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Oryza sativa
cluster # 823 cluster # 823       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_823#0 length = 2033 sequences # 2  

consensusID : consensus_823#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2033
fasta sequence
                              [TAGGGGCCGTGGCCGGATCGCAATGTCGGCGTCGGGGGGATTGAGCTTGGTGCGCCGCGCCGTCGAGGCCGCGCGCCGCACGCCGCGGTGGCAGAAGAGGCTCCTCGTCCTCACCGCCGGTGTTGGTTCTTTGACTTATGCTTGCCAGGATAATCAAGTACTTCAAATAAATGATGGAACTGGCAAGAAGAGGGTGGTTATCGTTGGAACTGGTTGGGCAGGCGCAAGTTTCTTGAGAAATATTGACACTTCCTTGTACGATGTTCATGTCGTATCACCTCGCAACTATTTTACCTTCACACCTTTGTTGCCTAGTGTGACATGTGGCACAGTTGAAGCACGTAGTATTGTAGAGCCTATCCGTAATATTGTGAGAAAGAGAGGCGGCGCATTTAGATTTTGGGAAGCAGAGTGCTACAAGATTGATCCAACTAACAAAAAGATCCACTGCAGATCAGACTCAGATGGAAATAGTGAATTTGTTGTAGATTATGATTACCTGGTCGTCAGTGTTGGAGCTAGACCTAATACATTCAATACCCCTGGTGTTGTTGAAAACTGCCATTTTCTAAAGGAAGTAGAAGATGCTCAAAAAATTAGGAAGAGTGTCCTGAAATGTTTCGAAAGAGCGTCCCTTCCAAACCTAACTGAGGAAGAGAGGAAGAAGAATCTTCATTTTGTTGTTATTGGTGGTGGCCCAACAGGTGTAGAATTTGCTGCAGAGCTTCATGACTTTGTCAATGAGGACTTGGCAAAGTTGTATCCTGATGTGAAGAAGTATGCGAATATTTCAGTAATTGAAGCTGGAGATCATATCCTTACAATGTTTGACAAGAGAATTACCCAATTTGCTGAAGATAAATTCAAGAGGACAGGCATAGATTTGAAGACGAATTTTAAGGTTGTGAAGGTGTCTGATAAGGCTATCACTATGACTAATTCTGCAACTGGAGAGATTGCTGTGCCTTATGGCATGGCTGTTTGGTCCACTGGTATTGGAACCCGTCCCCTCATAATGGATTTCATGAAGCAAGTTGGTCAGGCAAACCGACGAGTGCTAGCTACTGATGAATGGCTCAGGGTTCATGGATGTGATGATGTATATGCTCTCGGTGATTGCGCGACAATAACTCAAAGAAAAGTTATGGAAGATATTGCTTCAATTTTCCGGGTAGCAGACAAGGACAATTCTGGCTCTTTGACTGTCAAGAAAATTAAAAATGTTCTTGGCGACATCTATGAAAGGTACCCACAGGTTGAGTTGTACCTTAAAACTAACCAAATGAAGGACTTCCATGACCTACTCAAAGATTCAGACGGGAATGCTATTAAGGAGTCAAAAGAGCTGAACATAGAGGAATTCAAGAAAGCCCTTGCTCGAGTGGACTCGCAAGTTAAGATGCTCCCAGCAACAGCTCAGGTTGCTTCACAAGAGGGAGCCTATCTGGCAAACTGCTTCAACAAGATGAAATACTGTGAAGAGAACCCTGAAGGTCCGTTGAGGATCAGAGGCACAGGGCGTCATCGGTTCAAACCTTTCAGGTACAGGCACCTTGGCCAGTTTGCTCCACTGGGTGGAGAGCAAACAGCCGCTCAATTGCCGGGTGATTGGATACATGTTGGTCACAGCACCCAATGGCTATGGTATTCTGTCTATGCCAGTAAGCAATTCAGCTGGCGCACCAGGATGCTGGTAGTATCTGATTGGGGCAGGCGGTTCATCTATGGAAGGGACTCAAGCAGCCTATAAATTGAACTAGG-ATGGTGTTGTTCACCGCCCTGCATTTTGCCAACTGAAGCTCTATTAGACTTGGATAATACAATTTTTGCATACCTTCGGAAACAACTATTTTTGCATACAGCATCATTTTTTTTAGAGAGAGAGAGCATCGTTATATTTGTTCGGCTATTTTCACAAGCTCAGGTTTCTGTAGCGTAGCAAGGTTTTGTCACCAATTTTTGATCTTGCCGATATTTCTATGACACAATGGAGGTTAAATGATTTATACATCAGTACTTTATAATACAGTTCA]

