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Oryza sativa
cluster # 8291 cluster # 8291       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8291#0 length = 2330 sequences # 2  
consensus_8291#1 length = 2044 sequences # 3  

consensusID : consensus_8291#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2330
fasta sequence
                              [CCGACCCAAATCTAATCTAAACCCGTCCCCGTGGATTACGCATCATTACCCCGCATCTGCTCGTGGATTTTATTAGCTTCTCCTCTCGCTACGTTTGGGGTTTGGTTTTTGATGGGCTAATTATTAGCGGTGGTGGAACCTGAAAAGTCGCGTGTTTTGTGCTTTGCGTTTTGCTCGCTTGCCGTGTGTAGCGGTGGACTGGTGGCGTCGTTCGTGTCGCGCACCTTTTCTCTTTTTTTTTCTTCACCGGGACCAACTGGGGAAGAAAGATTTGGGGGGTTTTTGGCCGTTTCGGCGTCTCATCTTTCTTCTCGCCGCGCGCGCTCGTGTCCAGTCGCCGCCGTAGTTGTACGAGCGCTATCCTTGAGCTTTGGCTGCACGGGATTCATTGCAAGGGATGCGGTGGCCAGCGTCGTAACTTGCTCGTTTCAGATCGTGACGCTGTGGGGTTCTCTTTTTCAGTTACTGCTGCTACTGCCGGTACCGGCTGCCGAGGAGGGGAATGAGGATGAAGACGCTGGCGTGCTGCCGGCGGCGGCCGCAGGACTTCAGCATCGACATGGACCAGGAGCCTGACAGGGTGATGACGTACAATGGCCTTGAGAGCTGTATTATCAACAGTTCCTCTTATGACGATGATAGTGGCCTTAGTGCAACAACGGGAGCAGATGGGTGTGTAACCACTGATTCCGTTGATGATGAAGTCTCAAGTTGCTCCTCAAGTAAAGATGTTTCTAGCTCTTCGTTCTCTTCACAATGCCATCCACTGAGAAAGCAAGAGGAGCATTCACTTTACGAGTTGGATACACTCAGTGCTGTCCATCTACTTCCTCTCAAAGGGAAGAAGCCAATCACGTATACCTTGAGTGCTTCAGACATTGAAACCATGAAGGAGAAGTTTGGGAAGCTACTGCTTGGTGATGATGCTTCAGGAGGAGCTAGAGGTGTTTGTGCTGCTCTGGCTTTGTCCAATGCCATTATTAATCTCTCAGCCACTATATTTGGAGAACTCTGGAAGCTGGAACCACTCTGTGAAGAGAAAAAAGTCAGGTGGCGGAAGGAAATGGACTGGTTGCTTTCTCCTACAACCTACATGGTTGAGCTGGTTCCTACAAAACAAAATGGAGCAGACGGGTGCACGTTTGAGATTATGACCCCGAAAGCACGTTCAGATGTTAATGTGAACCTTCCTGCCCTTCAGAAGCTTGATTCCATGCTAATTGAAGTGCTGGACTCGATGGTAGACACAGAGTATTGGTATGTGGAGAGTGGTAGCCGAGCTAATGGCCGGGGCAAAAAGAATGGTCTGAGGCAGACGAAGAAGTGGTGGCTCCCATCACCTCGTGTGCCAGATATAGGGTTGTCTCAATTTCAGAGAAATAGGCTTGTTTTTCAGGCTAAGCTGGTTCATCAAATCCTCAAAGCTGCGATGTCAATCAATGAAGAAGTCCTGCTTCAGATACCTATTCCTCCAGCTGTCACGGATGCTCTTCCTAAGTCTGGCAGAGCTGGCTTGGGTGAAGACTTGTACCATGCTATAACCACAGAGTACATTCCCATAGAGGAAATTTTCCTCTCTCTTAGTTTAAAAACGGAGCATACCGTGCTCGAGACTATGAACCGGTTGGAGGGTGCAGTTTTTGCATGGAATCAAAGGATCTCAGAGGAAAAGAGCAAGAAATCCCCAGGAAGGCATT-CCTGGAATTTCATGAAGGATAGTTCATCAGAACTCGATAAGATGT-CCATGTGCATAGAAAGGGTTGAAACACTTATGCAGCTTCTG-AAATCCAGATTCCCGAGCCTTCCTCCAACTTTTATAGAAGTTGTAAAGATCCAATACAATGTGGACGTGGGGCATGCCATTGTGGAGGCCTACTCAAGGGTTCTTGTTGGGGTGGCATTCAGCATACTGTCCAGGGTAGCAGAGATTCTGCTGGAAGATGACCTGATCAAGAAGCCCAACACCCCTCTGGCCACACTCAAGTTCGACCTCTCCTCCGACGTGTACCTCGCCGGCATCACCGAGACGCCGCCGGGCCACATCCGGCGGTCGCTGATGGACCAGATCAGCCTGGTCGACGGCAGCCTCGACGCGGTCGTCAGGAAGAAGGGGGTGAAGCAGCTTAGGTGGTGAAAAAGGACATGAAGCTGTGAAGTTTTTCTTTTTGGCAGTTGTACAGGGTTTGTGATGATGATGCATGCTGTGCTGCGCGCTGGCTGGCTACATAAAGTTGGTTAAGTTCACCTTGCTAATACGTCCTGTATGGAACGGGCTAAATAGTGTATGCATGGTAAAAGCTNCTAGCATTGGCNGCAAAAAAAAAAAANAA]

