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Oryza sativa
cluster # 8175 cluster # 8175       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8175#0 length = 1186 sequences # 3  
consensus_8175#1 length = 931 sequences # 1  
consensus_8175#2 length = 747 sequences # 1  

consensusID : consensus_8175#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1186
fasta sequence
                              [CATCCGATTCAACTCGGACCACCAGATTTCTTCCTTCCTTCCTTGCAGAATCTTTCATTGTTCTTGTTGGGAGGAAGGAGACGAGGCGCGCGAGGCGGCGAGAGGGAGGAGGCATTCTAGCATATACAGATACAGAGCCAGGGGAGGTATGGAGGAGGGCCTTGCACGAGCACGACGATGCCAATAGAAGCTGTGGCGGTCGCTTCTTTACCGATGGCGTCGCGCAGCGCCGCCCTGTGCTTCTCCTCCGCCGCCGCTGCCCGGAGCCGGAGCAGGAGCCGGCACGGCAGGATGGCCGTCAGCTGCGACGCCGGGGCCTCAGATCTGCTCTATTCCTCTCTGGCTGCCAAGCTGCTTGGCCCTCCCACCAGCTTCGATGCCGGCAAGCTGACGGTAGAGTTCGCCCACAGCCACGGGAACAGCAGCTCCGGGTTCCCCAGAGCTTACACCCTCACCCACTGCGACTTCACCGCTAACCTCACCCTCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTCTTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTCGTCAGCGGCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAGGTACTACGTCTTCTCCAAGGAGCTGCCGCTGGTTCTCAAGGCAGTTGTTCATGGCGACGCATTGCTGTTCGCGGAGCAGCCGGAGCTGCTGGAGGCGAAGGTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAAGTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGACGACGCACAAGAGGCATGCGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAGGAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATGCATATCGGGAACCCCACACATTGTCTTTTTTTTGCTCTGCCTTGTGCGCATCAATTCCAATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTACCCACTCCACGATCAACAAAATGAGAAACGATTGCCTTTCCAAGCATTCTTCTTTAAATTAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK105982             [CATCCGATTCAACTCGGACCACCAGATTTCTTCCTTCCTTCCTTGCAGAATCTTTCATTGTTCTTGTTGGGAGGAAGGAGACGAGGCGCGCGAGGCGGCGAGAGGGAGGAGGCATTCTAGCATATACAGATACAGAGCCAGGGGAGGTATGGAGGAGGGCCTTGCACGAGCACGACGATGCCAATAGAAGCTGTGGCGGTCGCTTCTTTACCGATGGCGTCGCGCAGCGCCGCCCTGTGCTTCTCCTCCGCCGCCGCTGCCCGGAGCCGGAGCAGGAGCCGGCACGGCAGGATGGCCGTCAGCTGCGACGCCGGGGCCTCAGATCTGCTCTATTCCTCTCTGGCTGCCAAGCTGCTTGGCCCTCCCACCAGCTTCGATGCCGGCAAGCTGACGGTAGAGTTCGCCCACAGCCACGGGAACAGCAGCTCCGGGTTCCCCAGAGCTTACACCCTCACCCACTGCGACTTCACCGCTAACCTCACCCTCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTCTTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTCGTCAGCGGCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAGGTACTACGTCTTCTCCAAGGAGCTGCCGCTGGTTCTCAAGGCAGTTGTTCATGGCGACGCATTGCTGTTCGCGGAGCAGCCGGAGCTGCTGGAGGCGAAGGTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAAGTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGACGACGCACAAGAGGCATGCGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAGGAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATGCATATCGGGAACCCCACACATTGTCTTTTTTTTGCTCTGCCTTGTGCGCATCAATTCCAATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTACCCACTCCACGATCAACAAAATGAGAAACGATTGC                                                                                            ]
