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Oryza sativa
cluster # 8226 cluster # 8226       Sequences # 5       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8226#0 length = 1568 sequences # 1  
consensus_8226#1 length = 1434 sequences # 1  
consensus_8226#2 length = 1217 sequences # 1  
consensus_8226#3 length = 1206 sequences # 1  
consensus_8226#4 length = 467 sequences # 1  

consensusID : consensus_8226#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1568
fasta sequence
                              [TCACACACCTAGCTAGCAAGTAGGCTCTCTCACTCCACACCCACACTACTCCTCCCAGGCTGCCTGCCTAAAAGGCTAGACCTATCCATCTCTTCCCCCCACTCCTCCAGCATCGCCATCATCCACTGTTCATCCACTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCGATCCCTGCAGGTTCTTGCTGCTGCTGCTGCTGCCTTGCTTGCTGTCAAGCATGGCTTGACCACCTGAGAGCGAGGAGAGCATAGCGTAGTACTTGGCTAGCTGCTGTTCAATTCCTCATGGATGATTGGAGGATCGCTAGCTAGGTCGCCCGGATCCACGGACACCTCTCCTCGTCTCGTGCTCGTGCATGCCAAGATCGATCGATCCCAGCTGCTGCTGCGAGTGGAGCAGTGGAGGAGGAGATCGGCTGCTACCTGACCTAGATCGGGAAGCAGATTCATCCGGTTGCATTACGGCGGCGAGGCGAGGGCGAGGATGGATCGTCACCATCACCACCACCACCACCACCACCATCACATGATGTCGGGCGGCGGGCAAGACCCGGCGGCGGGGGACGGCGGCGCCGGCGGCGCCACGCAGGACAGCTTCTTCCTCGGCCCGGCCGCGGCCGCCATGTTCTCCGGCGCCGGGTCGTCGTCGTCGGGCGCGGGGACGTCGGCGGGAGGCGGCGGCGGCGGGCCATCGCCGTCCAGCTCGTCGCCGTCGCTGAGCCGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCGGGCAGTACCTGCGGAACCACCGGCCGCCGCTGTCCCTGTCGCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCAAGTACATGGACCAGTTCGGGAAGACGAAGGTGCACACGCCGGTGTGCCCCTTCTACGGCCACCCCAACCCGCCGGCGCCATGCCCGTGCCCGCTCCGCCAAGCCTGGGGCTCCCTCGACGCGCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCACGCCGGAGATGAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTGCGCGAGGTGCGCGAGACGCAGGCCAGGGCGAGGGGGATCAGCTACGAGAAGAAGAAGCGCAAGAAGCCCTCGTCCGCCGGCGCCGGAGCCGGGCCCTCGTCCGAGGGGAGCCCGCCGCCACCCGGCGGCTCGGCCAGCGGCGGCGGCGACACGTCGGCGTCGCCGCAGTTCATCATCCCGTGAGTTCTTCTCGATCCCCATCGCCATCTCCGCATCTCCATTGATCGATCGAGCCTCGCAGCAAGAAATTCCAATCTCCTTGGCAGAAATGCCATCTTGCTTTGCCAGTACAAGGCATCATATCTCTTCTTTCCTCCTGAATTGGTTTCGATCTCTCCCATTTTGCAAAAAAAAGATTTCTCCTCTTTTTAATTTCATCTCTGTCTCGCTTTCTAAGCTAGGACGAAGGTCATGCATGAGTGATTTCAATTGGTAGCTTAATTAAGACAGAAACAACATGTGTTATGTGTACTTGTCCTGGGAACAGATTCCATATATATGCCAAATGCTTT]

[+] EMBL AK111446             [TCACACACCTAGCTAGCAAGTAGGCTCTCTCACTCCACACCCACACTACTCCTCCCAGGCTGCCTGCCTAAAAGGCTAGACCTATCCATCTCTTCCCCCCACTCCTCCAGCATCGCCATCATCCACTGTTCATCCACTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCGATCCCTGCAGGTTCTTGCTGCTGCTGCTGCTGCCTTGCTTGCTGTCAAGCATGGCTTGACCACCTGAGAGCGAGGAGAGCATAGCGTAGTACTTGGCTAGCTGCTGTTCAATTCCTCATGGATGATTGGAGGATCGCTAGCTAGGTCGCCCGGATCCACGGACACCTCTCCTCGTCTCGTGCTCGTGCATGCCAAGATCGATCGATCCCAGCTGCTGCTGCGAGTGGAGCAGTGGAGGAGGAGATCGGCTGCTACCTGACCTAGATCGGGAAGCAGATTCATCCGGTTGCATTACGGCGGCGAGGCGAGGGCGAGGATGGATCGTCACCATCACCACCACCACCACCACCACCATCACATGATGTCGGGCGGCGGGCAAGACCCGGCGGCGGGGGACGGCGGCGCCGGCGGCGCCACGCAGGACAGCTTCTTCCTCGGCCCGGCCGCGGCCGCCATGTTCTCCGGCGCCGGGTCGTCGTCGTCGGGCGCGGGGACGTCGGCGGGAGGCGGCGGCGGCGGGCCATCGCCGTCCAGCTCGTCGCCGTCGCTGAGCCGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCGGGCAGTACCTGCGGAACCACCGGCCGCCGCTGTCCCTGTCGCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCAAGTACATGGACCAGTTCGGGAAGACGAAGGTGCACACGCCGGTGTGCCCCTTCTACGGCCACCCCAACCCGCCGGCGCCATGCCCGTGCCCGCTCCGCCAAGCCTGGGGCTCCCTCGACGCGCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCACGCCGGAGATGAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTGCGCGAGGTGCGCGAGACGCAGGCCAGGGCGAGGGGGATCAGCTACGAGAAGAAGAAGCGCAAGAAGCCCTCGTCCGCCGGCGCCGGAGCCGGGCCCTCGTCCGAGGGGAGCCCGCCGCCACCCGGCGGCTCGGCCAGCGGCGGCGGCGACACGTCGGCGTCGCCGCAGTTCATCATCCCGTGAGTTCTTCTCGATCCCCATCGCCATCTCCGCATCTCCATTGATCGATCGAGCCTCGCAGCAAGAAATTCCAATCTCCTTGGCAGAAATGCCATCTTGCTTTGCCAGTACAAGGCATCATATCTCTTCTTTCCTCCTGAATTGGTTTCGATCTCTCCCATTTTGCAAAAAAAAGATTTCTCCTCTTTTTAATTTCATCTCTGTCTCGCTTTCTAAGCTAGGACGAAGGTCATGCATGAGTGATTTCAATTGGTAGCTTAATTAAGACAGAAACAACATGTGTTATGTGTACTTGTCCTGGGAACAGATTCCATATATATGCCAAATGCTTT]