[+] EMBL AK102962             [CCGACCCAAATCTAATCTAAACCCGTCCCCGTGGATTACGCATCATTACCCCGCATCTGCTCGTGGATTTTATTAGCTTCTCCTCTCGCTACGTTTGGGGTTTGGTTTTTGATGGGCTAATTATTAGCGGTGGTGGAACCTGAAAAGTCGCGTGTTTTGTGCTTTGCGTTTTGCTCGCTTGCCGTGTGTAGCGGTGGACTGGTGGCGTCGTTCGTGTCGCGCACCTTTTCTCTTTTTTTTTCTTCACCGGGACCAACTGGGGAAGAAAGATTTGGGGGGTTTTTGGCCGTTTCGGCGTCTCATCTTTCTTCTCGCCGCGCGCGCTCGTGTCCAGTCGCCGCCGTAGTTGTACGAGCGCTATCCTTGAGCTTTGGCTGCACGGGATTCATTGCAAGGGATGCGGTGGCCAGCGTCGTAACTTGCTCGTTTCAGATCGTGACGCTGTGGGGTTCTCTTTTTCAGTTACTGCTGCTACTGCCGGTACCGGCTGCCGAGGAGGGGAATGAGGATGAAGACGCTGGCGTGCTGCCGGCGGCGGCCGCAGGACTTCAGCATCGACATGGACCAGGAGCCTGACAGGGTGATGACGTACAATGGCCTTGAGAGCTGTATTATCAACAGTTCCTCTTATGACGATGATAGTGGCCTTAGTGCAACAACGGGAGCAGATGGGTGTGTAACCACTGATTCCGTTGATGATGAAGTCTCAAGTTGCTCCTCAAGTAAAGATGTTTCTAGCTCTTCGTTCTCTTCACAATGCCATCCACTGAGAAAGCAAGAGGAGCATTCACTTTACGAGTTGGATACACTCAGTGCTGTCCATCTACTTCCTCTCAAAGGGAAGAAGCCAATCACGTATACCTTGAGTGCTTCAGACATTGAAACCATGAAGGAGAAGTTTGGGAAGCTACTGCTTGGTGATGATGCTTCAGGAGGAGCTAGAGGTGTTTGTGCTGCTCTGGCTTTGTCCAATGCCATTATTAATCTCTCAGCCACTATATTTGGAGAACTCTGGAAGCTGGAACCACTCTGTGAAGAGAAAAAAGTCAGGTGGCGGAAGGAAATGGACTGGTTGCTTTCTCCTACAACCTACATGGTTGAGCTGGTTCCTACAAAACAAAATGGAGCAGACGGGTGCACGTTTGAGATTATGACCCCGAAAGCACGTTCAGATGTTAATGTGAACCTTCCTGCCCTTCAGAAGCTTGATTCCATGCTAATTGAAGTGCTGGACTCGATGGTAGACACAGAGTATTGGTATGTGGAGAGTGGTAGCCGAGCTAATGGCCGGGGCAAAAAGAATGGTCTGAGGCAGACGAAGAAGTGGTGGCTCCCATCACCTCGTGTGCCAGATATAGGGTTGTCTCAATTTCAGAGAAATAGGCTTGTTTTTCAGGCTAAGCTGGTTCATCAAATCCTCAAAGCTGCGATGTCAATCAATGAAGAAGTCCTGCTTCAGATACCTATTCCTCCAGCTGTCACGGATGCTCTTCCTAAGTCTGGCAGAGCTGGCTTGGGTGAAGACTTGTACCATGCTATAACCACAGAGTACATTCCCATAGAGGAAATTTTCCTCTCTCTTAGTTTAAAAACGGAGCATACCGTGCTCGAGACTATGAACCGGTTGGAGGGTGCAGTTTTTGCATGGAATCAAAGGATCTCAGAGGAAAAGAGCAAGAAATCCCCAGGAAGGCATT CCTGGAATTTCATGAAGGATAGTTCATCAGAACTCGATAAGATGT CCATGTGCATAGAAAGGGTTGAAACACTTATGCAGCTTCTG AAATCCAGATTCCCGAGCCTTCCTCCAACTTTTATAGAAGTTGTAAAGATCCAATACAATGTGGACGTGGGGCATGCCATTGTGGAGGCCTACTCAAGGGTTCTTGTTGGGGTGGCATTCAGCATACTGTCCAGGGTAGCAGAGATTCTGCTGGAAGATGACCTGATCAAGAAGCCCAACACCCCTCTGGCCACACTCAAGTTCGACCTCTCCTCCGACGTGTACCTCGCCGGCATCACCGAGACGCCGCCGGGCCACATCCGGCGGTCGCTGATGGACCAGATCAGCCTGGTCGACGGCAGCCTCGACGCGGTCGTCAGGAAGAAGGGGGTGAAGCAGCTTAGGTGGTGAAAAAGGACATGAAGCTGTGAAGTTTTTCTTTTTGGCAGTTGTACAGGGTTTGTGATGATGATGCATGCTGTGCTGCGCGCTGGCTGGCTACATAAAGTTGGTTAAGTTCACCTTGCTAATACGTCCTGTATGGAACGGGCTAAATAGTGTATGCATGGTAAA                                  ]
[+] EMBL AU031668             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ggaAAGNCATTCCCTGGAATTTCATGAAGGATAGTTCATCANAACTCGATAAGATTTCCCATGTGCATAGAAAGGTTTG AACACTTATGCAGCTTCTGAAAATCCAGATTCCCGAGCNTTCCTCCAACTTTTATAGAAGTTGTAAAGATCCAATACAATGTGGACGTGGGGCATGCCATTGTGGAGGCCTACTCAAGGGTTCTTGTTGGGGTGGCATTCAGCATACTGTCCAGGGTAGCAGAGATTCTGCTGGAAGATGACCTGATCAAGAAGCCCAACACCCCTCTGGCCACACTCAAGTTCGACCTCTCCTCCGACGTGTACCTCGCCGGCATCACCGAGACGCCGCCGGGCCACATCCGGCGGTCGCTGATGGACCAGATCAGCCTGGTCGACGGCAGCCTCGACGCGGTCGTCAGGAAGAAGGGGGTGAAGCAGCTTAGGTGGTGAAAAAGGACATGAAGCTGTGAAGTTTTTCTTTTTGGCNGTTGTACAGGGTTTGTGATGATGATGCATGCTGT NTGCGCGCTGGCTGGCTACATAAAGTTGGTTAAGTTCACCTTGCTAATACGTCCTGTATGGAACGGGCTAAATAGTGTATGCATGGTAAAAGCTNCTAGCATTGGCNGCAAAAAAAAAAAANAA]


