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Oryza sativa
cluster # 8177 cluster # 8177       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8177#0 length = 1668 sequences # 3  
consensus_8177#1 length = 1548 sequences # 1  
consensus_8177#2 length = 1045 sequences # 1  

consensusID : consensus_8177#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1668
fasta sequence
                              [TCGCGCTGTTCCCTCCTCGGCTCCTCGCGCAGGAGCACTGGCACGGACAGTGACATCGTCTTCCCTTCACCTCCTCGTCCTTCCCTCTCGTGGCATCGCATCGCATCGTGTCCTCTGCGACTGCGAGAGTGCGTGTGTGCAGCGCGCGCTCGTCGAGACAGACAGCAGCAGCAGTTGCTCTTTAATGCCGGTGCCTTGCTGAACAGAGCAAGGTCTCTCCAATGGCCTTGAGGCATTCAATGCGCCCGTAATCCATCTCTTGAACGGCCGTGTGTGTGTTCTTGGCGTGTTGGTGTGCGTGGATTGGGTGGGTGAGGAGGATGAACTATCTCAGGAGCCGGAGCCTCAAGCGGC-TCCTGTCTCTCGGTCGCCGGAGCAACAATTCCGATGAGTCCAATGACGAGTGCGTCTTCGTCGTCGA-CCAGCCGCCGCCGTCGAACAAGCCTACTTGGAGGTGCTTCTCGTATGAGGAGGTCAACAAGGCCACCAATGGCTTCCACCGAGACAATATGGTGGGGAGAGGCGGGTACGGCGAGGTGTACCGCGGCGTGCTGGAGGACGGGAGCGCCGTCGCGGTGAAGCGGCTGTCGCCGGCGGCGGCGGCGGACGAGAAGAAGGAGAAGGACTTCTTGACGGAGCTCGGCACGGTGGGGCATGTCCGGCACCCCAACGTCACGGCGCTGCTCGGCTGCTGCGTCGACCGGGGACTCCACCTCATCTTCGAGTTCTCCGCCCGCGGCTCCGTCTCCGCCAACCTCCACGACGAGAGGCTGCCGGTGATGCCGTGGCGGCGGCGCCACGGGATCGCCGTCGGCACCGCGAGGGGGCTCCGGTACCTCCACAAGGGTTGCGCGCGCCGGATCATACACCGCGACATCAAGGCGTCCAACGTCCTCCTCACCGCCGACTACGAGCCCCAGATTTCGGACTTCGGCCTCGCCCGGTGGCTGCCGTCGGAGTGGACGCACCACGCCATCGCGCCCATCGAGGGCACCTTCGGGTGCTTGGCGCCGGAGTACTTCACGCACGGCATCGTGGACGAGAAGACGGACGTGTTCGCCTTCGGCGTCTTCCTCCTCGAGCTCATCTCCGGGAGGAAGCCGGTGGACGGCTCCCACAAGAGCCTCCTCGCCTGGGCGAAGCCGTACCTGAACGACTGCGTGGCGCAGGGGCTCGTGGACCCGCGCCTCGGCGACGGCGGCTACGACGGCGCGCAGCTCAGGCGGCTCATGTTCGTCGCGTCGCTCTGCGTCCGGCCCGCCGCGGCGTGGCGGCCTACCATGACACAGGTCCTGGAGTTATAGGAGTCCGGCGAGATATCTCAAGATCAATGGCTGATGCCCGAGGAGGAGGAGGAAGACGAGTTTT-GGGATTTCGACGATCTCGACGACTTCGAGGACGACGACGACGACGATGATGACAACTATGATAAC-GACGATGAATCGGATTCTCCCTCGATATCGTCGTCAGCGTGC-AGCATCCACGCCAATGATTAGCCCCAAAATATTTGAGTCTGTCA-GTCTTGACAGAGTGCCCC-AATTGGTTTTGGTTTTTAGGGGATACTATGATCGATGGGATTATATTAGTGTACATAAACCACCTAGACAATAGTAAATTCAGAAAAGAAAAAAAAACTGTTCAGGCCCATGGTTTTGATCAAAAAAAAAA]

