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Oryza sativa
cluster # 8300 cluster # 8300       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8300#0 length = 2210 sequences # 4  
consensus_8300#1 length = 1817 sequences # 1  

consensusID : consensus_8300#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2210
fasta sequence
                              [GTTGAGCTCATCATCTCCTCCATCCTGAGGCGGCGGCGCAACGACGACGACGACGACGATGGCGCTGCTCCGCGCGCACCACCTCCTCCTGATGAGGCCGCGCGCCGCCTTCTCCTCTCGCCCTCCCCCTCTCTCATCCTCCCCGTGCCGCCGCGCCCTTCCCACCACCGCCATCGCCTCGCGCCTCCTCTGCTCCCACCACGCCTCGTCGCCGCCAGAAGATGCCTCCGCCTCCGCCTCGCCCTCTATCGTCGCCGACCTGCTCGACTACCTCAACGAGTCATGGACGCAGTTCCACGCCACCGCGGAGGCGAAGAGGCAGCTGCTTGATGCGGGCTTCACGCTGCTCAGTGAGAACGACGACTGGGACCTGCAGCCTGGTGGCCGCTACTTCTTCACGCGCAACATGTCCTGCTTGATTGCCTTTGCAGTAGGGGAAAAGTACAAATTGGGAAATGGGTTCAATATAATTGCGGCTCACACCGATAGCCCATGTCTCAAGCTGAAACCAAGGTCTGCCTCCTTTAAATCTGGGCATCAAATGGTAAATGTACAGACATACGGAGGTGGGCTGTGGCATACATGGTTTGACAGGGACCTGACTTTGGCTGGGAGAGTTATCCTCAAGGATGCTGATGGCTCATTTAAGCATGAGCTTGTCAAAGTGAGCAGACCATTGATACGTGTACCAACGCTGGCTATACATCTTGACGGGTTATTTCTCATTCCTTCTTTTACTGATCTATTTTCTGAGAACTAGGTGGAATCTATCTGGTAGTATGTTCTGTATTGCTAAGCAAATATTGCTAGATGTTCTCTCTTTCAGTACTGCATCATCATGTAACCCTGTCAAGTTATAGCAGCTTAGTCTTCTTTGAACTACTATTTATATCTATCTCAGTGTTTGGAAGTTATCTCTGAACACTATTGTCATGTTCGTTTAGTGCATATCTGAGGATCACACAGGCTACTGCTGCTATCATATTTGACTGCCTGTTTTAAGTTTGACTTTCTCTATTTAGCTGACTGAATTCCTTTTGCCTTTTAGCACAGTGAATTCTGATGGGTTCAAGCCTAATCTGGAGAATCATCTAGTTCCACTTCTTGCAACAAAACATGAAGAGACTACTGCAAATTCCAGTGAAAAAAATAGTTCAAGTTCCACTAAAGTTGTCCATCATCCACTGCTCTTGCAAGTTCTTTCAGATGAAATTGGTTGCAAATCAGGTGAAATAATTGGCATAGAGTTGAATGTGTGTGATACCCAACCTAGCTGCCTTGGAGGGGGAAATAATGAGTTCATTTATTCTGGTAGACTCGATAATCTCGCTTCGTGTTATTGTGCTCTTAGATCTCTCATGGACTCCTCCAAGATGCCAGAAGAATTGTCAAATGAGAAGGCTATAAGAATGATTGCTTTATTTGATAATGAAGAGGTGGGTTCGAATTCGATGCAAGGGGCGGGTGCACCAACCATGTTCCATGCTATGAGACGGATTGTCGATTCCCTGATGCATCAATCTATGGGAGAGGGTGCTTTGGAACGTGCAATAAATTCCTCTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGACAAGCATGAAGAGCACCACAGACCAGAGCTACAGAAAGGACTAGTTATCAAGCACAATGCTAACCAACGTTATGCTACTAGTGCTGTGACAGCTTTTCTGTTCAAAGAAATAGCAAGACTTCATAATCTTCCTGTTCAGGAATTTGTTGTAAGGAATGATAT-GGGCTGTGGTTCAACTATTGGCCCCATACTTGCTTCTGGTGTTGGCATA-CGGACTGTTGACTGTGGTATTCCTCAGCTCTCAATGCACAGCGTGCGAGAAATGTGTGGCAAAGAAGACGTAGATACAACATACAAGCACTTCAAAGCTTTCTTCGAGATGTTCTCTGATATTGACCGGAAACTCAACGTAGACTAACTTTTAGATCTTATCAGTTCCTCATGTTCAGTATTTGAATTTTTTTTTCCTGGATCAGAATAATGACCGTATATCAGAGTATCAGTTTTTTCTTGTCCCAACATCCCAATCTAATTCTACGCATGACCAAGAGGGGTGAAATCATTTTACATGTAAATATGGTGACACATCGCCAAGCTCACTTTTGAGAAGATGGCCTTACACATATCATACTCAGTTACTCAGGCCTGAATGGCAAGT]