[+] EMBL AK105888             [                                                                 GTTGGGAGGAAGGAGACGAGGCGCGCGAGGCGGCGAGAGGGAGGAGGCATTCTAGCATATACAGATACAGAGCCAGGGGAGGTATGGAGGAGGGCCTTGCACGAGCACGACGATGCCAATAGAAGCTGTGGCGGTCGCTTCTTTACCGATGGCGTCGCGCAGCGCCGCCCTGTGCTTCTCCTCCGCCGCCGCTGCCCGGAGCCGGAGCAGGAGCCGGCACGGCAGGATGGCCGTCAGCTGCGACGCCGGGGCCTCAGATCTGCTCTATTCCTCTCTGGCTGCCAAGCTGCTTGGCCCTCCCACCAGCTTCGATGCCGGCAAGCTGACGGTAGAGTTCGCCCACAGCCACGGGAACAGCAGCTCCGGGTTCCCCAGAGCTTACACCCTCACCCACTGCGACTTCACCGCTAACCTCACCCTCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTCTTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTCGTCAGCGGCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAGGTACTACGTCTTCTCCAAGGAGCTGCCGCTGGTTCTCAAGGCAGTTGTTCATGGCGACGCATTGCTGTTCGCGGAGCAGCCGGAGCTGCTGGAGGCGAAGGTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAAGTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGACGACGCACAAGAGGCATGCGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAGGAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATGCATATCGGGAACCCCACACATTGTCTTCTTTTTGCTCTGCCTTGTGCGCATCAATTCCAATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTACCCACTCCACGATCAACAAAATGAGAAACGATTGCCTTTCCAAGC                                                                                  ]
[+] EMBL CF298467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTTGTGCGCATCAATTCCAATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTACCCACTCCACGATCAACAAAATGAGAAACGATTGCCTTTCCAAGCATTCTTCTTTAAATTAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8175#0 CATCCGATTCAACTCGGACCACCAGATTTCTTCCTTCCTTCCTTGCAGAATCTTTCATTG TTCTTGTTGGGAGGAAGGAGACGAGGCGCGCGAGGCGGCGAGAGGGAGGAGGCATTCTAG CATATACAGATACAGAGCCAGGGGAGGTATGGAGGAGGGCCTTGCACGAGCACGACGATG CCAATAGAAGCTGTGGCGGTCGCTTCTTTACCGATGGCGTCGCGCAGCGCCGCCCTGTGC TTCTCCTCCGCCGCCGCTGCCCGGAGCCGGAGCAGGAGCCGGCACGGCAGGATGGCCGTC AGCTGCGACGCCGGGGCCTCAGATCTGCTCTATTCCTCTCTGGCTGCCAAGCTGCTTGGC CCTCCCACCAGCTTCGATGCCGGCAAGCTGACGGTAGAGTTCGCCCACAGCCACGGGAAC AGCAGCTCCGGGTTCCCCAGAGCTTACACCCTCACCCACTGCGACTTCACCGCTAACCTC ACCCTCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTCTTC GCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTCGTC AGCGGCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAGGTACTACGTCTTCTCCAAG GAGCTGCCGCTGGTTCTCAAGGCAGTTGTTCATGGCGACGCATTGCTGTTCGCGGAGCAG CCGGAGCTGCTGGAGGCGAAGGTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAAGTAC AACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGACGACGCACAAG AGGCATGCGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAGGAGG AAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATGCATA TCGGGAACCCCACACATTGTCTTTTTTTTGCTCTGCCTTGTGCGCATCAATTCCAATTCT TTCATCCACCGGACACTTGACATGTATGTATAGTATGTACCCACTCCACGATCAACAAAA TGAGAAACGATTGCCTTTCCAAGCATTCTTCTTTAAATTAAAAAAAAAAAATAAAAAAAA AAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_8175#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 931
fasta sequence
                              [TGTTGGGAGGAAGGAGACGAGGCGCGCGAGGCGGCGAGAGGGAGGAGGCATTCTAGCATATACAGATACAGAGCCAGGGGAGGTATGGAGGAGGGCCTTGCACGAGCACGACGATGCCAATAGAAGCTGTGGCGGTCGCTTCTTTACCGATGGCGTCGCGCAGCGCCGCCCTGTGCTTCTCCTCCGCCGCCGCTGCCCGGAGCCGGAGCAGGAGCCGGCACGGCAGGATGGCCGTCAGCTGCGACGCCGGGGCCTCAGATCTGCTCTATTCCTCTCTGGCTGCCAAGCTGCTTGGCCCTCCCACCAGCTTCGATGCCGGCAAGCTGACGGTAGAGTTCGCCCACAGCCACGGGAACAGCAGCTCCGGGTTCCCCAGAGCTTACACCCTCACCCACTGCGACTTCACCGCTAACCTCACCCTCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTCTTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTCGTCAGCGGCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAGGTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAAGTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGACGACGCACAAGAGGCATGCGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAGGAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATGCATATCGGGAACCCCACACATTGTCTTTTTTTTTGCTCTGCCTTGTGCGCATCAATTCCAATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTACCCACTCCACGATCAACAAAATGAGAAACGATTGC]