>consensus_8291#0 CCGACCCAAATCTAATCTAAACCCGTCCCCGTGGATTACGCATCATTACCCCGCATCTGC TCGTGGATTTTATTAGCTTCTCCTCTCGCTACGTTTGGGGTTTGGTTTTTGATGGGCTAA TTATTAGCGGTGGTGGAACCTGAAAAGTCGCGTGTTTTGTGCTTTGCGTTTTGCTCGCTT GCCGTGTGTAGCGGTGGACTGGTGGCGTCGTTCGTGTCGCGCACCTTTTCTCTTTTTTTT TCTTCACCGGGACCAACTGGGGAAGAAAGATTTGGGGGGTTTTTGGCCGTTTCGGCGTCT CATCTTTCTTCTCGCCGCGCGCGCTCGTGTCCAGTCGCCGCCGTAGTTGTACGAGCGCTA TCCTTGAGCTTTGGCTGCACGGGATTCATTGCAAGGGATGCGGTGGCCAGCGTCGTAACT TGCTCGTTTCAGATCGTGACGCTGTGGGGTTCTCTTTTTCAGTTACTGCTGCTACTGCCG GTACCGGCTGCCGAGGAGGGGAATGAGGATGAAGACGCTGGCGTGCTGCCGGCGGCGGCC GCAGGACTTCAGCATCGACATGGACCAGGAGCCTGACAGGGTGATGACGTACAATGGCCT TGAGAGCTGTATTATCAACAGTTCCTCTTATGACGATGATAGTGGCCTTAGTGCAACAAC GGGAGCAGATGGGTGTGTAACCACTGATTCCGTTGATGATGAAGTCTCAAGTTGCTCCTC AAGTAAAGATGTTTCTAGCTCTTCGTTCTCTTCACAATGCCATCCACTGAGAAAGCAAGA GGAGCATTCACTTTACGAGTTGGATACACTCAGTGCTGTCCATCTACTTCCTCTCAAAGG GAAGAAGCCAATCACGTATACCTTGAGTGCTTCAGACATTGAAACCATGAAGGAGAAGTT TGGGAAGCTACTGCTTGGTGATGATGCTTCAGGAGGAGCTAGAGGTGTTTGTGCTGCTCT GGCTTTGTCCAATGCCATTATTAATCTCTCAGCCACTATATTTGGAGAACTCTGGAAGCT GGAACCACTCTGTGAAGAGAAAAAAGTCAGGTGGCGGAAGGAAATGGACTGGTTGCTTTC TCCTACAACCTACATGGTTGAGCTGGTTCCTACAAAACAAAATGGAGCAGACGGGTGCAC GTTTGAGATTATGACCCCGAAAGCACGTTCAGATGTTAATGTGAACCTTCCTGCCCTTCA GAAGCTTGATTCCATGCTAATTGAAGTGCTGGACTCGATGGTAGACACAGAGTATTGGTA TGTGGAGAGTGGTAGCCGAGCTAATGGCCGGGGCAAAAAGAATGGTCTGAGGCAGACGAA GAAGTGGTGGCTCCCATCACCTCGTGTGCCAGATATAGGGTTGTCTCAATTTCAGAGAAA TAGGCTTGTTTTTCAGGCTAAGCTGGTTCATCAAATCCTCAAAGCTGCGATGTCAATCAA TGAAGAAGTCCTGCTTCAGATACCTATTCCTCCAGCTGTCACGGATGCTCTTCCTAAGTC TGGCAGAGCTGGCTTGGGTGAAGACTTGTACCATGCTATAACCACAGAGTACATTCCCAT AGAGGAAATTTTCCTCTCTCTTAGTTTAAAAACGGAGCATACCGTGCTCGAGACTATGAA CCGGTTGGAGGGTGCAGTTTTTGCATGGAATCAAAGGATCTCAGAGGAAAAGAGCAAGAA ATCCCCAGGAAGGCATTCCTGGAATTTCATGAAGGATAGTTCATCAGAACTCGATAAGAT GTCCATGTGCATAGAAAGGGTTGAAACACTTATGCAGCTTCTGAAATCCAGATTCCCGAG CCTTCCTCCAACTTTTATAGAAGTTGTAAAGATCCAATACAATGTGGACGTGGGGCATGC CATTGTGGAGGCCTACTCAAGGGTTCTTGTTGGGGTGGCATTCAGCATACTGTCCAGGGT AGCAGAGATTCTGCTGGAAGATGACCTGATCAAGAAGCCCAACACCCCTCTGGCCACACT CAAGTTCGACCTCTCCTCCGACGTGTACCTCGCCGGCATCACCGAGACGCCGCCGGGCCA CATCCGGCGGTCGCTGATGGACCAGATCAGCCTGGTCGACGGCAGCCTCGACGCGGTCGT CAGGAAGAAGGGGGTGAAGCAGCTTAGGTGGTGAAAAAGGACATGAAGCTGTGAAGTTTT TCTTTTTGGCAGTTGTACAGGGTTTGTGATGATGATGCATGCTGTGCTGCGCGCTGGCTG GCTACATAAAGTTGGTTAAGTTCACCTTGCTAATACGTCCTGTATGGAACGGGCTAAATA GTGTATGCATGGTAAAAGCTNCTAGCATTGGCNGCAAAAAAAAAAAANAA



