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Oryza sativa
cluster # 8289 cluster # 8289       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8289#0 length = 1874 sequences # 2  
consensus_8289#1 length = 749 sequences # 2  
consensus_8289#2 length = 665 sequences # 1  

consensusID : consensus_8289#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1874
fasta sequence
                              [CGAGCATTTGGTACCACCTATTTTGCATTGCCATCTTGTAAGAAACCTCAGCATCCACCAAGAGTTTCAGGCCGCACCAATGGCTTGTGCTCCAGATCCCAGCAATAACAAGAATAGCTCGTCGATTCTTCATCAGCAAGTGAAGAAAATTAGCAGCATTCCTTTTTCATGGGGAGCACATGCATGGGGTATAGGAAGAGAAGATCCAAGAAGGGCTATTCATGCTCTCAAGGTTGGGACAGCACTCACACTGGTCTCACTCCTGTACATACTTGAACCGTTGTTCAAGGGAGGGGGAAAGAATGCAATGTGGGCTGTGATGACCGTTGTTGTTGTGCTTGAATTTACTGCAGGTGCAACTATATGCAAAGGGCTGAATAGAGGGTTAGGAACAATCTTGGCAGGATCTCTAGCATTTATAATTGAACTTGTAGCAGTACGATCTGGAAAAGTATTCCGGGCTCTGTTTGTTGGATCATCAGTCTTTCTGATAGGATTTGCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAGAACTATGATTATGGGGTCGTGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCTACAGTACGCAAATTTGAAGGATTAGCAAGATCAATTGAAGCTTGTGTTACTGAGTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCAAGGGCTTCCATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGCACACTATGCAAGCTGGGAGCCAAGACATTCAATGCAATGTTACAGTTATCCATGGCAAAAGTATGTGAAGATTGGATCTGTTCTTAGGCACTTTGCATATACTGTCGCAGCACTTCATGGATGTCTAGAATCTGAGATTCAGACTCCACCATCCGTCAGGTCACTATTCCGAAACCCATGTACTAGAGTTGCACGAGAAGTGGTCAAGGTTTTACAAGAGCTTGCAGTAAGCATAAGAGATCATCATCGTTGTGCCCCTGATGTGCTGTCTGATCATCTTCATGAAGCACTACAGGATCTAAACTCGGCTATAAGATCACAGCCACGGCTCTTTCTCGGCTCCAAACATGCATGTGCAAATAGTCATGTGCTGATGGAATTAAATTCTAGCAAGCATACAGCCACAAGAACTACTCTACCATCATTCAAGACTGATGGCACATCCCTATTAGAAAGGAGGAATACAAAAGCAGACCAACCATCAGAACGGAATGAGCGGGGCACATTAAGGCCAACACTAAGTAAGATAGCCATGACAAGCCTTGAGTTCTCAGAAGCACTTCCATTCGCTGCGTTTGCTTCATTGTTGGTAGAAATGGTAGTTCGGCTGGAGATGGTTATTGAAGAAGTGAAGGAACTGGAGAGAGCAGCAAATTTTAGAGAATTCACTGGACATGACTATCTGACCATTGATCTTACTTCCAATGACAAGATGAGAAACCCAAATGGCGTACCATTAGACAGCCACACAATTTCCACTGCAGCTGAGTAAGTACTGAATAATAGATCAAATCAGTAGATGATCACTCTGAAGCAGATATGTATTTCTTTTTGGACTAAGAAAATATGGCCTGTGAGGCTGTGATTCCCAATAAATGTTGTTAGAATGACAACTCATAAAAAAACAATATTAAACCTACAGGATGTTTATCGGAGTTGGATGATGTAAAAAAAATTTCAGCAGAAAGTACTCATGC]