[+] EMBL AK111497             [TCGCGCTGTTCCCTCCTCGGCTCCTCGCGCAGGAGCACTGGCACGGACAGTGACATCGTCTTCCCTTCACCTCCTCGTCCTTCCCTCTCGTGGCATCGCATCGCATCGTGTCCTCTGCGACTGCGAGAGTGCGTGTGTGCAGCGCGCGCTCGTCGAGACAGACAGCAGCAGCAGTTGCTCTTTAATGCCGGTGCCTTGCTGAACAGAGCAAGGTCTCTCCAATGGCCTTGAGGCATTCAATGCGCCCGTAATCCATCTCTTGAACGGCCGTGTGTGTGTTCTTGGCGTGTTGGTGTGCGTGGATTGGGTGGGTGAGGAGGATGAACTATCTCAGGAGCCGGAGCCTCAAGCGGC TCCTGTCTCTCGGTCGCCGGAGCAACAATTCCGATGAGTCCAATGACGAGTGCGTCTTCGTCGTCGA CCAGCCGCCGCCGTCGAACAAGCCTACTTGGAGGTGCTTCTCGTATGAGGAGGTCAACAAGGCCACCAATGGCTTCCACCGAGACAATATGGTGGGGAGAGGCGGGTACGGCGAGGTGTACCGCGGCGTGCTGGAGGACGGGAGCGCCGTCGCGGTGAAGCGGCTGTCGCCGGCGGCGGCGGCGGACGAGAAGAAGGAGAAGGACTTCTTGACGGAGCTCGGCACGGTGGGGCATGTCCGGCACCCCAACGTCACGGCGCTGCTCGGCTGCTGCGTCGACCGGGGACTCCACCTCATCTTCGAGTTCTCCGCCCGCGGCTCCGTCTCCGCCAACCTCCACGACGAGAGGCTGCCGGTGATGCCGTGGCGGCGGCGCCACGGGATCGCCGTCGGCACCGCGAGGGGGCTCCGGTACCTCCACAAGGGTTGCGCGCGCCGGATCATACACCGCGACATCAAGGCGTCCAACGTCCTCCTCACCGCCGACTACGAGCCCCAGATTTCGGACTTCGGCCTCGCCCGGTGGCTGCCGTCGGAGTGGACGCACCACGCCATCGCGCCCATCGAGGGCACCTTCGGGTGCTTGGCGCCGGAGTACTTCACGCACGGCATCGTGGACGAGAAGACGGACGTGTTCGCCTTCGGCGTCTTCCTCCTCGAGCTCATCTCCGGGAGGAAGCCGGTGGACGGCTCCCACAAGAGCCTCCTCGCCTGGGCGAAGCCGTACCTGAACGACTGCGTGGCGCAGGGGCTCGTGGACCCGCGCCTCGGCGACGGCGGCTACGACGGCGCGCAGCTCAGGCGGCTCATGTTCGTCGCGTCGCTCTGCGTCCGGCCCGCCGCGGCGTGGCGGCCTACCATGACACAGGTCCTGGAGTTATAGGAGTCCGGCGAGATATCTCAAGATCAATGGCTGATGCCCGAGGAGGAGGAGGAAGACGAGTTTT GGGATTTCGACGATCTCGACGACTTCGAGGACGACGACGACGACGATGATGACAACTATGATAAC GACGATGAATCGGATTCTCCCTCGATATCGTCGTCAGCGTGC AGCATCCACGCCAATGATTAGCCCCAAAATATTTGAGTCTGTCA GTCTTGACAGAGTGCCCC AATTGGTTTTGGTTTTTAGGGGATACTATGATCGATGGGATTATATTAGTGTACATAAACCACCTAGACAATAGTAAATTCAGAAAAGAAAAAAAAACTGTTCAGGCCCATGGTT                ]
[+] EMBL C73913               [                      CCTCGCGCAGGAGCACTGGCACGGACAGTGACATCGTCTTCCCTTCACCTCCTCGTCCTTCCCTCTCGTGGCATCGCATCGCATCGTGTCCTCTGCGACTGCGAGAGTGCGTGTGTGCAGCGCGCGCTCGTCGAGACAGACAGCAGCAGCAGTTGCTCTTTAATGCCGGTGCCTTGCTGAACAGAGCAAGGTCTCTCCAATGGCCTTGAGGCATTCAATGCGCCCGTAATCCATCTCTTGAACGGCCGTGTGTGTGTTCTTGGCGTGTTGGTGTGCGTGGATTGGGTGGGTGAGGAGGATGAACTATCTCAGGAGCCGGAGCCTCAAGCGGCTTCCTGTCTCTCGGTCGCCGGAGCAACAATTCCGATGAGTCCAATGACGAGTGCGTCTTCGTCGTCGACCCAGCCGCCGNCGTCGGACAAGCCTACTTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU172761             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGAGTTTTGGGGATTTCGACGATCTCGACGACTTCGAGGACGACGNCGCCGNCGATGATGACAACTATGATAACGGNCGATGAATCGGATTCTCCCTCGATATCGTCGTCAGCGTGCAAGCATCCACGCCAATGATTAGCCCCAAAATATTTGAGTCTGTCANGTCTTGACAGAGTGCCCCTAATTGGTTTTGGTTTTTAGGGGATACTATGATCGATGGGATTATATTAGTGTACATAAACCACCTAGACAATAGTAAATTCAGAAAAGAAAAAAAAACTGTTCAGGCCCATGGTTTTGATCAAAAAAAAAA]