consensusID : consensus_8291#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2044
fasta sequence
                              [GCAGTGCCTCTGAGGTCTCTCTCTCTCTCTCACACACACACACGTCCTCTGGTCACCGACGCTCCTCCTACTACTAGTACAGTGTGATCGAGCCCCTCCTCACTTACCTTCGCCGAAGATCCATGGCGGAGGACTAAGCTCCGGCTGCTGATTTCTTCGCTTTGGACGCCCGCAAAAGTTACTGCTGCTACTGCCGGTACCGGCTGCCGAGGAGGGGAATGAGGATGAAGACGCTGGCGTGCTGCCGGCGGCGGCCGCAGGACTTCAGCATCGACATGGACCAGGAGCCTGACAGGGTGATGACGTACAATGGCCTTGAGAGCTGTATTATCAACAGTTCCTCTTATGACGATGATAGTGGCCTTAGTGCAACAACGGGAGCAGATGGGTGTGTAACCACTGATTCCGTTGATGATGAAGTCTCAAGTTGCTCCTCAAGTAAAGATGTTTCTAGCTCTTCGTTCTCTTCACAATGCCATCCACTGAGAAAGCAAGAGGAGCATTCACTTTACGAGTTGGATACACTCAGTGCTGTCCATCTACTTCCTCTCAAAGGGAAGAAGCCAATCACGTATACCTTGAGTGCTTCAGACATTGAAACCATGAAGGAGAAGTTTGGGAAGCTACTGCTTGGTGATGATGCTTCAGGAGGAGCTAGAGGTGTTTGTGCTGCTCTGGCTTTGTCCAATGCCATTATTAATCTCTCAGCCACTATATTTGGAGAACTCTGGAAGCTGGAACCACTCTGTGAAGAGAAAAAAGTCAGGTGGCGGAAGGAAATGGACTGGTTGCTTTCTCCTACAACCTACATGGTTGAGCTGGTTCCTAC-AAAACAAAATGGAGCAGACGGGTGCACGTTTGAGATTATGACCCCGAAAGCACGTTCAGATGTTAATGTGAACCTTCCTGCCCTTCAGAAGCTTGATTCCATGCTAATTGAAGTGCTGGACTCGATGGTAGACACAGAGTATTGGTATGTGGAGAGTGGTAGCCGAGCTAATGGCCGGGGCAAAAAGAATGGTCTGAGGCAGACGAAGAAGTGGTGGCTCCCATCACCTCGTGTGCCAGATATAGGGTTGTCTCAATTTCAGAGAAATAGGCTTGTTTTTCAGGCTAAGCTGGTTCATCAAATCCTCAAAGCTGCGATGTCAATCAATGAAGAAGTCCTGCTTCAGATACCTATTCCTCCAGCTGTCACGGATGCTCTTCCTAAGTCTGGCAGAGCTGGCTTGGGTGAAGACTTGTACCATGCTATAACCACAGAGTACATTCCCATAGAGGAAATTTTCCTCTCTCTTAGTTTAAAAACGGAGCATACCGTGCTCGAGACTATGAACCGGTTGGAGGGTGCAGTTTTTGCATGGAATCAAAGGATCTCAGAGGAAAAGAGCAAGAAATCCCCAGGAAGGCATTCCTGGAATTTCATGAAGGATAGTTCATCAGAACTCGATAAGATGTCCATGTGCATAGAAAGGGTTGAAACACTTATGCAGCTTCTGAAATCCAGATTCCCGAGCCTTCCTCCAACTTTTATAGAAGTTGTAAAGATCCAATACAATGTGGACGTGGGGCATGCCATTGTGGAGGCCTACTCAAGGGTTCTTGTTGGGGTGGCATTCAGCATACTGTCCAGGGTAGCAGAGATTCTGCTGGAAGATGACCTGATCAAGAAGCCCAACACCCCTCTGGCCACACTCAAGTTCGACCTCTCCTCCGACGTGTACCTCGCCGGCATCACCGAGACGCCGCCGGGCCACATCCGGCGGTCGCTGATGGACCAGATCAGCCTGGTCGACGGCAGCCTCGACGCGGTCGTCAGGAAGAAGGGGGTGAAGCAGCTTAGGTGGTGAAAAAGGACATGAAGCTGTGAAGTTTTTCTTTTTGGCAGTTGTACAGGGTTTGTGATGATGATGCATGCTGTGCTGCGCGCTGGCTGGCTACATAAAGTTGGTTAAGTTCACCTTGCTAATACGTCCTGTATGGAACGGGCTAAATAGTGTATGCATGGTAAAAGCTACTAGCATTGGCCGCATCGTACATCAAC]