[+] EMBL AK072684             [GTTGAGCTCATCATCTCCTCCATCCTGAGGCGGCGGCGCAACGACGACGACGACGACGATGGCGCTGCTCCGCGCGCACCACCTCCTCCTGATGAGGCCGCGCGCCGCCTTCTCCTCTCGCCCTCCCCCTCTCTCATCCTCCCCGTGCCGCCGCGCCCTTCCCACCACCGCCATCGCCTCGCGCCTCCTCTGCTCCCACCACGCCTCGTCGCCGCCAGAAGATGCCTCCGCCTCCGCCTCGCCCTCTATCGTCGCCGACCTGCTCGACTACCTCAACGAGTCATGGACGCAGTTCCACGCCACCGCGGAGGCGAAGAGGCAGCTGCTTGATGCGGGCTTCACGCTGCTCAGTGAGAACGACGACTGGGACCTGCAGCCTGGTGGCCGCTACTTCTTCACGCGCAACATGTCCTGCTTGATTGCCTTTGCAGTAGGGGAAAAGTACAAATTGGGAAATGGGTTCAATATAATTGCGGCTCACACCGATAGCCCATGTCTCAAGCTGAAACCAAGGTCTGCCTCCTTTAAATCTGGGCATCAAATGGTAAATGTACAGACATACGGAGGTGGGCTGTGGCATACATGGTTTGACAGGGACCTGACTTTGGCTGGGAGAGTTATCCTCAAGGATGCTGATGGCTCATTTAAGCATGAGCTTGTCAAAGTGAGCAGACCATTGATACGTGTACCAACGCTGGCTATACATCTTGACGGGTTATTTCTCATTCCTTCTTTTACTGATCTATTTTCTGAGAACTAGGTGGAATCTATCTGGTAGTATGTTCTGTATTGCTAAGCAAATATTGCTAGATGTTCTCTCTTTCAGTACTGCATCATCATGTAACCCTGTCAAGTTATAGCAGCTTAGTCTTCTTTGAACTACTATTTATATCTATCTCAGTGTTTGGAAGTTATCTCTGAACACTATTGTCATGTTCGTTTAGTGCATATCTGAGGATCACACAGGCTACTGCTGCTATCATATTTGACTGCCTGTTTTAAGTTTGACTTTCTCTATTTAGCTGACTGAATTCCTTTTGCCTTTTAGCACAGTGAATTCTGATGGGTTCAAGCCTAATCTGGAGAATCATCTAGTTCCACTTCTTGCAACAAAACATGAAGAGACTACTGCAAATTCCAGTGAAAAAAATAGTTCAAGTTCCACTAAAGTTGTCCATCATCCACTGCTCTTGCAAGTTCTTTCAGATGAAATTGGTTGCAAATCAGGTGAAATAATTGGCATAGAGTTGAATGTGTGTGATACCCAACCTAGCTGCCTTGGAGGGGGAAATAATGAGTTCATTTATTCTGGTAGACTCGATAATCTCGCTTCGTGTTATTGTGCTCTTAGATCTCTCATGGACTCCTCCAAGATGCCAGAAGAATTGTCAAATGAGAAGGCTATAAGAATGATTGCTTTATTTGATAATGAAGAGGTGGGTTCGAATTCGATGCAAGGGGCGGGTGCACCAACCATGTTCCATGCTATGAGACGGATTGTCGATTCCCTGATGCATCAATCTATGGGAGAGGGTGCTTTGGAACGTGCAATAAATTCCTCTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGACAAGCATGAAGAGCACCACAGACCAGAGCTACAGAAAGGACTAGTTATCAAGCACAATGCTAACCAACGTTATGCTACTAGTGCTGTGACAGCTTTTCTGTTCAAAGAAATAGCAAGACTTCATAATCTTCCTGTTCAGGAATTTGTTGTAAGGAATGATAT GGGCTGTGGTTCAACTATTGGCCCCATACTTGCTTCTGGTGTTGGCATA CGGACTGTTGACTGTGGTATTCCTCAGCTCTCAATGCACAGCGTGCGAGAAATGTGTGGCAAAGAAGACGTAGATACAACATACAAGCACTTCAAAGCTTTCTTCGAGATGTTCTCTGATATTGACCGGAAACTCAACGTAGACTAACTTTTAGATCTTATCAGTTCCTCATGTTCAGTATTTGAATTTTTTTTTCCTGGATCAGAATAATGACCGTATATCAGAGTATCAGTTTTTTCTTGTCCCAACATCCCAATCTAATTCTACGCATGACCAAGAGGGGTGAAATCATTTTACATGTAAATATGGTGACACATCGCCAAGCTCACTTTTGAGAAGATGGCCTTACACATATC                               ]
[+] EMBL CA764693             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCCACTAAAGTTGTCCATCATCCACTGCTCTTGCAAGTTCTTTCAGATGAAATTGGTTGCAAATCAGATGAAATAATTGGCATGGAGTTGAATGTGTGTGATACCCAACCTAGCTGCCTTGGAGGGGGAAATAATGAGTTCATTTATTCTGGTAGACTTGATAATCTCGCTTCGTGTTATTGTGCTCTTAGATCTCTCATGGACTCCTCCAAGATGCCAGAAGAATTGTCAAATGAGAAGGCTATAAGAATGATTGCTTTATTTGATAATGAAGAGGTGGGTTCAAATTCGATGCAAGGGGCAGGTGCACCAACCATGTTCCATGCTATGAGACGGATCGTTGATTCCCTGATGCATCAGTCTATGGGAGAGGGTGCTTTGGACCGTGCAATAAATTCTTCTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGACAAGCATGAAGAGCACCACAGACCCGAGCTACAGAAAGGACTAGTTATCAAGCACAATGCCAACCAACGTTACGCTACTAGTGCTGTGACAGCTTTTCTATTCAAAGAAATAGCAAGACATCATAATCTTNCTGNTCANGAATTTGNTGTAAGGAATGATATGGGGTTGGGGNTCAACTATTGGNCCCATACTTGCTTCTGGTGGTGGCATACCGGACTGGTGACTGNGGTATTNCTCAGCTNTCAATGCACAGNGGGCGAGAAATGNGTGGCNAAGAAGACGTAGATACAACATACAGGCNCTTCAAAGCTTTTTTCGAAATGNTCTCTGGCATTGGCCGGNAACTTAACGNANACTAACTTTTAAATCTTAANAGT                                                                                                                                                                                                                              ]
[-] EMBL CB659102             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCTATAAGAATGATTGCTTTATTTGATAATGAAGAGGTGGGTTCGAATTCGATGCAAGGGGCGGGTGCACCAACCATGTTCCATGCTATGAGACGGATTGTCGATTCCCTGATGCATCAATCTATGGGAGAGGGTGCTTTGGAACGTGCAATAAATTCCTCTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGACAAGCATGAAGAGCACCACAGACCAGAGCTACAGAAAGGACTAGTTATCAAGCACAATGCTAACCAACGTTATGCTACTAGTGCTGTGACAGCTTTTCTGTTCAAAGAAATAGCAAGACTTCATAATCTTCCTGTTCAGGAATTTGTTGTAAGGAATGATAT GGGCTGTGGTTCAACTATTGGCCCCATACTTGCTTCTGGTGTTGGCATA CGGACTGTTGACTGTGGTATTCCTCAGCTCTCAATGCACAGCGTGCGAGAAATGTGTGGCAAAGAAGACGTAGATACAACATACAAGCACTTCAAAGCTTTCTTCGAGATGTTCTCTGATATTGACCGGAAACTCAACGTAGACTAACTTTTAGATCTTATCAGTTCCTCATGTTCAGTATTTGAATTTTTTTTTCCTGGATCAGAATAATGACCGTATATCAGAGTATCAGTTTTTTCTTGTCCCAACATCCCAATCTAATTCTACGCATGACCAAGAGGGGTGAAATCATTTTACATGTAAATATGGTGACACATCGCCAAGCTCACTTTTGAGAAGATGGCCTTACACATATCATACTCAGTTACTCAGGCCTGAATGGCAAGT]
[+] EMBL AA754556             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGGATCGTTGATTCCCTGATGCATCAGTCCNTGGGAGAGGGTGCTTTGGACCGTGCAATAAATTCTTCTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGACAAGCATGAAGAGCACCACAGACCCGAGCTACAGAAAGGACTAGTTATCAAGCACAATGCCAACCAACGTTACGCTACTAGTGCTGTGACAGCTTTTCTATTCAAAGAAATAGCAAGACATCATAATCTTCCTGTTCTTNNTTTTNTTGTAAGGAATGATAT GGGTTGTGGTTCAACTATNGGCCCCATACNTGCTTCTGGTGTNGGCNTA CGGACTGTTGACTGTGGTATTCCTCAGCTCTC ATGCACAGCGTGCGAGAAATGTGTGGCANAGAAGACGTAGATACAACATACAGGCACTTCAAAGCTTTCTCCGAGATGTTCT                                                                                                                                                                                                                                                                                ]