>consensus_8177#0 TCGCGCTGTTCCCTCCTCGGCTCCTCGCGCAGGAGCACTGGCACGGACAGTGACATCGTC TTCCCTTCACCTCCTCGTCCTTCCCTCTCGTGGCATCGCATCGCATCGTGTCCTCTGCGA CTGCGAGAGTGCGTGTGTGCAGCGCGCGCTCGTCGAGACAGACAGCAGCAGCAGTTGCTC TTTAATGCCGGTGCCTTGCTGAACAGAGCAAGGTCTCTCCAATGGCCTTGAGGCATTCAA TGCGCCCGTAATCCATCTCTTGAACGGCCGTGTGTGTGTTCTTGGCGTGTTGGTGTGCGT GGATTGGGTGGGTGAGGAGGATGAACTATCTCAGGAGCCGGAGCCTCAAGCGGCTCCTGT CTCTCGGTCGCCGGAGCAACAATTCCGATGAGTCCAATGACGAGTGCGTCTTCGTCGTCG ACCAGCCGCCGCCGTCGAACAAGCCTACTTGGAGGTGCTTCTCGTATGAGGAGGTCAACA AGGCCACCAATGGCTTCCACCGAGACAATATGGTGGGGAGAGGCGGGTACGGCGAGGTGT ACCGCGGCGTGCTGGAGGACGGGAGCGCCGTCGCGGTGAAGCGGCTGTCGCCGGCGGCGG CGGCGGACGAGAAGAAGGAGAAGGACTTCTTGACGGAGCTCGGCACGGTGGGGCATGTCC GGCACCCCAACGTCACGGCGCTGCTCGGCTGCTGCGTCGACCGGGGACTCCACCTCATCT TCGAGTTCTCCGCCCGCGGCTCCGTCTCCGCCAACCTCCACGACGAGAGGCTGCCGGTGA TGCCGTGGCGGCGGCGCCACGGGATCGCCGTCGGCACCGCGAGGGGGCTCCGGTACCTCC ACAAGGGTTGCGCGCGCCGGATCATACACCGCGACATCAAGGCGTCCAACGTCCTCCTCA CCGCCGACTACGAGCCCCAGATTTCGGACTTCGGCCTCGCCCGGTGGCTGCCGTCGGAGT GGACGCACCACGCCATCGCGCCCATCGAGGGCACCTTCGGGTGCTTGGCGCCGGAGTACT TCACGCACGGCATCGTGGACGAGAAGACGGACGTGTTCGCCTTCGGCGTCTTCCTCCTCG AGCTCATCTCCGGGAGGAAGCCGGTGGACGGCTCCCACAAGAGCCTCCTCGCCTGGGCGA AGCCGTACCTGAACGACTGCGTGGCGCAGGGGCTCGTGGACCCGCGCCTCGGCGACGGCG GCTACGACGGCGCGCAGCTCAGGCGGCTCATGTTCGTCGCGTCGCTCTGCGTCCGGCCCG CCGCGGCGTGGCGGCCTACCATGACACAGGTCCTGGAGTTATAGGAGTCCGGCGAGATAT CTCAAGATCAATGGCTGATGCCCGAGGAGGAGGAGGAAGACGAGTTTTGGGATTTCGACG ATCTCGACGACTTCGAGGACGACGACGACGACGATGATGACAACTATGATAACGACGATG AATCGGATTCTCCCTCGATATCGTCGTCAGCGTGCAGCATCCACGCCAATGATTAGCCCC AAAATATTTGAGTCTGTCAGTCTTGACAGAGTGCCCCAATTGGTTTTGGTTTTTAGGGGA TACTATGATCGATGGGATTATATTAGTGTACATAAACCACCTAGACAATAGTAAATTCAG AAAAGAAAAAAAAACTGTTCAGGCCCATGGTTTTGATCAAAAAAAAAA



consensusID : consensus_8177#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1548
fasta sequence
                              [CCCGCGAAACGCCTCGTCGCGTTCATATTTGCTCACGGCTCGCGCGGCACTCGCGAGAGCACCTCGGCGTTAGTACCCATCAATGCCTCCCTCCTCCTCCTCCTCCGCCACCACCACCAGCTCGCCGTCTCGTCTCCCTCCTCCGCTTCGCCTCCTCTGATCACCTCGCTCGCCGGCGACGCCGCGATCGCCACCGCACCGCAGGGCATTGTGTCGTCGAGGGGAGAGATGAGGCCTCTGTACCTGCGCAGCAGCGGCAGCTTCAAGAAGCTGCTCCTCTCCATCAGCCACCGCGGCGCCAAGAACGGCAATGGCGACGCCGCCGCCAAGGAGAGATACACGCCCGCCGCCGCCGCGGCGGCGCCGGAGTCGCCGCGGAAGCCGGCGTGGCGGTGCTTCTCCTACGAGGAGATCCACCGCGCCACGAACGCGTTCCACGAGGGCAACCTGGTGGGGAAGGGCGGGTCGTCGGAGGTGTACCGCGGCGAGCTCCCCGACGGGCGGGCCGTGGCGGTGAAGCGGCTGATGGGCGCGTGGGCGTGCGAGCGGCGGGAGCGCGACTTCCTGGCGGAGCTCGGCACGGTGGGGCACGCGCGCCACCCCAACGTGTGCGCCCTCCTCGGCTGCTGCGTCGACCGCGACCTCTACCTCGTCTTCCACTTCTCCGGCCGCGGCTCCGTCTCCGCCAACCTCCACGACGAGAAGAAGGCGCCGGCGATGGGGTGGGCGGTGCGGCGCGCCATTGCCGTCGGCACGGCGAGGGGGCTGGAGTACCTGCACAAGGGGTGCCAGAGGAGGATCATCCACAGGGACATCAAGGCATCCAACGTGCTTCTCACCGACGACTTCCAGCCTCAGATTTCCGATTTCGGGCTCGCCAAGTGGCTGCCGTCGGAGTGGACGCACCGGGCGATCGCCCCGATCGAAGGAACATTCGGGTGTTTGGCACCGGAGTACTACACGCATGGCATCGTCGACGAGAAGACGGACGTGTTCGCGTTCGGCGTCTTCCTCCTGGAGATCATGACCGGGAGAAAGCCGGTGGATGGCAGCCACAAGAGCTTGCTCAGCTGGGCGAGGCCGTTCCTGAACGAGGGGAGGATCGAGTCGCTGGTGGATCCGAGGATCGGCGGCGACTACGACGGCGAGGAGGCGCGGCGGCTGGCGTTCGTGGCGTCGCTGTGCATCCGCTCGTCGGCGAAGTGGAGGCCATCCATGACCGAGGTGCTGGAGCTGCTGGAAGGCGTCGAGATCCGGCAAGAACGGTGGACGATGCCCGAGGCAGTGGAGGACGACGACGACGAGGAGCTATGGAGATTCGATGACCTGGATGACGAAGACGACGAAGATGAAGAGGAGTTCAACACTGCATCCCCATCTTCTTGCTCATCATCTTTGAGCAATTAGTAGTTAGTAATAGTATCTAAGATTGTGAGTAAGCTTGTGATGTTGTTACAAGATGAAATTTTTGATAGTTACTCTCCACTGGGCCCACTTGTAAATAGAAAGGATTTTCATCTTATCATCATCCAACAGGCTATGAAAAGC]