[+] EMBL AK102549             [GCAGTGCCTCTGAGGTCTCTCTCTCTCTCTCACACACACACACGTCCTCTGGTCACCGACGCTCCTCCTACTACTAGTACAGTGTGATCGAGCCCCTCCTCACTTACCTTCGCCGAAGATCCATGGCGGAGGACTAAGCTCCGGCTGCTGATTTCTTCGCTTTGGACGCCCGCAAAAGTTACTGCTGCTACTGCCGGTACCGGCTGCCGAGGAGGGGAATGAGGATGAAGACGCTGGCGTGCTGCCGGCGGCGGCCGCAGGACTTCAGCATCGACATGGACCAGGAGCCTGACAGGGTGATGACGTACAATGGCCTTGAGAGCTGTATTATCAACAGTTCCTCTTATGACGATGATAGTGGCCTTAGTGCAACAACGGGAGCAGATGGGTGTGTAACCACTGATTCCGTTGATGATGAAGTCTCAAGTTGCTCCTCAAGTAAAGATGTTTCTAGCTCTTCGTTCTCTTCACAATGCCATCCACTGAGAAAGCAAGAGGAGCATTCACTTTACGAGTTGGATACACTCAGTGCTGTCCATCTACTTCCTCTCAAAGGGAAGAAGCCAATCACGTATACCTTGAGTGCTTCAGACATTGAAACCATGAAGGAGAAGTTTGGGAAGCTACTGCTTGGTGATGATGCTTCAGGAGGAGCTAGAGGTGTTTGTGCTGCTCTGGCTTTGTCCAATGCCATTATTAATCTCTCAGCCACTATATTTGGAGAACTCTGGAAGCTGGAACCACTCTGTGAAGAGAAAAAAGTCAGGTGGCGGAAGGAAATGGACTGGTTGCTTTCTCCTACAACCTACATGGTTGAGCTGGTTCCTAC AAAACAAAATGGAGCAGACGGGTGCACGTTTGAGATTATGACCCCGAAAGCACGTTCAGATGTTAATGTGAACCTTCCTGCCCTTCAGAAGCTTGATTCCATGCTAATTGAAGTGCTGGACTCGATGGTAGACACAGAGTATTGGTATGTGGAGAGTGGTAGCCGAGCTAATGGCCGGGGCAAAAAGAATGGTCTGAGGCAGACGAAGAAGTGGTGGCTCCCATCACCTCGTGTGCCAGATATAGGGTTGTCTCAATTTCAGAGAAATAGGCTTGTTTTTCAGGCTAAGCTGGTTCATCAAATCCTCAAAGCTGCGATGTCAATCAATGAAGAAGTCCTGCTTCAGATACCTATTCCTCCAGCTGTCACGGATGCTCTTCCTAAGTCTGGCAGAGCTGGCTTGGGTGAAGACTTGTACCATGCTATAACCACAGAGTACATTCCCATAGAGGAAATTTTCCTCTCTCTTAGTTTAAAAACGGAGCATACCGTGCTCGAGACTATGAACCGGTTGGAGGGTGCAGTTTTTGCATGGAATCAAAGGATCTCAGAGGAAAAGAGCAAGAAATCCCCAGGAAGGCATTCCTGGAATTTCATGAAGGATAGTTCATCAGAACTCGATAAGATGTCCATGTGCATAGAAAGGGTTGAAACACTTATGCAGCTTCTGAAATCCAGATTCCCGAGCCTTCCTCCAACTTTTATAGAAGTTGTAAAGATCCAATACAATGTGGACGTGGGGCATGCCATTGTGGAGGCCTACTCAAGGGTTCTTGTTGGGGTGGCATTCAGCATACTGTCCAGGGTAGCAGAGATTCTGCTGGAAGATGACCTGATCAAGAAGCCCAACACCCCTCTGGCCACACTCAAGTTCGACCTCTCCTCCGACGTGTACCTCGCCGGCATCACCGAGACGCCGCCGGGCCACATCCGGCGGTCGCTGATGGACCAGATCAGCCTGGTCGACGGCAGCCTCGACGCGGTCGTCAGGAAGAAGGGGGTGAAGCAGCTTAGGTGGTGAAAAAGGACATGAAGCTGTGAAGTTTTTCTTTTTGGCAGTTGTACAGGGTTTGTGATGATGATGCATGCTGTGCTGCGCGCTGGCTGGCTACATAAAGTTGGTTAAGTTCACCTTGCTAATACGTCCTGTATGGAACGGGCTAAATAGTGTATGCATGGTAAAAGCTACTAGCATTGGCCGCATCGTACATCAAC]
[+] EMBL OSR04181A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACGAGTTGGATACACTCAGTGCTGTCCATCTACTTCCTCTCAAAGGGAAGAAGCCAATCACGTATACCTTGAGTGCTTCAGACATTGAAACCATGAAGGAGAAGTTTGGGAAGCTACTGCTTGGTGNTGATGCTTCAGGAGGAGCTAGAGGTGTTTGTGCTGCTCTGGCTTTGTCCAATGCCATTATTAATCTCTCAGCCACTATATTTGGAGAACTCTGGAAGCTGGAACCACTCTGTGAAGAGAAAAAAGTCAGGTGGCGGAAGGAAATGGACTGGTTGCTTTCTACTACAACCTACATGGTTGAGCTGGTTCCTACAAAAACAAAATGGAGCAGACGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK060937             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTGCTGGACTCGATGGTAGACACAGAGTATTGGTATGTGGAGAGTGGTAGCCGAGCTAATGGCCGGGGCAAAAAGAATGGTCTGAGGCAGACGAAGAAGTGGTGGCTCCCATCACCTCGTGTGCCAGATATAGGGTTGTCTCAATTTCAGAGAAATAGGCTTGTTTTTCAGGCTAAGCTGGTTCATCAAATCCTCAAAGCTGCGATGTCAATCAATGAAGAAGTCCTGCTTCAGATACCTATTCCTCCAGCTGTCACGGATGCTCTTCCTAAGTCTGGCAGAGCTGGCTTGGGTGAAGACTTGTACCATGCTATAACCACAGAGTACATTCCCATAGAGGAAATTTTCCTCTCTCTTAGTTTAAAAACGGAGCATACCGTGCTCGAGACTATGAACCGGTTGGAGGGTGCAGTTTTTGCATGGAATCAAAGGATCTCAGAGGAAAAGAGCAAGAAATCCCCAGGAAGGCATTCCTGGAATTTCATGAAGGATAGTTCATCAGAACTCGATAAGATGTCCATGTGCATAGAAAGGGTTGAAACACTTATGCAGCTTCTGAAATCCAGATTCCCGAGCCTTCCTCCAACTTTTATAGAAGTTGTAAAGATCCAATACAATGTGGACGTGGGGCATGCCATTGTGGAGGCCTACTCAAGGGTTCTTGTTGGGGTGGCATTCAGCATACTGTCCAGGGTAGCAGAGATTCTGCTGGAAGATGACCTGATCAAGAAGCCCAACACCCCTCTGGCCACACTCAAGTTCGACCTCTCCTCCGACGTGTACCTCGCCGGCATCACCGAGACGCCGCCGGGCCACATCCGGCGGTCGCTGATGGACCAGATCAGCCTGGTCGACGGCAGCCTCGACGCGGTCGTCAGGAAGAAGGGGGTGAAGCAGCTTAGGTGGTGAAAAAGGACATGAAGCTGTGAAGTTTTTCTTTTTGGCAGTTGTACAGGGTTTGTGATGATGATGCATGCTGTGCTGCGCGCTGGCTGGCTACATAAAGTTGGTTAAGTTCACCTTGCTAATACGTCCTGTATGGAACGGGCTAAATAGTGTATGCATGGTAAAAGCTACTAGCATTG                  ]