[+] EMBL AK073002             [CGAGCATTTGGTACCACCTATTTTGCATTGCCATCTTGTAAGAAACCTCAGCATCCACCAAGAGTTTCAGGCCGCACCAATGGCTTGTGCTCCAGATCCCAGCAATAACAAGAATAGCTCGTCGATTCTTCATCAGCAAGTGAAGAAAATTAGCAGCATTCCTTTTTCATGGGGAGCACATGCATGGGGTATAGGAAGAGAAGATCCAAGAAGGGCTATTCATGCTCTCAAGGTTGGGACAGCACTCACACTGGTCTCACTCCTGTACATACTTGAACCGTTGTTCAAGGGAGGGGGAAAGAATGCAATGTGGGCTGTGATGACCGTTGTTGTTGTGCTTGAATTTACTGCAGGTGCAACTATATGCAAAGGGCTGAATAGAGGGTTAGGAACAATCTTGGCAGGATCTCTAGCATTTATAATTGAACTTGTAGCAGTACGATCTGGAAAAGTATTCCGGGCTCTGTTTGTTGGATCATCAGTCTTTCTGATAGGATTTGCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAGAACTATGATTATGGGGTCGTGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCTACAGTACGCAAATTTGAAGGATTAGCAAGATCAATTGAAGCTTGTGTTACTGAGTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCAAGGGCTTCCATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGCACACTATGCAAGCTGGGAGCCAAGACATTCAATGCAATGTTACAGTTATCCATGGCAAAAGTATGTGAAGATTGGATCTGTTCTTAGGCACTTTGCATATACTGTCGCAGCACTTCATGGATGTCTAGAATCTGAGATTCAGACTCCACCATCCGTCAGGTCACTATTCCGAAACCCATGTACTAGAGTTGCACGAGAAGTGGTCAAGGTTTTACAAGAGCTTGCAGTAAGCATAAGAGATCATCATCGTTGTGCCCCTGATGTGCTGTCTGATCATCTTCATGAAGCACTACAGGATCTAAACTCGGCTATAAGATCACAGCCACGGCTCTTTCTCGGCTCCAAACATGCATGTGCAAATAGTCATGTGCTGATGGAATTAAATTCTAGCAAGCATACAGCCACAAGAACTACTCTACCATCATTCAAGACTGATGGCACATCCCTATTAGAAAGGAGGAATACAAAAGCAGACCAACCATCAGAACGGAATGAGCGGGGCACATTAAGGCCAACACTAAGTAAGATAGCCATGACAAGCCTTGAGTTCTCAGAAGCACTTCCATTCGCTGCGTTTGCTTCATTGTTGGTAGAAATGGTAGTTCGGCTGGAGATGGTTATTGAAGAAGTGAAGGAACTGGAGAGAGCAGCAAATTTTAGAGAATTCACTGGACATGACTATCTGACCATTGATCTTACTTCCAATGACAAGATGAGAAACCCAAATGGCGTACCATTAGACAGCCACACAATTTCCACTGCAGCTGAGTAAGTACTGAATAATAGATCAAATCAGTAGATGATCACTCTGAAGCAGATATGTATTTCTTTTTGGACTAAGAAAATATGGCCTGTGAGGCTGTGATTCCCAATAAATGTTGTTAGAATGACAACTCATAAAAAAACAATATTAAACCTACAGGATGTTTATCGGAGTTGGATGATGTAAAAAAAATTTCAGCAGAAAGTACTCAT  ]
[+] EMBL AK105742             [     ATTTGGTACCACCTATTTTGCATTGCCATCTTGTAAGAAACCTCAGCATCCACCAAGAGTTTCAGGCCGCACCAATGGCTTGTGCTCCAGATCCCAGCAATAACAAGAATAGCTCGTCGATTCTTCATCAGCAAGTGAAGAAAATTAGCAGGATTCCTTTTTCATGGGGAGCACATGCATGGGGTATAGGAAGAGAAGATCCAAGAAGGGCTATTCATGCTCTCAAGGTTGGGACAGCACTCACACTGGTCTCACTCCTGTACATACTTGAACCGTTGTTCAAGGGAGTGGGAAGGAATGCAATGTGGGCTGTGATGACCGTTGTTGTTGTGCTTGAATTTACTGCAGGTGCAACTATATGCAAAGGGCTGAATAGAGGGTTAGGAACAATCTTGGCAGGATCTCTAGCATTTATAATTGAACTTGTAGCAGTACGATCTGGAAAAGTATTCCGGGCTCTGTTTGTTGGATCATCAGTCTTTCTGATAGGATTTGCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAGAACTATGATTATGGGGTCGTGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCTACAGTACGCAAATTTGAAGGATTAGCAAGATCAATTGAAGCTTGTGTTACTGAGTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCAAGAGCTTCCATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGCACACTATGCAAGCTGGGAGCCAAGACATTCAATGCAATGTTACAGTTATCCATGGCAAAAGTATGTGAAGATTGGATCTGTTCTTAGGCACTTTGCATATACTGTCGCAGCACTTCATGGATGTCTAGAATCTGAGATTCAGACTCCACCATCCGTCAGGTCACTATTCCGAAACCCATGTACTAGAGTTGCACGAGAAGTGGTCAAGGCTTTACAAGAGCTTGCAGTAAGCATAAGAGATCATCATCGTTGTGCCCCTGATGTGCTGTCTGATCATCTTCATGAAGCACTACAGGATCTAAACTCGGCTATAAGATCACAGCCACGGCTCTTTCTCGGCTCCAAACATGCATGTGCAAATAGTCATGTGCTGATGGAATTAAATTCTAGCAAGCATACAGCCACAAGAACTACTCTACCATCATTCAAGACTGATGGCACATCCCTATTAGAAAGGAGGAATACAAAAGCAGACCAACCATCAGAACGGAATGAGCGGGGCACATTAAGGCCAACACTAAGTAAGATAGCCATGACAAGCCTTGAGTTCTCAGAAGCACTTCCATTCGCTGCGTTTGCTTCATTGTTGGTAGAAATGGTAGTTCGGCTGGAGATGGTTATTGAAGAAGTGAAGGAACTGGAGAGAGCAGCAAATTTTAGAGAATTCACTGGACATGACTATCTGACCATTGATCTTACTTCCAATGACAAGATGAGAAACCCAAATGGCGTACCATTAGACAGCCACACAATTTCCACTGCAGCTGAGTAAGTACTGGATAATAGATCAAATCAGTAGATGATCACTCTGAAGCAGATATGTATTTCTTTTTGGACTAAGAAAATATGGCCTGTGAGGCTGTGATTCCCAATAAATGTTGTTAGAATGACAACTCATAAAAAAACAATATTAAACCTACAGGATGTTTATCGGAGTTGGATGATGTAAAAAAAATTTCAGCAGAAAGTACTCATGC]