[+] EMBL AK105794             [CCCGCGAAACGCCTCGTCGCGTTCATATTTGCTCACGGCTCGCGCGGCACTCGCGAGAGCACCTCGGCGTTAGTACCCATCAATGCCTCCCTCCTCCTCCTCCTCCGCCACCACCACCAGCTCGCCGTCTCGTCTCCCTCCTCCGCTTCGCCTCCTCTGATCACCTCGCTCGCCGGCGACGCCGCGATCGCCACCGCACCGCAGGGCATTGTGTCGTCGAGGGGAGAGATGAGGCCTCTGTACCTGCGCAGCAGCGGCAGCTTCAAGAAGCTGCTCCTCTCCATCAGCCACCGCGGCGCCAAGAACGGCAATGGCGACGCCGCCGCCAAGGAGAGATACACGCCCGCCGCCGCCGCGGCGGCGCCGGAGTCGCCGCGGAAGCCGGCGTGGCGGTGCTTCTCCTACGAGGAGATCCACCGCGCCACGAACGCGTTCCACGAGGGCAACCTGGTGGGGAAGGGCGGGTCGTCGGAGGTGTACCGCGGCGAGCTCCCCGACGGGCGGGCCGTGGCGGTGAAGCGGCTGATGGGCGCGTGGGCGTGCGAGCGGCGGGAGCGCGACTTCCTGGCGGAGCTCGGCACGGTGGGGCACGCGCGCCACCCCAACGTGTGCGCCCTCCTCGGCTGCTGCGTCGACCGCGACCTCTACCTCGTCTTCCACTTCTCCGGCCGCGGCTCCGTCTCCGCCAACCTCCACGACGAGAAGAAGGCGCCGGCGATGGGGTGGGCGGTGCGGCGCGCCATTGCCGTCGGCACGGCGAGGGGGCTGGAGTACCTGCACAAGGGGTGCCAGAGGAGGATCATCCACAGGGACATCAAGGCATCCAACGTGCTTCTCACCGACGACTTCCAGCCTCAGATTTCCGATTTCGGGCTCGCCAAGTGGCTGCCGTCGGAGTGGACGCACCGGGCGATCGCCCCGATCGAAGGAACATTCGGGTGTTTGGCACCGGAGTACTACACGCATGGCATCGTCGACGAGAAGACGGACGTGTTCGCGTTCGGCGTCTTCCTCCTGGAGATCATGACCGGGAGAAAGCCGGTGGATGGCAGCCACAAGAGCTTGCTCAGCTGGGCGAGGCCGTTCCTGAACGAGGGGAGGATCGAGTCGCTGGTGGATCCGAGGATCGGCGGCGACTACGACGGCGAGGAGGCGCGGCGGCTGGCGTTCGTGGCGTCGCTGTGCATCCGCTCGTCGGCGAAGTGGAGGCCATCCATGACCGAGGTGCTGGAGCTGCTGGAAGGCGTCGAGATCCGGCAAGAACGGTGGACGATGCCCGAGGCAGTGGAGGACGACGACGACGAGGAGCTATGGAGATTCGATGACCTGGATGACGAAGACGACGAAGATGAAGAGGAGTTCAACACTGCATCCCCATCTTCTTGCTCATCATCTTTGAGCAATTAGTAGTTAGTAATAGTATCTAAGATTGTGAGTAAGCTTGTGATGTTGTTACAAGATGAAATTTTTGATAGTTACTCTCCACTGGGCCCACTTGTAAATAGAAAGGATTTTCATCTTATCATCATCCAACAGGCTATGAAAAGC]


>consensus_8177#1 CCCGCGAAACGCCTCGTCGCGTTCATATTTGCTCACGGCTCGCGCGGCACTCGCGAGAGC ACCTCGGCGTTAGTACCCATCAATGCCTCCCTCCTCCTCCTCCTCCGCCACCACCACCAG CTCGCCGTCTCGTCTCCCTCCTCCGCTTCGCCTCCTCTGATCACCTCGCTCGCCGGCGAC GCCGCGATCGCCACCGCACCGCAGGGCATTGTGTCGTCGAGGGGAGAGATGAGGCCTCTG TACCTGCGCAGCAGCGGCAGCTTCAAGAAGCTGCTCCTCTCCATCAGCCACCGCGGCGCC AAGAACGGCAATGGCGACGCCGCCGCCAAGGAGAGATACACGCCCGCCGCCGCCGCGGCG GCGCCGGAGTCGCCGCGGAAGCCGGCGTGGCGGTGCTTCTCCTACGAGGAGATCCACCGC GCCACGAACGCGTTCCACGAGGGCAACCTGGTGGGGAAGGGCGGGTCGTCGGAGGTGTAC CGCGGCGAGCTCCCCGACGGGCGGGCCGTGGCGGTGAAGCGGCTGATGGGCGCGTGGGCG TGCGAGCGGCGGGAGCGCGACTTCCTGGCGGAGCTCGGCACGGTGGGGCACGCGCGCCAC CCCAACGTGTGCGCCCTCCTCGGCTGCTGCGTCGACCGCGACCTCTACCTCGTCTTCCAC TTCTCCGGCCGCGGCTCCGTCTCCGCCAACCTCCACGACGAGAAGAAGGCGCCGGCGATG GGGTGGGCGGTGCGGCGCGCCATTGCCGTCGGCACGGCGAGGGGGCTGGAGTACCTGCAC AAGGGGTGCCAGAGGAGGATCATCCACAGGGACATCAAGGCATCCAACGTGCTTCTCACC GACGACTTCCAGCCTCAGATTTCCGATTTCGGGCTCGCCAAGTGGCTGCCGTCGGAGTGG ACGCACCGGGCGATCGCCCCGATCGAAGGAACATTCGGGTGTTTGGCACCGGAGTACTAC ACGCATGGCATCGTCGACGAGAAGACGGACGTGTTCGCGTTCGGCGTCTTCCTCCTGGAG ATCATGACCGGGAGAAAGCCGGTGGATGGCAGCCACAAGAGCTTGCTCAGCTGGGCGAGG CCGTTCCTGAACGAGGGGAGGATCGAGTCGCTGGTGGATCCGAGGATCGGCGGCGACTAC GACGGCGAGGAGGCGCGGCGGCTGGCGTTCGTGGCGTCGCTGTGCATCCGCTCGTCGGCG AAGTGGAGGCCATCCATGACCGAGGTGCTGGAGCTGCTGGAAGGCGTCGAGATCCGGCAA GAACGGTGGACGATGCCCGAGGCAGTGGAGGACGACGACGACGAGGAGCTATGGAGATTC GATGACCTGGATGACGAAGACGACGAAGATGAAGAGGAGTTCAACACTGCATCCCCATCT TCTTGCTCATCATCTTTGAGCAATTAGTAGTTAGTAATAGTATCTAAGATTGTGAGTAAG CTTGTGATGTTGTTACAAGATGAAATTTTTGATAGTTACTCTCCACTGGGCCCACTTGTA AATAGAAAGGATTTTCATCTTATCATCATCCAACAGGCTATGAAAAGC



