These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8316#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1571 fasta sequence [GAAAACCACAAGAGACCNTAAAAAACTTCCTCTGATAGAGAGGAGACAGAGAGAGAGGAGGAGCTTTATTTCGAATGCTCCTGACTCCTCCTCGGNTCCTCTTCCTCTCGAGCCCTTCACTGCNGTAGCATCATTCAAGCTGGACCC------TCCCAGATCAAATCAAACCCGNTGGGNTGGCCTTCCGTTTTGAGGGATTCTATATCTATAGGCTTGTCCATGGCATCAGTTACTTATCTTGATGATGCCCATTCTGAAGTTATCGATCCTCCAAAGAACGAGGAGATGCTGGATGTTACTGAACTTGTTGATGATCACACCCAGCATTCACCAAAACCGAATGCGATGGTCTCTGGCAATGTGCGTGAGCTACTGGAATGCCCTGTGTGTCTAAATGCCATGTATCCTCCAATTCATCAGTGCTCCAATGGNCATACTCTATGTTCCGGATGCAAGCCCAGGGGTCACAACCGGTGCCCAACTTGCAGACATGAATTGGGTAACATAAGATGCCTTGCTCTGGGAAAAGNAGCTGCATCACTAGAGCTTNCATGCAAATATCAAAACTTTTGGGNGCTTGGGCATATATCTTTATTACTGNAAGCTGAAGCATGAGTCACAGNGGCCATACAGGCCCTATACTTGNCCATATGCTGGATCTGAATGCACTGGTGCTGGGGACATTTAAGATCTAANAAGGCACTTGNAANATGATCATAAGGGNGACATGCNCAACGGAAGNNCCTT-AATAACCGTTATGTCAAATCAAATCCTCATGAAGTTGAGAATGCTACCTGGATGCTCACGGTTTTCAGCTGTTTCGGCCAGTACTTTTGCCTGCACTTTGAGGCATTCCAGTTGGGCATGGCACCTGTCTACATCGCCTTCCTACGGTTCATGGGAGATGATGCAGAAGCCAAGAACTATAGCTACAGCCTGGAGGTCGGAGGCAGTGGTCGGAAGATGACCTGGCAAGGCGTCCCCCGAAGCATCAGAGACAGTCACAGGAAAGTTCGGGACAGCTACGACGGCCTTATCATCCAGCGGAACATGGCCTTGTTCTTCTCCGGTGGCGACAAGAAGGAGCTCAAACTGCGTGTCACCGGAAGGATTTGGAAGGAGCAGTGAATCACAACATCTCTAACTTCTCGTTGCGACTGTTAGTTTGATTGCGACATGGATCTTGATTCTTGAATTTCCAGGGTGAAATGGGATTAATGCGTAAGCGAATTGCTCCGGGAACTAGCTAGGCAGGACCCTGTAAGATTGTAGACTGTCTTAGCTACCAGCTGCCATTCTTCTTCTAGTGGTTCAGGAACATTTTGTATGGATGATTGTCTCGTGGCACTGATGTAGTAGAATTGAAGGCAAATCTCTTCTTTGCTCTTAACTTCTCCAAGAATTAGCCAATCTGGCGAATCTTCTGATGGTGACTCTGCCAAATGTAAATGATGTAGCTCTCCCCTTTGTATGATTCAAATCTATGTCAGGCCACCATTGTTTTGCCGGAAATGTACCCCTGCCAAACCTGCATTTGCTCCTACTACTACATGTTCAGCTGTAAATTTGAACAC] [+] EMBL CA765332 [GAAAACCACAAGAGACCNTAAAAAACTTCCTCTGATAGAGAGGAGACAGAGAGAGAGGAGGAGCTTTATTTCGAATGCTCCTGACTCCTCCTCGGNTCCTCTTCCTCTCGAGCCCTTCACTGCNGTAGCATCATTCAAGCTGGACCC TCCCAGATCAAATCAAACCCGNTGGGNTGGCCTTCCGTTTTGAGGGATTCTATATCTATAGGCTTGTCCATGGCATCAGTTACTTATCTTGATGATGCCCATTCTGAAGTTATCGATCCTCCAAAGAACGAGGAGATGCTGGATGTTACTGAACTTGTTGATGATCACACCCAGCATTCACCAAAACCGAATGCGATGGTCTCTGGCAATGTGCGTGAGCTACTGGAATGCCCTGTGTGTCTAAATGCCATGTATCCTCCAATTCATCAGTGCTCCAATGGNCATACTCTATGTTCCGGATGCAAGCCCAGGGGTCACAACCGGTGCCCAACTTGCAGACATGAATTGGGTAACATAAGATGCCTTGCTCTGGGAAAAGNAGCTGCATCACTAGAGCTTNCATGCAAATATCAAAACTTTTGGGNGCTTGGGCATATATCTTTATTACTGNAAGCTGAAGCATGAGTCACAGNGGCCATACAGGCCCTATACTTGNCCATATGCTGGATCTGAATGCACTGGTGCTGGGGACATTTAAGATCTAANAAGGCACTTGNAANATGATCATAAGGGNGACATGCNCAACGGAAGNNCCTT