>consensus_8300#0 GTTGAGCTCATCATCTCCTCCATCCTGAGGCGGCGGCGCAACGACGACGACGACGACGAT GGCGCTGCTCCGCGCGCACCACCTCCTCCTGATGAGGCCGCGCGCCGCCTTCTCCTCTCG CCCTCCCCCTCTCTCATCCTCCCCGTGCCGCCGCGCCCTTCCCACCACCGCCATCGCCTC GCGCCTCCTCTGCTCCCACCACGCCTCGTCGCCGCCAGAAGATGCCTCCGCCTCCGCCTC GCCCTCTATCGTCGCCGACCTGCTCGACTACCTCAACGAGTCATGGACGCAGTTCCACGC CACCGCGGAGGCGAAGAGGCAGCTGCTTGATGCGGGCTTCACGCTGCTCAGTGAGAACGA CGACTGGGACCTGCAGCCTGGTGGCCGCTACTTCTTCACGCGCAACATGTCCTGCTTGAT TGCCTTTGCAGTAGGGGAAAAGTACAAATTGGGAAATGGGTTCAATATAATTGCGGCTCA CACCGATAGCCCATGTCTCAAGCTGAAACCAAGGTCTGCCTCCTTTAAATCTGGGCATCA AATGGTAAATGTACAGACATACGGAGGTGGGCTGTGGCATACATGGTTTGACAGGGACCT GACTTTGGCTGGGAGAGTTATCCTCAAGGATGCTGATGGCTCATTTAAGCATGAGCTTGT CAAAGTGAGCAGACCATTGATACGTGTACCAACGCTGGCTATACATCTTGACGGGTTATT TCTCATTCCTTCTTTTACTGATCTATTTTCTGAGAACTAGGTGGAATCTATCTGGTAGTA TGTTCTGTATTGCTAAGCAAATATTGCTAGATGTTCTCTCTTTCAGTACTGCATCATCAT GTAACCCTGTCAAGTTATAGCAGCTTAGTCTTCTTTGAACTACTATTTATATCTATCTCA GTGTTTGGAAGTTATCTCTGAACACTATTGTCATGTTCGTTTAGTGCATATCTGAGGATC ACACAGGCTACTGCTGCTATCATATTTGACTGCCTGTTTTAAGTTTGACTTTCTCTATTT AGCTGACTGAATTCCTTTTGCCTTTTAGCACAGTGAATTCTGATGGGTTCAAGCCTAATC TGGAGAATCATCTAGTTCCACTTCTTGCAACAAAACATGAAGAGACTACTGCAAATTCCA GTGAAAAAAATAGTTCAAGTTCCACTAAAGTTGTCCATCATCCACTGCTCTTGCAAGTTC TTTCAGATGAAATTGGTTGCAAATCAGGTGAAATAATTGGCATAGAGTTGAATGTGTGTG ATACCCAACCTAGCTGCCTTGGAGGGGGAAATAATGAGTTCATTTATTCTGGTAGACTCG ATAATCTCGCTTCGTGTTATTGTGCTCTTAGATCTCTCATGGACTCCTCCAAGATGCCAG AAGAATTGTCAAATGAGAAGGCTATAAGAATGATTGCTTTATTTGATAATGAAGAGGTGG GTTCGAATTCGATGCAAGGGGCGGGTGCACCAACCATGTTCCATGCTATGAGACGGATTG TCGATTCCCTGATGCATCAATCTATGGGAGAGGGTGCTTTGGAACGTGCAATAAATTCCT CTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGACAAGCATG AAGAGCACCACAGACCAGAGCTACAGAAAGGACTAGTTATCAAGCACAATGCTAACCAAC GTTATGCTACTAGTGCTGTGACAGCTTTTCTGTTCAAAGAAATAGCAAGACTTCATAATC TTCCTGTTCAGGAATTTGTTGTAAGGAATGATATGGGCTGTGGTTCAACTATTGGCCCCA TACTTGCTTCTGGTGTTGGCATACGGACTGTTGACTGTGGTATTCCTCAGCTCTCAATGC ACAGCGTGCGAGAAATGTGTGGCAAAGAAGACGTAGATACAACATACAAGCACTTCAAAG CTTTCTTCGAGATGTTCTCTGATATTGACCGGAAACTCAACGTAGACTAACTTTTAGATC TTATCAGTTCCTCATGTTCAGTATTTGAATTTTTTTTTCCTGGATCAGAATAATGACCGT ATATCAGAGTATCAGTTTTTTCTTGTCCCAACATCCCAATCTAATTCTACGCATGACCAA GAGGGGTGAAATCATTTTACATGTAAATATGGTGACACATCGCCAAGCTCACTTTTGAGA AGATGGCCTTACACATATCATACTCAGTTACTCAGGCCTGAATGGCAAGT



