTGTGTTAACGAAGAGAGTGCCCGTCGTTTGAGGTATAGATTTGGTGAAAGCAATGCCCGCATAGTTGAAATTGATCCTGGACTACCAGCACTCTATGTGGAAGCAGAGAAACTTGTTGGCATCCATGGCCCTATGGAGAAGATCATTGATTTGTTGACAAAACAGGATGGATCCTCACAACAGCTGAAAGTGGTTTCCATTGTGGGCTTTGGGGGCCTTGGCAAGACTACTCTTGCTAACCAAGTACTTAAAAAAATCAAGCATCAGTTTGATTGCACAGCTTTAGTATTTATTTCACGGAGTCCTGACATTAAGAAGATCTTATTTGTTTTGCTTAAAGATATGATCAACAAAAACAATTCTAATGATGAGAAGCACAAAAAAGTTGTTGGGATCAAGGCAGAAAAATCAGATGATGAGAAACAACTAATCAATAAGCTCAGAGAATACCTAACAAGTAGAAGGTGGGCACAAAAATAATTGGTTCTCTTTCATTTACTTTCCTGTTAAAGTCTTCATCTTAAATTTTTCAAGTCGTTTCCATTTGTTGAGGTCCCTTTTTCCTTTGCTGTACAATTTGATACAAGCCAATTCAAAACCCATGTAAATAGAATCATTACTCATATTTGTAATTAAAGGGTAAACTTGATAATATAAGACTTTGATGCCCT] [+] EMBL CB678564 [GTGTCCACCTCTCTGCCCCCAGACTTTCTCCATTCCACCCCATCCTCGACTCGCAAGTACCCAGCTAAGATCAGGGAGCTCATCTCCAGGAGACGGCAATTAACAGGTAACTTCTCTAGTTCTCCTCGTCTCTTCTGCTCCATCTCCGGCGACCAGTGATTCTTGGTGTGCCACTACACTACTAGTGGTACTCCAACAAGTCTGACGGCCAATGCCAACTCAATCGCTGCTTTTCCCCAAAGGCGAATCTATCTGCATCTGGATTACCAAGGACGGCTAGTGAATAGAAGGGGGAGAGAGAGATGGACGGAGCAGCAGTTAGTGCTGCCACTGGGGTGATGGGTTCCCTCCTTGCCAAGCTATCTGCCTTGCTGGGAGAGGAATACAGGCTTCTGAAAGGTGTCAACTCTGACATTAGGTTCTTGAGAGATGAGCTGACTGCCATCAACAACTTTCTTATCAACATGTCAAATATGGAGGAGAACCTGGGTGAGCAGGAGAAGGAGTGGAGAAACAGGGTCCGAGAAATCGAGGATTGCATCGATTTATTCATGCGCAAATTCAATCATGGGGATGTGGATGCCAACTTTGTCCGCACGACAGCAAAAAAGATACGAATG ] [+] EMBL CB678525 [ TGTCCA CTC CTGCCCCCAGACTTTCTCCATTCCACCCCATCCTCGACTCGCAAGTACCCAGCTAAGATCAGGGAGCTCATCTCCAGGAGACGGCAATTAACAGGTAACTTCTCTAGTTCTCCTCGTCTCTTCTGCTCCATCTCCGGCGACCAGTGATTCTTGGTGTGCCACTACACTACTAGTGGTACTCCAACAAGTCTGACGGCCAATGCCAACTCAATCGCTGCTTTTCCCCAAAGGCGAATCTATCTGCATCTGGATTACCAAGGACGGCTAGTGAATAGAAGGGGGAGAGAGAGATGGACGGAGCAGCAGTTAGTGCTGCCACTGGGGTGATGGGTTCCCTCCTTGCCAAGCTATCTGCCTTGCTGGGAGAGGAATACAGGCTTCTGAAAGGTGTCAACTCTGACATTAGGTTCTTGAGAGATGAGCTGACTGCCATCAACAACTTTCTTATCAACATGTCAAATATGGAGGAGAACCTGGGTGAGCAGGAGAAGGAGTGGAGAAACAGGGTCCGAGAAATCGAGGATTGCATCGATTTATTCATGCGCAAATTCAATCATGGGGATGTGGATGCCAACTTTGTCCGCAGGACAGCAAAAAAGATAGGAATGTTATGGTCACGTCATGAAATTGCTAGCCAGATCCATCAACTTAAGGATTGTGTTAACGAAGAGAGTG ] [+] EMBL