>consensus_8289#0 CGAGCATTTGGTACCACCTATTTTGCATTGCCATCTTGTAAGAAACCTCAGCATCCACCA AGAGTTTCAGGCCGCACCAATGGCTTGTGCTCCAGATCCCAGCAATAACAAGAATAGCTC GTCGATTCTTCATCAGCAAGTGAAGAAAATTAGCAGCATTCCTTTTTCATGGGGAGCACA TGCATGGGGTATAGGAAGAGAAGATCCAAGAAGGGCTATTCATGCTCTCAAGGTTGGGAC AGCACTCACACTGGTCTCACTCCTGTACATACTTGAACCGTTGTTCAAGGGAGGGGGAAA GAATGCAATGTGGGCTGTGATGACCGTTGTTGTTGTGCTTGAATTTACTGCAGGTGCAAC TATATGCAAAGGGCTGAATAGAGGGTTAGGAACAATCTTGGCAGGATCTCTAGCATTTAT AATTGAACTTGTAGCAGTACGATCTGGAAAAGTATTCCGGGCTCTGTTTGTTGGATCATC AGTCTTTCTGATAGGATTTGCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAGAA CTATGATTATGGGGTCGTGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTT CCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTG TGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCA CAGTTCTACAGTACGCAAATTTGAAGGATTAGCAAGATCAATTGAAGCTTGTGTTACTGA GTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCAAGGGCTTC CATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGCACA CTATGCAAGCTGGGAGCCAAGACATTCAATGCAATGTTACAGTTATCCATGGCAAAAGTA TGTGAAGATTGGATCTGTTCTTAGGCACTTTGCATATACTGTCGCAGCACTTCATGGATG TCTAGAATCTGAGATTCAGACTCCACCATCCGTCAGGTCACTATTCCGAAACCCATGTAC TAGAGTTGCACGAGAAGTGGTCAAGGTTTTACAAGAGCTTGCAGTAAGCATAAGAGATCA TCATCGTTGTGCCCCTGATGTGCTGTCTGATCATCTTCATGAAGCACTACAGGATCTAAA CTCGGCTATAAGATCACAGCCACGGCTCTTTCTCGGCTCCAAACATGCATGTGCAAATAG TCATGTGCTGATGGAATTAAATTCTAGCAAGCATACAGCCACAAGAACTACTCTACCATC ATTCAAGACTGATGGCACATCCCTATTAGAAAGGAGGAATACAAAAGCAGACCAACCATC AGAACGGAATGAGCGGGGCACATTAAGGCCAACACTAAGTAAGATAGCCATGACAAGCCT TGAGTTCTCAGAAGCACTTCCATTCGCTGCGTTTGCTTCATTGTTGGTAGAAATGGTAGT TCGGCTGGAGATGGTTATTGAAGAAGTGAAGGAACTGGAGAGAGCAGCAAATTTTAGAGA ATTCACTGGACATGACTATCTGACCATTGATCTTACTTCCAATGACAAGATGAGAAACCC AAATGGCGTACCATTAGACAGCCACACAATTTCCACTGCAGCTGAGTAAGTACTGAATAA TAGATCAAATCAGTAGATGATCACTCTGAAGCAGATATGTATTTCTTTTTGGACTAAGAA AATATGGCCTGTGAGGCTGTGATTCCCAATAAATGTTGTTAGAATGACAACTCATAAAAA AACAATATTAAACCTACAGGATGTTTATCGGAGTTGGATGATGTAAAAAAAATTTCAGCA GAAAGTACTCATGC