AATAA ] [+] EMBL AK107155 [ TGCTCCTGACTCCTCCTCGGTTCCTCTTCCTCTCGAGCCCTTCACTGCAGTAGCATCATTCAAGCTGGACCCAAAGCATCCCAGATCAAATCAAACCCGCTGGTTTGGCCTTCCGTTTTGAGGGATTCTATATCTATAGGCTTGTCCATGGCATCAGTTACTTATCTTGATGATGCCCATTCTGAAGTTATCGATCCTCCAAAGAACGAGGAGATGCTGGATGTTACTGAACTTGTTGATGATCACACCCAGCATTCACCAAAACCGAATGCGATGGTCTCTGGCAATGTGCGTGAGCTACTGGAATGCCCTGTGTGTCTAAATGCCATGTATCCTCCAATTCATCAGTGCTCCAATGGTCATACTCTATGTTCCGGATGCAAGCCCAGGGTTCACAACCGCTGCCCAACTTGCAGACATGAATTGGGTAACATAAGATGCCTTGCTCTGGAAAAGGTAGCTGCATCACTAGAGCTTCCATGCAAATATCAGAAC TTTGGGTGCTTGGGCATATATCCTTATTACTGCAAGCTGAAGCATGAGTCACAGTGCCAATACAGGCCCTATACTTGCCCATATGCTGGATCTGAATGCACTGTTGCTGGTGACATTCAGTATCTAGTAAGTCACTTGAAAGATGATCATAAGGTTGACATGCACAACGGAAGCACCTTCAATCACCGTTATGTCAAATCAAATCCTCATGAAGTTGAGAATGCTACCTGGATGCTCACGGTTTTCAGCTGTTTCGGCCAGTACTTTTGCCTGCACTTTGAGGCATTCCAGTTGGGCATGGCACCTGTCTACATCGCCTTCCTACGGTTCATGGGAGATGATGCAGAAGCCAAGAACTATAGCTACAGCCTGGAGGTCGGAGGCAGTGGTCGGAAGATGACCTGGCAAGGCGTCCCCCGAAGCATCAGAGACAGTCACAGGAAAGTTCGGGACAGCTACGACGGCCTTATCATCCAGCGGAACATGGCCTTGTTCTTCTCCGGTGGCGACAAGAAGGAGCTCAAACTGCGTGTCACCGGAAGGATTTGGAAGGAGCAGTGAATCACAACATCTCTAACTTCTCGTTGCGACTGTTAGTTTGATTGCGACATGGATCTTGATTCTTGAATTTCCAGGGTGAAATGGGATTAATGCGTAAGCGAATTGCTCCGGGAACTAGCTAGGCAGGACCCTGTAAGATTGTAGACTGTCTTAGCTACCAGCTGCCATTCTTCTTCTAGTGGTTCAGGAACATTTTGTATGGATGATTGTCTCGTGGCACTGATGTAGTAGAATTGAAGGCAAATCTCTTCTTTGCTCTTAACTTCTCCAAGAATTAGCCAATCTGGCGAATCTTCTGATGGTGACTCTGCCAAATGTAAATGATGTAGCTCTCCCCTTTGTATGATTCAAATCTATGTCAGGCCACCATTGTTTTGCCGGAAATGTACCCCTGCCAAACCTGCATTTGCTCCTACTACTACATGTTCAGCTGTAAATTTGAACAC] consensusID : consensus_8316#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1471 fasta sequence [GAGAAGAGAGAGAGAGAGGCTTTTAATTCGAATTCTCTCTCTCATCACGGCTTCTTCTGCTTCTCCTTCTCCTCCCCCCTCATCCCTCCTCCGCCGGTAGCCGCCGGCCGGAAGCGAGCAGCGAGCGAGACCGGAGCCCGCCGGAGCCGGTCTCGCTCCCCCCTCCTCCCTTGTTCGCGCCGCCCCCGAGGACCCCTTACAATATCTAGTGTATTTATGGCCTCAGTTACTTATATTGATGACTCCGGTTCTGAGGTAATTGATCCTCCAAAGACTGAGGTGCTGGATGTTACCGAACTTGCTGGTGATCCTGTTCCGCATTCACCAAAACCAAATGTGGTAGTTTCTAGCAGTGTGCGTGAACTGCTTGAATGTCCAGTCTGCCTGAGCGCAATGTATCCTCCCATTCATCAGTGCTCTAATGGTCATACATTGTGCTCTGGATGCAAACCAAGGGTTCACAATCGCTGTCCAACTTGTAGGCATGAACTGGGTAATATTAGATGTCTTGCTCTCGAGAAGGTGGCTGCGTCGCTTGAACTTCCATGCAAGTACCAGAACTTCGGGTGTGTAGGCATTTATCCTTACTACTGCAAGCTGAAGCATGAGTCACAGTGCCAATATAGGCCTTATAGCTGTCCATATGCTGGATCTGAATGCACAGTTGCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGTTGACATGCATAATGGCTGCACCTTCAACCATCGCTATGTCAAGTCGAATCCTCATGAAGTTGAGAATGCCACCTGGATGCTTACGGTTTTCAGCTGCTTTGGCCAGTACTTCTGCCTACATTTCGAAGCATTTCAGCTGGGGATGGCACCTGTGTACATCGCCTTCCTGAGGTTCATGGGTGATGACTTGGAAGCAAAGAACTACAGCTACAGCCTGGAGGTAGGAGGCACTGGCCGCAAAATGATCTGGCAAGGGGTTCCCCGGAGCATCAGAGACAGCCATCGGAAGGTCCGGGATAGCTATGATGGGCTTATCATCCAACGGAACATGGCCTTGTTCTTCTCTGGTGGAGAAAGGAAGGAGCTCAAATTGCGGGTCACTGGGAGAATTTGGAAGGAACAGTGAAAATAAAATGTGAAATGATCTGTTCATCGTTCTTAACCCTTGCATGAACCTATGTATCATCACAGTGCGAGAATTATAGCCATTCATAGGCAGTGACTCTAAAATGAAGACTTGTAATGTTATTAGCTTGTTTTAGCTACCATCTTCTGTTAGATTGGTGCCTGTGGATGACTAGATGACAGTCATGTAGACCAGAGTGGCACTATTGTAGAATTCCTGGCAAACTTCTCTTTGCCTTGAACTGCTTGTTGAGTTGCCATTCTGTGGTATAGGGAAATCTAATGGCAATTCATGAGATGAATGTGTTGAACTCTTTTTCATGTTTCCAGCATATTTCTAGCTTCTTTGT] [+] EMBL AK058336 [GAGAAGAGAGAGAGAGAGGCTTTTAATTCGAATTCTCTCTCTCATCACGGCTTCTTCTGCTTCTCCTTCTCCTCCCCCCTCATCCCTCCTCCGCCGGTAGCCGCCGGCCGGAAGCGAGCAGCGAGCGAGACCGGAGCCCGCCGGAGCCGGTCTCGCTCCCCCCTCCTCCCTTGTTCGCGCCGCCCCCGAGGACCCCTTACAATATCTAGTGTATTTATGGCCTCAGTTACTTATATTGATGACTCCGGTTCTGAGGTAATTGATCCTCCAAAGACTGAGGTGCTGGATGTTACCGAACTTGCTGGTGATCCTGTTCCGCATTCACCAAAACCAAATGTGGTAGTTTCTAGCAGTGTGCGTGAACTGCTTGAATGTCCAGTCTGCCTGAGCGCAATGTATCCTCCCATTCATCAGTGCTCTAATGGTCATACATTGTGCTCTGGATGCAAACCAAGGGTTCACAATCGCTGTCCAACTTGTAGGCATGAACTGGGTAATATTAGATGTCTTGCTCTCGAGAAGGTGGCTGCGTCGCTTGAACTTCCATGCAAGTACCAGAACTTCGGGTGTGTAGGCATTTATCCTTACTACTGCAAGCTGAAGCATGAGTCACAGTGCCAATATAGGCCTTATAGCTGTCCATATGCTGGATCTGAATGCACAGTTGCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGTTGACATGCATAATGGCTGCACCTTCAACCATCGCTATGTCAAGTCGAATCCTCATGAAGTTGAGAATGCCACCTGGATGCTTACGGTTTTCAGCTGCTTTGGCCAGTACTTCTGCCTACATTTCGAAGCATTTCAGCTGGGGATGGCACCTGTGTACATCGCCTTCCTGAGGTTCATGGGTGATGACTTGGAAGCAAAGAACTACAGCTACAGCCTGGAGGTAGGAGGCACTGGCCGCAAAATGATCTGGCAAGGGGTTCCCCGGAGCATCAGAGACAGCCATCGGAAGGTCCGGGATAGCTATGATGGGCTTATCATCCAACGGAACATGGCCTTGTTCTTCTCTGGTGGAGAAAGGAAGGAGCTCAAATTGCGGGTCACTGGGAGAATTTGGAAGGAACAGTGAAAATAAAATGTGAAATGATCTGTTCATCGTTCTTAACCCTTGCATGAACCTATGTATCATCACAGTGCGAGAATTATAGCCATTCATAGGCAGTGACTCTAAAATGAAGACTTGTAATGTTATTAGCTTGTTTTAGCTACCATCTTCTGTTAGATTGGTGCCTGTGGATGACTAGATGACAGTCATGTAGACCAGAGTGGCACTATTGTAGAATTCCTGGCAAACTTCTCTTTGCCTTGAACTGCTTGTTGAGTTGCCATTCTGTGGTATAGGGAAATCTAATGGCAATTCATGAGATGAATGTGTTGAACTCTTTTTCATGTTTCCAGCATATTTCTAGCTTCTTTGT] consensusID : consensus_8316#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 674 fasta sequence [TAATGGTCATACATTGTGCTCCGGATGCAAACCAAGGGTTCACAATCGCCGTCCAACTCGTAGGCATGAACTGGGTAATATCAGATGTCTTGCTCTCGAGAAGGTGCCTGCGTCGCTTGAACTTCCATGCAAGTACCAGAACTTCGGGTGTGTAGGCATTTATCCTTACTACTGCAGCTGAAGCATGAGTCACAGTGCCAATATAGGCCTTATAGCTGTCCATATGCTGGATCTGAATGCACAGTTGCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGTTGACATGCATAATGGCTGCACCTTCAACCATCGCTATGTCAAGTCGAATCCTCATGAAGTTGAGAATGCCACCTGGATGCTTACGGTATCCCCTCGTTAACTCCACCATGTTAGTTATTGTGAAGTATATCACTGATGTTTACTTATGCAAAGATTGGTTCACTTGTCTGCTAAGATAGTCCATATTTCTGTACTGAGTTTTATGAGCCTTTCTGTAAAAATAAACATTGGTTCACTTGTACAGTATGATTGCACTCTGTACTTTTCATGTCAACTGAGGATGCTGATCATGCAGCATAGTTATTGGTCTAAAATAATCTCTCACCTATGAAGAAACTATGCATCAGAATATCCATCTGCTTCCATTTCCAAAAAAAA] [-] EMBL CA759515 [TAATGGTCATACATTGTGCTCCGGATGCAAACCAAGGGTTCACAATCGCCGTCCAACTCGTAGGCATGAACTGGGTAATATCAGATGTCTTGCTCTCGAGAAGGTGCCTGCGTCGCTTGAACTTCCATGCAAGTACCAGAACTTCGGGTGTGTAGGCATTTATCCTTACTACTGCAGCTGAAGCATGAGTCACAGTGCCAATATAGGCCTTATAGCTGTCCATATGCTGGATCTGAATGCACAGTTGCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGTTGACATGCATAATGGCTGCACCTTCAACCATCGCTATGTCAAGTCGAATCCTCATGAAGTTGAGAATGCCACCTGGATGCTTACGGTATCCCCTCGTTAACTCCACCATGTTAGTTATTGTGAAGTATATCACTGATGTTTACTTATGCAAAGATTGGTTCACTTGTCTGCTAAGATAGTCCATATTTCTGTACTGAGTTTTATGAGCCTTTCTGTAAAAATAAACATTGGTTCACTTGTACAGTATGATTGCACTCTGTACTTTTCATGTCAACTGAGGATGCTGATCATGCAGCATAGTTATTGGTCTAAAATAATCTCTCACCTATGAAGAAACTATGCATCAGAATATCCATCTGCTTCCATTTCCAAAAAAAA] consensusID : consensus_8316#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 648 fasta sequence [CTGTGTACATCCCCTTCCTGAGGTTCATGGGGGATGACTTGGAAGCAAAGAACTACAGCTCCACCCTGGAGGTAGGAGGCCCTGGCCGCAAAATGATTTGGCAAGGGGTTCCCCGGAGCATCAGAGACACCCATTGGAAGGTCCGGGATAGCTATGATGGGGTTATCATCCAACGGAACATGGCCTTGTTTTTTTTTGGGGGAGAAAGGAAGGAGCTCAAATTGGGGGTCCCTGGGGGAATTTGGAAGGACCAGTGAAAATAAAATGGGAAAGGATTTGTTCATCGTTTTTAACCCTTGCATGAACCTATGTTTCATCCCAGTGGGGGAATTTTAGCCATTCATAGGCAGGGACTTTAAAAAGAAGACTTGTAATGTTATTAGCTTGTTTTAGCTCCCATTTTTTGTTAGATTGGGGCCTGTGGATGACTAGATGCCAGTCATGTAGACCAGAGGGGCCCTATTGTAGAATTCTTGGCAAAATTTTTTTTCCCTTGAACTGCTTGTTGAGTTGCCATTTTGGGGTATAGGGAAATTTAATGGCAATTCATGAGAGGAATGGGTTGAACTTTTTTTCATGTTTCCAGCATATTTTTAGCTTTTTAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATAAAGA] [-] EMBL CB653854 [CTGTGTACATCCCCTTCCTGAGGTTCATGGGGGATGACTTGGAAGCAAAGAACTACAGCTCCACCCTGGAGGTAGGAGGCCCTGGCCGCAAAATGATTTGGCAAGGGGTTCCCCGGAGCATCAGAGACACCCATTGGAAGGTCCGGGATAGCTATGATGGGGTTATCATCCAACGGAACATGGCCTTGTTTTTTTTTGGGGGAGAAAGGAAGGAGCTCAAATTGGGGGTCCCTGGGGGAATTTGGAAGGACCAGTGAAAATAAAATGGGAAAGGATTTGTTCATCGTTTTTAACCCTTGCATGAACCTATGTTTCATCCCAGTGGGGGAATTTTAGCCATTCATAGGCAGGGACTTTAAAAAGAAGACTTGTAATGTTATTAGCTTGTTTTAGCTCCCATTTTTTGTTAGATTGGGGCCTGTGGATGACTAGATGCCAGTCATGTAGACCAGAGGGGCCCTATTGTAGAATTCTTGGCAAAATTTTTTTTCCCTTGAACTGCTTGTTGAGTTGCCATTTTGGGGTATAGGGAAATTTAATGGCAATTCATGAGAGGAATGGGTTGAACTTTTTTTCATGTTTCCAGCATATTTTTAGCTTTTTAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATAAAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8316#1 ---GAGAAGAGAGAGAGAGAGGCTTTTAATTCGAATTCTCTCTCTCATCACGGCTTCTTC 57 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 GAAAACCACAAGAGACCNTAAAAAACTTCCTCTGATAGAGAGGAGACAGAGAGAGAGGAG 60 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 TGCTTCTCCTTCTCCTCCCCCCTCATCCCTCCTCCGCCGGTAGCCGCCGGCCGGAAGCGA 117 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 GAGCTTTATTTCGAATGCTCCTGACTCCTCCTCGGNTCCTCTTCCTCTCGAGCCCTTCAC 120 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 GCAGCGAGCGAGACCGGAGCCCGCCGGAGCCGGTCTCGCTCCCCCCTCCTCCCTTGTTCG 177 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 TGCNGTAGCATCATTCAAGCTGGACCCTCCCAGATCAAATCAAACCCGNTGGGNTGGCCT 180 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 CGCCGCCCCCGAGGACCCCTTACAATATCTAGTGTATTTATGGCCTCAGTTACTTATATT 237 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 TCCGTTTTGAGGGATTCTATATCTATAGGCTTGTCCATGGCATCAGTTACTTATCTTGAT 240 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 GATGACTCCGGTTCTGAGGTAATTGATCCTCCAAAGACTGAGGTGCTGGATGTTACCGAA 297 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 GATGCCCATTCTGAAGTTATCGATCCTCCAAAGAACGAGGAGATGCTGGATGTTACTGAA 300 