[+] EMBL AK070001             [TGTTGGGAGGAAGGAGACGAGGCGCGCGAGGCGGCGAGAGGGAGGAGGCATTCTAGCATATACAGATACAGAGCCAGGGGAGGTATGGAGGAGGGCCTTGCACGAGCACGACGATGCCAATAGAAGCTGTGGCGGTCGCTTCTTTACCGATGGCGTCGCGCAGCGCCGCCCTGTGCTTCTCCTCCGCCGCCGCTGCCCGGAGCCGGAGCAGGAGCCGGCACGGCAGGATGGCCGTCAGCTGCGACGCCGGGGCCTCAGATCTGCTCTATTCCTCTCTGGCTGCCAAGCTGCTTGGCCCTCCCACCAGCTTCGATGCCGGCAAGCTGACGGTAGAGTTCGCCCACAGCCACGGGAACAGCAGCTCCGGGTTCCCCAGAGCTTACACCCTCACCCACTGCGACTTCACCGCTAACCTCACCCTCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTCTTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTCGTCAGCGGCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAGGTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAAGTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGACGACGCACAAGAGGCATGCGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAGGAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATGCATATCGGGAACCCCACACATTGTCTTTTTTTTTGCTCTGCCTTGTGCGCATCAATTCCAATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTACCCACTCCACGATCAACAAAATGAGAAACGATTGC]


>consensus_8175#1 TGTTGGGAGGAAGGAGACGAGGCGCGCGAGGCGGCGAGAGGGAGGAGGCATTCTAGCATA TACAGATACAGAGCCAGGGGAGGTATGGAGGAGGGCCTTGCACGAGCACGACGATGCCAA TAGAAGCTGTGGCGGTCGCTTCTTTACCGATGGCGTCGCGCAGCGCCGCCCTGTGCTTCT CCTCCGCCGCCGCTGCCCGGAGCCGGAGCAGGAGCCGGCACGGCAGGATGGCCGTCAGCT GCGACGCCGGGGCCTCAGATCTGCTCTATTCCTCTCTGGCTGCCAAGCTGCTTGGCCCTC CCACCAGCTTCGATGCCGGCAAGCTGACGGTAGAGTTCGCCCACAGCCACGGGAACAGCA GCTCCGGGTTCCCCAGAGCTTACACCCTCACCCACTGCGACTTCACCGCTAACCTCACCC TCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTCTTCGCCG AGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTCGTCAGCG GCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAGGTGTGGGTGCACTTCCACTCCAG CTCCAACGCTAAGTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGC CGAGACGACGCACAAGAGGCATGCGCTGGAGCAACTGCACAACGCAATCACCAAAGGCAC AAGAAGGCGTAGGAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCT TCTCCTTTGATGCATATCGGGAACCCCACACATTGTCTTTTTTTTTGCTCTGCCTTGTGC GCATCAATTCCAATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTACCCA CTCCACGATCAACAAAATGAGAAACGATTGC



