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Oryza sativa
cluster # 8275 cluster # 8275       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8275#0 length = 2621 sequences # 5  

consensusID : consensus_8275#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2621
fasta sequence
                              [CTCCCATCTCCCATGGCAACCACGGCGGCGGCGTCGCCGCCGGCGATCGCGACCGCGCTCTCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCCAGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCACGGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCGTGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATCCGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAAGGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAGGACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCTCATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTTCACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGCCCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAAGTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAGGGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAACAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAATCCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGATCCTAACAACCGGATCCGTATGATTGCCACTCCTGGATCAGGCCATAGATATGCACGACATGCCGCTAGTAGGTATAAAGTAAGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGAACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACATACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATATCATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTGCTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGATGATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGTGGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCCGAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACTGCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGAGGGGCCAAAATGTTCTTAATCAGTAGGTCC-TGTGCTCTCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTT---TTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTTTCTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCCAAATCAGGCCGTAAGTCTGTAACTCAGGCCTGTGTTGGTCGCTGGGCTCAGAATTTTGCTGAGGAGCTCGAACAAGTGATTGAATACTCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCAGTTTACATGTACCCCTCAAGTTGATATATCTTACTCATACAAGTTAATGGGCAGATCTGCATCTAGCTGGAGAAATACAGTGTGTTCAGCCTTTGAGCAAACTATTGTACGAGCAGCTAATTTCTTACAAATTCTAAGCATCATGAATCCAACGATAGGACGATCACATCTTTTCCAGATCAACCTTTTCCATTACAATTGGATGATCACTTCTGCTTCTTAGGTTTCTTTGGTGGGTTCTTAGCAGGTGCGTCTCCTTCATCATCAGATAATCCCTCGATGGGTTCATCAGGGACATCAGCGGGAGCATTATGCTTGGTGATGTAGCCCTTCAGGATCTCCATGCTCTTCTCCTTCATAGCAGCCAGCTGCTCCGATAGAATACCGGACTCTGAACTGATTGCAAATGATTCTGTTCCAAGAACCAAGCTGGCTTTCACTCTTGAATCAAGACCTGCTGCAGCAGCTGTTTGGTCTTCCATCGACTCTTGAACCTTGAATCGTCGGGACGGCGGCGGCGACGCAGAGGAGAGGCGAACGAGACGAGCGCGCGGCGGCGGCGGCCGTCGGTGAATATGGCGACTCTTTGGCAAACACGCGGGAGGAAGAATGAGAGTTGGGTTGTGGTAGGGGGGAAAAGGA]

