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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8219#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2610 fasta sequence
[AGGGGTAAAGGTGTGTGAGGTGAAGGCGAGGGGAGAAGCGAGAAGCTCGTGAGCAGCAGCGGTGTGTGTGTGTGTGTGTGTGTGTGCGTGGGGCGAAGGGAGGGGAAGATTTTTTTGAGAAGGAGAACTTGTTGCTCCGGGCGTTTCTTGGGCGCCGCCATGGACGCCTACGAGGCGACCAAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAGATCATGGGCCTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTCGGCCCCGAGGCGCTGCTCCACAGCGTCATGGCGCAGGCTCGCAAGGAGCTCGCCCTCCTCCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGCCCACCGTGCCGGCGGCCCACTCGCCGTTCCTGCTGTCGCGGCAGAACTCCGGCCGCGGCCCCGCGCCGTCGCCGTCGCCGCTGTCCGCGTCCTCGCCGTCCTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGCAATGGGTCCGTGGATGAGGTGGTGGGCGCTGGGGAGGAGCTAATCAGCCCGGCGAACAGCGGGGGAGGCGCCGCGGCGAACGCGCCGCCCTTCTTTCCTCGGGGTGGGGACGTGCTCCTGGACGACTTCCAGCTGCAGGAGCAGCTCGCGTTCCTCAACGAGGGGGGTGTCAACCCCAGCCACCCTCTCCAGGGGTTCGATGGAGCGGAGTGCCGGAGCCCCGGTCCCGGCGAGGGCGGCGGGATGTTCCCGTACGGTCTCGGCTGGGCAAACGGTGGCCCTGGGCACCGCCGGAGCGCGTCGGTCAACGAGCTCTGCCTCGGCGGCGGCAGCAGCGACGGCTTCGGGTGGAAGCCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCAGCTGCAGGTTCGTCCACGGCGACGACGCCGCCGCTCTGACGGGCGCCGCCATGGACGCGGCCACCGCCGAGCAGCAGCAGTGCCAGGATTTCCTCCTCCGTTCCAAGAGCCAGCGCCTCGGCCCTGCTGCCTTCCCCTATTCACCCACAGGGTCGCTCCCCGGCTCGCCATCCGCCGCCACCAAGTGCCTCAGCCTCTTGCTGCAGCAGCAGCACAACGACAACCAAAGAGCCGCGGCGGCGGCGGCGCTGATGCTCGGCGGCAGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGACTTTGCCAGCATGATGAACCCCGGATCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGTCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTGTACCCTGAGACGGTGAAGCTGATCTTGGCCAAGGGCAATCCGCATTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCTTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAACATCAAGGTGACTTCTCCGGCTGCACGACCCCCACTGGCCTGGACGGCAGAGACCCATTCGATCTGCATCAGCTCGGTGCGAGGATGCTGCAGCACTCCAATAGCACAAACGAGATGATGCTTCGTAGGAAACTGGAGGAGCAGCAGCAGGCTGCCGAGCTGCAACAGGCCATCGAACTCCACAGTCGCCGTCTCATGGACCTCCAGCTGCTCGACCTCAAGAATAGAGCCGCAGCTGCTGTCACAACAGCAATGGCGATGACAATTCCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGGTCGAGTCACCGCCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGAGGAAAATGGTCAACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATGCTGATAGCGACCAAAGCTTGGAGCACAATTTGCCGGACAGCCCGTTTGCTTCGCCGACTAAGTCCTCTGTCTCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAAGTAGCTGCAGTGCATCTCATGTAGGCATCAGCGCGGGCACTAATGCTGGAGGTGGAATCAACCATCTGCGGCCCTCTACTTTGGATATACCTTCGCCAAGAGACTTCTTCTCGGTTTCCAGGCTGGCCTCTGATCACGGAGCGATTGGGATGTAAAGTTCTCTGCAATGGATGAGTGAATCCCCCAGCCTAATCATAGAACACAAGAAGCAAAAGAAAAGCGATAGTGGAATATAGGAGAAAAGGAGTGAAGTGTCAGCATAGTGTTAGCTCCCTTGTTTATTTCTTTTTGGTTGCCCTTTTTAGTGGGTAGCTCTATTAAAACCACAAGTGAAGATGCCATTAGCC-TTTGACTAGG--AAAAAAGCCAGTAGATGCAGACATGCAGTGTTGTGAGATACTTAATATATATAAGCAATCCAGTGTTACCCCCTTATAATATTAGATATACTAGTAGTACTCAATTACAACTGGCATCAACAACATATATAGNTGATGTTTACCCAGTTGTCATCTAAGTTGTAGGCNCTAACTGNGAAGTNACT]