>consensus_8226#0 TCACACACCTAGCTAGCAAGTAGGCTCTCTCACTCCACACCCACACTACTCCTCCCAGGC TGCCTGCCTAAAAGGCTAGACCTATCCATCTCTTCCCCCCACTCCTCCAGCATCGCCATC ATCCACTGTTCATCCACTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCGATCC CTGCAGGTTCTTGCTGCTGCTGCTGCTGCCTTGCTTGCTGTCAAGCATGGCTTGACCACC TGAGAGCGAGGAGAGCATAGCGTAGTACTTGGCTAGCTGCTGTTCAATTCCTCATGGATG ATTGGAGGATCGCTAGCTAGGTCGCCCGGATCCACGGACACCTCTCCTCGTCTCGTGCTC GTGCATGCCAAGATCGATCGATCCCAGCTGCTGCTGCGAGTGGAGCAGTGGAGGAGGAGA TCGGCTGCTACCTGACCTAGATCGGGAAGCAGATTCATCCGGTTGCATTACGGCGGCGAG GCGAGGGCGAGGATGGATCGTCACCATCACCACCACCACCACCACCACCATCACATGATG TCGGGCGGCGGGCAAGACCCGGCGGCGGGGGACGGCGGCGCCGGCGGCGCCACGCAGGAC AGCTTCTTCCTCGGCCCGGCCGCGGCCGCCATGTTCTCCGGCGCCGGGTCGTCGTCGTCG GGCGCGGGGACGTCGGCGGGAGGCGGCGGCGGCGGGCCATCGCCGTCCAGCTCGTCGCCG TCGCTGAGCCGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCGGGCAGTACCTG CGGAACCACCGGCCGCCGCTGTCCCTGTCGCGGTGCAGCGGCGCGCACGTGCTGGAGTTC CTCAAGTACATGGACCAGTTCGGGAAGACGAAGGTGCACACGCCGGTGTGCCCCTTCTAC GGCCACCCCAACCCGCCGGCGCCATGCCCGTGCCCGCTCCGCCAAGCCTGGGGCTCCCTC GACGCGCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCACGCCGGAGATG AACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTGCGCGAGGTGCGCGAGACGCAGGCC AGGGCGAGGGGGATCAGCTACGAGAAGAAGAAGCGCAAGAAGCCCTCGTCCGCCGGCGCC GGAGCCGGGCCCTCGTCCGAGGGGAGCCCGCCGCCACCCGGCGGCTCGGCCAGCGGCGGC GGCGACACGTCGGCGTCGCCGCAGTTCATCATCCCGTGAGTTCTTCTCGATCCCCATCGC CATCTCCGCATCTCCATTGATCGATCGAGCCTCGCAGCAAGAAATTCCAATCTCCTTGGC AGAAATGCCATCTTGCTTTGCCAGTACAAGGCATCATATCTCTTCTTTCCTCCTGAATTG GTTTCGATCTCTCCCATTTTGCAAAAAAAAGATTTCTCCTCTTTTTAATTTCATCTCTGT CTCGCTTTCTAAGCTAGGACGAAGGTCATGCATGAGTGATTTCAATTGGTAGCTTAATTA AGACAGAAACAACATGTGTTATGTGTACTTGTCCTGGGAACAGATTCCATATATATGCCA AATGCTTT



consensusID : consensus_8226#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1434
fasta sequence
                              [GTTTCTTGTGTTGATCTGAGTTTGATTTGATTTTCAGTTTTGCACCATGCGATCGATCGAGAGTGTGTTGTTGTTCTTGTTTTGGTTCTTTTCTAGTAGTATCAGTTGCACTGATTAATTAATTAATATAGCTTGTGTTTTGATTCGGTAGACACGGCTATCTGCAGCGTATCAAAGCTTTTCCTGTTGCACACCACACCTACCATGAGTTCCTTTCAATCAATGCCTCTCTCTCTCTCTCTCGATCTGCAGATCAAATATACAATTCGCCTTCTCGATCGAGTAGTTGATGAACAGTGTTCCCCTTGATTGATTGATCACCATTATTATAACATCCTCTTTCTTTCTTCTCACTGTACCACACACTTCGATCTCTGCAGCCTGAACCAAGCAAGAATTATAGTATTAGAACAACTCCAGATATCTCTAAAGCTGATGATCTAGCTCTACTTTCTGCATCGATCGATCTCGTTAATTAGGGTTAGATCACCGGCCGGCACAGTGCATCTTCAAATAAGCATCATTTGCTCTTTGAGTGATACAGTACTATGCTTCCCCTTCTGCTGATCTGCTCTCTCTGTCCCTGCATGTATTACAGTTAATTTGTGTCAGTTCTTGCTTGGCTGAGCTAAGTTCACGCCAGATCTTCAAAACCCCAATCTTGCTACTGTGTTTTGTTTTTCTTGGACCACCCAGTTATCTGCCTTTTTTTATTTTTTTCCAAATCTCACAAAGCTTTGCACGTCAAACATATTAGAAGAAGCATTGAGATAACTTCCAGATTAGCTGAAACCCTAGTTCTTTCTCATTCTGAATCATCCACAGTATGTCAAATTCTCAATAGCATTAGCTGCTTGGTTTGACCATTGGTCATGGGGTTGACGAACTGACACGCAGCAATTAATGGTTCATGTTTGGCAGGTGAGAGATTGAGGAGATGGACATGATCGGCATGGCGTCGCCGGCGGAAAGCCCCGGCGGCGGCGGCACGGCCAGGCCGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGCAGACGTTCGGGCAGTATCTGCGCAACCACCGGCCGCCGCTGGAGCTCTCCCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCCGGTACCTGGACCAGTTCGGGAAGACGAAGGTGCACGCCCATGGCTGCCCCTTCTTCGGCCACCCCTCGCCGCCGGCGCCGTGCCCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCCCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCCCTGAGTCCAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGACATCCGCGACACGCAGTCCAAGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCGCCGCCGCCTCCCACACCAAGCAGAAGCAGCAGCAGCA]