consensusID : consensus_8289#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 749
fasta sequence
                              [GCAAGATCATAGCTTATTGTGTTGGCTTTGTTTCCTTGACAGGATTTGCTGCAACATATTTGACATTCTTCCCATCCATTAAGAAGAACTATGATTATGGGGTCGTGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCAAAGAATGATTGCAGCTTGTGTTACTGAGTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCAAGAGCTTCCATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGTAAGGAACTATCCTTTTGATGATACATTTTTTTCCTTTTCTCTTGCAATCTCTCTCTATAAAGTGATGATGTGCAGATTACATACTGATTTCAATATTGGTACCAAATCGACCAGGCACACTATGCAAGCTGGGAGCCAAGACATTCAATGCAATGTTATAGTTATCCATGGCAAAAGTATGTGAAGATTGGATCTGTTCTTAGGCACTTTGCATATACTGTCGCAGCACTTCATGGATGTCTAGAATCTGAGATTCAGGTAACTGCATCAGCCCAATTTCTCGTGCATCATCCTGTTGTATATCCTTAGCAACTGACATATAAACATGAA]

[+] EMBL CB627876             [GCAAGATCATAGCTTATTGTGTTGGCTTTGTTTCCTTGACAGGATTTGCTGCAACATATTTGACATTCTTCCCATCCATTAAGAAGAACTATGATTATGGGGTCGTGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCAAAGAATGATTGCAGCTTGTGTTACTGAGTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCAAGAGCTTCCATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGTAAGGAACTATCCTTTTGATGATACATTTTTTTCCTTTTCTCTTGCAATCTCTCTCTATAAAGTGATGATGTGCAGATTACATACTGATTTCAATATTGGTACCAAATCGACCAGGCACACTATGCAAGCTGGGAGCCAAGACATTCAATGCAATGTTATAGTTATCCATGGCAAAAGTATGTGAAGATTGGATCTGTTCTTAGGCACTTTGCATATACTGTCGCAGCACTTCATGGATGTCTAGAATCTGAGATTCAGGTAACTGCATCAGCCCAATTTCTCGTGCATCATCCTGTTGTATATCCTTAGCAACTGACATATAAACATGAA]
[+] EMBL CB637002             [       CATTTCTTATTGTGTTGGCTTTGTTTCCTTGACAGGATTTGCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAGAACTATGATTATGGGGTCGTGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCAAAGAATGATTGCAGCTTGTGTTACTGAGTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCAAGAGCTTCCATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGTAAGGAACTATCCTTTTGATGATACATTTTTTTCCTTTTCTCTTGCAATCTCTCTCTATAAAGTGATGATGTGCAGATTACATACTGATTTCAAT                                                                                                                                                                                                                                            ]