[+] EMBL AK102616 [AGGGGTAAAGGTGTGTGAGGTGAAGGCGAGGGGAGAAGCGAGAAGCTCGTGAGCAGCAGCGGTGTGTGTGTGTGTGTGTGTGTGTGCGTGGGGCGAAGGGAGGGGAAGATTTTTTTGAGAAGGAGAACTTGTTGCTCCGGGCGTTTCTTGGGCGCCGCCATGGACGCCTACGAGGCGACCAAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAGATCATGGGCCTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTCGGCCCCGAGGCGCTGCTCCACAGCGTCATGGCGCAGGCTCGCAAGGAGCTCGCCCTCCTCCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGCCCACCGTGCCGGCGGCCCACTCGCCGTTCCTGCTGTCGCGGCAGAACTCCGGCCGCGGCCCCGCGCCGTCGCCGTCGCCGCTGTCCGCGTCCTCGCCGTCCTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGCAATGGGTCCGTGGATGAGGTGGTGGGCGCTGGGGAGGAGCTAATCAGCCCGGCGAACAGCGGGGGAGGCGCCGCGGCGAACGCGCCGCCCTTCTTTCCTCGGGGTGGGGACGTGCTCCTGGACGACTTCCAGCTGCAGGAGCAGCTCGCGTTCCTCAACGAGGGGGGTGTCAACCCCAGCCACCCTCTCCAGGGGTTCGATGGAGCGGAGTGCCGGAGCCCCGGTCCCGGCGAGGGCGGCGGGATGTTCCCGTACGGTCTCGGCTGGGCAAACGGTGGCCCTGGGCACCGCCGGAGCGCGTCGGTCAACGAGCTCTGCCTCGGCGGCGGCAGCAGCGACGGCTTCGGGTGGAAGCCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCAGCTGCAGGTTCGTCCACGGCGACGACGCCGCCGCTCTGACGGGCGCCGCCATGGACGCGGCCACCGCCGAGCAGCAGCAGTGCCAGGATTTCCTCCTCCGTTCCAAGAGCCAGCGCCTCGGCCCTGCTGCCTTCCCCTATTCACCCACAGGGTCGCTCCCCGGCTCGCCATCCGCCGCCACCAAGTGCCTCAGCCTCTTGCTGCAGCAGCAGCACAACGACAACCAAAGAGCCGCGGCGGCGGCGGCGCTGATGCTCGGCGGCAGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGACTTTGCCAGCATGATGAACCCCGGATCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGTCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTGTACCCTGAGACGGTGAAGCTGATCTTGGCCAAGGGCAATCCGCATTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCTTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAACATCAAGGTGACTTCTCCGGCTGCACGACCCCCACTGGCCTGGACGGCAGAGACCCATTCGATCTGCATCAGCTCGGTGCGAGGATGCTGCAGCACTCCAATAGCACAAACGAGATGATGCTTCGTAGGAAACTGGAGGAGCAGCAGCAGGCTGCCGAGCTGCAACAGGCCATCGAACTCCACAGTCGCCGTCTCATGGACCTCCAGCTGCTCGACCTCAAGAATAGAGCCGCAGCTGCTGTCACAACAGCAATGGCGATGACAATTCCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGGTCGAGTCACCGCCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGAGGAAAATGGTCAACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATGCTGATAGCGACCAAAGCTTGGAGCACAATTTGCCGGACAGCCCGTTTGCTTCGCCGACTAAGTCCTCTGTCTCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAAGTAGCTGCAGTGCATCTCATGTAGGCATCAGCGCGGGCACTAATGCTGGAGGTGGAATCAACCATCTGCGGCCCTCTACTTTGGATATACCTTCGCCAAGAGACTTCTTCTCGGTTTCCAGGCTGGCCTCTGATCACGGAGCGATTGGGATGTAAAGTTCTCTGCAATGGATGAGTGAATCCCCCAGCCTAATCATAGAACACAAGAAGCAAAAGAAAAGCGATAGTGGAATATAGGAGAAAAGGAGTGAAGTGTCAGCATAGTGTTAGCTCCCTTGTTTATTTCTTTTTGGTTGCCCTTTTTAGTGGGTAGCTCTATTAAAACCACAAGTGAAGATGCCATTAGCC TTTGACTAGG AAAAAAGCCAGTAGATGCAGACATGCAGTGTTGTGAGATACTTAATATATATAAGCAATCCAGTGTTACCCCCTTATAATATTAGATATACTAGTAGTACTCAATTACAACT ]