[+] EMBL AK106854             [GTTTCTTGTGTTGATCTGAGTTTGATTTGATTTTCAGTTTTGCACCATGCGATCGATCGAGAGTGTGTTGTTGTTCTTGTTTTGGTTCTTTTCTAGTAGTATCAGTTGCACTGATTAATTAATTAATATAGCTTGTGTTTTGATTCGGTAGACACGGCTATCTGCAGCGTATCAAAGCTTTTCCTGTTGCACACCACACCTACCATGAGTTCCTTTCAATCAATGCCTCTCTCTCTCTCTCTCGATCTGCAGATCAAATATACAATTCGCCTTCTCGATCGAGTAGTTGATGAACAGTGTTCCCCTTGATTGATTGATCACCATTATTATAACATCCTCTTTCTTTCTTCTCACTGTACCACACACTTCGATCTCTGCAGCCTGAACCAAGCAAGAATTATAGTATTAGAACAACTCCAGATATCTCTAAAGCTGATGATCTAGCTCTACTTTCTGCATCGATCGATCTCGTTAATTAGGGTTAGATCACCGGCCGGCACAGTGCATCTTCAAATAAGCATCATTTGCTCTTTGAGTGATACAGTACTATGCTTCCCCTTCTGCTGATCTGCTCTCTCTGTCCCTGCATGTATTACAGTTAATTTGTGTCAGTTCTTGCTTGGCTGAGCTAAGTTCACGCCAGATCTTCAAAACCCCAATCTTGCTACTGTGTTTTGTTTTTCTTGGACCACCCAGTTATCTGCCTTTTTTTATTTTTTTCCAAATCTCACAAAGCTTTGCACGTCAAACATATTAGAAGAAGCATTGAGATAACTTCCAGATTAGCTGAAACCCTAGTTCTTTCTCATTCTGAATCATCCACAGTATGTCAAATTCTCAATAGCATTAGCTGCTTGGTTTGACCATTGGTCATGGGGTTGACGAACTGACACGCAGCAATTAATGGTTCATGTTTGGCAGGTGAGAGATTGAGGAGATGGACATGATCGGCATGGCGTCGCCGGCGGAAAGCCCCGGCGGCGGCGGCACGGCCAGGCCGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGCAGACGTTCGGGCAGTATCTGCGCAACCACCGGCCGCCGCTGGAGCTCTCCCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCCGGTACCTGGACCAGTTCGGGAAGACGAAGGTGCACGCCCATGGCTGCCCCTTCTTCGGCCACCCCTCGCCGCCGGCGCCGTGCCCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCCCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCCCTGAGTCCAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGACATCCGCGACACGCAGTCCAAGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCGCCGCCGCCTCCCACACCAAGCAGAAGCAGCAGCAGCA]


>consensus_8226#1 GTTTCTTGTGTTGATCTGAGTTTGATTTGATTTTCAGTTTTGCACCATGCGATCGATCGA GAGTGTGTTGTTGTTCTTGTTTTGGTTCTTTTCTAGTAGTATCAGTTGCACTGATTAATT AATTAATATAGCTTGTGTTTTGATTCGGTAGACACGGCTATCTGCAGCGTATCAAAGCTT TTCCTGTTGCACACCACACCTACCATGAGTTCCTTTCAATCAATGCCTCTCTCTCTCTCT CTCGATCTGCAGATCAAATATACAATTCGCCTTCTCGATCGAGTAGTTGATGAACAGTGT TCCCCTTGATTGATTGATCACCATTATTATAACATCCTCTTTCTTTCTTCTCACTGTACC ACACACTTCGATCTCTGCAGCCTGAACCAAGCAAGAATTATAGTATTAGAACAACTCCAG ATATCTCTAAAGCTGATGATCTAGCTCTACTTTCTGCATCGATCGATCTCGTTAATTAGG GTTAGATCACCGGCCGGCACAGTGCATCTTCAAATAAGCATCATTTGCTCTTTGAGTGAT ACAGTACTATGCTTCCCCTTCTGCTGATCTGCTCTCTCTGTCCCTGCATGTATTACAGTT AATTTGTGTCAGTTCTTGCTTGGCTGAGCTAAGTTCACGCCAGATCTTCAAAACCCCAAT CTTGCTACTGTGTTTTGTTTTTCTTGGACCACCCAGTTATCTGCCTTTTTTTATTTTTTT CCAAATCTCACAAAGCTTTGCACGTCAAACATATTAGAAGAAGCATTGAGATAACTTCCA GATTAGCTGAAACCCTAGTTCTTTCTCATTCTGAATCATCCACAGTATGTCAAATTCTCA ATAGCATTAGCTGCTTGGTTTGACCATTGGTCATGGGGTTGACGAACTGACACGCAGCAA TTAATGGTTCATGTTTGGCAGGTGAGAGATTGAGGAGATGGACATGATCGGCATGGCGTC GCCGGCGGAAAGCCCCGGCGGCGGCGGCACGGCCAGGCCGAGCAGGTACGAGTCGCAGAA GCGGCGGGACTGGCAGACGTTCGGGCAGTATCTGCGCAACCACCGGCCGCCGCTGGAGCT CTCCCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCCGGTACCTGGACCAGTTCGGGAA GACGAAGGTGCACGCCCATGGCTGCCCCTTCTTCGGCCACCCCTCGCCGCCGGCGCCGTG CCCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCCCTCGTCGGCCGCCTCCGCGC CGCCTTCGAGGAGCACGGCGGCCGCCCTGAGTCCAACCCCTTCGGCGCCCGCGCCGTCCG CCTCTACCTCCGCGACATCCGCGACACGCAGTCCAAGGCCCGCGGCATCGCCTACGAGAA GAAGCGCCGCAAGCGCGCCGCCGCCTCCCACACCAAGCAGAAGCAGCAGCAGCA



consensusID : consensus_8226#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1217
fasta sequence
                              [CACACACTCCGTCCCAACAAGCTACTCTTCTTCTTCTTCTACCTCCTCACCCCTACCCATTCTCTCTCTCTCTCTCTCTCTAGCTAGCTAGAGCAGCAACCAACCATGGAGCCTTCCCCCGACGCGCCACGCGCCGGGGCAGCGGAAGAGCAGCCTGGTCCGTCCTCCTCGGCGTCGGCGCCGGCGCCCGCGGCGTCGTCGAACGAAGAAGAAGGGAGACATCAGTCGCAGGCGCAGCAGCAGGTGCAAGAAGCGCAGCCGCAGCCGCTGGCGCAGCAGGCGCCGGCGGCGGCGGGGCTGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCCTGCAGTACCTGCGGAACCACAAGCCGCCGCTGACGCTGCCGCGGTGCAGCGGCGCGCACGTCATCGAGTTCCTCAAGTACCTGGACCAGTTCGGGAAGACCAAGGTGCACGCCGACGGGTGCGCCTACTTCGGCGAGCCCAACCCGCCGGCGCCGTGCGCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGTCCGGCGGCCGCCCGGAGTCCAACCCCTTCGCCGCCCGCGCCGTCCGCATCTACCTCCGCGAGGTCCGCGAGGCGCAGGCCAAGGCGCGTGGGATCCCCTACGAGAAGAAGCGCAAGCGTGGCGCCGCCGCCGCCGCCGCCGCCCCTCCCGTCGTCGTCGCGCCGCCCCCCGTCGTCACCGCGCCCGACGACGCCACCGGGACGTCGGGAGGCGCCGGCGAGGACGACGACGACGACGAGGCCACCCACTCCGGCGAGCAGCAGGACACCACGCCGGCGGCCTCTCCTACTACTCCTCCGGCAACAAGTGTCGGTACTACCACCGCGGCGGCGACTGCGGCGGCGGCGAAGGGAAGTGCGGCGAAAGGATCGGCGACGAGTTCGTGATAAGTGTAGAGAAATCATTTGCCTCCCTTTCAATCCCCTCATCACCCTCCAAATTCTAATCCCCTGCAGCATCATCATCATCATCTTAATTTTTAGTGGTTGATTAATTATTATGATTATTACTGTTATTATTTGTTGGTATGAGAGTGGAGAGGCCTAATTAAGGGGGTTTGTAGGATAATGTTAGGATCGAGTACATAAAAGGCTGCTAAATTAACATGCAGAAAATTTCAATTTGAAGAAATAAGAGGAAGACA]