consensusID : consensus_8177#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1045
fasta sequence
                              [CATCAATGCCTCCCTCCTCCTCCTCCTCCGCCACCACCACCAGCTCGCCGTCTCGTCTCCCTCCTCCGCTTCGCCTCCTCTGATCACCTCGCTCGCCGGCGACGCCGCGATCGCCACCGCACCGCAGGGCATTGTGTCGTCGAGGGGAGAGATGAGGCCTCTGTACCTGCGCAGCAGCGGCAGCTTCAAGAAGCTGCTCCTCTCCATCAGCCACCGCGGCGCCAAGAACGGCAATGGCGACGCCGCCGCCAAGGAGAGATACACGCCCGCCGCCGCCGCGGCGGCGCCGGAGTCGCCGCGGAAGCCGGCGTGGCGGTGCTTCTCCTACGAGGAGATCCACCGCGCCACGAACGCGTTCCACGAGGGCAACCTGGTGGGGAAGGGCGGGTCGTCGGAGGTGTACCGCGGCGAGCTCCCCGACGGGCGGGCCGTGGCGGTGAAGCGGCTGATGGGCGCGTGGGCGTGCGAGCGGCGGGAGCGCGACTTCCTGGCGGAGCTCGGCACGGTGGGGCACGCGCGCCACCCCAACGTGTGCGCCCTCCTCGGCTGCTGCGTCGACCGCGACCTCTACCTCGTCTTCCACTTCTCCGGCCGCGGCTCCGTCTCCGCCAACCTCCACGGTACCAGCGACACGAACGCGACACCTAACAGCAACAGCACGAACGCGCCGCCATTAATGGCGTTTTGACGTTTCTTGATTTGATTTGATTGCTGCATCGCAGACGAGAAGAAGGCGCCGGCGATGGGGTGGGCGGTGCGGCGCGCCATTGCCGTCGGCACGGCGAGGGGGCTGGAGTACCTGCACAAGGGGTGCCAGAGGAGGATCATCCACAGGGACATCAAGGCATCCAACGTGCTTCTCACCGACGACTTCCAGCCTCAGGTCAGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAACAAAGATTAGCATGGCCACTACGCAAGGATGACACGCACAAATGGAGAAATAATCCAAATTTTTTTAGGAGCTGTATTTTTCTCATGCTATATTTAATGAATAAGCACAATCTTGTGCT]

[+] EMBL AK059727             [CATCAATGCCTCCCTCCTCCTCCTCCTCCGCCACCACCACCAGCTCGCCGTCTCGTCTCCCTCCTCCGCTTCGCCTCCTCTGATCACCTCGCTCGCCGGCGACGCCGCGATCGCCACCGCACCGCAGGGCATTGTGTCGTCGAGGGGAGAGATGAGGCCTCTGTACCTGCGCAGCAGCGGCAGCTTCAAGAAGCTGCTCCTCTCCATCAGCCACCGCGGCGCCAAGAACGGCAATGGCGACGCCGCCGCCAAGGAGAGATACACGCCCGCCGCCGCCGCGGCGGCGCCGGAGTCGCCGCGGAAGCCGGCGTGGCGGTGCTTCTCCTACGAGGAGATCCACCGCGCCACGAACGCGTTCCACGAGGGCAACCTGGTGGGGAAGGGCGGGTCGTCGGAGGTGTACCGCGGCGAGCTCCCCGACGGGCGGGCCGTGGCGGTGAAGCGGCTGATGGGCGCGTGGGCGTGCGAGCGGCGGGAGCGCGACTTCCTGGCGGAGCTCGGCACGGTGGGGCACGCGCGCCACCCCAACGTGTGCGCCCTCCTCGGCTGCTGCGTCGACCGCGACCTCTACCTCGTCTTCCACTTCTCCGGCCGCGGCTCCGTCTCCGCCAACCTCCACGGTACCAGCGACACGAACGCGACACCTAACAGCAACAGCACGAACGCGCCGCCATTAATGGCGTTTTGACGTTTCTTGATTTGATTTGATTGCTGCATCGCAGACGAGAAGAAGGCGCCGGCGATGGGGTGGGCGGTGCGGCGCGCCATTGCCGTCGGCACGGCGAGGGGGCTGGAGTACCTGCACAAGGGGTGCCAGAGGAGGATCATCCACAGGGACATCAAGGCATCCAACGTGCTTCTCACCGACGACTTCCAGCCTCAGGTCAGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAACAAAGATTAGCATGGCCACTACGCAAGGATGACACGCACAAATGGAGAAATAATCCAAATTTTTTTAGGAGCTGTATTTTTCTCATGCTATATTTAATGAATAAGCACAATCTTGTGCT]