consensusID : consensus_8300#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1817
fasta sequence
                              [TCCATCCTGAGGCGGCGGCGCAACGACGACGACGACGACGATGGCGCTGCTCCGCGCGCACCACCTCCTCCTGATGAGGCCGCGCGCCGCCTTCTCCTCTCGCCCTCCCCCTCTCTCATCCTCCCCGTGCCGCCGCGCCCTTCCCACCACCGCCATCGCCTCGCGCCTCCTCTGCTCCCACCACGCCTCGTCGCCGCCCGAAGATGCCTCCGCCTCCGCCTCGCCCTCTATCGTCGCCGACCTGCTCGACTACCTCAACGAGTCATGGACGCAGTTCCACGCCACCGCGGAGGCGAAGAGGCAGCTGCTTGATGCGGGCTTCACGCTGCTCAGTGAGAACGACGACTGGGACCTGCAGCCTGGTGGCCGCTACTTCTTCACGCGCAACATGTCCTGCTTGATTGCCTTTGCAGTAGGGGAAAAGTACAAATTGGGAAATGGGTTCAATATAATTGCGGCTCACACCGATAGCCCATGTCTCAAGCTGAAACCAAGGTCTGCCTCCTTTAAATCTGGGCATCAAATGGTAAATGTACAGACATACGGAGGTGGGCTGTGGCATACATGGTTTGACAGGGACCTGACTTTGGCTGGGAGAGTTATCCTCAAGGATGCTGATGGCTCATTTAAGCATGAGCTTGTCAAAGTGAGCAGACCATTGATACGTGTACCAACGCTGGCTATACATCTTGACCGCACAGTGAATTCTGATGGGTTCAAGCCTAATCTGGAGAATCATCTAGTTCCACTTCTTGCAACAAAACATGAAGAGACTACTGCAAATTCCAGTGAAAAAAATAGTTCAAGTTCCACTAAAGTTGTCCATCATCCACTGCTCTTGCAAGTTCTTTCAGATGAAATTGGTTGCAAATCAGGTGAAATAATTGGCATAGAGTTGAATGTGTGTGATACCCAACCTAGCTGCCTTGGAGGGGGAAATAATGAGTTCATTTATTCTGGTAGACTCGATAATCTCGCTTCGTGTTATTGTGCTCTTAGATCTCTCATGGACTCCTCCAAGATGCCAGAAGAATTGTCAAATGAGAAGGCTATAAGAATGATTGCTTTATTTGATAATGAAGAGGTGGGTTCGAATTCGATGCAAGGGGCGGGTGCACCAACCATGTTCCATGCTATGAGACGGATTGTCGATTCCCTGATGCATCAATCTATGGGAGAGGGTGCTTTGGAACGTGCAATAAATTCCTCTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGACAAGCATGAAGAGCACCACAGACCAGAGCTACAGAAAGGACTAGTTATCAAGCACAATGCTAACCAACGTTATGCTACTAGTGCTGTGACAGCTTTTCTGTTCAAAGAAATAGCAAGACTTCATAATCTTCCTGTTCAGGAATTTGTTGTAAGGAATGATATGGGCTGTGGTTCAACTATTGGCCCCATACTTGCTTCTGGTGTTGGCATACGGACTGTTGACTGTGGTATTCCTCAGCTCTCAATGCACAGCGTGCGAGAAATGTGTGGCAAAGAAGACGTAGATACAACATACAAGCACTTCAAAGCTCTCTTCGAGATGTTCTCTGATATTGACCGGAAACTCAACGTAGACTAACTTTTAGATCTTATCAGTTCCTCATGTTCAGTATTTGAATTTTTTTTTCCTGGATCAGAATAATGACCGTATATCAGAGTATCAGTTTTTTCTTGTCCCAACATCCCAATCTAATTCTACGCATGACCAAGAGGGGTGAAATCATTTTACATGTAAATATGGTGACACATCGCCAAGCTCACTTTTGAGAAGATGGCCT]