[+] EMBL AK106384             [CACACACTCCGTCCCAACAAGCTACTCTTCTTCTTCTTCTACCTCCTCACCCCTACCCATTCTCTCTCTCTCTCTCTCTCTAGCTAGCTAGAGCAGCAACCAACCATGGAGCCTTCCCCCGACGCGCCACGCGCCGGGGCAGCGGAAGAGCAGCCTGGTCCGTCCTCCTCGGCGTCGGCGCCGGCGCCCGCGGCGTCGTCGAACGAAGAAGAAGGGAGACATCAGTCGCAGGCGCAGCAGCAGGTGCAAGAAGCGCAGCCGCAGCCGCTGGCGCAGCAGGCGCCGGCGGCGGCGGGGCTGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCCTGCAGTACCTGCGGAACCACAAGCCGCCGCTGACGCTGCCGCGGTGCAGCGGCGCGCACGTCATCGAGTTCCTCAAGTACCTGGACCAGTTCGGGAAGACCAAGGTGCACGCCGACGGGTGCGCCTACTTCGGCGAGCCCAACCCGCCGGCGCCGTGCGCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGTCCGGCGGCCGCCCGGAGTCCAACCCCTTCGCCGCCCGCGCCGTCCGCATCTACCTCCGCGAGGTCCGCGAGGCGCAGGCCAAGGCGCGTGGGATCCCCTACGAGAAGAAGCGCAAGCGTGGCGCCGCCGCCGCCGCCGCCGCCCCTCCCGTCGTCGTCGCGCCGCCCCCCGTCGTCACCGCGCCCGACGACGCCACCGGGACGTCGGGAGGCGCCGGCGAGGACGACGACGACGACGAGGCCACCCACTCCGGCGAGCAGCAGGACACCACGCCGGCGGCCTCTCCTACTACTCCTCCGGCAACAAGTGTCGGTACTACCACCGCGGCGGCGACTGCGGCGGCGGCGAAGGGAAGTGCGGCGAAAGGATCGGCGACGAGTTCGTGATAAGTGTAGAGAAATCATTTGCCTCCCTTTCAATCCCCTCATCACCCTCCAAATTCTAATCCCCTGCAGCATCATCATCATCATCTTAATTTTTAGTGGTTGATTAATTATTATGATTATTACTGTTATTATTTGTTGGTATGAGAGTGGAGAGGCCTAATTAAGGGGGTTTGTAGGATAATGTTAGGATCGAGTACATAAAAGGCTGCTAAATTAACATGCAGAAAATTTCAATTTGAAGAAATAAGAGGAAGACA]


>consensus_8226#2 CACACACTCCGTCCCAACAAGCTACTCTTCTTCTTCTTCTACCTCCTCACCCCTACCCAT TCTCTCTCTCTCTCTCTCTCTAGCTAGCTAGAGCAGCAACCAACCATGGAGCCTTCCCCC GACGCGCCACGCGCCGGGGCAGCGGAAGAGCAGCCTGGTCCGTCCTCCTCGGCGTCGGCG CCGGCGCCCGCGGCGTCGTCGAACGAAGAAGAAGGGAGACATCAGTCGCAGGCGCAGCAG CAGGTGCAAGAAGCGCAGCCGCAGCCGCTGGCGCAGCAGGCGCCGGCGGCGGCGGGGCTG AGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCCTGCAGTACCTGCGGAAC CACAAGCCGCCGCTGACGCTGCCGCGGTGCAGCGGCGCGCACGTCATCGAGTTCCTCAAG TACCTGGACCAGTTCGGGAAGACCAAGGTGCACGCCGACGGGTGCGCCTACTTCGGCGAG CCCAACCCGCCGGCGCCGTGCGCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCG CTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGTCCGGCGGCCGCCCGGAGTCCAACCCC TTCGCCGCCCGCGCCGTCCGCATCTACCTCCGCGAGGTCCGCGAGGCGCAGGCCAAGGCG CGTGGGATCCCCTACGAGAAGAAGCGCAAGCGTGGCGCCGCCGCCGCCGCCGCCGCCCCT CCCGTCGTCGTCGCGCCGCCCCCCGTCGTCACCGCGCCCGACGACGCCACCGGGACGTCG GGAGGCGCCGGCGAGGACGACGACGACGACGAGGCCACCCACTCCGGCGAGCAGCAGGAC ACCACGCCGGCGGCCTCTCCTACTACTCCTCCGGCAACAAGTGTCGGTACTACCACCGCG GCGGCGACTGCGGCGGCGGCGAAGGGAAGTGCGGCGAAAGGATCGGCGACGAGTTCGTGA TAAGTGTAGAGAAATCATTTGCCTCCCTTTCAATCCCCTCATCACCCTCCAAATTCTAAT CCCCTGCAGCATCATCATCATCATCTTAATTTTTAGTGGTTGATTAATTATTATGATTAT TACTGTTATTATTTGTTGGTATGAGAGTGGAGAGGCCTAATTAAGGGGGTTTGTAGGATA ATGTTAGGATCGAGTACATAAAAGGCTGCTAAATTAACATGCAGAAAATTTCAATTTGAA GAAATAAGAGGAAGACA



