cluster # 8245

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Oryza sativa
cluster # 8245 cluster # 8245 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8245#0 length = 1385 sequences # 5
consensusID : consensus_8245#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1385
fasta sequence
                              [GCGCGTGCGCGTCTCTCGGTTCTGTGAATTGTGAGAGATTGCCTCCGCTTCCGTTGCTATTTTATCGTCTTCAATTTTCTTCCCCCCCTTGGAGAGATAAGGCCGTGGCATCATTGCCGCCATCACCAATCCCATCATCACCTCTCCTCATCCAGAGGCAGAGGAGGCATTTTCTGTTC-GTCTTCTTGACCCTTCTTCTGCTTCCTTTATA---------AGATTGCAATGTCGTCGCCGGACAAGGTGGTGGCCAGGA-CGGGCCGCCTCAGGCAGCGCTACGACAACGAGTACCGCCTCGTCGCAGGCTGCGTGCCGTACCGGGTGAAGAAAGACGAGGCCAACCCTCGCATCCTCGGCGACGTTCCGGGCCAGGTGGAGGTGCTCATGGTCTCCACCCCCAACCGCGCCGACATGGTCTTCCCCAAGGGTGGATGGGAGGACGACGAGGAGGTGTACGAGGCGGCGTCCCGCGAGGCCATGGAGGAGGCCGGCGTCAAGGGCATCGTCAATAGGACTACCTTGGGACACTGGGTGTTCAAGAGCAAGAGCAGCCAGAACAGCAGCAGCCCAAGGGGAGCTTGCAAGGGCTACATCTTCGCCATGGAGGTCACTGAGGAGCTCGAGTCGTGGCCGGAGCAGGCGACCCATGGCCGTCGATGGGTCTCCCCCGGTGAAGCCTACCAGCTCTGCCGGTACGAATGGATGCGCGAGGCGCTCACCGCTCTGCTGGAGCGG-TTG-TCGATGAT-CGAGCCGGTGCCGTCTGCGCAGG-AACTGTCT-GATCAAACTAG-CATGTACAT-GATGCTGCAGG-CATCATCTGATAGCGCGGTCG-CGCTGTGCTGATTGATGATGATGATGATGCTGATGCTGTGGA-TAAAACTGATGAACGCAGAGGCGTGCAACTAGTATAGCTGTCAATCCCCTTCAACCGCAAACATGGCTACCAGAAAATTCAGAATCTCTAATCACTTCTTTAGAATCTTTCTTTTTTTTTTCTTGAGCAGCTAGTGATGAGTCTGTAATACCTGCAGTTGTTGCCCTGCTTGAACAACTGCACATTGTCTAAGAAAGATTCTATGACCTGAACCCCTCAGCTCCAGGCACTTCCATCCACAACTTTGGTATTGGTTGGCTTCGGAGGTTAAGGCAAAAAACTGTTTCATAGGTGACTGAAACTTTAACCTCTGTGGATGCATATTGCAGTGTCCATTTGCATGATCAATCCAATGTCTGCTGATGACTGGGGTCTCCTGTGTAATTCTTCTGTGTAATATTCAAAAATTAGTAAGGTATATAACATGTTTGCATGTGTTCATGTGTTGTATATGCCTTCAATATCCTTAGATGGACTTTCTGTATAGATGAAATGTTCTGAACAATAACAAATTTTATAT]

[+] EMBL AK072610             [GCGCGTGCGCGTCTCTCGGTTCTGTGAATTGTGAGAGATTGCCTCCGCTTCCGTTGCTATTTTATCGTCTTCAATTTTCTTCCCCCCCTTGGAGAGATAAGGCCGTGGCATCATTGCCGCCATCACCAATCCCATCATCACCTCTCCTCATCCAGAGGCAGAGGAGGCATTTTCTGTTC GTCTTCTTGACCCTTCTTCTGCTTCCTTTATA         AGATTGCAATGTCGTCGCCGGACAAGGTGGTGGCCAGGA CGGGCCGCCTCAGGCAGCGCTACGACAACGAGTACCGCCTCGTCGCAGGCTGCGTGCCGTACCGGGTGAAGAAAGACGAGGCCAACCCTCGCATCCTCGGCGACGTTCCGGGCCAGGTGGAGGTGCTCATGGTCTCCACCCCCAACCGCGCCGACATGGTCTTCCCCAAGGGTGGATGGGAGGACGACGAGGAGGTGTACGAGGCGGCGTCCCGCGAGGCCATGGAGGAGGCCGGCGTCAAGGGCATCGTCAATAGGACTACCTTGGGACACTGGGTGTTCAAGAGCAAGAGCAGCCAGAACAGCAGCAGCCCAAGGGGAGCTTGCAAGGGCTACATCTTCGCCATGGAGGTCACTGAGGAGCTCGAGTCGTGGCCGGAGCAGGCGACCCATGGCCGTCGATGGGTCTCCCCCGGTGAAGCCTACCAGCTCTGCCGGTACGAATGGATGCGCGAGGCGCTCACCGCTCTGCTGGAGCGG