[+] EMBL AK058521             [TCCATCCTGAGGCGGCGGCGCAACGACGACGACGACGACGATGGCGCTGCTCCGCGCGCACCACCTCCTCCTGATGAGGCCGCGCGCCGCCTTCTCCTCTCGCCCTCCCCCTCTCTCATCCTCCCCGTGCCGCCGCGCCCTTCCCACCACCGCCATCGCCTCGCGCCTCCTCTGCTCCCACCACGCCTCGTCGCCGCCCGAAGATGCCTCCGCCTCCGCCTCGCCCTCTATCGTCGCCGACCTGCTCGACTACCTCAACGAGTCATGGACGCAGTTCCACGCCACCGCGGAGGCGAAGAGGCAGCTGCTTGATGCGGGCTTCACGCTGCTCAGTGAGAACGACGACTGGGACCTGCAGCCTGGTGGCCGCTACTTCTTCACGCGCAACATGTCCTGCTTGATTGCCTTTGCAGTAGGGGAAAAGTACAAATTGGGAAATGGGTTCAATATAATTGCGGCTCACACCGATAGCCCATGTCTCAAGCTGAAACCAAGGTCTGCCTCCTTTAAATCTGGGCATCAAATGGTAAATGTACAGACATACGGAGGTGGGCTGTGGCATACATGGTTTGACAGGGACCTGACTTTGGCTGGGAGAGTTATCCTCAAGGATGCTGATGGCTCATTTAAGCATGAGCTTGTCAAAGTGAGCAGACCATTGATACGTGTACCAACGCTGGCTATACATCTTGACCGCACAGTGAATTCTGATGGGTTCAAGCCTAATCTGGAGAATCATCTAGTTCCACTTCTTGCAACAAAACATGAAGAGACTACTGCAAATTCCAGTGAAAAAAATAGTTCAAGTTCCACTAAAGTTGTCCATCATCCACTGCTCTTGCAAGTTCTTTCAGATGAAATTGGTTGCAAATCAGGTGAAATAATTGGCATAGAGTTGAATGTGTGTGATACCCAACCTAGCTGCCTTGGAGGGGGAAATAATGAGTTCATTTATTCTGGTAGACTCGATAATCTCGCTTCGTGTTATTGTGCTCTTAGATCTCTCATGGACTCCTCCAAGATGCCAGAAGAATTGTCAAATGAGAAGGCTATAAGAATGATTGCTTTATTTGATAATGAAGAGGTGGGTTCGAATTCGATGCAAGGGGCGGGTGCACCAACCATGTTCCATGCTATGAGACGGATTGTCGATTCCCTGATGCATCAATCTATGGGAGAGGGTGCTTTGGAACGTGCAATAAATTCCTCTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGACAAGCATGAAGAGCACCACAGACCAGAGCTACAGAAAGGACTAGTTATCAAGCACAATGCTAACCAACGTTATGCTACTAGTGCTGTGACAGCTTTTCTGTTCAAAGAAATAGCAAGACTTCATAATCTTCCTGTTCAGGAATTTGTTGTAAGGAATGATATGGGCTGTGGTTCAACTATTGGCCCCATACTTGCTTCTGGTGTTGGCATACGGACTGTTGACTGTGGTATTCCTCAGCTCTCAATGCACAGCGTGCGAGAAATGTGTGGCAAAGAAGACGTAGATACAACATACAAGCACTTCAAAGCTCTCTTCGAGATGTTCTCTGATATTGACCGGAAACTCAACGTAGACTAACTTTTAGATCTTATCAGTTCCTCATGTTCAGTATTTGAATTTTTTTTTCCTGGATCAGAATAATGACCGTATATCAGAGTATCAGTTTTTTCTTGTCCCAACATCCCAATCTAATTCTACGCATGACCAAGAGGGGTGAAATCATTTTACATGTAAATATGGTGACACATCGCCAAGCTCACTTTTGAGAAGATGGCCT]