consensusID : consensus_8226#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1206
fasta sequence
                              [TAGTACCTCCGAGCTAAGCCACTCCACCGCCGATTGATCGCGTCACGGCGGCGCAGCCCGGCCGCCAGCGTCGTCCGTCCGATCGGCAGATCTGAGGAGGGAGAAAGGTTTGCTGCTGCTTGTGCTAGGACGTCATGCAGGGAGGCGGCGGCGGGGATAGCTCCGGCGGCGGCGGCGGCGAGGCGCCGCGGCCGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGCACACGTTCGGGCAGTACCTGCGCAACCACCGGCCGCCGCTGGAGCTGTCGCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCCGGTACCTGGACCAGTTCGGGAAGACGAAGGTGCACGCCGCGGGGTGCCCCTTCTTCGGCCACCCCTCGCCGCCGGCGCCGTGCCCGTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCCCCGAGGCCAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGAGGTCCGCGACAGCCAGGCCAAGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCCCGCCCACCTCCTCGTCTTCGTCTCAGGCCGCCGCCGCCGCCGCCGCCGCCACCTCCCCGGCGAGCCCAGCCGCTAGCCCGACGCCGCCACCGCCACCGCCGACGGAGAGATCAGCCGACGTGCGGCCGATGCCACCGGAGGGCCACTTCTTCATCCCGCACCCACACTTCATGCACGGACACTTCCTCGTACCGGGCGGCGACGCCGACCACCACCACCAGGTCTCCAACGCCGGCAATGGCGGCAACACCAACACCAACACCAACACCAACACCGGCGGCGGCGGCGGCAACGGCGACGAGATGGCGGTGGCGATGGCGGCGGTGGCGGAGGCGCACGCGGCGGGGTGCATGCTGCCGCTGTCCGTGTTTAACTAGCAGTAATATTCAGAGATCAGCAGCATATAGCAAAAATCAAGGTAGGGCTTAATCAAATCCGGGGGAGGGTTTTAATTAATGGATTACTCCAACCTTAGTTCGTTAAAACCGATCGATCGATCGATGGATCGATGCGTCTCATCATGATGGAATGATGGATTCGATTGGATTCGATTCGATCGAGCTATCAACGTAGCGCTACTGTGTATGTACTGTTTGTGTTCTTATCAAACTCTAC]

[+] EMBL AK068794             [TAGTACCTCCGAGCTAAGCCACTCCACCGCCGATTGATCGCGTCACGGCGGCGCAGCCCGGCCGCCAGCGTCGTCCGTCCGATCGGCAGATCTGAGGAGGGAGAAAGGTTTGCTGCTGCTTGTGCTAGGACGTCATGCAGGGAGGCGGCGGCGGGGATAGCTCCGGCGGCGGCGGCGGCGAGGCGCCGCGGCCGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGCACACGTTCGGGCAGTACCTGCGCAACCACCGGCCGCCGCTGGAGCTGTCGCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCCGGTACCTGGACCAGTTCGGGAAGACGAAGGTGCACGCCGCGGGGTGCCCCTTCTTCGGCCACCCCTCGCCGCCGGCGCCGTGCCCGTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCCCCGAGGCCAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGAGGTCCGCGACAGCCAGGCCAAGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCCCGCCCACCTCCTCGTCTTCGTCTCAGGCCGCCGCCGCCGCCGCCGCCGCCACCTCCCCGGCGAGCCCAGCCGCTAGCCCGACGCCGCCACCGCCACCGCCGACGGAGAGATCAGCCGACGTGCGGCCGATGCCACCGGAGGGCCACTTCTTCATCCCGCACCCACACTTCATGCACGGACACTTCCTCGTACCGGGCGGCGACGCCGACCACCACCACCAGGTCTCCAACGCCGGCAATGGCGGCAACACCAACACCAACACCAACACCAACACCGGCGGCGGCGGCGGCAACGGCGACGAGATGGCGGTGGCGATGGCGGCGGTGGCGGAGGCGCACGCGGCGGGGTGCATGCTGCCGCTGTCCGTGTTTAACTAGCAGTAATATTCAGAGATCAGCAGCATATAGCAAAAATCAAGGTAGGGCTTAATCAAATCCGGGGGAGGGTTTTAATTAATGGATTACTCCAACCTTAGTTCGTTAAAACCGATCGATCGATCGATGGATCGATGCGTCTCATCATGATGGAATGATGGATTCGATTGGATTCGATTCGATCGAGCTATCAACGTAGCGCTACTGTGTATGTACTGTTTGTGTTCTTATCAAACTCTAC]


>consensus_8226#3 TAGTACCTCCGAGCTAAGCCACTCCACCGCCGATTGATCGCGTCACGGCGGCGCAGCCCG GCCGCCAGCGTCGTCCGTCCGATCGGCAGATCTGAGGAGGGAGAAAGGTTTGCTGCTGCT TGTGCTAGGACGTCATGCAGGGAGGCGGCGGCGGGGATAGCTCCGGCGGCGGCGGCGGCG AGGCGCCGCGGCCGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGCACACGTTCGGGC AGTACCTGCGCAACCACCGGCCGCCGCTGGAGCTGTCGCGGTGCAGCGGCGCGCACGTGC TGGAGTTCCTCCGGTACCTGGACCAGTTCGGGAAGACGAAGGTGCACGCCGCGGGGTGCC CCTTCTTCGGCCACCCCTCGCCGCCGGCGCCGTGCCCGTGCCCGCTCCGCCAGGCGTGGG GCAGCCTCGACGCGCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCC CCGAGGCCAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGAGGTCCGCGACA GCCAGGCCAAGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCCCGCCCACCT CCTCGTCTTCGTCTCAGGCCGCCGCCGCCGCCGCCGCCGCCACCTCCCCGGCGAGCCCAG CCGCTAGCCCGACGCCGCCACCGCCACCGCCGACGGAGAGATCAGCCGACGTGCGGCCGA TGCCACCGGAGGGCCACTTCTTCATCCCGCACCCACACTTCATGCACGGACACTTCCTCG TACCGGGCGGCGACGCCGACCACCACCACCAGGTCTCCAACGCCGGCAATGGCGGCAACA CCAACACCAACACCAACACCAACACCGGCGGCGGCGGCGGCAACGGCGACGAGATGGCGG TGGCGATGGCGGCGGTGGCGGAGGCGCACGCGGCGGGGTGCATGCTGCCGCTGTCCGTGT TTAACTAGCAGTAATATTCAGAGATCAGCAGCATATAGCAAAAATCAAGGTAGGGCTTAA TCAAATCCGGGGGAGGGTTTTAATTAATGGATTACTCCAACCTTAGTTCGTTAAAACCGA TCGATCGATCGATGGATCGATGCGTCTCATCATGATGGAATGATGGATTCGATTGGATTC GATTCGATCGAGCTATCAACGTAGCGCTACTGTGTATGTACTGTTTGTGTTCTTATCAAA CTCTAC



consensusID : consensus_8226#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 467
fasta sequence
                              [GCCGCTTAGAAACACAGGCGATCGATATAATGCAGTACGAACGAAGCACCTTCTACTGGTACTTCCGACGACAGAGTTCGTGAACAATTAGCAGCACAAATAATTAAAACCCATTACCATGCACATGCATGCATACGCGAACTTATAGTGCACATAAAATATATGTGCTCGATCTGGCATACCGACCAAATAGGAGAGCGTAGCGTAGGTAGATCGGCCGGCCGGCTCGGTCGCCCGCTCTCAGCAGGCGGCGCCGGCAGGCGGTGGAGGCGGCGGGTGATGCTGGTGGCCGTGAAGGCCACTGCTGTCGCCGCCCTGCAGCTGCTGCTGCTGCGGCTTCTTGCGCTTCTTCTTCTCGTAGCTGACGCCGCGGGCGCGCGCCTGGTGCTCGCGGACCTCGCGGAGGTAGAGGCGGACGGCGCGCGCGGCGAAGGGGTTGGACTCGGGCGGGCGCCGTACTCCTCGAA]