CB676440 [ TCCATTCCACCCCATCCTCGACTCGCAAGTACCCAGCTAAGATCAGGGAGCTCATCTCCAGGAGACGGCAATTAACAGGTAACTTCTCTAGTTCTCCTCGTCTCTTCTGCTCCATCTCCGGCGACCAGTGATTCTTGGTGTGCCACTACACTACTAGTGGTACTCCAACAAGTCTGACGGCCAATGCCAACTCAATCGCTGCTTTTCCCCAAAGGCGAATCTATCTGCATCTGGATTACCAAGGACGGCTAGTGAATAGAAGGGGGAGAGAGAGATGGACGGAGCAGCAGTTAGTGCTGCCACTGGGGTGATGGGTTCCCTCCTTGCCAAGCTATCTGCCTTGCTGGGAGAGGAATACAGGCTTCTGAAAGGTGTCAACTCTGACATTAGGTTCTTGAGAGATGAGCTGACTGCCATCAACAACTTTCTTATCAACATGTCAAATATGGAGGAGAACCTGGGTGAGCAGGAGAAGGAGTGGAGAAACAGGGTCCGAGAAATCGAGGATTGCATCGATTTATTCATGCGCAAATTCAATCATGGGGATGTGGATGCCAACTTTGTCCGCAGGACAGCAAAAAAGATAGGAATGTTATGGTCACGTCATGAAATTGCTAGCCAGATCCATCAACTTAAGGATTGTGTTAACGAAGAGAGTGCCCGTCGTTTGAGGTATAGATTTGGTGAAAGCAATGCCCGCATAGTTGAAATTGATCCTGGACTACCAGCACTCTATGTGGAAGCAGAGAAACTTGTTGGCATCCATGGCCCTATGGAGAAGATCATTG ] [-] EMBL CB678565 [ AAGGATTGTGTTAACGAAGAGAGTGCCCGTCGTTTGAGGTATAGATTTGGTGAAAGCAATGCCCGCATAGTTGAAATTGATCCTGGACTACCAGCACTTTATGTGGAAGCAGAGAAACTTGTTGGCATCCATGGCCCTATGGAGAAGATCATTGATTTGTTGACAAAACAGGATGGATCCTCACAACAGCTGAAAGTGGTTTCCATTGTGGGCTTTGGGGGCCTTGGCAAGACTACTCTTGCTAACCAAGTACTTAAAAAAATCAAGCATCAGTTTGATTGCACAGCTTTAGTATTTATTTCACGGAGTCCTGACATTAAGAAGATCTTATTTGTTTTGCTTAAAGATATGATCAACAAAAACAATTCTAATGATGAGAAGCACAAAAAAGTTGTTGGGATCAAGGCAGAAAAATCAGATGATGAGAAACAACTAATCAATAAGCTCAGAGAATACCTAACAAGTAGAAGGTGGGCACAAAAATAATTGGTTCTCTTTCATTTACTTTCCTGTTAAAGTCTTCATCTTAAATTTTTCAAGTCGTTTCCATTTGTTGAGGTCCCTTTTTCCTTTGCTGTACAATTTGATACAAGCCAATTCAAAACCCATGTAAATAGAATCATTACTCATATTTGTAATTAAAGGGTAAACTTGATAATATAAGACTTTGATGCCCT] [-] EMBL CB678526 [ ATGGATCCTCCCAACAGGTGAAAGTGGTTTCCATTGTGGGCTTTGGGGGCCTTGGCAAGACTACTCTTGTTAACCAAGTACTTAAAAAAATCAAGCATCAGTTTGATTGCCCAGCTTTAGTATTTATTTCACGGAGTCCTGACACTAAGAAGATGTTATTTGTTTTGCTTAAAGATATGATCAACAAAATCAATTCTAATGATGAGAAGCACAAAAAAGTTGTTGGGATCAAGGCAGAAAAATCAGATGATGAGAAACAAATAATCAATAAGCTCAGAGAATACCTAACAAGTAGAAGGTGGGCACAAAAATAATTGGTTCTCTTTCATTTACTTTCCTGTTAAAGTGTTCATGTTAAATTTTTCAAGTGGTTTCCATCTGTTGAGGTCCCTTTTTCCGGAGATGTGCAATTTGATACAAGCCAATTCAAAACCCATGTAAATAGAATCATTACTCATAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||