consensusID : consensus_8175#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 747
fasta sequence
                              [CGTCTTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTCGTCAGCGGCGCCAACCTCATGCATGGCCTCGCCGCCGGCTTCAGGTACTACGTCTTCTCCAAGGAGCTGCCGCTGGTAAGCAATTATATATCGATATTTTGTACTACTATTACAGTAGTAGTAGTAGTAGTAGCAATTAGGAAGGTGAAATCAACTATGATAAGCTGAATGCAGGTTCTCAAGGCAGTTGTTCATGGCGACGCATTGCTGTTCGCGGAGCAGCCGGAGCTGCTGGAGGCGAAGGTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAAGTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGGCATGCCTTCCTTCTCTCTTCCCGAATTGCAAATTGCAAATGCAAATACCTGCTAGCTGAACTCAATGCAAATTCCAAATGCTTTGCGTTTGCAGACGACGCACAAGAGGCATGCGCTGCAACTGGACGGCCGGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAGGAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATGCATATCGGGAACCCCACACATTGTCTTTTTTTTGCTCTGCCTTGTGCGCATCAAATCCAATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTAGCCACTCCA]

[-] EMBL CB622841             [CGTCTTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTCGTCAGCGGCGCCAACCTCATGCATGGCCTCGCCGCCGGCTTCAGGTACTACGTCTTCTCCAAGGAGCTGCCGCTGGTAAGCAATTATATATCGATATTTTGTACTACTATTACAGTAGTAGTAGTAGTAGTAGCAATTAGGAAGGTGAAATCAACTATGATAAGCTGAATGCAGGTTCTCAAGGCAGTTGTTCATGGCGACGCATTGCTGTTCGCGGAGCAGCCGGAGCTGCTGGAGGCGAAGGTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAAGTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGGCATGCCTTCCTTCTCTCTTCCCGAATTGCAAATTGCAAATGCAAATACCTGCTAGCTGAACTCAATGCAAATTCCAAATGCTTTGCGTTTGCAGACGACGCACAAGAGGCATGCGCTGCAACTGGACGGCCGGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAGGAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATGCATATCGGGAACCCCACACATTGTCTTTTTTTTGCTCTGCCTTGTGCGCATCAAATCCAATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTAGCCACTCCA]


>consensus_8175#2 CGTCTTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTG CTTCGTCAGCGGCGCCAACCTCATGCATGGCCTCGCCGCCGGCTTCAGGTACTACGTCTT CTCCAAGGAGCTGCCGCTGGTAAGCAATTATATATCGATATTTTGTACTACTATTACAGT AGTAGTAGTAGTAGTAGCAATTAGGAAGGTGAAATCAACTATGATAAGCTGAATGCAGGT TCTCAAGGCAGTTGTTCATGGCGACGCATTGCTGTTCGCGGAGCAGCCGGAGCTGCTGGA GGCGAAGGTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAAGTACAACAGGCTCGAGTG CTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGGCATGCCTTCCTTCTCTCTTCCCGAA TTGCAAATTGCAAATGCAAATACCTGCTAGCTGAACTCAATGCAAATTCCAAATGCTTTG CGTTTGCAGACGACGCACAAGAGGCATGCGCTGCAACTGGACGGCCGGCTGGAGCAACTG CACAACGCAATCACCAAAGGCACAAGAAGGCGTAGGAGGAAGTGGTCTAGCCCGGACGCC ATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATGCATATCGGGAACCCCACACATTGTC TTTTTTTTGCTCTGCCTTGTGCGCATCAAATCCAATTCTTTCATCCACCGGACACTTGAC ATGTATGTATAGTATGTAGCCACTCCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8175#0      CATCCGATTCAACTCGGACCACCAGATTTCTTCCTTCCTTCCTTGCAGAATCTTTCATTG 60
consensus_8175#1      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
                                                                                  