[+] EMBL BP184770 [ AGGATGCTGCAGCACTCCAATAGCACAAACGAGATGATGCTTCGTAGGAAACTGGAGGAGCAGCAGCAGGCTGCCGAGCTGCAACAGGCCATCGAACTCCACAGTCGCCGTCTCATGGACCTCCAGCTGCTCGACCTCAAGAATAGAGCCGCAGCTGCTGTCACAACAGCAATGGCGATGACAATTCCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGGTCGAGTCACCGCCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGAGGAAAATGGTCAACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATGCTGATAGCGACCAAAGCTTGGAGCACAATTTGCCGGACAGCCCGTTTGCTTCGCCGACTAAGTCCTCTGTCTCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAAGTAGCTGCAGTGCATCTCATGTAGGCATCAGCGCGGGCACTAATGCTGGAGGTGGAATCAACCATCTGCGGCCCTCTACTTTGGATATACCTTCGCCAAGAGACTTCTTCTCGGTTTCCAGGCTGGCCTCTGATCACGGAGCGAT ]
[+] EMBL CA767102 [ CAATTCCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGGTCGAGTCACCGCCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGAGGAAAATGGTCAACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATGCTGATAGCGACCAAAGCTTGGAGCACAATTTGCCGGACGGCCCGTTTGCTTCGCCGACTAAGTCCTCTGTCTCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAAGTAGCTGCAGTGCATCTCATGTAGGCATCAGCGCGGGCACTAATGCTGGAGGTGGAATCAACCATCTGCGGCCCTCTACTTTGGATATACCTTCGCCAAGAGACTTCTTCTCGGTTTCCAGGCTGGCCTCTGATCACGGAGCGATTGGGATGTAAAGTTCTCTGCAATGGATGAGTGAATCCCCCAGCCTAATCATAGAACACAAGAAGCAAAAGAAAAGCGATAGTGGAATATAGGAGAAAAGGAGTGAAGTGTCAGCATAGTGTTAGCTCCCTTCTTTATTTCTTTTTGGTTGCCCTTTTTAGTGGGTAGCTCTATTAAAACCACAAGTGAAGATGCCATTAGCCTTTTGACTAGGAAAAAAAAGCCAGTAGATGCAGACATGCAGTGTTGTGAGATACTTAATATATATAAGCAATCCAGTGTTACCCCCTTATAATATTAGATATACTAGGAGTACTCAATTACAACTGGCATCAACAACATATATAGNTGATGTTTACCCAGTTGTCATCTAAGTTGTAGGCNCTAACTGNGAAGTNACT]
consensusID : consensus_8219#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2211 fasta sequence
[CGTCGCCGTCGTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGTAACAGCATGGGCAATGGCGGCGCCGCGGATGAGATGGTCGGCGCTGGGGAGGAGCTAATGAGCCCCTTGAACGGCGGGGGAGGCGCCGCGGCGAACGCCCCGCCCTTCTTTCCTCGGGGTGGGGACGCGCTCCTGGACGACTTCGAGCTGCAGGAGCAGCTCGCGTTCCTGCACGACGGAGCCGGGGCGTGAACCCCGGGCATGCTCTCCAGGCGTTCGACGGAGCGGAGTGCCGGAGCCCCGGCACCGGCGAGAGCGGCGGGATGCTCCCCTACGGCCTCGCCTGGGCCAACGGCGGCCCTGGGCACCGCCGCAGCGCGTCGGTGAACGAGCTCTGCCTCGGCGGCGACGGCTTCGGGTGGAAACCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCACCTGCAGGTTCGTCCATGGCGGCCTCTCCGACGACGCCGCCATGGACGCAACCACCGCCGAACAGCAGCAGTGCCAGGATTTCCTCCTCCGCTCCAAGAGCCAGCGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCACAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTGCAGCAGCAGCAGCAGCACAACGACAACCAAAGAGCCGCCGCGGCCGCGCTGATGCTCGCCGGCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGATTTCGCCAGCATGATGAACCCCGGGTCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGGCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTTTACCCGGAGACGGTGAAGCTGATCTTGGCCAAGGGCAACCCGCACTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCCTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAGCAGCAGCAAGGCGATTTCTGCTGCATGTCGCCCACGGGGTTAGACGCCAGGGACCCCTTTGATTTTCACCAGCTCGGTGCAAGGATGCTGCAGCACTCCAACAGCGCGAACGAGCTAATGCTGCGGCGGAAGCTCGAGGAGCAGCAACAGGCGGCGGAGCTGCAGCAGGCTATTGATCTCCATAGCCGCCGCCTCATTGGCCTCCAGCTGCTCGACCTCAAGTCTTCTGCCGCTGTCCATGCGGCGGAGACGACAACAATGTCTCTGCCCACTCCGATCACCAATGCCTTCACCTCCGGCCAACCCGGTGCCACCACAATCGTCGAGTCACCGCCTAGCTCTACTGGGCAACTGATGGCGAGCTGCGGCTCTCCATCGGAGGGGAAAGTTGTCAATGGTGGTAATAAGGCGGATTCTGCCGGTGAGGTTACCCGCAATGCCGATAGTGACCAAAGTGGTGAGCACAACTTGCCAGACAGCCCGTTTGCTTCCTCTACCAAGTCGACCGCATTCTTTACCGCAACCGCTGCCACTGCCATTGGTAGCGAGGGAGATTTCACCACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGCCAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCATGCCCAGGCTGTCCGAGCACGGGGCGATCGGGATGTAAAGTAGTCCACAATGGAAGTGGCTGAAACCCTCTCCAGAAATCATAGAATACATGAAGCAAAGAAAGTGTTATCGGAATATAGGGGAAAAAAGGAGTGGAGTGTCAGCGTAGTTTTTAGGATGTTTAGCTCCCCTTTCTTTTCGTTTTTAAGCTTCTCTCACCTTTTAGTGGATAGCTCCATTAAACAACACGAGAAGAAGAAGATGCCATTAGCCCTTATGGAAGAAAAAGTGGCAGCATATGAAGTATTGTGATATACTACTATATATAATACTACTCTATATATATATAAATAATTTAGTGGTGCGCCTAATTATACTAGAGAATATAGTACTATGTGGCAGTTAGCAGTTATTTTGTTTACTACTGCCATCAGACAATTGATGTTGTTACCCAGTTCTTCCATGTATAACAACTACTCGTATATTATACTGATTCTGTGGTTAATCCTGGAGGCAAGTGCC]
[+] EMBL AK102918 [CGTCGCCGTCGTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGTAACAGCATGGGCAATGGCGGCGCCGCGGATGAGATGGTCGGCGCTGGGGAGGAGCTAATGAGCCCCTTGAACGGCGGGGGAGGCGCCGCGGCGAACGCCCCGCCCTTCTTTCCTCGGGGTGGGGACGCGCTCCTGGACGACTTCGAGCTGCAGGAGCAGCTCGCGTTCCTGCACGACGGAGCCGGGGCGTGAACCCCGGGCATGCTCTCCAGGCGTTCGACGGAGCGGAGTGCCGGAGCCCCGGCACCGGCGAGAGCGGCGGGATGCTCCCCTACGGCCTCGCCTGGGCCAACGGCGGCCCTGGGCACCGCCGCAGCGCGTCGGTGAACGAGCTCTGCCTCGGCGGCGACGGCTTCGGGTGGAAACCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCACCTGCAGGTTCGTCCATGGCGGCCTCTCCGACGACGCCGCCATGGACGCAACCACCGCCGAACAGCAGCAGTGCCAGGATTTCCTCCTCCGCTCCAAGAGCCAGCGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCACAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTGCAGCAGCAGCAGCAGCACAACGACAACCAAAGAGCCGCCGCGGCCGCGCTGATGCTCGCCGGCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGATTTCGCCAGCATGATGAACCCCGGGTCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGGCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTTTACCCGGAGACGGTGAAGCTGATCTTGGCCAAGGGCAACCCGCACTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCCTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAGCAGCAGCAAGGCGATTTCTGCTGCATGTCGCCCACGGGGTTAGACGCCAGGGACCCCTTTGATTTTCACCAGCTCGGTGCAAGGATGCTGCAGCACTCCAACAGCGCGAACGAGCTAATGCTGCGGCGGAAGCTCGAGGAGCAGCAACAGGCGGCGGAGCTGCAGCAGGCTATTGATCTCCATAGCCGCCGCCTCATTGGCCTCCAGCTGCTCGACCTCAAGTCTTCTGCCGCTGTCCATGCGGCGGAGACGACAACAATGTCTCTGCCCACTCCGATCACCAATGCCTTCACCTCCGGCCAACCCGGTGCCACCACAATCGTCGAGTCACCGCCTAGCTCTACTGGGCAACTGATGGCGAGCTGCGGCTCTCCATCGGAGGGGAAAGTTGTCAATGGTGGTAATAAGGCGGATTCTGCCGGTGAGGTTACCCGCAATGCCGATAGTGACCAAAGTGGTGAGCACAACTTGCCAGACAGCCCGTTTGCTTCCTCTACCAAGTCGACCGCATTCTTTACCGCAACCGCTGCCACTGCCATTGGTAGCGAGGGAGATTTCACCACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGCCAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCATGCCCAGGCTGTCCGAGCACGGGGCGATCGGGATGTAAAGTAG ]