TTG TCGATGAT CGAGCCGGTGCCGTCTGCGCAGG AACTGTCT GATCAAACTAG CATGTACAT GATGCTGCAGG CATCATCTGATAGCGCGGTCG CGCTGTGCTGATTGATGATGATGATGATGCTGATGCTGTGGA TAAAACTGATGAACGCAGAGGCGTGCAACTAGTATAGCTGTCAATCCCCTTCAACCGCAAACATGGCTACCAGAAAATTCAGAATCTCTAATCACTTCTTTAGAATCTTTCTTTTTTTTTTCTTGAGCAGCTAGTGATGAGTCTGTAATACCTGCAGTTGTTGCCCTGCTTGAACAACTGCACATTGTCTAAGAAAGATTCTATGACCTGAACCCCTCAGCTCCAGGCACTTCCATCCACAACTTTGGTATTGGTTGGCTTCGGAGGTTAAGGCAAAAAACTGTTTCATAGGTGACTGAAACTTTAACCTCTGTGGATGCATATTGCAGTGTCCATTTGCATGATCAATCCAATGTCTGCTGATGACTGGGGTCTCCTGTGTAATTCTTCTGTGTAATATTCAAAAATTAGTAAGGTATATAACATGTTTGCATGTGTT                                                                                 ]
[+] EMBL C74489               [   tngnCGCGTCTCTCGGTTCTGTGAATTGTGAGAGATTGCCTCCGCTTCCGTTGCTATTTTATCGTCTTCAATTTTCTTCCCCCCCTTGGAGAGATAAGGCCGTGGCATCATTGCCGCCATCACCAATCCCATCATCACCTCTCCTCATCCAGAGGCAGANGAGGCATTTTCTGTTC GTCTTCTTGA CCTTCTTCTGCTTCCTTTATA         AGATTGCAATGTCGTCGCCGGANAAGGTGGTGGCCAGGANGGGGCCGCtnaagga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C72189               [                                                                                                                                        ATCACCTCTCCTCATCCAGAGGCAGAGGAGGCATTTTCTGTTC GTCTTCTTGACCCTTCTTCTGCTTCCTTTATA         AGATTGCAATGTCGTCGCCGGACAAGGTGGTGGCCAGGA CGGGCCGCCTCAGGCAGCGCTACGACAACGAGTACCGCCTCGTCGCAGGCTGCGTGCCGTACCGGGTGAAGAAAGACGAGGCCAACCCTCGCATCCTCGGCGACGTTCCGGGCCAGGTGGAGGTGCTCATGGTCTCCACCCCCAACCGCGCCGACATGGTCTTCCCCAAGGGTGGATGGGAGGACGACGAGGAGGTGTACGAGGCGGCGTCCCGCGAGGCCATGGAGGAGGCCGGCGTCAAGGGCATCGTCAATAGGACTACCTTGGGACACTNGGTGTTCAAGAGCAAGAGCAG CAG ACAG AGCAG CCAAGGGGAGNTTc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C72954               [                                                                                                                                                     ATCCAGANGCAGAGGAGGCATTTTCTGTTCTGTCTTCTTGACCCTTCTTCTGCTTCCTTTATAAGGATCGGCAGATTNCAATGTCGTCGCCGGACAANGTGGTGGCCAGGA CGGGCCGCCTCAGGCAGCGCTACGACAACGAGTACCGCCTCGTCGCAGGCTGCGTGCCGTACCGGGTNAAGAAAGACGANGCCAACCCTCGCATCCTCGGCGACGTTCCGGGCCAGGTGGAGGTGCTCATGGTCTCCACCCCCAACCGCNCCGACATGGTCTTCCCCAAGGGTGGATGGGAGNACGACGAGGAGGTGTACGANGCGGCGTCCCGCGANGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU101204             