>consensus_8177#2 CATCAATGCCTCCCTCCTCCTCCTCCTCCGCCACCACCACCAGCTCGCCGTCTCGTCTCC CTCCTCCGCTTCGCCTCCTCTGATCACCTCGCTCGCCGGCGACGCCGCGATCGCCACCGC ACCGCAGGGCATTGTGTCGTCGAGGGGAGAGATGAGGCCTCTGTACCTGCGCAGCAGCGG CAGCTTCAAGAAGCTGCTCCTCTCCATCAGCCACCGCGGCGCCAAGAACGGCAATGGCGA CGCCGCCGCCAAGGAGAGATACACGCCCGCCGCCGCCGCGGCGGCGCCGGAGTCGCCGCG GAAGCCGGCGTGGCGGTGCTTCTCCTACGAGGAGATCCACCGCGCCACGAACGCGTTCCA CGAGGGCAACCTGGTGGGGAAGGGCGGGTCGTCGGAGGTGTACCGCGGCGAGCTCCCCGA CGGGCGGGCCGTGGCGGTGAAGCGGCTGATGGGCGCGTGGGCGTGCGAGCGGCGGGAGCG CGACTTCCTGGCGGAGCTCGGCACGGTGGGGCACGCGCGCCACCCCAACGTGTGCGCCCT CCTCGGCTGCTGCGTCGACCGCGACCTCTACCTCGTCTTCCACTTCTCCGGCCGCGGCTC CGTCTCCGCCAACCTCCACGGTACCAGCGACACGAACGCGACACCTAACAGCAACAGCAC GAACGCGCCGCCATTAATGGCGTTTTGACGTTTCTTGATTTGATTTGATTGCTGCATCGC AGACGAGAAGAAGGCGCCGGCGATGGGGTGGGCGGTGCGGCGCGCCATTGCCGTCGGCAC GGCGAGGGGGCTGGAGTACCTGCACAAGGGGTGCCAGAGGAGGATCATCCACAGGGACAT CAAGGCATCCAACGTGCTTCTCACCGACGACTTCCAGCCTCAGGTCAGTCTCTTCGGAGA CATCCGATAAAATTGGAACGATACAACAAAGATTAGCATGGCCACTACGCAAGGATGACA CGCACAAATGGAGAAATAATCCAAATTTTTTTAGGAGCTGTATTTTTCTCATGCTATATT TAATGAATAAGCACAATCTTGTGCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8177#1      -----------------------------------------------------CCCGCGA 7
consensus_8177#2      ------------------------------------------------------------
consensus_8177#0      TCGCGCTGTTCCCTCCTCGGCTCCTCGCGCAGGAGCACTGGCACGGACAGTGACATCGTC 60
                                                                                  

consensus_8177#1      AACGCCTCGTCGCGTTCATATTTGCTCACGGCTCGCGCGGCACTCGCGAGAGCACCTCGG 67
consensus_8177#2      ------------------------------------------------------------
consensus_8177#0      TTCCCTTCACCTCCTCGTCCTTCCCTCTCGTGGCATCGCATCGCATCGTGTCCTCTGCGA 120
                                                                                  

consensus_8177#1      C-GTTAGTACCCATCAATGCCTCCCTCCTCCTCCTCCTCCGCCACCACCACCAGCTCGCC 126
consensus_8177#2      -----------CATCAATGCCTCCCTCCTCCTCCTCCTCCGCCACCACCACCAGCTCGCC 49
consensus_8177#0      CTGCGAGAGTGCGTGTGTGCAGCGCGCGCTCGTCGAGACAGACAGCAGCAGCAG-TTGCT 179
                                 * *   ***  * * *   *  *    * * ** ** ** *** * ** 

consensus_8177#1      GTCTCGTCTCCCTCCTCCGCTTCGCCTCCTCTGATCACCTCGCTCGCCGGCGACGCCGCG 186
consensus_8177#2      GTCTCGTCTCCCTCCTCCGCTTCGCCTCCTCTGATCACCTCGCTCGCCGGCGACGCCGCG 109
consensus_8177#0      CTTTAATGCCGGTGCCTTGCTGAACAGAGCAAGGTCTCTCCAATGGCCT-TGAGGCATTC 238
                       * *  *  *  * *   ***   *       * ** *  *  * ***   ** **    

consensus_8177#1      ATCGCCACCGCACCGCAGGGCATTGTGTCGTCGAGGGGAGAGATGAGGCCTCTGTACCTG 246
consensus_8177#2      ATCGCCACCGCACCGCAGGGCATTGTGTCGTCGAGGGGAGAGATGAGGCCTCTGTACCTG 169
consensus_8177#0      AATGCGCCCGTAATCCATCTC-TTGAACGGCCGTGTGTGTGTTCTTGGCGTGTTGGTGTG 297
                      *  **  *** *   **   * ***    * ** * *         *** * *     **

consensus_8177#1      CGCAGCAGCGGCAGCTTCAAGAAGCTGCTCCTCTCCATCAGCCA---CC----GCGGCGC 299
consensus_8177#2      CGCAGCAGCGGCAGCTTCAAGAAGCTGCTCCTCTCCATCAGCCA---CC----GCGGCGC 222
consensus_8177#0      CGTGG-ATTGGGTGGGTGAGGAGGATGAACTATCTCAGGAGCCGGAGCCTCAAGCGGCTC 356
                      **  * *  **  *  * * ** * **  *     **  ****    **    ***** *