>consensus_8300#1 TCCATCCTGAGGCGGCGGCGCAACGACGACGACGACGACGATGGCGCTGCTCCGCGCGCA CCACCTCCTCCTGATGAGGCCGCGCGCCGCCTTCTCCTCTCGCCCTCCCCCTCTCTCATC CTCCCCGTGCCGCCGCGCCCTTCCCACCACCGCCATCGCCTCGCGCCTCCTCTGCTCCCA CCACGCCTCGTCGCCGCCCGAAGATGCCTCCGCCTCCGCCTCGCCCTCTATCGTCGCCGA CCTGCTCGACTACCTCAACGAGTCATGGACGCAGTTCCACGCCACCGCGGAGGCGAAGAG GCAGCTGCTTGATGCGGGCTTCACGCTGCTCAGTGAGAACGACGACTGGGACCTGCAGCC TGGTGGCCGCTACTTCTTCACGCGCAACATGTCCTGCTTGATTGCCTTTGCAGTAGGGGA AAAGTACAAATTGGGAAATGGGTTCAATATAATTGCGGCTCACACCGATAGCCCATGTCT CAAGCTGAAACCAAGGTCTGCCTCCTTTAAATCTGGGCATCAAATGGTAAATGTACAGAC ATACGGAGGTGGGCTGTGGCATACATGGTTTGACAGGGACCTGACTTTGGCTGGGAGAGT TATCCTCAAGGATGCTGATGGCTCATTTAAGCATGAGCTTGTCAAAGTGAGCAGACCATT GATACGTGTACCAACGCTGGCTATACATCTTGACCGCACAGTGAATTCTGATGGGTTCAA GCCTAATCTGGAGAATCATCTAGTTCCACTTCTTGCAACAAAACATGAAGAGACTACTGC AAATTCCAGTGAAAAAAATAGTTCAAGTTCCACTAAAGTTGTCCATCATCCACTGCTCTT GCAAGTTCTTTCAGATGAAATTGGTTGCAAATCAGGTGAAATAATTGGCATAGAGTTGAA TGTGTGTGATACCCAACCTAGCTGCCTTGGAGGGGGAAATAATGAGTTCATTTATTCTGG TAGACTCGATAATCTCGCTTCGTGTTATTGTGCTCTTAGATCTCTCATGGACTCCTCCAA GATGCCAGAAGAATTGTCAAATGAGAAGGCTATAAGAATGATTGCTTTATTTGATAATGA AGAGGTGGGTTCGAATTCGATGCAAGGGGCGGGTGCACCAACCATGTTCCATGCTATGAG ACGGATTGTCGATTCCCTGATGCATCAATCTATGGGAGAGGGTGCTTTGGAACGTGCAAT AAATTCCTCTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGA CAAGCATGAAGAGCACCACAGACCAGAGCTACAGAAAGGACTAGTTATCAAGCACAATGC TAACCAACGTTATGCTACTAGTGCTGTGACAGCTTTTCTGTTCAAAGAAATAGCAAGACT TCATAATCTTCCTGTTCAGGAATTTGTTGTAAGGAATGATATGGGCTGTGGTTCAACTAT TGGCCCCATACTTGCTTCTGGTGTTGGCATACGGACTGTTGACTGTGGTATTCCTCAGCT CTCAATGCACAGCGTGCGAGAAATGTGTGGCAAAGAAGACGTAGATACAACATACAAGCA CTTCAAAGCTCTCTTCGAGATGTTCTCTGATATTGACCGGAAACTCAACGTAGACTAACT TTTAGATCTTATCAGTTCCTCATGTTCAGTATTTGAATTTTTTTTTCCTGGATCAGAATA ATGACCGTATATCAGAGTATCAGTTTTTTCTTGTCCCAACATCCCAATCTAATTCTACGC ATGACCAAGAGGGGTGAAATCATTTTACATGTAAATATGGTGACACATCGCCAAGCTCAC TTTTGAGAAGATGGCCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8300#0      GTTGAGCTCATCATCTCCTCCATCCTGAGGCGGCGGCGCAACGACGACGACGACGACGAT 60
consensus_8300#1      ------------------TCCATCCTGAGGCGGCGGCGCAACGACGACGACGACGACGAT 42
                                        ******************************************

consensus_8300#0      GGCGCTGCTCCGCGCGCACCACCTCCTCCTGATGAGGCCGCGCGCCGCCTTCTCCTCTCG 120
consensus_8300#1      GGCGCTGCTCCGCGCGCACCACCTCCTCCTGATGAGGCCGCGCGCCGCCTTCTCCTCTCG 102
                      ************************************************************

consensus_8300#0      CCCTCCCCCTCTCTCATCCTCCCCGTGCCGCCGCGCCCTTCCCACCACCGCCATCGCCTC 180
consensus_8300#1      CCCTCCCCCTCTCTCATCCTCCCCGTGCCGCCGCGCCCTTCCCACCACCGCCATCGCCTC 162
                      ************************************************************

consensus_8300#0      GCGCCTCCTCTGCTCCCACCACGCCTCGTCGCCGCCAGAAGATGCCTCCGCCTCCGCCTC 240
consensus_8300#1      GCGCCTCCTCTGCTCCCACCACGCCTCGTCGCCGCCCGAAGATGCCTCCGCCTCCGCCTC 222
                      ************************************ ***********************