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               acCGGTTTGCCCGATGATCCGACCCGGTGCCGTNTGCGCAGGAAACTGTCTGGATCAAACTAGCCATGTNCATGGATGCTGCAGGCCATCATCTGATAGCGCGGTCGCCGCTGTGCTGATTGATGATGATGATGATGCTGATGCTGTGGATTAAAACTGATGAACGCAGAGGCGTGCAACTAGTATAGCTGTCAANCCCCTTCAACCGCAAACATGGCTACCAGAAAATTCAGAATCTCTAATCACTTCTTTAGAATCTTTCTTTTTTTTTTCTTGAGCAGCTAGTGATGAGTCTGTAATACCTGCAGTTGTTGCCCTGCTTGAACAACTGCACATTGTCTAAGAAAGATTCTATGACCTGAACCCCTCAGCTCCAGGCACTTCCATCCACAACTTTGGTATTGGTTGGCTTCGGAGGTTAAGGCAAAAAACTGTTTCATAGGTGACTGAAACTTTAACCTCTGTGGATGCATATTGCAGTGTCCATTTGCATGATCAATCCAATGTCTGCTGATGACTGGGGTCTCCTGTGTAATTCTTCTGTGTAATATTCAAAAATTAGTAAGGTATATAACATGTTTGCATGTGTTCATGTGTTGTATATGCCTTCAATATCCTTAGATGGACTTTCTGTATAGATGAAATGTTCTGAACAATAACAAATTTTATAT]




>consensus_8245#0
GCGCGTGCGCGTCTCTCGGTTCTGTGAATTGTGAGAGATTGCCTCCGCTTCCGTTGCTAT
TTTATCGTCTTCAATTTTCTTCCCCCCCTTGGAGAGATAAGGCCGTGGCATCATTGCCGC
CATCACCAATCCCATCATCACCTCTCCTCATCCAGAGGCAGAGGAGGCATTTTCTGTTCG
TCTTCTTGACCCTTCTTCTGCTTCCTTTATAAGATTGCAATGTCGTCGCCGGACAAGGTG
GTGGCCAGGACGGGCCGCCTCAGGCAGCGCTACGACAACGAGTACCGCCTCGTCGCAGGC
TGCGTGCCGTACCGGGTGAAGAAAGACGAGGCCAACCCTCGCATCCTCGGCGACGTTCCG
GGCCAGGTGGAGGTGCTCATGGTCTCCACCCCCAACCGCGCCGACATGGTCTTCCCCAAG
GGTGGATGGGAGGACGACGAGGAGGTGTACGAGGCGGCGTCCCGCGAGGCCATGGAGGAG
GCCGGCGTCAAGGGCATCGTCAATAGGACTACCTTGGGACACTGGGTGTTCAAGAGCAAG
AGCAGCCAGAACAGCAGCAGCCCAAGGGGAGCTTGCAAGGGCTACATCTTCGCCATGGAG
GTCACTGAGGAGCTCGAGTCGTGGCCGGAGCAGGCGACCCATGGCCGTCGATGGGTCTCC
CCCGGTGAAGCCTACCAGCTCTGCCGGTACGAATGGATGCGCGAGGCGCTCACCGCTCTG
CTGGAGCGGTTGTCGATGATCGAGCCGGTGCCGTCTGCGCAGGAACTGTCTGATCAAACT
AGCATGTACATGATGCTGCAGGCATCATCTGATAGCGCGGTCGCGCTGTGCTGATTGATG
ATGATGATGATGCTGATGCTGTGGATAAAACTGATGAACGCAGAGGCGTGCAACTAGTAT
AGCTGTCAATCCCCTTCAACCGCAAACATGGCTACCAGAAAATTCAGAATCTCTAATCAC
TTCTTTAGAATCTTTCTTTTTTTTTTCTTGAGCAGCTAGTGATGAGTCTGTAATACCTGC
AGTTGTTGCCCTGCTTGAACAACTGCACATTGTCTAAGAAAGATTCTATGACCTGAACCC
CTCAGCTCCAGGCACTTCCATCCACAACTTTGGTATTGGTTGGCTTCGGAGGTTAAGGCA
AAAAACTGTTTCATAGGTGACTGAAACTTTAACCTCTGTGGATGCATATTGCAGTGTCCA
TTTGCATGATCAATCCAATGTCTGCTGATGACTGGGGTCTCCTGTGTAATTCTTCTGTGT
AATATTCAAAAATTAGTAAGGTATATAACATGTTTGCATGTGTTCATGTGTTGTATATGC
CTTCAATATCCTTAGATGGACTTTCTGTATAGATGAAATGTTCTGAACAATAACAAATTT
TATAT
clustalw multiple alignements is not computed in this case