>consensus_8291#1 GCAGTGCCTCTGAGGTCTCTCTCTCTCTCTCACACACACACACGTCCTCTGGTCACCGAC GCTCCTCCTACTACTAGTACAGTGTGATCGAGCCCCTCCTCACTTACCTTCGCCGAAGAT CCATGGCGGAGGACTAAGCTCCGGCTGCTGATTTCTTCGCTTTGGACGCCCGCAAAAGTT ACTGCTGCTACTGCCGGTACCGGCTGCCGAGGAGGGGAATGAGGATGAAGACGCTGGCGT GCTGCCGGCGGCGGCCGCAGGACTTCAGCATCGACATGGACCAGGAGCCTGACAGGGTGA TGACGTACAATGGCCTTGAGAGCTGTATTATCAACAGTTCCTCTTATGACGATGATAGTG GCCTTAGTGCAACAACGGGAGCAGATGGGTGTGTAACCACTGATTCCGTTGATGATGAAG TCTCAAGTTGCTCCTCAAGTAAAGATGTTTCTAGCTCTTCGTTCTCTTCACAATGCCATC CACTGAGAAAGCAAGAGGAGCATTCACTTTACGAGTTGGATACACTCAGTGCTGTCCATC TACTTCCTCTCAAAGGGAAGAAGCCAATCACGTATACCTTGAGTGCTTCAGACATTGAAA CCATGAAGGAGAAGTTTGGGAAGCTACTGCTTGGTGATGATGCTTCAGGAGGAGCTAGAG GTGTTTGTGCTGCTCTGGCTTTGTCCAATGCCATTATTAATCTCTCAGCCACTATATTTG GAGAACTCTGGAAGCTGGAACCACTCTGTGAAGAGAAAAAAGTCAGGTGGCGGAAGGAAA TGGACTGGTTGCTTTCTCCTACAACCTACATGGTTGAGCTGGTTCCTACAAAACAAAATG GAGCAGACGGGTGCACGTTTGAGATTATGACCCCGAAAGCACGTTCAGATGTTAATGTGA ACCTTCCTGCCCTTCAGAAGCTTGATTCCATGCTAATTGAAGTGCTGGACTCGATGGTAG ACACAGAGTATTGGTATGTGGAGAGTGGTAGCCGAGCTAATGGCCGGGGCAAAAAGAATG GTCTGAGGCAGACGAAGAAGTGGTGGCTCCCATCACCTCGTGTGCCAGATATAGGGTTGT CTCAATTTCAGAGAAATAGGCTTGTTTTTCAGGCTAAGCTGGTTCATCAAATCCTCAAAG CTGCGATGTCAATCAATGAAGAAGTCCTGCTTCAGATACCTATTCCTCCAGCTGTCACGG ATGCTCTTCCTAAGTCTGGCAGAGCTGGCTTGGGTGAAGACTTGTACCATGCTATAACCA CAGAGTACATTCCCATAGAGGAAATTTTCCTCTCTCTTAGTTTAAAAACGGAGCATACCG TGCTCGAGACTATGAACCGGTTGGAGGGTGCAGTTTTTGCATGGAATCAAAGGATCTCAG AGGAAAAGAGCAAGAAATCCCCAGGAAGGCATTCCTGGAATTTCATGAAGGATAGTTCAT CAGAACTCGATAAGATGTCCATGTGCATAGAAAGGGTTGAAACACTTATGCAGCTTCTGA AATCCAGATTCCCGAGCCTTCCTCCAACTTTTATAGAAGTTGTAAAGATCCAATACAATG TGGACGTGGGGCATGCCATTGTGGAGGCCTACTCAAGGGTTCTTGTTGGGGTGGCATTCA GCATACTGTCCAGGGTAGCAGAGATTCTGCTGGAAGATGACCTGATCAAGAAGCCCAACA CCCCTCTGGCCACACTCAAGTTCGACCTCTCCTCCGACGTGTACCTCGCCGGCATCACCG AGACGCCGCCGGGCCACATCCGGCGGTCGCTGATGGACCAGATCAGCCTGGTCGACGGCA GCCTCGACGCGGTCGTCAGGAAGAAGGGGGTGAAGCAGCTTAGGTGGTGAAAAAGGACAT GAAGCTGTGAAGTTTTTCTTTTTGGCAGTTGTACAGGGTTTGTGATGATGATGCATGCTG TGCTGCGCGCTGGCTGGCTACATAAAGTTGGTTAAGTTCACCTTGCTAATACGTCCTGTA TGGAACGGGCTAAATAGTGTATGCATGGTAAAAGCTACTAGCATTGGCCGCATCGTACAT CAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8291#0      CCGACCCAAATCTAATCTAAACCCGTCCCCGTGGATTACGCATCATTACCCCGCATCTGC 60
consensus_8291#1      ------------------------------------------------------------
                                                                                  

consensus_8291#0      TCGTGGATTTTATTAGCTTCTCCTCTCGCTACGTTTGGGGTTTGGTTTTTGATGGGCTAA 120
consensus_8291#1      ------------------------------------------------------------
                                                                                  

consensus_8291#0      TTATTAGCGGTGGTGGAACCTGAAAAGTCGCGTGTTTTGTGCTTTGCGTTTTGCTCGCTT 180
consensus_8291#1      ------------------------------------------------------------
                                                                                  

consensus_8291#0      GCCGTGTGTAGCGGTGGACTGGTGGCGTCGTTCGTGTCGCGCACCTTTTCTCTTTTTTTT 240
consensus_8291#1      ------------------------------------------------------------
                                                                                  

consensus_8291#0      TCTTCACCGGGACCAACTGGGGAAGAAAGATTTGGGGGGTTTTTGGCCGTTTCGGCGTCT 300
consensus_8291#1      ------------------------------------------GCAGTGCCTCTGAGGTCT 18
                                                                   *    *  *  ****

consensus_8291#0      CATCTTTCTTCTCGCCGCGCGCGCTCGTG-TCCAGTCGCCGCCG-TAGTTGTACGAGCGC 358
consensus_8291#1      C-TCTCTCTCTCTCACACACACACACGTCCTCTGGTCACCGACGCTCCTCCTACTACTAG 77
                      * *** ***      * * * * * ***  **  *** *** ** *  *  *** *    