[+] EMBL AK100884             [TAGGGGCCGTGGCCGGATCGCAATGTCGGCGTCGGGGGGATTGAGCTTGGTGCGCCGCGCCGTCGAGGCCGCGCGCCGCACGCCGCGGTGGCAGAAGAGGCTCCTCGTCCTCACCGCCGGTGTTGGTTCTTTGACTTATGCTTGCCAGGATAATCAAGTACTTCAAATAAATGATGGAACTGGCAAGAAGAGGGTGGTTATCGTTGGAACTGGTTGGGCAGGCGCAAGTTTCTTGAGAAATATTGACACTTCCTTGTACGATGTTCATGTCGTATCACCTCGCAACTATTTTACCTTCACACCTTTGTTGCCTAGTGTGACATGTGGCACAGTTGAAGCACGTAGTATTGTAGAGCCTATCCGTAATATTGTGAGAAAGAGAGGCGGCGCATTTAGATTTTGGGAAGCAGAGTGCTACAAGATTGATCCAACTAACAAAAAGATCCACTGCAGATCAGACTCAGATGGAAATAGTGAATTTGTTGTAGATTATGATTACCTGGTCGTCAGTGTTGGAGCTAGACCTAATACATTCAATACCCCTGGTGTTGTTGAAAACTGCCATTTTCTAAAGGAAGTAGAAGATGCTCAAAAAATTAGGAAGAGTGTCCTGAAATGTTTCGAAAGAGCGTCCCTTCCAAACCTAACTGAGGAAGAGAGGAAGAAGAATCTTCATTTTGTTGTTATTGGTGGTGGCCCAACAGGTGTAGAATTTGCTGCAGAGCTTCATGACTTTGTCAATGAGGACTTGGCAAAGTTGTATCCTGATGTGAAGAAGTATGCGAATATTTCAGTAATTGAAGCTGGAGATCATATCCTTACAATGTTTGACAAGAGAATTACCCAATTTGCTGAAGATAAATTCAAGAGGACAGGCATAGATTTGAAGACGAATTTTAAGGTTGTGAAGGTGTCTGATAAGGCTATCACTATGACTAATTCTGCAACTGGAGAGATTGCTGTGCCTTATGGCATGGCTGTTTGGTCCACTGGTATTGGAACCCGTCCCCTCATAATGGATTTCATGAAGCAAGTTGGTCAGGCAAACCGACGAGTGCTAGCTACTGATGAATGGCTCAGGGTTCATGGATGTGATGATGTATATGCTCTCGGTGATTGCGCGACAATAACTCAAAGAAAAGTTATGGAAGATATTGCTTCAATTTTCCGGGTAGCAGACAAGGACAATTCTGGCTCTTTGACTGTCAAGAAAATTAAAAATGTTCTTGGCGACATCTATGAAAGGTACCCACAGGTTGAGTTGTACCTTAAAACTAACCAAATGAAGGACTTCCATGACCTACTCAAAGATTCAGACGGGAATGCTATTAAGGAGTCAAAAGAGCTGAACATAGAGGAATTCAAGAAAGCCCTTGCTCGAGTGGACTCGCAAGTTAAGATGCTCCCAGCAACAGCTCAGGTTGCTTCACAAGAGGGAGCCTATCTGGCAAACTGCTTCAACAAGATGAAATACTGTGAAGAGAACCCTGAAGGTCCGTTGAGGATCAGAGGCACAGGGCGTCATCGGTTCAAACCTTTCAGGTACAGGCACCTTGGCCAGTTTGCTCCACTGGGTGGAGAGCAAACAGCCGCTCAATTGCCGGGTGATTGGATACATGTTGGTCACAGCACCCAATGGCTATGGTATTCTGTCTATGCCAGTAAGCAATTCAGCTGGCGCACCAGGATGCTGGTAGTATCTGATTGGGGCAGGCGGTTCATCTATGGAAGGGACTCAAGCAGCCTATAAATTGAACTAGG ATGGTGTTGTTCACCGCCCTGCATTTTGCCAACTGAAGCTCTATTAGACTTGGATAATACAATTTTTGCATACCTTCGGAAACAACTATTTTTGCATACAGCATCATTTTTTTTAGAGAGAGAGAGCATCGTTATATTTGTTCGGCTATTTTCACAAGCTCAGGTTTCTGTAGCGTAGCAAGGTTTTGTCACCAATTTTTGATCTTGCCGATATTTCTATGACACAATGGAGGTTAAATGATTTATACATCAGTACTTTATAATACAGTTCA]
[+] EMBL AA751652             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAACTAGGCATGGTGTTGTTCACCGCCCTGCATTTTGCCAACTGAAGCTCTATTANACTTGGATAATACAATTTTTGCATACCTTCGGAAACAACTATTTTTGCATACAGCATCATTTTTTTTANAAANANANANCATCGTTATATTTGTTCGGCTATTTTCACAAGCTCAGGTTTCTGTAGCGTANCAAGGTTTTGTCACCAATTTTTGATCTTGCCGATATTTCTATGACACAATGGAGGTTAAATG                                ]