>consensus_8289#1 GCAAGATCATAGCTTATTGTGTTGGCTTTGTTTCCTTGACAGGATTTGCTGCAACATATT TGACATTCTTCCCATCCATTAAGAAGAACTATGATTATGGGGTCGTGATTTTCCTGCTAA CTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGTGGTGCCTTTAGCACGAG ATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATTCATGAGTCTTTTTGTAT TGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCAAAGAATGATTGCAGCTTGTGTTACT GAGTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCAAGAGCT TCCATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGTA AGGAACTATCCTTTTGATGATACATTTTTTTCCTTTTCTCTTGCAATCTCTCTCTATAAA GTGATGATGTGCAGATTACATACTGATTTCAATATTGGTACCAAATCGACCAGGCACACT ATGCAAGCTGGGAGCCAAGACATTCAATGCAATGTTATAGTTATCCATGGCAAAAGTATG TGAAGATTGGATCTGTTCTTAGGCACTTTGCATATACTGTCGCAGCACTTCATGGATGTC TAGAATCTGAGATTCAGGTAACTGCATCAGCCCAATTTCTCGTGCATCATCCTGTTGTAT ATCCTTAGCAACTGACATATAAACATGAA



consensusID : consensus_8289#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 665
fasta sequence
                              [TTTTTTTTTTTTTTACTGCAAGATCATAGCTTATTGGGTTGGCTTTGTTTCCTTGACAGGATTTGCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAAAACTATGATTATGGGGTCGGGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCTACAGTACGCAAATTTGAAGGATTAGCAAGATCAATTGAAGGTGGGTAAATAGTAGATAGGAGCACTTATATGTTGCATCTTAAATAATAAGAGCATAGGTGCATAACAACTATCAAGAACCTTACCAAAGAATGATTGCAGCTTGTGTTACTGAGTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCAAGAGCTTCCATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGTAAGGAACTATCCTTTTGATGATACATTTTTTTCCTTTTCTCTTGCAATCTCTCTCTATAAAGNGATGATGGGCAGATTACATACTGATTTCAATATTGGTAC]

[+] EMBL CA759105             [TTTTTTTTTTTTTTACTGCAAGATCATAGCTTATTGGGTTGGCTTTGTTTCCTTGACAGGATTTGCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAAAACTATGATTATGGGGTCGGGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCTACAGTACGCAAATTTGAAGGATTAGCAAGATCAATTGAAGGTGGGTAAATAGTAGATAGGAGCACTTATATGTTGCATCTTAAATAATAAGAGCATAGGTGCATAACAACTATCAAGAACCTTACCAAAGAATGATTGCAGCTTGTGTTACTGAGTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCAAGAGCTTCCATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGTAAGGAACTATCCTTTTGATGATACATTTTTTTCCTTTTCTCTTGCAATCTCTCTCTATAAAGNGATGATGGGCAGATTACATACTGATTTCAATATTGGTAC]