[+] EMBL AK064318 [ CAGCCCGTTTGCTTCCTCTACCAAGTCGACCGCATTCTTTACCGCAACCGCTGCCACTGCCATTGGTAGCGAGGGAGATTTCACTACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGCCAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCATGCCCAGGCTGTCCGAGCACGGGGCGATCGGGATGTAAAGTAGTCCACAATGGAAGTGGCTGAAACCCTCTCCAGAAATCATAGAATACATGAAGCAAAGAAAGTGTTATCGGAATATAGGGGAAAAAAGGAGTGGAGTGTCAGCGTAGTTTTTAGGATGTTTAGCTCCCCTTTCTTTTCGTTTTTAAGCTTCTCTCACCTTTTAGTGGATAGCTCCATTAAACAACACGAGAAGAAGAAGATGCCATTAGCCCTTATGGAAGAAAAAGTGGCAGCATATGAAGTATTGTGATATACTACTATATATAATACTACTCTATATATATATAAATAATTTAGTGGTGCGCCTAATTATACTAGAGAATATAGTACTATGTGGCAGTTAGCAGTTATTTTGTTTACTACTGCCATCAGACAATTGATGTTGTTACCCAGTTCTTCCATGTATAACAACTACTCGTATATTATACTGATTCTGTGGTTAATCCTGGAGGCAAGTGCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8219#0 AGGGGTAAAGGTGTGTGAGGTGAAGGCGAGGGGAGAAGCGAGAAGCTCGTGAGCAGCAGC 60
consensus_8219#1 ------------------------------------------------------------
consensus_8219#0 GGTGTGTGTGTGTGTGTGTGTGTGTGCGTGGGGCGAAGGGAGGGGAAGATTTTTTTGAGA 120
consensus_8219#1 ------------------------------------------------------------
consensus_8219#0 AGGAGAACTTGTTGCTCCGGGCGTTTCTTGGGCGCCGCCATGGACGCCTACGAGGCGACC 180
consensus_8219#1 ------------------------------------------------------------
consensus_8219#0 AAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAGATCATGGGC 240
consensus_8219#1 ------------------------------------------------------------
consensus_8219#0 CTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTCGGCCCCGAG 300
consensus_8219#1 ------------------------------------------------------------
consensus_8219#0 GCGCTGCTCCACAGCGTCATGGCGCAGGCTCGCAAGGAGCTCGCCCTCCTCCCGCCGCCG 360
consensus_8219#1 ------------------------------------------------------------
consensus_8219#0 CCGCCGCCGTCGTCGTCGTCGCCCACCGTGCCGGCGGCCCACTCGCCGTTCCTGCTGTCG 420
consensus_8219#1 ------------------------------------------------------------
consensus_8219#0 CGGCAGAACTCCGGCCGCGGCCCCGCGCCGTCGCCGTCGCCGCTGTCCGCGTCCTCGCCG 480
consensus_8219#1 ----------------------------------------------------CGTCGCCG 8
* ******
consensus_8219#0 TCCTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGCAA-----TGGGT----------CC 525
consensus_8219#1 TCGTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGTAACAGCATGGGCAATGGCGGCGCC 68
** ******************************** ** **** **
consensus_8219#0 GTGGATGAGGTGGTGGGCGCTGGGGAGGAGCTAATCAGCCCGGCGAACAGCGGGGGAGGC 585