>consensus_823#0 TAGGGGCCGTGGCCGGATCGCAATGTCGGCGTCGGGGGGATTGAGCTTGGTGCGCCGCGC CGTCGAGGCCGCGCGCCGCACGCCGCGGTGGCAGAAGAGGCTCCTCGTCCTCACCGCCGG TGTTGGTTCTTTGACTTATGCTTGCCAGGATAATCAAGTACTTCAAATAAATGATGGAAC TGGCAAGAAGAGGGTGGTTATCGTTGGAACTGGTTGGGCAGGCGCAAGTTTCTTGAGAAA TATTGACACTTCCTTGTACGATGTTCATGTCGTATCACCTCGCAACTATTTTACCTTCAC ACCTTTGTTGCCTAGTGTGACATGTGGCACAGTTGAAGCACGTAGTATTGTAGAGCCTAT CCGTAATATTGTGAGAAAGAGAGGCGGCGCATTTAGATTTTGGGAAGCAGAGTGCTACAA GATTGATCCAACTAACAAAAAGATCCACTGCAGATCAGACTCAGATGGAAATAGTGAATT TGTTGTAGATTATGATTACCTGGTCGTCAGTGTTGGAGCTAGACCTAATACATTCAATAC CCCTGGTGTTGTTGAAAACTGCCATTTTCTAAAGGAAGTAGAAGATGCTCAAAAAATTAG GAAGAGTGTCCTGAAATGTTTCGAAAGAGCGTCCCTTCCAAACCTAACTGAGGAAGAGAG GAAGAAGAATCTTCATTTTGTTGTTATTGGTGGTGGCCCAACAGGTGTAGAATTTGCTGC AGAGCTTCATGACTTTGTCAATGAGGACTTGGCAAAGTTGTATCCTGATGTGAAGAAGTA TGCGAATATTTCAGTAATTGAAGCTGGAGATCATATCCTTACAATGTTTGACAAGAGAAT TACCCAATTTGCTGAAGATAAATTCAAGAGGACAGGCATAGATTTGAAGACGAATTTTAA GGTTGTGAAGGTGTCTGATAAGGCTATCACTATGACTAATTCTGCAACTGGAGAGATTGC TGTGCCTTATGGCATGGCTGTTTGGTCCACTGGTATTGGAACCCGTCCCCTCATAATGGA TTTCATGAAGCAAGTTGGTCAGGCAAACCGACGAGTGCTAGCTACTGATGAATGGCTCAG GGTTCATGGATGTGATGATGTATATGCTCTCGGTGATTGCGCGACAATAACTCAAAGAAA AGTTATGGAAGATATTGCTTCAATTTTCCGGGTAGCAGACAAGGACAATTCTGGCTCTTT GACTGTCAAGAAAATTAAAAATGTTCTTGGCGACATCTATGAAAGGTACCCACAGGTTGA GTTGTACCTTAAAACTAACCAAATGAAGGACTTCCATGACCTACTCAAAGATTCAGACGG GAATGCTATTAAGGAGTCAAAAGAGCTGAACATAGAGGAATTCAAGAAAGCCCTTGCTCG AGTGGACTCGCAAGTTAAGATGCTCCCAGCAACAGCTCAGGTTGCTTCACAAGAGGGAGC CTATCTGGCAAACTGCTTCAACAAGATGAAATACTGTGAAGAGAACCCTGAAGGTCCGTT GAGGATCAGAGGCACAGGGCGTCATCGGTTCAAACCTTTCAGGTACAGGCACCTTGGCCA GTTTGCTCCACTGGGTGGAGAGCAAACAGCCGCTCAATTGCCGGGTGATTGGATACATGT TGGTCACAGCACCCAATGGCTATGGTATTCTGTCTATGCCAGTAAGCAATTCAGCTGGCG CACCAGGATGCTGGTAGTATCTGATTGGGGCAGGCGGTTCATCTATGGAAGGGACTCAAG CAGCCTATAAATTGAACTAGGATGGTGTTGTTCACCGCCCTGCATTTTGCCAACTGAAGC TCTATTAGACTTGGATAATACAATTTTTGCATACCTTCGGAAACAACTATTTTTGCATAC AGCATCATTTTTTTTAGAGAGAGAGAGCATCGTTATATTTGTTCGGCTATTTTCACAAGC TCAGGTTTCTGTAGCGTAGCAAGGTTTTGTCACCAATTTTTGATCTTGCCGATATTTCTA TGACACAATGGAGGTTAAATGATTTATACATCAGTACTTTATAATACAGTTCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)