>consensus_8289#2 TTTTTTTTTTTTTTACTGCAAGATCATAGCTTATTGGGTTGGCTTTGTTTCCTTGACAGG ATTTGCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAAAACTATGATTATGGGGT CGGGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGT GGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATT CATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCTACAGTACG CAAATTTGAAGGATTAGCAAGATCAATTGAAGGTGGGTAAATAGTAGATAGGAGCACTTA TATGTTGCATCTTAAATAATAAGAGCATAGGTGCATAACAACTATCAAGAACCTTACCAA AGAATGATTGCAGCTTGTGTTACTGAGTATTTCCAAGATCAAGACAAGGATGATAAAATT CTTGATAAGCAGGCATCAAGAGCTTCCATTCACATTGGTTATAGAGCAGTCCTTGACTCA AAATCAAGTGATGAAACCCTAGTAAGGAACTATCCTTTTGATGATACATTTTTTTCCTTT TCTCTTGCAATCTCTCTCTATAAAGNGATGATGGGCAGATTACATACTGATTTCAATATT GGTAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      CGAGCATTTGGTACCACCTATTTTGCATTGCCATCTTGTAAGAAACCTCAGCATCCACCA 60
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      AGAGTTTCAGGCCGCACCAATGGCTTGTGCTCCAGATCCCAGCAATAACAAGAATAGCTC 120
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      GTCGATTCTTCATCAGCAAGTGAAGAAAATTAGCAGCATTCCTTTTTCATGGGGAGCACA 180
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      TGCATGGGGTATAGGAAGAGAAGATCCAAGAAGGGCTATTCATGCTCTCAAGGTTGGGAC 240
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      AGCACTCACACTGGTCTCACTCCTGTACATACTTGAACCGTTGTTCAAGGGAGGGGGAAA 300
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      GAATGCAATGTGGGCTGTGATGACCGTTGTTGTTGTGCTTGAATTTACTGCAGGTGCAAC 360
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      TATATGCAAAGGGCTGAATAGAGGGTTAGGAACAATCTTGGCAGGATCTCTAGCATTTAT 420
                                                                                  

consensus_8289#1      -------------------------GCAAGATCAT----AGCTTATTGTGTTGGCTTT-- 29
consensus_8289#2      --------TTTTTTTTTTTTTTACTGCAAGATCAT----AGCTTATTGGGTTGGCTTT-- 46
consensus_8289#0      AATTGAACTTGTAGCAGTACGATCTGGAAAAGTATTCCGGGCTCTGTTTGTTGGATCATC 480
                                               * ** *  **     ***   *  ***** *    

consensus_8289#1      -GTTTCCTTGACAGGATTTGCTGCAACATATTTGACATTCTTCCCATCCATTAAGAAGAA 88
consensus_8289#2      -GTTTCCTTGACAGGATTTGCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAAAA 105
consensus_8289#0      AGTCTTTCTGATAGGATTTGCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAGAA 540
                       ** *   *** *********************** ********************* **

consensus_8289#1      CTATGATTATGGGGTCGTGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTT 148
consensus_8289#2      CTATGATTATGGGGTCGGGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTT 165
consensus_8289#0      CTATGATTATGGGGTCGTGATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTT 600
                      ***************** ******************************************

consensus_8289#1      CCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTG 208
consensus_8289#2      CCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTG 225
consensus_8289#0      CCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTG 660
                      ************************************************************

consensus_8289#1      TGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCA 268
consensus_8289#2      TGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCA 285
consensus_8289#0      TGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCA 720
                      ************************************************************

consensus_8289#1      CAGTTC------------------------------------------------------ 274
consensus_8289#2      CAGTTCTACAGTACGCAAATTTGAAGGATTAGCAAGATCAATTGAAGGTGGGTAAATAGT 345
consensus_8289#0      CAGTTCTACAGTACGCAAATTTGAAGGATTAGC--------------------------- 753
                      ******                                                      

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      AGATAGGAGCACTTATATGTTGCATCTTAAATAATAAGAGCATAGGTGCATAACAACTAT 405
consensus_8289#0      ------------------------------------------------------------
                                                                                  

consensus_8289#1      -------------AAAGAATGATTGCAGCTTGTGTTACTGAGTATTTCCAAGATCAAGAC 321
consensus_8289#2      CAAGAACCTTACCAAAGAATGATTGCAGCTTGTGTTACTGAGTATTTCCAAGATCAAGAC 465
consensus_8289#0      --------------AAGATCAATTGAAGCTTGTGTTACTGAGTATTTCCAAGATCAAGAC 799
                                    ****   **** **********************************

consensus_8289#1      AAGGATGATAAAATTCTTGATAAGCAGGCATCAAGAGCTTCCATTCACATTGGTTATAGA 381
consensus_8289#2      AAGGATGATAAAATTCTTGATAAGCAGGCATCAAGAGCTTCCATTCACATTGGTTATAGA 525
consensus_8289#0      AAGGATGATAAAATTCTTGATAAGCAGGCATCAAGGGCTTCCATTCACATTGGTTATAGA 859
                      *********************************** ************************