consensus_8291#0      TATCCTTGAGCTTTGGCTGCACGGGATTCA---TTGCAAGGGATGCGGTGGCCAGCGTCG 415
consensus_8291#1      TA-CAGTGTGATCGAGCCCCTCCTCACTTACCTTCGCCGAAGATCCA-TGGCGGAGGACT 135
                      ** *  ** * *   **  * *   * * *   * **    *** *  ****    * * 

consensus_8291#0      TAACTTGCTCGTTTCAGATCGTGACGCTGTGGGGTTCTCTTTTTCAGTTACTGCTGCTAC 475
consensus_8291#1      AAGCT--CCGGCTGCTGATTTCTTCGCTTTGGA--CGCCCGCAAAAGTTACTGCTGCTAC 191
                       * **  *  * * * ***     **** ***      *      ***************

consensus_8291#0      TGCCGGTACCGGCTGCCGAGGAGGGGAATGAGGATGAAGACGCTGGCGTGCTGCCGGCGG 535
consensus_8291#1      TGCCGGTACCGGCTGCCGAGGAGGGGAATGAGGATGAAGACGCTGGCGTGCTGCCGGCGG 251
                      ************************************************************

consensus_8291#0      CGGCCGCAGGACTTCAGCATCGACATGGACCAGGAGCCTGACAGGGTGATGACGTACAAT 595
consensus_8291#1      CGGCCGCAGGACTTCAGCATCGACATGGACCAGGAGCCTGACAGGGTGATGACGTACAAT 311
                      ************************************************************

consensus_8291#0      GGCCTTGAGAGCTGTATTATCAACAGTTCCTCTTATGACGATGATAGTGGCCTTAGTGCA 655
consensus_8291#1      GGCCTTGAGAGCTGTATTATCAACAGTTCCTCTTATGACGATGATAGTGGCCTTAGTGCA 371
                      ************************************************************

consensus_8291#0      ACAACGGGAGCAGATGGGTGTGTAACCACTGATTCCGTTGATGATGAAGTCTCAAGTTGC 715
consensus_8291#1      ACAACGGGAGCAGATGGGTGTGTAACCACTGATTCCGTTGATGATGAAGTCTCAAGTTGC 431
                      ************************************************************

consensus_8291#0      TCCTCAAGTAAAGATGTTTCTAGCTCTTCGTTCTCTTCACAATGCCATCCACTGAGAAAG 775
consensus_8291#1      TCCTCAAGTAAAGATGTTTCTAGCTCTTCGTTCTCTTCACAATGCCATCCACTGAGAAAG 491
                      ************************************************************

consensus_8291#0      CAAGAGGAGCATTCACTTTACGAGTTGGATACACTCAGTGCTGTCCATCTACTTCCTCTC 835
consensus_8291#1      CAAGAGGAGCATTCACTTTACGAGTTGGATACACTCAGTGCTGTCCATCTACTTCCTCTC 551
                      ************************************************************

consensus_8291#0      AAAGGGAAGAAGCCAATCACGTATACCTTGAGTGCTTCAGACATTGAAACCATGAAGGAG 895
consensus_8291#1      AAAGGGAAGAAGCCAATCACGTATACCTTGAGTGCTTCAGACATTGAAACCATGAAGGAG 611
                      ************************************************************

consensus_8291#0      AAGTTTGGGAAGCTACTGCTTGGTGATGATGCTTCAGGAGGAGCTAGAGGTGTTTGTGCT 955
consensus_8291#1      AAGTTTGGGAAGCTACTGCTTGGTGATGATGCTTCAGGAGGAGCTAGAGGTGTTTGTGCT 671
                      ************************************************************

consensus_8291#0      GCTCTGGCTTTGTCCAATGCCATTATTAATCTCTCAGCCACTATATTTGGAGAACTCTGG 1015
consensus_8291#1      GCTCTGGCTTTGTCCAATGCCATTATTAATCTCTCAGCCACTATATTTGGAGAACTCTGG 731
                      ************************************************************

consensus_8291#0      AAGCTGGAACCACTCTGTGAAGAGAAAAAAGTCAGGTGGCGGAAGGAAATGGACTGGTTG 1075
consensus_8291#1      AAGCTGGAACCACTCTGTGAAGAGAAAAAAGTCAGGTGGCGGAAGGAAATGGACTGGTTG 791
                      ************************************************************

consensus_8291#0      CTTTCTCCTACAACCTACATGGTTGAGCTGGTTCCTACAAAACAAAATGGAGCAGACGGG 1135
consensus_8291#1      CTTTCTCCTACAACCTACATGGTTGAGCTGGTTCCTACAAAACAAAATGGAGCAGACGGG 851
                      ************************************************************

consensus_8291#0      TGCACGTTTGAGATTATGACCCCGAAAGCACGTTCAGATGTTAATGTGAACCTTCCTGCC 1195
consensus_8291#1      TGCACGTTTGAGATTATGACCCCGAAAGCACGTTCAGATGTTAATGTGAACCTTCCTGCC 911
                      ************************************************************

consensus_8291#0      CTTCAGAAGCTTGATTCCATGCTAATTGAAGTGCTGGACTCGATGGTAGACACAGAGTAT 1255
consensus_8291#1      CTTCAGAAGCTTGATTCCATGCTAATTGAAGTGCTGGACTCGATGGTAGACACAGAGTAT 971
                      ************************************************************

consensus_8291#0      TGGTATGTGGAGAGTGGTAGCCGAGCTAATGGCCGGGGCAAAAAGAATGGTCTGAGGCAG 1315
consensus_8291#1      TGGTATGTGGAGAGTGGTAGCCGAGCTAATGGCCGGGGCAAAAAGAATGGTCTGAGGCAG 1031
                      ************************************************************