[+] EMBL AK072887             [CTCCCATCTCCCATGGCAACCACGGCGGCGGCGTCGCCGCCGGCGATCGCGACCGCGCTCTCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCCAGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCACGGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCGTGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATCCGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAAGGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAGGACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCTCATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTTCACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGCCCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAAGTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAGGGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAACAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAATCCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGATCCTAACAACCGGATCCGTATGATTGCCACTCCTGGATCAGGCCATAGATATGCACGACATGCCGCTAGTAGGTATAAAGTAAGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGAACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACATACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATATCATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTGCTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGATGATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGTGGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCCGAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACTGCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGAGGGGCCAAAATGTTCTTAATCAGTAGGTCC TGTGCTCTCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTT   TTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTTTCTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCCAAATCAGGCCGTAAGTCTGTAACTCAGGCCTGTGTTGGTCGCTGGGCTCAGAATTTTGCTGAGGAGCTCGAACAAGTGATTGAATACTCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB662780             [                            CGGCGTCGCCGCCGGCGATCGCGACCGCGCTCTCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCCAGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCACGGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCGTGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATCCGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAAGGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAGGACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCTCATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTTCACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGCCCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAAGTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAGGGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAACAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAATCCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB662781             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAGTAAGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGAACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACATACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATATCATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTGCTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGATGATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGTGGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCCGAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACTGCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGAGGGGCCAAAATGTTCTTAATCAGTAGGTCCTTGTGCTCTCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTT   TTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI806026             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGA GGGCC AAATGTGCTTAATCAGTAGGTCCTTGTGCTATCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTTTTGTTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCC AAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTTTGTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCC AATCA GCCGTAAGTCTGTAAaaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL AK110637             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCAGTTTACATGTACCCCTCAAGTTGATATATCTTACTCATACAAGTTAATGGGCAGATCTGCATCTAGCTGGAGAAATACAGTGTGTTCAGCCTTTGAGCAAACTATTGTACGAGCAGCTAATTTCTTACAAATTCTAAGCATCATGAATCCAACGATAGGACGATCACATCTTTTCCAGATCAACCTTTTCCATTACAATTGGATGATCACTTCTGCTTCTTAGGTTTCTTTGGTGGGTTCTTAGCAGGTGCGTCTCCTTCATCATCAGATAATCCCTCGATGGGTTCATCAGGGACATCAGCGGGAGCATTATGCTTGGTGATGTAGCCCTTCAGGATCTCCATGCTCTTCTCCTTCATAGCAGCCAGCTGCTCCGATAGAATACCGGACTCTGAACTGATTGCAAATGATTCTGTTCCAAGAACCAAGCTGGCTTTCACTCTTGAATCAAGACCTGCTGCAGCAGCTGTTTGGTCTTCCATCGACTCTTGAACCTTGAATCGTCGGGACGGCGGCGGCGACGCAGAGGAGAGGCGAACGAGACGAGCGCGCGGCGGCGGCGGCCGTCGGTGAATATGGCGACTCTTTGGCAAACACGCGGGAGGAAGAATGAGAGTTGGGTTGTGGTAGGGGGGAAAAGGA]


>consensus_8275#0 CTCCCATCTCCCATGGCAACCACGGCGGCGGCGTCGCCGCCGGCGATCGCGACCGCGCTC TCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCC AGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCAC GGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCG TGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATC CGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAA GGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAG GACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCT CATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTT CACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGC CCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAA GTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAG GGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAA CAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAAT CCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGATCCTAACAACCGGATCCGTATG ATTGCCACTCCTGGATCAGGCCATAGATATGCACGACATGCCGCTAGTAGGTATAAAGTA AGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGA ACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACA TACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATAT CATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTG CTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGAT GATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGT GGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCC GAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACT GCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGG AGGGGCCAAAATGTTCTTAATCAGTAGGTCCTGTGCTCTCCATATCTTCAACGAGTGACC AGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTT TTTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGA AAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAAC TAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTT TCTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCCAAATCAGGC CGTAAGTCTGTAACTCAGGCCTGTGTTGGTCGCTGGGCTCAGAATTTTGCTGAGGAGCTC GAACAAGTGATTGAATACTCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCAG TTTACATGTACCCCTCAAGTTGATATATCTTACTCATACAAGTTAATGGGCAGATCTGCA TCTAGCTGGAGAAATACAGTGTGTTCAGCCTTTGAGCAAACTATTGTACGAGCAGCTAAT TTCTTACAAATTCTAAGCATCATGAATCCAACGATAGGACGATCACATCTTTTCCAGATC AACCTTTTCCATTACAATTGGATGATCACTTCTGCTTCTTAGGTTTCTTTGGTGGGTTCT TAGCAGGTGCGTCTCCTTCATCATCAGATAATCCCTCGATGGGTTCATCAGGGACATCAG CGGGAGCATTATGCTTGGTGATGTAGCCCTTCAGGATCTCCATGCTCTTCTCCTTCATAG CAGCCAGCTGCTCCGATAGAATACCGGACTCTGAACTGATTGCAAATGATTCTGTTCCAA GAACCAAGCTGGCTTTCACTCTTGAATCAAGACCTGCTGCAGCAGCTGTTTGGTCTTCCA TCGACTCTTGAACCTTGAATCGTCGGGACGGCGGCGGCGACGCAGAGGAGAGGCGAACGA GACGAGCGCGCGGCGGCGGCGGCCGTCGGTGAATATGGCGACTCTTTGGCAAACACGCGG GAGGAAGAATGAGAGTTGGGTTGTGGTAGGGGGGAAAAGGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)