consensus_8289#1      GCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGTAAGGAA--CTATCCTTTTGATG 439
consensus_8289#2      GCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGTAAGGAA--CTATCCTTTTGATG 583
consensus_8289#0      GCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGCACACTATGCAAGCTGGGAGCCA 919
                      ************************************* *    *  * * *     *   

consensus_8289#1      ATACATTTTTTTCCTTTTCTCTTGCAATCTCTCTCTATA--AAGTGATGATGTGCAGATT 497
consensus_8289#2      ATACATTTTTTTCCTTTTCTCTTGCAATCTCTCTCTATA--AAGNGATGATGGGCAGATT 641
consensus_8289#0      AGACATTCAATGCAATGT-TACAGTTATCCATGGCAAAAGTATGTGAAGATTGGATCTGT 978
                      * *****   * *  * * *   *  ***  *  * * *  * * ** ***  *     *

consensus_8289#1      ACATACTGATTTCAATATTGGTACCAAATCGACCAGGCACACTATGCAAGCTGGGAGCCA 557
consensus_8289#2      ACATACTGATTTCAATATTGGTAC------------------------------------ 665
consensus_8289#0      TCTTAGGCACTTTGCATATACTGTCGCAGCACTTCATGGATGTCTAGAATCTGAGATTCA 1038
                       * **   * **      *  *                                      

consensus_8289#1      AGACATTCAATGCAATGTTATAGTTATCCATGGCAAAAGTATGTGAAGATTGGATCTGTT 617
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      GACTCCACCATCCGTCAGGTCACTATTCCGAAACCCATGTACTAGAGTTGCACGAGAAGT 1098
                                                                                  

consensus_8289#1      CTTAGGCACTTTGCATATACTGTCGCAGCACTTCATGGATGTCTAGAATCTGAGATTCAG 677
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      GGTCAAGGTTTTACAAGAGCTTGCAGTAAGCATAAGAGATCATCATCGTTGTGCCCCTGA 1158
                                                                                  

consensus_8289#1      GTAACTGCATCAGCCCAATTTCTCGTGCATCATCCTGTTGTATATCCTTAGCAACTGACA 737
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      TGTGCTGTCTGATCA----TCTTCATGAAGCACTACAGGATCTAAACTCGGCTATAAGAT 1214
                                                                                  

consensus_8289#1      TATAAACATGAA------------------------------------------------ 749
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      CACAGCCACGGCTCTTTCTCGGCTCCAAACATGCATGTGCAAATAGTCATGTGCTGATGG 1274
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      AATTAAATTCTAGCAAGCATACAGCCACAAGAACTACTCTACCATCATTCAAGACTGATG 1334
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      GCACATCCCTATTAGAAAGGAGGAATACAAAAGCAGACCAACCATCAGAACGGAATGAGC 1394
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      GGGGCACATTAAGGCCAACACTAAGTAAGATAGCCATGACAAGCCTTGAGTTCTCAGAAG 1454
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      CACTTCCATTCGCTGCGTTTGCTTCATTGTTGGTAGAAATGGTAGTTCGGCTGGAGATGG 1514
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      TTATTGAAGAAGTGAAGGAACTGGAGAGAGCAGCAAATTTTAGAGAATTCACTGGACATG 1574
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      ACTATCTGACCATTGATCTTACTTCCAATGACAAGATGAGAAACCCAAATGGCGTACCAT 1634
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      TAGACAGCCACACAATTTCCACTGCAGCTGAGTAAGTACTGAATAATAGATCAAATCAGT 1694
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      AGATGATCACTCTGAAGCAGATATGTATTTCTTTTTGGACTAAGAAAATATGGCCTGTGA 1754
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      GGCTGTGATTCCCAATAAATGTTGTTAGAATGACAACTCATAAAAAAACAATATTAAACC 1814
                                                                                  

consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
consensus_8289#0      TACAGGATGTTTATCGGAGTTGGATGATGTAAAAAAAATTTCAGCAGAAAGTACTCATGC 1874
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)