consensus_8291#0      ACGAAGAAGTGGTGGCTCCCATCACCTCGTGTGCCAGATATAGGGTTGTCTCAATTTCAG 1375
consensus_8291#1      ACGAAGAAGTGGTGGCTCCCATCACCTCGTGTGCCAGATATAGGGTTGTCTCAATTTCAG 1091
                      ************************************************************

consensus_8291#0      AGAAATAGGCTTGTTTTTCAGGCTAAGCTGGTTCATCAAATCCTCAAAGCTGCGATGTCA 1435
consensus_8291#1      AGAAATAGGCTTGTTTTTCAGGCTAAGCTGGTTCATCAAATCCTCAAAGCTGCGATGTCA 1151
                      ************************************************************

consensus_8291#0      ATCAATGAAGAAGTCCTGCTTCAGATACCTATTCCTCCAGCTGTCACGGATGCTCTTCCT 1495
consensus_8291#1      ATCAATGAAGAAGTCCTGCTTCAGATACCTATTCCTCCAGCTGTCACGGATGCTCTTCCT 1211
                      ************************************************************

consensus_8291#0      AAGTCTGGCAGAGCTGGCTTGGGTGAAGACTTGTACCATGCTATAACCACAGAGTACATT 1555
consensus_8291#1      AAGTCTGGCAGAGCTGGCTTGGGTGAAGACTTGTACCATGCTATAACCACAGAGTACATT 1271
                      ************************************************************

consensus_8291#0      CCCATAGAGGAAATTTTCCTCTCTCTTAGTTTAAAAACGGAGCATACCGTGCTCGAGACT 1615
consensus_8291#1      CCCATAGAGGAAATTTTCCTCTCTCTTAGTTTAAAAACGGAGCATACCGTGCTCGAGACT 1331
                      ************************************************************

consensus_8291#0      ATGAACCGGTTGGAGGGTGCAGTTTTTGCATGGAATCAAAGGATCTCAGAGGAAAAGAGC 1675
consensus_8291#1      ATGAACCGGTTGGAGGGTGCAGTTTTTGCATGGAATCAAAGGATCTCAGAGGAAAAGAGC 1391
                      ************************************************************

consensus_8291#0      AAGAAATCCCCAGGAAGGCATTCCTGGAATTTCATGAAGGATAGTTCATCAGAACTCGAT 1735
consensus_8291#1      AAGAAATCCCCAGGAAGGCATTCCTGGAATTTCATGAAGGATAGTTCATCAGAACTCGAT 1451
                      ************************************************************

consensus_8291#0      AAGATGTCCATGTGCATAGAAAGGGTTGAAACACTTATGCAGCTTCTGAAATCCAGATTC 1795
consensus_8291#1      AAGATGTCCATGTGCATAGAAAGGGTTGAAACACTTATGCAGCTTCTGAAATCCAGATTC 1511
                      ************************************************************

consensus_8291#0      CCGAGCCTTCCTCCAACTTTTATAGAAGTTGTAAAGATCCAATACAATGTGGACGTGGGG 1855
consensus_8291#1      CCGAGCCTTCCTCCAACTTTTATAGAAGTTGTAAAGATCCAATACAATGTGGACGTGGGG 1571
                      ************************************************************

consensus_8291#0      CATGCCATTGTGGAGGCCTACTCAAGGGTTCTTGTTGGGGTGGCATTCAGCATACTGTCC 1915
consensus_8291#1      CATGCCATTGTGGAGGCCTACTCAAGGGTTCTTGTTGGGGTGGCATTCAGCATACTGTCC 1631
                      ************************************************************

consensus_8291#0      AGGGTAGCAGAGATTCTGCTGGAAGATGACCTGATCAAGAAGCCCAACACCCCTCTGGCC 1975
consensus_8291#1      AGGGTAGCAGAGATTCTGCTGGAAGATGACCTGATCAAGAAGCCCAACACCCCTCTGGCC 1691
                      ************************************************************

consensus_8291#0      ACACTCAAGTTCGACCTCTCCTCCGACGTGTACCTCGCCGGCATCACCGAGACGCCGCCG 2035
consensus_8291#1      ACACTCAAGTTCGACCTCTCCTCCGACGTGTACCTCGCCGGCATCACCGAGACGCCGCCG 1751
                      ************************************************************

consensus_8291#0      GGCCACATCCGGCGGTCGCTGATGGACCAGATCAGCCTGGTCGACGGCAGCCTCGACGCG 2095
consensus_8291#1      GGCCACATCCGGCGGTCGCTGATGGACCAGATCAGCCTGGTCGACGGCAGCCTCGACGCG 1811
                      ************************************************************

consensus_8291#0      GTCGTCAGGAAGAAGGGGGTGAAGCAGCTTAGGTGGTGAAAAAGGACATGAAGCTGTGAA 2155
consensus_8291#1      GTCGTCAGGAAGAAGGGGGTGAAGCAGCTTAGGTGGTGAAAAAGGACATGAAGCTGTGAA 1871
                      ************************************************************

consensus_8291#0      GTTTTTCTTTTTGGCAGTTGTACAGGGTTTGTGATGATGATGCATGCTGTGCTGCGCGCT 2215
consensus_8291#1      GTTTTTCTTTTTGGCAGTTGTACAGGGTTTGTGATGATGATGCATGCTGTGCTGCGCGCT 1931
                      ************************************************************

consensus_8291#0      GGCTGGCTACATAAAGTTGGTTAAGTTCACCTTGCTAATACGTCCTGTATGGAACGGGCT 2275
consensus_8291#1      GGCTGGCTACATAAAGTTGGTTAAGTTCACCTTGCTAATACGTCCTGTATGGAACGGGCT 1991
                      ************************************************************

consensus_8291#0      AAATAGTGTATGCATGGTAAAAGCTNCTAGCATTGGCNGCAAAAAAAAAAAANAA 2330
consensus_8291#1      AAATAGTGTATGCATGGTAAAAGCTACTAGCATTGGCCGCATCGTACATCAAC-- 2044
                      ************************* *********** ***    * *  **   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)