[+] EMBL AU225572             [GCCGCTTAGAAACACAGGCGATCGATATAATGCAGTACGAACGAAGCACCTTCTACTGGTACTTCCGACGACAGAGTTCGTGAACAATTAGCAGCACAAATAATTAAAACCCATTACCATGCACATGCATGCATACGCGAACTTATAGTGCACATAAAATATATGTGCTCGATCTGGCATACCGACCAAATAGGAGAGCGTAGCGTAGGTAGATCGGCCGGCCGGCTCGGTCGCCCGCTCTCAGCAGGCGGCGCCGGCAGGCGGTGGAGGCGGCGGGTGATGCTGGTGGCCGTGAAGGCCACTGCTGTCGCCGCCCTGCAGCTGCTGCTGCTGCGGCTTCTTGCGCTTCTTCTTCTCGTAGCTGACGCCGCGGGCGCGCGCCTGGTGCTCGCGGACCTCGCGGAGGTAGAGGCGGACGGCGCGCGCGGCGAAGGGGTTGGACTCGGGCGGGCGCCGTACTCCTCGAA]


>consensus_8226#4 GCCGCTTAGAAACACAGGCGATCGATATAATGCAGTACGAACGAAGCACCTTCTACTGGT ACTTCCGACGACAGAGTTCGTGAACAATTAGCAGCACAAATAATTAAAACCCATTACCAT GCACATGCATGCATACGCGAACTTATAGTGCACATAAAATATATGTGCTCGATCTGGCAT ACCGACCAAATAGGAGAGCGTAGCGTAGGTAGATCGGCCGGCCGGCTCGGTCGCCCGCTC TCAGCAGGCGGCGCCGGCAGGCGGTGGAGGCGGCGGGTGATGCTGGTGGCCGTGAAGGCC ACTGCTGTCGCCGCCCTGCAGCTGCTGCTGCTGCGGCTTCTTGCGCTTCTTCTTCTCGTA GCTGACGCCGCGGGCGCGCGCCTGGTGCTCGCGGACCTCGCGGAGGTAGAGGCGGACGGC GCGCGCGGCGAAGGGGTTGGACTCGGGCGGGCGCCGTACTCCTCGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8226#2      ------------------------------------------------------------
consensus_8226#3      ------------------------------------------------------------
consensus_8226#1      ------------------------------------------------------------
consensus_8226#0      TCACACACCTAGCTAGCAAGTAGGCTCTCTCACTCCACACCCACACTACTCCTCCCAGGC 60
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      ------------------------------------------------------------
consensus_8226#3      ------------------------------------------------------------
consensus_8226#1      ------------------------------------------------------------
consensus_8226#0      TGCCTGCCTAAAAGGCTAGACCTATCCATCTCTTCCCCCCACTCCTCCAGCATCGCCATC 120
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      ------------------------------------------------------------
consensus_8226#3      ------------------------------------------------------------
consensus_8226#1      ------------------------------------------------------------
consensus_8226#0      ATCCACTGTTCATCCACTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCGATCC 180
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      ------------------------------------------------------------
consensus_8226#3      ------------------------------------------------------------
consensus_8226#1      ------------------------------------------------------------
consensus_8226#0      CTGCAGGTTCTTGCTGCTGCTGCTGCTGCCTTGCTTGCTGTCAAGCATGGCTTGACCACC 240
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      ------------------------------------------------------------
consensus_8226#3      ------------------------------------------------------------
consensus_8226#1      ------------------------------------------------------------
consensus_8226#0      TGAGAGCGAGGAGAGCATAGCGTAGTACTTGGCTAGCTGCTGTTCAATTCCTCATGGATG 300
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      ------------------------------------------------------------
consensus_8226#3      ------------------------------------------------------------
consensus_8226#1      --------------------------------------------------------GTTT 4
consensus_8226#0      ATTGGAGGATCGCTAGCTAGGTCGCCCGGATCCACGGACACCTCTCCTCGTCTCGTGCTC 360
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      ---------------------------------------CACACACTCCGTCCCAACAAG 21
consensus_8226#3      ------------------------------------------------------------
consensus_8226#1      CTTGTGTTGATCTGAGTTTGATTTGATTTTCAGTTTTGCACCATGCGATCGATCGAGAGT 64
consensus_8226#0      GTGCATGCCAAGATCGATCGATCCCAGCTGCTGCTGCGAGTGGAGCAGTGGAGGAGGAGA 420
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      CTACTCTTCTTCTTCTTCTACCTCCTCACCCCTACCCATTCTCTCTCTCTCTCTCTCTCT 81
consensus_8226#3      ------------------------------------------------------------
consensus_8226#1      GTGTTGTTGTTCTTGTTTTGGTTCTTTTCTAGTAGTATCAGTTGCACTGATTAATTAATT 124
consensus_8226#0      TCGGCTGCTACCTGACCTAGATCGGGAAGCAGATTCATCCGGTTGCATTACGGCGGCGAG 480
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      AGC-TAGCTAGAGCAGCAACCAACCATGGA-GCCTTC-CCCCGACG--CGCCACGCGCCG 136
consensus_8226#3      -------------TAGTACCTCCGAGCTAA-GCCACT-CCAC------CGCCGATTGATC 39
consensus_8226#1      AATATAGCTTGTGTTTTGATTCGGTAGACACGGCTAT-CTGCAGCG--TATCAAA-GCTT 180
consensus_8226#0      GCGAGGGCGAGGATGGATCGTCACCATCACCACCACCACCACCACCACCATCACATGATG 540
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      GGGCAGCGGAAGAGCAGCCTGGTCCG---------TCCTCCTCGGCGTCGGCGC------ 181
consensus_8226#3      GCGTCACGGCGGCGCAGCCCGGCC-------------------GCCAGCGTCGT------ 74
consensus_8226#1      TTCCTGTTGCACACCACACCTACCATGAGT-----TCCTTTCAATCAATGCCTC------ 229
consensus_8226#0      TCG-GGCGGCGGGCAAGACCCGGCGGCGGGGGACGGCGGCGCCGGCGGCGCCACGCAGGA 599
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      CGGCGCCCGCGGCGTCGTCGAACGAAGAAGAAGGGAGACATCAGTCGCAGGCGCAGCAGC 241
consensus_8226#3      CCGTCCGATCGGCAGATCTGAGGAGGGAGAAAGGTTTGCTGCTGCTTGTGCTAGGACGTC 134
consensus_8226#1      TCTCTCTCTCTCTCGATCTGCAGATCAAATATACAATTCGCCTTCTCGATCGAGTAGTTG 289
consensus_8226#0      CAGCTTCTTCCTCGGCCCGGCCGCGGCCGCCATGTTCTCCGGCGCCGGGTCGTCGTCGTC 659
consensus_8226#4      -----------------------------------------------------GCCGCTT 7
                                                                                  