consensus_8300#0      GCCCTCTATCGTCGCCGACCTGCTCGACTACCTCAACGAGTCATGGACGCAGTTCCACGC 300
consensus_8300#1      GCCCTCTATCGTCGCCGACCTGCTCGACTACCTCAACGAGTCATGGACGCAGTTCCACGC 282
                      ************************************************************

consensus_8300#0      CACCGCGGAGGCGAAGAGGCAGCTGCTTGATGCGGGCTTCACGCTGCTCAGTGAGAACGA 360
consensus_8300#1      CACCGCGGAGGCGAAGAGGCAGCTGCTTGATGCGGGCTTCACGCTGCTCAGTGAGAACGA 342
                      ************************************************************

consensus_8300#0      CGACTGGGACCTGCAGCCTGGTGGCCGCTACTTCTTCACGCGCAACATGTCCTGCTTGAT 420
consensus_8300#1      CGACTGGGACCTGCAGCCTGGTGGCCGCTACTTCTTCACGCGCAACATGTCCTGCTTGAT 402
                      ************************************************************

consensus_8300#0      TGCCTTTGCAGTAGGGGAAAAGTACAAATTGGGAAATGGGTTCAATATAATTGCGGCTCA 480
consensus_8300#1      TGCCTTTGCAGTAGGGGAAAAGTACAAATTGGGAAATGGGTTCAATATAATTGCGGCTCA 462
                      ************************************************************

consensus_8300#0      CACCGATAGCCCATGTCTCAAGCTGAAACCAAGGTCTGCCTCCTTTAAATCTGGGCATCA 540
consensus_8300#1      CACCGATAGCCCATGTCTCAAGCTGAAACCAAGGTCTGCCTCCTTTAAATCTGGGCATCA 522
                      ************************************************************

consensus_8300#0      AATGGTAAATGTACAGACATACGGAGGTGGGCTGTGGCATACATGGTTTGACAGGGACCT 600
consensus_8300#1      AATGGTAAATGTACAGACATACGGAGGTGGGCTGTGGCATACATGGTTTGACAGGGACCT 582
                      ************************************************************

consensus_8300#0      GACTTTGGCTGGGAGAGTTATCCTCAAGGATGCTGATGGCTCATTTAAGCATGAGCTTGT 660
consensus_8300#1      GACTTTGGCTGGGAGAGTTATCCTCAAGGATGCTGATGGCTCATTTAAGCATGAGCTTGT 642
                      ************************************************************

consensus_8300#0      CAAAGTGAGCAGACCATTGATACGTGTACCAACGCTGGCTATACATCTTGACGGGTTATT 720
consensus_8300#1      CAAAGTGAGCAGACCATTGATACGTGTACCAACGCTGGCTATACATCTTGACCG------ 696
                      **************************************************** *      

consensus_8300#0      TCTCATTCCTTCTTTTACTGATCTATTTTCTGAGAACTAGGTGGAATCTATCTGGTAGTA 780
consensus_8300#1      ------------------------------------------------------------
                                                                                  

consensus_8300#0      TGTTCTGTATTGCTAAGCAAATATTGCTAGATGTTCTCTCTTTCAGTACTGCATCATCAT 840
consensus_8300#1      ------------------------------------------------------------
                                                                                  

consensus_8300#0      GTAACCCTGTCAAGTTATAGCAGCTTAGTCTTCTTTGAACTACTATTTATATCTATCTCA 900
consensus_8300#1      ------------------------------------------------------------
                                                                                  

consensus_8300#0      GTGTTTGGAAGTTATCTCTGAACACTATTGTCATGTTCGTTTAGTGCATATCTGAGGATC 960
consensus_8300#1      ------------------------------------------------------------
                                                                                  

consensus_8300#0      ACACAGGCTACTGCTGCTATCATATTTGACTGCCTGTTTTAAGTTTGACTTTCTCTATTT 1020
consensus_8300#1      ------------------------------------------------------------
                                                                                  

consensus_8300#0      AGCTGACTGAATTCCTTTTGCCTTTTAGCACAGTGAATTCTGATGGGTTCAAGCCTAATC 1080
consensus_8300#1      ----------------------------CACAGTGAATTCTGATGGGTTCAAGCCTAATC 728
                                                  ********************************

consensus_8300#0      TGGAGAATCATCTAGTTCCACTTCTTGCAACAAAACATGAAGAGACTACTGCAAATTCCA 1140
consensus_8300#1      TGGAGAATCATCTAGTTCCACTTCTTGCAACAAAACATGAAGAGACTACTGCAAATTCCA 788
                      ************************************************************

consensus_8300#0      GTGAAAAAAATAGTTCAAGTTCCACTAAAGTTGTCCATCATCCACTGCTCTTGCAAGTTC 1200
consensus_8300#1      GTGAAAAAAATAGTTCAAGTTCCACTAAAGTTGTCCATCATCCACTGCTCTTGCAAGTTC 848
                      ************************************************************

consensus_8300#0      TTTCAGATGAAATTGGTTGCAAATCAGGTGAAATAATTGGCATAGAGTTGAATGTGTGTG 1260
consensus_8300#1      TTTCAGATGAAATTGGTTGCAAATCAGGTGAAATAATTGGCATAGAGTTGAATGTGTGTG 908
                      ************************************************************