consensus_8175#0      TTCTTGTTGGGAGGAAGGAGACGAGGCGCGCGAGGCGGCGAGAGGGAGGAGGCATTCTAG 120
consensus_8175#1      ----TGTTGGGAGGAAGGAGACGAGGCGCGCGAGGCGGCGAGAGGGAGGAGGCATTCTAG 56
consensus_8175#2      ------------------------------------------------------------
                                                                                  

consensus_8175#0      CATATACAGATACAGAGCCAGGGGAGGTATGGAGGAGGGCCTTGCACGAGCACGACGATG 180
consensus_8175#1      CATATACAGATACAGAGCCAGGGGAGGTATGGAGGAGGGCCTTGCACGAGCACGACGATG 116
consensus_8175#2      ------------------------------------------------------------
                                                                                  

consensus_8175#0      CCAATAGAAGCTGTGGCGGTCGCTTCTTTACCGATGGCGTCGCGCAGCGCCGCCCTGTGC 240
consensus_8175#1      CCAATAGAAGCTGTGGCGGTCGCTTCTTTACCGATGGCGTCGCGCAGCGCCGCCCTGTGC 176
consensus_8175#2      ----------------------CGTCTTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGG 38
                                            * ****  ****  *      *****  *  *  * * 

consensus_8175#0      TTCTCCTCCGCCGCCGCTGCCCGGAGCCGGAGCAGGAGCCGGCACGGCAGGATGGCCGTC 300
consensus_8175#1      TTCTCCTCCGCCGCCGCTGCCCGGAGCCGGAGCAGGAGCCGGCACGGCAGGATGGCCGTC 236
consensus_8175#2      GCATGGCCCTGCAC--GTGCACTGCTTCGTCAGCGGCGCCAACCTCAT-GCATGGCC-TC 94
                         *   **  * *   *** * *   **     ** ***  *      * ****** **

consensus_8175#0      AGCTGCGACGCCGGGGCCTCAGATCTGCTCTATTCCTCTCTGGCTGCCAAGCTGCT---T 357
consensus_8175#1      AGCTGCGACGCCGGGGCCTCAGATCTGCTCTATTCCTCTCTGGCTGCCAAGCTGCT---T 293
consensus_8175#2      GCCGCCGGCTTCAGGTACT-ACGTCTTCTCCAAGGAGCTGCCGCTGGTAAGCAATTATAT 153
                        *  ** *  * **  ** *  *** *** *     **   ****  ****   *   *

consensus_8175#0      GGCCCTCCCACCAGCTTCGATGCCGGCAAGCTGACGGTAGAGTTCGCCCACAGCCACGGG 417
consensus_8175#1      GGCCCTCCCACCAGCTTCGATGCCGGCAAGCTGACGGTAGAGTTCGCCCACAGCCACGGG 353
consensus_8175#2      ATCGATATTTTGTACTACTATTACAGTAG--TAGTAGTAGTAGTAGCAATTAGGAAGGTG 211
                        *  *        ** * **  * * *   *    ****   * **    **  * * *

consensus_8175#0      AACAGCAGCTCCGGGTTCCCCAGAGCTTACACCCTCACCCACTGCGACTTCACCGCTAAC 477
consensus_8175#1      AACAGCAGCTCCGGGTTCCCCAGAGCTTACACCCTCACCCACTGCGACTTCACCGCTAAC 413
consensus_8175#2      AA-ATCAACTATGATAAGCTGAATGCAGGTTCTCAAGGCAGTTG----TTCATGGCGA-- 264
                      ** * ** **  *     *  *  **     * *    *   **    ****  ** *  

consensus_8175#0      CTCACCCTCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTC 537
consensus_8175#1      CTCACCCTCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTC 473
consensus_8175#2      CGCA---TTGCTGTTCGCGGAGCAGCCGGAGCTGCTGGAGGCGAAGGTGTGGGTGCACTT 321
                      * **   * ** **   **   *   **  ** *   *  **    * * **  *   * 