consensus_8219#1 GCGGATGAGATGGTCGGCGCTGGGGAGGAGCTAATGAGCCCCTTGAACGGCGGGGGAGGC 128
* ******* **** ******************** ***** **** ***********
consensus_8219#0 GCCGCGGCGAACGCGCCGCCCTTCTTTCCTCGGGGTGGGGACGTGCTCCTGGACGACTTC 645
consensus_8219#1 GCCGCGGCGAACGCCCCGCCCTTCTTTCCTCGGGGTGGGGACGCGCTCCTGGACGACTTC 188
************** **************************** ****************
consensus_8219#0 CAGCTGCAGGAGCAGCTCGCGTTCCTCAACGAGGG-----GGGTGTCAACCCCAGCCACC 700
consensus_8219#1 GAGCTGCAGGAGCAGCTCGCGTTCCTGCACGACGGAGCCGGGGCGTGAACCCCGGGCATG 248
************************* **** ** *** ** ****** * **
consensus_8219#0 CTCTCCAGGGGTTCGATGGAGCGGAGTGCCGGAGCCCCGGTCCCGGCGAGGGCGGCGGGA 760
consensus_8219#1 CTCTCCAGGCGTTCGACGGAGCGGAGTGCCGGAGCCCCGGCACCGGCGAGAGCGGCGGGA 308
********* ****** *********************** ******** *********
consensus_8219#0 TGTTCCCGTACGGTCTCGGCTGGGCAAACGGTGGCCCTGGGCACCGCCGGAGCGCGTCGG 820
consensus_8219#1 TGCTCCCCTACGGCCTCGCCTGGGCCAACGGCGGCCCTGGGCACCGCCGCAGCGCGTCGG 368
** **** ***** **** ****** ***** ***************** **********
consensus_8219#0 TCAACGAGCTCTGCCTCGGCGGCGGCAGCAGCGACGGCTTCGGGTGGAAGCCTTGCCTGT 880
consensus_8219#1 TGAACGAGCTCTGCCTCGGCGGCG---------ACGGCTTCGGGTGGAAACCTTGCCTGT 419
* ********************** **************** **********
consensus_8219#0 ACTACGCGCGCGGGTTCTGCAAGAACGGCAGCAGCTGCAGGTTCGTCCACGGCGACGACG 940
consensus_8219#1 ACTACGCGCGCGGGTTCTGCAAGAACGGCAGCACCTGCAGGTTCGTCCATGGCG------ 473
********************************* *************** ****
consensus_8219#0 CCGCCGCTCTGACGGGCGCCGCCATGGACGCGGCCACCGCCGAGCAGCAGCAGTGCCAGG 1000
consensus_8219#1 --GCCTCTCCGACGA-CGCCGCCATGGACGCAACCACCGCCGAACAGCAGCAGTGCCAGG 530
*** *** **** *************** ********** ****************
consensus_8219#0 ATTTCCTCCTCCGTTCCAAGAGCCAGCGCCTCGGCCCTGCTGCCTTCCCCTATTCACCCA 1060
consensus_8219#1 ATTTCCTCCTCCGCTCCAAGAGCCAGCGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCA 590
************* *********************** ** ******** * * ****
consensus_8219#0 CAGGGTCGCTCCCCGGCTCGCCATCCGCCGCCACCAAGTGCCTCAGCCTCTTGCTGCAGC 1120
consensus_8219#1 CAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTGCAGC 650
**** ** ***** * ************* *** **************** * *******
consensus_8219#0 AGCAGCA------CAACGACAACCAAAGAGCCGCGGCGGCGGCGGCGCTGATGCTCGGCG 1174
consensus_8219#1 AGCAGCAGCAGCACAACGACAACCAAAGAGCCGCCGCGGCCGCG---CTGATGCTCGCCG 707
******* ********************* ***** *** ********** **
consensus_8219#0 GCAGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGACTTTGCCA 1234
consensus_8219#1 GCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGATTTCGCCA 767
** ************************************************* ** ****
consensus_8219#0 GCATGATGAACCCCGGATCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCC 1294