consensus_8300#0      ATACCCAACCTAGCTGCCTTGGAGGGGGAAATAATGAGTTCATTTATTCTGGTAGACTCG 1320
consensus_8300#1      ATACCCAACCTAGCTGCCTTGGAGGGGGAAATAATGAGTTCATTTATTCTGGTAGACTCG 968
                      ************************************************************

consensus_8300#0      ATAATCTCGCTTCGTGTTATTGTGCTCTTAGATCTCTCATGGACTCCTCCAAGATGCCAG 1380
consensus_8300#1      ATAATCTCGCTTCGTGTTATTGTGCTCTTAGATCTCTCATGGACTCCTCCAAGATGCCAG 1028
                      ************************************************************

consensus_8300#0      AAGAATTGTCAAATGAGAAGGCTATAAGAATGATTGCTTTATTTGATAATGAAGAGGTGG 1440
consensus_8300#1      AAGAATTGTCAAATGAGAAGGCTATAAGAATGATTGCTTTATTTGATAATGAAGAGGTGG 1088
                      ************************************************************

consensus_8300#0      GTTCGAATTCGATGCAAGGGGCGGGTGCACCAACCATGTTCCATGCTATGAGACGGATTG 1500
consensus_8300#1      GTTCGAATTCGATGCAAGGGGCGGGTGCACCAACCATGTTCCATGCTATGAGACGGATTG 1148
                      ************************************************************

consensus_8300#0      TCGATTCCCTGATGCATCAATCTATGGGAGAGGGTGCTTTGGAACGTGCAATAAATTCCT 1560
consensus_8300#1      TCGATTCCCTGATGCATCAATCTATGGGAGAGGGTGCTTTGGAACGTGCAATAAATTCCT 1208
                      ************************************************************

consensus_8300#0      CTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGACAAGCATG 1620
consensus_8300#1      CTTTCCTTGTTTCGGCAGACATGGCTCATGCCCTGCACCCAAATTATCCAGACAAGCATG 1268
                      ************************************************************

consensus_8300#0      AAGAGCACCACAGACCAGAGCTACAGAAAGGACTAGTTATCAAGCACAATGCTAACCAAC 1680
consensus_8300#1      AAGAGCACCACAGACCAGAGCTACAGAAAGGACTAGTTATCAAGCACAATGCTAACCAAC 1328
                      ************************************************************

consensus_8300#0      GTTATGCTACTAGTGCTGTGACAGCTTTTCTGTTCAAAGAAATAGCAAGACTTCATAATC 1740
consensus_8300#1      GTTATGCTACTAGTGCTGTGACAGCTTTTCTGTTCAAAGAAATAGCAAGACTTCATAATC 1388
                      ************************************************************

consensus_8300#0      TTCCTGTTCAGGAATTTGTTGTAAGGAATGATATGGGCTGTGGTTCAACTATTGGCCCCA 1800
consensus_8300#1      TTCCTGTTCAGGAATTTGTTGTAAGGAATGATATGGGCTGTGGTTCAACTATTGGCCCCA 1448
                      ************************************************************

consensus_8300#0      TACTTGCTTCTGGTGTTGGCATACGGACTGTTGACTGTGGTATTCCTCAGCTCTCAATGC 1860
consensus_8300#1      TACTTGCTTCTGGTGTTGGCATACGGACTGTTGACTGTGGTATTCCTCAGCTCTCAATGC 1508
                      ************************************************************

consensus_8300#0      ACAGCGTGCGAGAAATGTGTGGCAAAGAAGACGTAGATACAACATACAAGCACTTCAAAG 1920
consensus_8300#1      ACAGCGTGCGAGAAATGTGTGGCAAAGAAGACGTAGATACAACATACAAGCACTTCAAAG 1568
                      ************************************************************

consensus_8300#0      CTTTCTTCGAGATGTTCTCTGATATTGACCGGAAACTCAACGTAGACTAACTTTTAGATC 1980
consensus_8300#1      CTCTCTTCGAGATGTTCTCTGATATTGACCGGAAACTCAACGTAGACTAACTTTTAGATC 1628
                      ** *********************************************************

consensus_8300#0      TTATCAGTTCCTCATGTTCAGTATTTGAATTTTTTTTTCCTGGATCAGAATAATGACCGT 2040
consensus_8300#1      TTATCAGTTCCTCATGTTCAGTATTTGAATTTTTTTTTCCTGGATCAGAATAATGACCGT 1688
                      ************************************************************

consensus_8300#0      ATATCAGAGTATCAGTTTTTTCTTGTCCCAACATCCCAATCTAATTCTACGCATGACCAA 2100
consensus_8300#1      ATATCAGAGTATCAGTTTTTTCTTGTCCCAACATCCCAATCTAATTCTACGCATGACCAA 1748
                      ************************************************************

consensus_8300#0      GAGGGGTGAAATCATTTTACATGTAAATATGGTGACACATCGCCAAGCTCACTTTTGAGA 2160
consensus_8300#1      GAGGGGTGAAATCATTTTACATGTAAATATGGTGACACATCGCCAAGCTCACTTTTGAGA 1808
                      ************************************************************

consensus_8300#0      AGATGGCCTTACACATATCATACTCAGTTACTCAGGCCTGAATGGCAAGT 2210
consensus_8300#1      AGATGGCCT----------------------------------------- 1817
                      *********                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)