consensus_8175#0      TTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTC 597
consensus_8175#1      TTCGCCGAGTGGAAGCAGCAGCAACAGCAGGAGGGCATGGCCCTGCACGTGCACTGCTTC 533
consensus_8175#2      CCACTCCAGCTCCAACGCTAAGTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGC 381
                           * **    * *   *   *** ****   *  **     *  *   **  *   *

consensus_8175#0      -GTCAGCGGCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAGGTACTACGTCTTCTC 656
consensus_8175#1      -GTCAGCGGCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAG--------------- 577
consensus_8175#2      TGCAAACGCCGAGGCATGCCTTCCTTCTCTCTTCCCGAATTGCAAA-------------- 427
                       *  * ** **       *** * *   ***  * *    * **                

consensus_8175#0      CAAGGAGCTGCCGCTGGTTCTCAAGGCAGTTGTTCATGGCGACGCATTGCTGTTCGCGGA 716
consensus_8175#1      ------------------------------------------------------------
consensus_8175#2      ------------------------------------------------------------
                                                                                  

consensus_8175#0      GCAGCCGGAGCTGCTGGAGGCGAAGGTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAA 776
consensus_8175#1      -------------------------GTGTGGGTGCACTTCCACTCCAGCTCCAACGCTAA 612
consensus_8175#2      -------------------------TTGCAAATGCAAATACCTGCTAGCTGAA---CTCA 459
                                                **    ****  * *   * ****  *   ** *

consensus_8175#0      GTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGACGACGCA 836
consensus_8175#1      GTACAACAGGCTCGAGTGCTGGGGTCCTCTCAGGGAGGCTGCAAACGCCGAGACGACGCA 672
consensus_8175#2      ATGCAA--ATTCCAAATGCTTTGCGTTTGCAGACGACGCACAAGAGGC--ATGCGCTGCA 515
                       * ***      * * ****  *    *      ** **   * * **  *  **  ***

consensus_8175#0      CAAGAGGCATGCGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAG 896
consensus_8175#1      CAAGAGGCATGCGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAG 732
consensus_8175#2      ACTGGACGGCCGGCTGGAGCAACTGCACAACGCAATCACCAAAGGCACAAGAAGGCGTAG 575
                         *        ************************************************

consensus_8175#0      GAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATG 956
consensus_8175#1      GAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATG 792
consensus_8175#2      GAGGAAGTGGTCTAGCCCGGACGCCATCTTCAGCGCCCTGCTCGCCCTTCTCCTTTGATG 635
                      ************************************************************

consensus_8175#0      CATATCGGGAACCCCACACATTGTCTTTTTTTT-GCTCTGCCTTGTGCGCATCAATTCCA 1015
consensus_8175#1      CATATCGGGAACCCCACACATTGTCTTTTTTTTTGCTCTGCCTTGTGCGCATCAATTCCA 852
consensus_8175#2      CATATCGGGAACCCCACACATTGTCTTTTTTTT-GCTCTGCCTTGTGCGCATCAAATCCA 694
                      ********************************* ********************* ****

consensus_8175#0      ATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTACCCACTCCACGATCAA 1075
consensus_8175#1      ATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTACCCACTCCACGATCAA 912
consensus_8175#2      ATTCTTTCATCCACCGGACACTTGACATGTATGTATAGTATGTAGCCACTCCA------- 747
                      ******************************************** ********       

consensus_8175#0      CAAAATGAGAAACGATTGCCTTTCCAAGCATTCTTCTTTAAATTAAAAAAAAAAAATAAA 1135
consensus_8175#1      CAAAATGAGAAACGATTGC----------------------------------------- 931
consensus_8175#2      ------------------------------------------------------------
                                                                                  

consensus_8175#0      AAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1186
consensus_8175#1      ---------------------------------------------------
consensus_8175#2      ---------------------------------------------------
                                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)