consensus_8219#1 GCATGATGAACCCCGGGTCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCC 827
**************** *******************************************
consensus_8219#0 GCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGTCCGGTGCACGACGTGCGCATCC 1354
consensus_8219#1 GCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGGCCGGTGCACGACGTGCGCATCC 887
************************************* **********************
consensus_8219#0 CGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTGTACCCTGAGACGGTGAAGC 1414
consensus_8219#1 CGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTTTACCCGGAGACGGTGAAGC 947
**************************************** ***** *************
consensus_8219#0 TGATCTTGGCCAAGGGCAATCCGCATTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCTT 1474
consensus_8219#1 TGATCTTGGCCAAGGGCAACCCGCACTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCCT 1007
******************* ***** ******************************** *
consensus_8219#0 ACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAACATCAAGGTGACTTCTCCGGCT 1534
consensus_8219#1 ACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAGCAGCAGCAAGGCGATTTCTGCT 1067
************************************* ** ** * * * * ***
consensus_8219#0 GCACGACCCCCACTGGCCTGGACGGCAGAGACCCATTCGATCTGCATCAGCTCGGTGCGA 1594
consensus_8219#1 GCATGTCGCCCACGGGGTTAGACGCCAGGGACCCCTTTGATTTTCACCAGCTCGGTGCAA 1127
*** * * ***** ** * **** *** ***** ** *** * ** *********** *
consensus_8219#0 GGATGCTGCAGCACTCCAATAGCACAAACGAGATGATGCTTCGTAGGAAACTGGAGGAGC 1654
consensus_8219#1 GGATGCTGCAGCACTCCAACAGCGCGAACGAGCTAATGCTGCGGCGGAAGCTCGAGGAGC 1187
******************* *** * ****** * ***** ** **** ** *******
consensus_8219#0 AGCAGCAGGCTGCCGAGCTGCAACAGGCCATCGAACTCCACAGTCGCCGTCTCATGGACC 1714
consensus_8219#1 AGCAACAGGCGGCGGAGCTGCAGCAGGCTATTGATCTCCATAGCCGCCGCCTCATTGGCC 1247
**** ***** ** ******** ***** ** ** ***** ** ***** ***** * **
consensus_8219#0 TCCAGCTGCTCGACCTCAAGAATAGAGCCGCAGCT------GCTGTCACAACAGCAATGG 1768
consensus_8219#1 TCCAGCTGCTCGACCTCAAGTCTTCTGCCGCTGTCCATGCGGCGGAGACGACAACAATGT 1307
******************** * ***** * ** * ** *** *****
consensus_8219#0 CGATGACAATTCCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGG 1828
consensus_8219#1 CTCTGCCCACTCCGATCACCAATGCCTTCACCTCCGGCCAACCCGGTGCCACCACAATCG 1367
* ** * * *** * * *********** *** * ** ** ********* ** *
consensus_8219#0 TCGAGTCACCGCCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGA 1888
consensus_8219#1 TCGAGTCACCGCCTAGCTCTACTGGGCAACTGATGGCGAGCTGCGGCTCTCCATCGGAGG 1427
************** *** * *** ** * ** * * ** ** ***
consensus_8219#0 GGAAAATGGTCAACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATG 1948
consensus_8219#1 GGAAAGTTGTCAATGGTGG---TAATAAGGCGGATTCTGCCGGTGAGGTTACCCGCAATG 1484