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 CTTGCTGGTGATCCTGTTCCGCATTCACCAAAACCAAATGTGGTAGTTTCTAGCAGTGTG 357 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 CTTGTTGATGATCACACCCAGCATTCACCAAAACCGAATGCGATGGTCTCTGGCAATGTG 360 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 CGTGAACTGCTTGAATGTCCAGTCTGCCTGAGCGCAATGTATCCTCCCATTCATCAGTGC 417 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 CGTGAGCTACTGGAATGCCCTGTGTGTCTAAATGCCATGTATCCTCCAATTCATCAGTGC 420 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 TCTAATGGTCATACATTGTGCTCTGGATGCAAACCAAGGGTTCACAATCGCTGTCCAACT 477 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 TCCAATGGNCATACTCTATGTTCCGGATGCAAGCCCAGGGGTCACAACCGGTGCCCAACT 480 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 TGTAGGCATGAACTGGGTAATATTAGATGTCTTGCTCTCGAGAAGGTGGCTGCGTCGCTT 537 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 TGCAGACATGAATTGGGTAACATAAGATGCCTTGCTCTGGGAAAAGNAGCTGCATCACTA 540 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 GAACTTCCATGCAAGTACCAGAACTTC-GGGTGTGTAGGCATTTATCCTTACTACTGCAA 596 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 GAGCTTNCATGCAAATATCAAAACTTTTGGGNGCTTGGGCATATATCTTTATTACTGNAA 600 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 GCTGAAGCATGAGTCACAGTGCCAATATAGGCCTTATAGCTGTCCATATGCTGGATCTGA 656 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 GCTGAAGCATGAGTCACAGNGGCCATACAGGCCCTATACTTGNCCATATGCTGGATCTGA 660 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 ATGCACAGTTGCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGT 716 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 ATGCACTGGTGCTGGGGACATTTAAGATCTAANAAGGCACTTGNAANATGATCATAAGGG 720 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 TGACATGCATAATGGCTGCACCTTCAACCATCGCTATGTCAAGTCGAATCCTCATGAAGT 776 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 NGACATGCNCAACGGAAGNNCCTT-AATAACCGTTATGTCAAATCAAATCCTCATGAAGT 779 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 TGAGAATGCCACCTGGATGCTTACGGTTTTCAGCTGCTTTGGCCAGTACTTCTGCCTACA 836 consensus_8316#3 ------------------------------------------------------------ consensus_8316#0 TGAGAATGCTACCTGGATGCTCACGGTTTTCAGCTGTTTCGGCCAGTACTTTTGCCTGCA 839 consensus_8316#2 ------------------------------------------------------------ consensus_8316#1 TTTCGAAGCATTTCAGCTGGGGATGGCACCTGTGTACATCGCCTTCCTGAGGTTCATGGG 896 consensus_8316#3 -----------------------------CTGTGTACATCCCCTTCCTGAGGTTCATGGG 31 consensus_8316#0 CTTTGAGGCATTCCAGTTGGGCATGGCACCTGTCTACATCGCCTTCCTACGGTTCATGGG 899 consensus_8316#2 -----------------------------------------------TAATGGTCATACA 13 * * **** consensus_8316#1 TGATGACTTGGAAGCAAA---GAACTACAGCTACAGCCTGGAGGTAGGAGGCACTGGCCG 953 consensus_8316#3 GGATGACTTGGAAGCAAA---GAACTACAGCTCCACCCTGGAGGTAGGAGGCCCTGGCCG 88 consensus_8316#0 AGATGATGCAGAAGCCAA---GAACTATAGCTACAGCCTGGAGGTCGGAGGCAGTGGTCG 956 consensus_8316#2 TTGTGCTCCGGATGCAAACCAAGGGTTCACAATCGCCGTCCAACTCGTAGGCATGAACTG 73 ** ** ** ** * * * * * * * * **** * consensus_8316#1 CAAAATGATCTGGCAAGGGGTTCCCCGGAGCATCAGAGACAGCCATCGGAAGGTCCGGGA 1013 consensus_8316#3 CAAAATGATTTGGCAAGGGGTTCCCCGGAGCATCAGAGACACCCATTGGAAGGTCCGGGA 148 consensus_8316#0 GAAGATGACCTGGCAAGGCGTCCCCCGAAGCATCAGAGACAGTCACAGGAAAGTTCGGGA 1016 consensus_8316#2 GGTAAT-ATCAGATGTCTTGCTCTCGAGAAGGTGCCTGC--GTCGCTTGAACTTCCATG- 129 ** * * * * * * * * * *** * * * consensus_8316#1 TAGCTATGATGGGCTTATCATCCAACGGAACATGGCCTTGTTCTTCTCTGGTGGAGAAAG 1073 consensus_8316#3 TAGCTATGATGGGGTTATCATCCAACGGAACATGGCCTTGTTTTTTTTTGGGGGAGAAAG 208 consensus_8316#0 CAGCTACGACGGCCTTATCATCCAGCGGAACATGGCCTTGTTCTTCTCCGGTGGCGACAA 1076 consensus_8316#2 CAAGTACCA-GAACTTCGGGTGTGTAGGCATTTATCCTTACTACTGCAGCTGAAGCATGA 188 * ** * * ** * ** * * **** * * * consensus_8316#1 GAAGGAGCTCAAATTGCGGGTCACTGGGAGAATTTGGAAGGAACAGTGAAA-ATAAAATG 1132 consensus_8316#3 GAAGGAGCTCAAATTGGGGGTCCCTGGGGGAATTTGGAAGGACCAGTGAAA-ATAAAATG 267 consensus_8316#0 GAAGGAGCTCAAACTGCGTGTCACCGGAAGGATTTGGAAGGAGCAGTGAATCACAACATC 1136 consensus_8316#2 GTCACAGTGCCAATATAGG--CCTTATAGCTGTCCATATGCTGGATCTGAATGCACAGTT 246 * ** * ** * * * * * * * * * consensus_8316#1 TGAAATGATCTGTTC--ATCGTT--CTTAACCCTTGCATGAACCTATGTATC---ATCAC 1185 consensus_8316#3 GGAAAGGATTTGTTC--ATCGTT--TTTAACCCTTGCATGAACCTATGTTTC---ATCCC 320 consensus_8316#0 TCTAACTTCTCGTTGCGACTGTTAGTTTGATTGCGACATGGATCTTGATTCTTGAATTTC 1196 consensus_8316#2 GCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGTTGACATGCAT 306 * * * *** consensus_8316#1 AGTGC-GAGAATTATAGCCATTCATAGGCA----------GTGACTCTAAAATGAAGACT 1234 consensus_8316#3 