consensus_8226#2      AGGTGCAAGAAGCGC--------AGCCGCAGCCGCTGGCGCAGCAGGCGCCGGCG---GC 290
consensus_8226#3      ATGCAGGGAGGCGGC--------GGCGGGGATAGCTCCGGCGGC-GGCGGCGGCGAG-GC 184
consensus_8226#1      ATGAACAGTGTTCCCCTTGATTGATTGATCACCATTATTATAACATCCTCTTTCTTTCTT 349
consensus_8226#0      GGGCGCGGGGACGTCGGCGGG-AGGCGGCGGCGGCGGGC-CATCGCCGTCCAGCTCG-TC 716
consensus_8226#4      AGAAACACAGGCGATCGATATAATGCAGT-ACGAACGAAGCACCTTCTACTGGTACTTCC 66
                                                                 *                

consensus_8226#2      GGCGGGGCTGAGCAGGTACGAGTCGCAGAAGC---GGCGGGA--CTGGAAC-ACGTTCCT 344
consensus_8226#3      GCCGCGGCCGAGCAGGTACGAGTCGCAGAAGC---GGCGGGA--CTGGCAC-ACGTTCGG 238
consensus_8226#1      CTCACTGTACCACACACTTCGATCTCTGCAGCCTGAACCAAG--CAAGAATTATAGTATT 407
consensus_8226#0      GCCGTCGCTGAGCCGGTACGAGTCGCAGAAGC---GGCGGGA--CTGGAAC-ACGTTCGG 770
consensus_8226#4      GACGACAGAGTTCGTGAACAATTAGCAGCACAAATAATTAAAACCCATTACCATGCACAT 126
                        *         *         *  * * *              *    *  *       

consensus_8226#2      GCAGTACCTGCGGA-ACCAC--AAGCCGCCGCTGACGCTGC-CGCGGTGCAGCGG--CGC 398
consensus_8226#3      GCAGTACCTGCGCA-ACCAC--CGGCCGCCGCTGGAGCTGT-CGCGGTGCAGCGG--CGC 292
consensus_8226#1      AGAACAACTCCAGATATCTCTAAAGCTGATGATCTAGCTCTACTTTCTGCATCGAT-CGA 466
consensus_8226#0      GCAGTACCTGCGGA-ACCAC--CGGCCGCCGCTGTCCCTGT-CGCGGTGCAGCGG--CGC 824
consensus_8226#4      GCA-TGCATACGCGAACTTATAGTGCACATAAAATATATGTGCTCGATCTGGCATACCGA 185
                        *     * *    *        **            *   *    *    *    ** 

consensus_8226#2      GCACGTCA--TCGAGTTCCTCAAGTACCTGGACCAGTTCG-------GGAAGACCAAGGT 449
consensus_8226#3      GCACGTGC--TGGAGTTCCTCCGGTACCTGGACCAGTTCG-------GGAAGACGAAGGT 343
consensus_8226#1      TCTCGTTAATTAGGGTTAGATCACCGGCCGGCACAGTGCATCTTCAAATAAGCATCATTT 526
consensus_8226#0      GCACGTGC--TGGAGTTCCTCAAGTACATGGACCAGTTCG-------GGAAGACGAAGGT 875
consensus_8226#4      CCAAATAGGAGAGCGTAGCGTAGGTAGATCGGCCGGCCGG-------CTCGGTCGCCCGC 238
                       *   *      * **              *  * *               *        

consensus_8226#2      GCACGCCGACGGGTGC----GCCTACTTCGGCGAGC-CCAACC-CGCCGGCG-CCGTGCG 502
consensus_8226#3      GCACGCCGCGGGGTGC----CCCTTCTTCGGCCACC-CCTCGC-CGCCGGCG-CCGTGCC 396
consensus_8226#1      GCTCTTTGAGTGATACAGTACTATGCTTCCCCTTCTGCTGATC-TGCTCTCT-CTGTCCC 584
consensus_8226#0      GCACACGCCGGTGTGC----CCCTTCTACGGCCACC-CCAACC-CGCCGGCG-CCATGCC 928
consensus_8226#4      TCTCAGCAGGCGGCGCCG--GCAGGCGGTGGAGGCGGCGGGTGATGCTGGTGGCCGTGAA 296
                       * *           *         *           *       **      *  *   

consensus_8226#2      CCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCATCGGCCGCCTCCGCGCC- 561
consensus_8226#3      CGTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCGTCGGCCGCCTCCGCGCC- 455
consensus_8226#1      TGCATGTATTACAGTTAATTTGTGTCAGTTCTTGCTTGGCTG--AGCTAAGTTCACGCCA 642
consensus_8226#0      CGTGCCCGCTCCGCCAAGCCTGGGGCTCCCTCGACGCGCTCATCGGCCGCCTCCGCGCC- 987
consensus_8226#4      GGCCACTGCTGTCGCCGCCCTGCAGCTGCTGCTGC-TGC-----GGCTTCTTGCGCTTC- 349
                               *          **   *        *  *       **    * * *  * 

consensus_8226#2      GCCTACGAGGAGTCCGGCG--GCCGCCCGGAGTCCAACCCCTTCGCCGCCCGCGCCGTCC 619
consensus_8226#3      GCCTTCGAGGAGCACGGCG--GCCGCCCCGAGGCCAACCCCTTCGGCGCCCGCGCCGTCC 513
consensus_8226#1      GATCTTCAAAACCCCAATCTTGCTACTGTGTTTTGTTTTTCTTGGACCACCCAGTTATCT 702
consensus_8226#0      GCCTACGAGGAGAACGGCG--GCACGCCGGAGATGAACCCCTTCGGCGCCCGCGCCGTCC 1045
consensus_8226#4      TTCTTCTCGTAGC-TGACGCCGCGGGCGCGCGCCTGGTGCTCGCGGACCTCGCGGAGGTA 408
                                *          **      *              *     *  *      

consensus_8226#2      GCATCTACCTCCGCGAGGTCCGCGAGGCGCAGGCCAAGGCGCGTGGGATCCCCTACGAGA 679
consensus_8226#3      GCCTCTACCTCCGCGAGGTCCGCGACAGCCAGGCCAAGGCCCGCGGCATCGCCTACGAGA 573
consensus_8226#1      GCCTTTTTTTATTTTTT-TCCAAATCTCACAAAGCTTTGCACGTCAAACATATTAGAAGA 761
consensus_8226#0      GCCTCTACCTGCGCGAGGTGCGCGAGACGCAGGCCAGGGCGAGGGGGATCAGCTACGAGA 1105
consensus_8226#4      GAGGCGGACGGCGCGCGCGGCGAAGGGGTTGGACTCGGGCGGGCGCCGTACTCCTCGAA- 467
                      *                   *                 **  *              *  