consensus_8177#1      CAAG-----AACGGCAATGGCGACGCCGCCGCCAAGGAGAGATACACGCCCGCCGCCGCC 354
consensus_8177#2      CAAG-----AACGGCAATGGCGACGCCGCCGCCAAGGAGAGATACACGCCCGCCGCCGCC 277
consensus_8177#0      CTGTCTCTCGGTCGCCGGAGCAACAATTCCGATGAGTCCAATGACGAGTGCGTCTTCGTC 416
                      *            **    ** **    ***   **   *   **  *  ** *  ** *

consensus_8177#1      GCGGCGGCGCCGGAGTCGCCGCGGAAGCCGGCGTGGCGGTGCTTCTCCTACGAGGAGATC 414
consensus_8177#2      GCGGCGGCGCCGGAGTCGCCGCGGAAGCCGGCGTGGCGGTGCTTCTCCTACGAGGAGATC 337
consensus_8177#0      GTCGACCAGCCGCCGCCGTCGAACAAGCCTACTTGGAGGTGCTTCTCGTATGAGGAGGTC 476
                      *  *    ****  * ** **   *****  * *** ********** ** ****** **

consensus_8177#1      CACCGCGCCACGAACGCGTTCCACGAGGGCAACCTGGTGGGGAAGGGCGGGTCGTCGGAG 474
consensus_8177#2      CACCGCGCCACGAACGCGTTCCACGAGGGCAACCTGGTGGGGAAGGGCGGGTCGTCGGAG 397
consensus_8177#0      AACAAGGCCACCAATGGCTTCCACCGAGACAATATGGTGGGGAGAGGCGGGTACGGCGAG 536
                       **   ***** ** *  ******   * ***  *********  *******     ***

consensus_8177#1      GTGTACCGCGGCGAGCTCCCCGACGGGCGGGCCGTGGCGGTGAAGCGGCTGATG--GGCG 532
consensus_8177#2      GTGTACCGCGGCGAGCTCCCCGACGGGCGGGCCGTGGCGGTGAAGCGGCTGATG--GGCG 455
consensus_8177#0      GTGTACCGCGGCGTGCTGGAGGACGGGAGCGCCGTCGCGGTGAAGCGGCTGTCGCCGGCG 596
                      ************* ***    ****** * ***** ***************  *  ****

consensus_8177#1      -CGTGGGCGTGCGAGCGGCGGGAGCGCGACTTCCTGGCGGAGCTCGGCACGGTGGGGCAC 591
consensus_8177#2      -CGTGGGCGTGCGAGCGGCGGGAGCGCGACTTCCTGGCGGAGCTCGGCACGGTGGGGCAC 514
consensus_8177#0      GCGGCGGCGGACGAGAAGAAGGAGAAGGACTTCTTGACGGAGCTCGGCACGGTGGGGCAT 656
                       **  ****  ****  *  ****   ****** ** ********************** 

consensus_8177#1      GCGCGCCACCCCAACGTGTGCGCCCTCCTCGGCTGCTGCGTCGACCGCGACCTCTACCTC 651
consensus_8177#2      GCGCGCCACCCCAACGTGTGCGCCCTCCTCGGCTGCTGCGTCGACCGCGACCTCTACCTC 574
consensus_8177#0      GTCCGGCACCCCAACGTCACGGCGCTGCTCGGCTGCTGCGTCGACCGGGGACTCCACCTC 716
                      *  ** ***********    ** ** ******************** *  *** *****

consensus_8177#1      GTCTTCCACTTCTCCGGCCGCGGCTCCGTCTCCGCCAACCTCCACG-------------- 697
consensus_8177#2      GTCTTCCACTTCTCCGGCCGCGGCTCCGTCTCCGCCAACCTCCACGGTACCAGCGACACG 634
consensus_8177#0      ATCTTCGAGTTCTCCGCCCGCGGCTCCGTCTCCGCCAACCTCCACG-------------- 762
                       ***** * ******* *****************************              

consensus_8177#1      ------------------------------------------------------------
consensus_8177#2      AACGCGACACCTAACAGCAACAGCACGAACGCGCCGCCATTAATGGCGTTTTGACGTTTC 694
consensus_8177#0      ------------------------------------------------------------
                                                                                  

consensus_8177#1      ----------------------------ACGAGAAGAAGGCGCCGGCGATGGGGTGGGCG 729
consensus_8177#2      TTGATTTGATTTGATTGCTGCATCGCAGACGAGAAGAAGGCGCCGGCGATGGGGTGGGCG 754
consensus_8177#0      -------------------------------ACGAGAGGCTGCCGGTGATGCCGTGGCGG 791
                                                     *  *** *  ***** ****  ****  *

consensus_8177#1      GTGCGGCGCGCCATTGCCGTCGGCACGGCGAGGGGGCTGGAGTACCTGCACAAGGGGTGC 789
consensus_8177#2      GTGCGGCGCGCCATTGCCGTCGGCACGGCGAGGGGGCTGGAGTACCTGCACAAGGGGTGC 814
consensus_8177#0      CGGCGCCACGGGATCGCCGTCGGCACCGCGAGGGGGCTCCGGTACCTCCACAAGGGTTGC 851
                        *** * **  ** *********** ***********   ****** ******** ***

consensus_8177#1      CAGAGGAGGATCATCCACAGGGACATCAAGGCATCCAACGTGCTTCTCACCGACGACTTC 849
consensus_8177#2      CAGAGGAGGATCATCCACAGGGACATCAAGGCATCCAACGTGCTTCTCACCGACGACTTC 874
consensus_8177#0      GCGCGCCGGATCATACACCGCGACATCAAGGCGTCCAACGTCCTCCTCACCGCCGACTAC 911
                        * *  ******* *** * *********** ******** ** ******* ***** *