***** * ***** ** ** * ****** ** ***** ******* * ** ****
consensus_8219#0 CTGATAGCGACCAAAGCTTGGAGCACAATTTGCCGGACAGCCCGTTTGCTTCGCCGACTA 2008
consensus_8219#1 CCGATAGTGACCAAAGTGGTGAGCACAACTTGCCAGACAGCCCGTTTGCTTCCTCTACCA 1544
* ***** ******** ******** ***** ***************** * ** *
consensus_8219#0 AGTCCTCTGTCTCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAA 2068
consensus_8219#1 AGTCGACCGCATT------------CTTTACCGCAACCGCTGCCACTGCCATT--GGTAG 1590
**** * * * ** *** * ** * * ** ** * * * *
consensus_8219#0 GTAGCTGCAGTGCATCTCATGTAG--GCATCAGCGCGGGCACTAATGCTGGAGGTGGAAT 2126
consensus_8219#1 CGAGGGAGATTTCACCACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGC 1650
** * * ** * * **** ** ** ** * *** * ** *
consensus_8219#0 CAACCATCTGCGGCCCTCTACTTTGGATATACCTTCGCCAAGAG---ACTTCTTCTCGGT 2183
consensus_8219#1 CAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCAT 1710
***** *** ***** * ** ***** ************** ******* * *
consensus_8219#0 TTCCAGGCTGGCCTCTGATCACGGAGCGATTGGGATGTAAAGTTCTCTGCAATGGA--TG 2241
consensus_8219#1 GCCCAGGCTG---TCCGAGCACGGGGCGATCGGGATGTAAAGTAGTCCACAATGGAAGTG 1767
******** ** ** ***** ***** ************ ** ******* **
consensus_8219#0 AGTGAATCCCCCAGCCTAA-TCATAGAACACAAGAAGCAAAAGAAAAGCGATAGTGGAAT 2300
consensus_8219#1 GCTGAAACCCTCTCCAGAAATCATAGAATACATGAAGCAAAGAAAGTGTTATCGGAATAT 1827
**** *** * * ** ******** *** ******** ** * ** * **
consensus_8219#0 ATAGGAGAAAAGGAGTGAAGTGTCAGCATAGTGTT----------AGCTCCCTTGTTTAT 2350
consensus_8219#1 AGGGGAAAAAAGGAGTGGAGTGTCAGCGTAGTTTTTAGGATGTTTAGCTCCCCTTTCTTT 1887
* *** ********** ********* **** ** ******* * * * *
consensus_8219#0 TTCTTTTTGG-----TTGCCCTTTTTAGTGGGTAGCTCTATTAAA-ACCACAAGT----G 2400
consensus_8219#1 TCGTTTTTAAGCTTCTCTCACCTTTTAGTGGATAGCTCCATTAAACAACACGAGAAGAAG 1947
* ***** * * * ********* ****** ****** * *** ** *
consensus_8219#0 AAGATGCCATTAGCCTTTGACTAGGAAAAAA-GCCAGTAGATGCAGACATGCAGTGT--- 2456
consensus_8219#1 AAGATGCCATTAGCCCTTATGGAAGAAAAAGTGGCAGCATATGAAGTATTGTGATATACT 2007
*************** ** * ****** * *** * *** ** ** * *
consensus_8219#0 ----TGTGAGATACT----TA-ATATATATAAGCAATCCAGTGTTACCCCC--TTATAAT 2505
consensus_8219#1 ACTATATATAATACTACTCTATATATATATAAATAATTTAGTGGTGCGCCTAATTATACT 2067
* * ***** ** ********** *** **** * * ** ***** *
consensus_8219#0 ATTAGATATACTA-------GTAGTACTCAATTACAACTGGCATCAACAACAT-ATATAG 2557
consensus_8219#1 AGAGAATATAGTACTATGTGGCAGTTAGCAGTTATTTTGTTTACTACTGCCATCAGACAA 2127
* ***** ** * *** ** *** * * *** * * *
consensus_8219#0 NTGATGTT--TACCCAGTTGTCATCTAAGTTGTAGGCNCTA--ACTGNGAAGTNACT--- 2610
consensus_8219#1 TTGATGTTGTTACCCAGTTCTTCCATGTATAACAACTACTCGTATATTATACTGATTCTG 2187
******* ********* * * * * ** * * * * *
consensus_8219#0 ------------------------
consensus_8219#1 TGGTTAATCCTGGAGGCAAGTGCC 2211
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||