consensus_8226#2      AGAAGCGC---AAGCGTGGCGCCGCCGC--CGCCGCCGCC----GCCCCTCCCGTCGTCG 730
consensus_8226#3      AGAAGCGCCGCAAGCGCCCGCCCACCTCCTCGTCTTCGTCTCAGGCCGCCGCCGCCGCCG 633
consensus_8226#1      AGCATTGAGATAACTTCCAGATTAGCTGAAACCCTAGTTCTTTCTCATTCTGAATCATCC 821
consensus_8226#0      AGAAG------AAGCGCAAGA---------AGCCCTCGTC------CGCCGGCGCCGGAG 1144
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      TCGC---GCCGCC-CCCCGTCG----TCACCGC---GCCCGACGAC--GCCACCGGGAC- 776
consensus_8226#3      CCGCC--GCCACCTCCCCGGCGAGCCCAGCCGCT-AGCCCGACGCC--GCCACCGCCACC 688
consensus_8226#1      ACAGTATGTCAAATTCTCAATAGCATTAGCTGCTTGGTTTGACCATTGGTCATGGGGTTG 881
consensus_8226#0      CCGG---GCCCTCGTCCGAGGGGAGCCCGCCGCC--ACCCGGCGGCTCGGC-CAGCGGCG 1198
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      GTCG--GGAGGCGC--CGGCGAGGACGACGACGACGAC----GAG-GCCACCCACTCCGG 827
consensus_8226#3      GCCGACGGAGAGAT--CAGCCGACGTGCGGCCGATGCCACCGGAG-GGCCACTTCTTCAT 745
consensus_8226#1      ACGAACTGACACGCAGCAATTAATGGTTCATGTTTGGCAGGTGAGAGATTGAGGAGATGG 941
consensus_8226#0      GCGG--CGACACGT--CGGCGTCGCCGCAGTTCATCAT-CCCGTGAGTTCTTCTCGATCC 1253
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      CGAGCAGCAGGACACCA-CGCCGGCGGCCTCTCCTACTACTCCTCCGGCAACAAGTGTCG 886
consensus_8226#3      CCCGCACCCACACTTCA-TGC--ACGGACACTTCCTCGTACCGGGCGGCGACGCCGACCA 802
consensus_8226#1      ACATGATCGGCATGGCGTCGCCGGCGGAAAGCCCCGGCGGCGGCGGCACGGCCAGGCCGA 1001
consensus_8226#0      CCATCGCCATCTCCGCATCTCCATTGATCGATCGAGCCTCGCAGCAAGAAATTCCAATCT 1313
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      GTACTACCA------CCGCG-GCGGCGACTGCGGCGGCGGCGAAGGGAAGT-GCGGCGAA 938
consensus_8226#3      CCACCACCAGGTCTCCAACG-CCGGCAATGGCGGCAACACCAACACCAACA-CCAACACC 860
consensus_8226#1      GCAGGTACGAGTCG-CAGAA-GCGGCGGGACTGGCAGACGTTCGGGCAGTA-TCTGCGCA 1058
consensus_8226#0      CCTTGGCAGAAATGCCATCTTGCTTTGCCAGTACAAGGCATCATATCTCTTCTTTCCTCC 1373
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      AGGATCGGCGACGAGTT---CGTGATAAGTGTAGAGAAA-TCATTTGCCT---CCCTTTC 991
consensus_8226#3      AACACCGGCGGCGGCGG---CGGCAACGGCGACGAGATG-GCGGTGGCGA---TGGCGGC 913
consensus_8226#1      ACCACCGGCCGCCGCTGGAGCTCTCCCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCC 1118
consensus_8226#0      TGAATTGGTTTCGATCTCT-CCCATTTTGCAAAAAAAAG-ATTTCTCCTCTTTTTAATTT 1431
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      AATCCCCTCATCACCCTC-----CAAATTCTAATCCCCTGCAGCATCATCATCATCATCT 1046
consensus_8226#3      GGTGGCGGAGGCGCACGCGG---CGGGGTGCATGCTGCCGCTGTCCGTGTTTAACTAGCA 970
consensus_8226#1      GGTACCTGGACCAGTTCGGG---AAGACGAAGGTGCACGCCCATGGCTGCCCCTTCTTCG 1175
consensus_8226#0      CATCTCTGTCTCGCTTTCTAAGCTAGGACGAAGGTCATGCATGAGTGATTTCAATTGGTA 1491
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      -TAATTTTTAGTGGTTGATTAATTATTATGATTATTACTGTTATTATTTGTTGGTATGAG 1105
consensus_8226#3      GTAATATTCAGAGATCAGCAGCATATAGCAAAAATCAAGGT-AGGGCTTAATCAAATCCG 1029
consensus_8226#1      GCCACCCCTCGCCGCCGGCGCCGTGCCCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCG 1235
consensus_8226#0      GCTTAATTAAGACAGAAACAACATGTGTTATGTGTACTTGT---CCTGGGAACAGATTCC 1548
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      AGT---GGAGAGGCCTAATTAAGGGGGT--TTGTAGGATAAT--G------TTAGGATCG 1152
consensus_8226#3      GG----GGAGGGTTTTAATTAATGGATTACTCCAACCTTAGTTCG------TTAAAACCG 1079
consensus_8226#1      ACGCCCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCCCTGAGTCCA 1295
consensus_8226#0      ATATATATGCCAAATGCTTT---------------------------------------- 1568
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      AGTACATAAAAGGCTGCTAAAT-------TAACATGCAGAAAATTTCAATTTGAAGAAAT 1205
consensus_8226#3      ATCGATCGATCGATGGATCGATGCGTCT-CATCATGATGGAATGATGGATTCGATTGGAT 1138
consensus_8226#1      ACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGACATCCGCGACACGCAGTCCA 1355
consensus_8226#0      ------------------------------------------------------------
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      AAGAGGAAGACA------------------------------------------------ 1217
consensus_8226#3      TCGATTCGATCGAGCTATCAACGTAGCGCTACTGTGTATGTACTGTTTGTGTTCTTATCA 1198
consensus_8226#1      AGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCGCCGCCGCCTCCCACACCA 1415
consensus_8226#0      ------------------------------------------------------------
consensus_8226#4      ------------------------------------------------------------
                                                                                  

consensus_8226#2      -------------------
consensus_8226#3      AACTCTAC----------- 1206
consensus_8226#1      AGCAGAAGCAGCAGCAGCA 1434
consensus_8226#0      -------------------
consensus_8226#4      -------------------
                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)