consensus_8177#1      CAGCCTCAGATTTCCGATTTCGGGCTCGCCAAGTGGCTGCCGTCGGAGTGGACGCACCGG 909
consensus_8177#2      CAGCCTCAGGT---CAGTCTCT--------------------TCGGAG---ACATCCGAT 908
consensus_8177#0      GAGCCCCAGATTTCGGACTTCGGCCTCGCCCGGTGGCTGCCGTCGGAGTGGACGCACCAC 971
                       **** *** *        **                     ******   **   *   

consensus_8177#1      GCGATCGCCCCGATCGAAGGAACATTCGGGTGTTTGGCACCGGAGTACTACACGCATGGC 969
consensus_8177#2      AAAATTGGAACGATACAACAAAGATTAGCATGGCCACTACGCAAGGATGACACGCACAA- 967
consensus_8177#0      GCCATCGCGCCCATCGAGGGCACCTTCGGGTGCTTGGCGCCGGAGTACTTCACGCACGGC 1031
                         ** *   * **  *    *  ** *  **       *   ** *   ******    

consensus_8177#1      ATCGTCGACGAGAAGACGGACGTGTTCGCGTTCGGCGTCTTCCTC---CTGGAGATCATG 1026
consensus_8177#2      ATGGAGAA--ATAATCCAAATTTTTTTAGGAGCTGTATTTTTCTCATGCTATATTTAATG 1025
consensus_8177#0      ATCGTGGACGAGAAGACGGACGTGTTCGCCTTCGGCGTCTTCCTC---CTCGAGCTCATC 1088
                      ** *   *  * **  *  *  * **      * *  * ** ***   **  *  * ** 

consensus_8177#1      ACCGGGAGAAAGCCGGTGGATGGCAGCCACAAGAGCTTGCTCAGCTGGGCGAGGCCGTTC 1086
consensus_8177#2      AATAAGCACAATCTTGTGCT---------------------------------------- 1045
consensus_8177#0      TCCGGGAGGAAGCCGGTGGACGGCTCCCACAAGAGCCTCCTCGCCTGGGCGAAGCCGTAC 1148
                           *   ** *  ***                                          

consensus_8177#1      CTGAACGAGGGGAGGATCGAGTCGCTGGTGGATCCGAGGATCGGCG---GCGACTACGAC 1143
consensus_8177#2      ------------------------------------------------------------
consensus_8177#0      CTGAACGACTGCGTGGCGCAGGGGCTCGTGGACCCGCGCCTCGGCGACGGCGGCTACGAC 1208
                                                                                  

consensus_8177#1      GGCGAGGAGGCGCGGCGGCTGGCGTTCGTGGCGTCGCTGTGCATCCGCTCGTCGGCGAAG 1203
consensus_8177#2      ------------------------------------------------------------
consensus_8177#0      GGCGCGCAGCTCAGGCGGCTCATGTTCGTCGCGTCGCTCTGCGTCCGGCCCGCCGCGGCG 1268
                                                                                  

consensus_8177#1      TGGAGGCCATCCATGACCGAGGTGCTGGAGCTGCTGGAAGGCGTCGAGATCCGGCAAGAA 1263
consensus_8177#2      ------------------------------------------------------------
consensus_8177#0      TGGCGGCCTACCATGACACAGGTCCTGGAGTTATAGGAGTCCGGCGAGATATCTCAAGAT 1328
                                                                                  

consensus_8177#1      CGGTGGACGATGCCCGAGGCAGTGGAGGACGACGACGACGAGGAGCTATGGAGATTCGAT 1323
consensus_8177#2      ------------------------------------------------------------
consensus_8177#0      CAATGGCTGATGCCCGAGGAGGAGGAGGAAGACGAGTTTTGGGATTTCGACGATCTCGAC 1388
                                                                                  

consensus_8177#1      GACCTGGATGACGAAGACGACGAAGATGAAGAGGAGTTCAACACTGCATCCCCATCTTCT 1383
consensus_8177#2      ------------------------------------------------------------
consensus_8177#0      GACTTCGAGGACGACGACGACGACGATGATGACAACTATGATAACGACGATGAATCGGAT 1448
                                                                                  

consensus_8177#1      TGCTCATCATCTTTG--AGCAATTAGTAGTTAGTAATAGTATCTAAGATTGTGAGTAAGC 1441
consensus_8177#2      ------------------------------------------------------------
consensus_8177#0      TCTCCCTCGATATCGTCGTCAGCGTGCAGCATCCACGCCAATGATTAGCCCCAAAATATT 1508
                                                                                  

consensus_8177#1      TTGTGATGTTGTTACAAGATGAAATTTTTGATAGTTACTCTCCACTGGGCCCACTTGTAA 1501
consensus_8177#2      ------------------------------------------------------------
consensus_8177#0      TGAGTCTGTCAGTCTTGACAGAGTGCCCCAATTGGTTTTGGTTTTTAGGGGATACTATGA 1568
                                                                                  

consensus_8177#1      ATAGAAAGGATTTTCATCTTATCATCATCCAACAGGCTATGAAAAGC------------- 1548
consensus_8177#2      ------------------------------------------------------------
consensus_8177#0      TCGATGGGATTATATTAGTGTACATAAACCACCTAGACAATAGTAAATTCAGAAAAGAAA 1628
                                                                                  

consensus_8177#1      ----------------------------------------
consensus_8177#2      ----------------------------------------
consensus_8177#0      AAAAAACTGTTCAGGCCCATGGTTTTGATCAAAAAAAAAA 1668
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)