AGTGG-GGGAATTTTAGCCATTCATAGGCA----------GGGACTTTAAAAAGAAGACT 369 consensus_8316#0 CAGGG-TGAAATGGGATTAATGCGTAAGCGAATTGCTCCGGGAACTAGCTAGGCAGGACC 1255 consensus_8316#2 AATGGCTGCACCTTCAACCATCGCTATGTCAAGT-----CGAATCCTCATGAAGTTGAGA 361 * * * ** ** * * * ** consensus_8316#1 -TGTAATGTTATTAGCTTGTTTTAGCTACCATCTT---CTGTTAGATTGGTGCCTGTGGA 1290 consensus_8316#3 -TGTAATGTTATTAGCTTGTTTTAGCTCCCATTTT---TTGTTAGATTGGGGCCTGTGGA 425 consensus_8316#0 CTGTAAGATTGT-AGACTGTCTTAGCTACCAGCTGCCATTCTTCTTCTAGTGGTTCAGGA 1314 consensus_8316#2 ATGCCAC-CTGGATGCTTACGGTATCCCCTCGTTAACTCCACCATGTTAGTTATTGTGAA 420 ** * * * * ** * * * * * * * * consensus_8316#1 TGACTAGATGACAGTCATGTAGACCAGAGTGGCACTATTGTAGAATTCCTGGCAAA-CTT 1349 consensus_8316#3 TGACTAGATGCCAGTCATGTAGACCAGAGGGGCCCTATTGTAGAATTCTTGGCAAA-ATT 484 consensus_8316#0 ACATTTTGTATGGATGAT-TGTCTCGTGGCACTGATGTAGTAGAATTGAAGGCAAATCTC 1373 consensus_8316#2 -----GTATATCACTGATGTTTACTTATGCAAAGAT-TGGTTCACTTGTCTGCTAAGATA 474 * * ** * * * * ** * ** ** ** * consensus_8316#1 CTCTTTGCCT-TGAACTGCTTGTTGAGTT-GCCATTCTGTGGTATAGGGAAATC-TAATG 1406 consensus_8316#3 TTTTTTCCCT-TGAACTGCTTGTTGAGTT-GCCATTTTGGGGTATAGGGAAATT-TAATG 541 consensus_8316#0 TTCTTTGCTC-TTAACTTCTCCAAGAATTAGCCAATCTGGCGAATCTTCTGATGGTGACT 1432 consensus_8316#2 GTCCATATTTCTGTACTGAGTTTT--ATGAGCCTTTCT---GTAAAAATAAACATTGGTT 529 * * * *** * *** * * * * * * consensus_8316#1 GCAATTCATGAGATGAATGTGTTGAACTCTTTTTCATGTTTCCAGCATATTTCTAGCT-- 1464 consensus_8316#3 GCAATTCATGAGAGGAATGGGTTGAACTTTTTTTCATGTTTCCAGCATATTTTTAGCT-- 599 consensus_8316#0 CTGCCAAATGTAAATGATGTAGCTCTCCCCTTTGTATGATTCAAATCTATGTCAGGCCAC 1492 consensus_8316#2 CACTTGTACAGTATGATTGCACT-CTGTACTTTTCATGTCAACTGAGGATGCTGATCATG 588 * * ** *** *** ** * consensus_8316#1 -----T-----CTTTGT------------------------------------------- 1471 consensus_8316#3 -----T-----TTTAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATAAAGA- 648 consensus_8316#0 CATTGT-----TTTGCCGGAAATGTACCCCTGCCAAACCTGCATTTGCTCCTACTACTAC 1547 consensus_8316#2 CAGCATAGTTATTGGTCTAAAATAATCTCTCACCTATGAAGAAACTATGCATCAGAATAT 648 * * consensus_8316#1 -------------------------- consensus_8316#3 -------------------------- consensus_8316#0 ATGTTCAGCTGTAAATTTGAACAC-- 1571 consensus_8316#2 CCATCTGCTTCCATTTCCAAAAAAAA 674 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||