These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8346#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 854 fasta sequence [ATCGGAAGCAAATCATCTTCCTAGTGCATACAAGTTAGCTCATCATCAGCACTAGTACAGTACTACTAGACAGTTGTACGTACAAGTAGAAGTAGCTACCCAA-CCTTGGGAGAGATGGAGATTCCAGTGATTGATCTCAAGGGGCTCGCCGGCGG-CGACG-AAGAAAGGGAGCGCACCATGGCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTGGAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCT-GGAGAAGAAATTCTACGCCTCCGACCTCGCCAAGAACCTCCACCTGAACAAGGACGACGGCGACGTCCTCGTCGACGGCGGCGACC--TCGCCGACCA-GGCCGAC-TGGGAGGCCACCTAC-TTCATCCAGC-ACCGCCCCAAGAACACCGCCGCCGACTTCCCGGACAT-CCCGCCGGCGGCGAGGGAGTCCCTGGACGCGTACATCGCGCAGGCGGTGTCCCTCGCCGAGCTGCTCGCCGGCTGCATCAGCACCAACCTGGGC-CTCGCCGGCGCCGCCGGCGTCGTGGACGCCTTCGCGCCGCCGTTCGTCGGCACCAAGTTCGCCATGTACCCACCGTGCCCGCGCCCGGACCTCGTCTGGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCCTCCAGGACGACGCCGTCGGCGGGCTCGAGTTCCA-CCGCGGCGGCCGCGAGTGGGTCCCCGTCGGCCCGACCCGGCGCGGCCGGCTGTTCGTCAACATCGGCGACCAGGTGGAGGTGCTCAGCGGCGGCGCCTACAAGAGCGTCGTGCACCGCGT] [+] EMBL AK102472 [ATCGGAAGCAAATCATCTTCCTAGTGCATACAAGTTAGCTCATCATCAGCACTAGTACAGTACTACTAGACAGTTGTACGTAC AGTAGAAGTAGCTACCCAA CCTTGGGAGAGATGGAGATTCCAGTGATTGATCTCAAGGGGCTCGCCGGCGG CGACG AAGAAAGGGAGCGCACCATGGCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTGGAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCT GGAGAAGAAATTCTACGCCTCCGACCTCGCCAAGAACCTCCACCTGAACAAGGACGACGGCGACGTCCTCGTCGACGGCGGCGACC TCGCCGACCA GGCCGAC TGGGAGGCCACCTAC TTCATCCAGC ACCGCCCCAAGAACACCGCCGCCGACTTCCCGGACAT CCCGCCGGCGGCGAGGGAGTCCCTGGACGCGTACATCGCGCAGGCGGTGTCCCTCGCCGAGCTGCTCGCCGGCTGCATCAGCACCAACCTGGGC CTCGCCGGCGCCGCCGGCGTCGTGGACGCCTTCGCGCCGCCGTTCGTCGGCACCAAGTTCGCCATGTACCCACCGTGCCCGCGCCCGGACCTCGTCTGGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCCTCCAGGACGACGCCGTCGGCGGGCTCGAGTTCCA CCGCGGCGGCCGCGAGTGGGTCCCCGTCGGCCCGACCCGGCGCGGCCGGCTGTTCGTCAACATCGGCGACCAGGTGGAGGTGCTCAGCGGCGGCGCCTACAAGAGCGTCGTGCACCGCGT] [+] EMBL OS1321788 [ AATCATCTTCCTAGTGCATACAAGTTAGCTCATCATCAGCACTAGTACAGTACTACTAGACAGTTGTACGTACAAGTAGAAGTAGCTACCCAA CCTTGGGAGAGATGGAGATTCCAGTGATTGATCTCAAGGGGCTCGCCGGCGGNCG N AAGAAAGGGAGCGCACCATGGCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTGGAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCTGGGAGAAGAAATTCTACGNCTCCGACCTCGCCAAGAACCTCCACCTGAACAAGGACGACGGCGACGTCCTCGTCGACGGCNGCGACCCTTCGCNACCCAGGGCCGACTTGGGANGCCACCTACTTTCATCCAGCAACNGCCCCAAGAACAacc ] [+] EMBL C27913 [ GCATACAAGTTAGCTCATCATCAGCACTAGTACAGTACTACTAGACAGTTGTACGTACAAGTAGAAGTAGCTACCCAA CCTTGGGAGANATGGAGATTCCAGTGATTGATCTCAAGGGGCTCGCCGGCGG NACGNAAGAAAGGGAGCGCACCATGGCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTGGAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCT TGGGGAGGAATTNTACGCCTCCGACCTTGCCAAGAAC ] [+] EMBL BI805731 [ ACAAGTTAGCTCATCATCACCACTAGTACAGTACTACTAGACAGTTGTACGTACAAGTAGAAGTAGCTACCCAACCCTTGGGAGAGATGGAGATTCCAGTGATTGATCTCAAGGGGCTCGCC GCGG CGACG AAGAAAGGGAGCGCACCATGGCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTGGAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCT GGAGAAGAAATTCTACGCCTCCGACCTCGCCAAGAACCTCCACCTGAACAAGGACGACGGCGACGTCCTCGTCGACGGCGGCGACC TCGCCGACCA GGCCGAC TGGGAGGCCACCTAC TTCATCCAGC ACCGCCCCAAGAACACCGCCGCCGACTTCCCGGACAT CCCGCCGGCGGCGAGGGAGTCCCTGGACGCGTACATCGCGCAGGCGGTGTCCCTCGCCGAGCTGCTCGCCGGCTGCATCAGCACCAACCTGGGC CTCGCCGGCGCCGCCGGCGTCGT GACGCCTTCGCGCC CCGTTCGTCGGCACCAAGTTCGCCATGTACCCACCGTGCCCGCGCCCGGACCTCGTCTGGGGCCTCCGCGCCCACACCGACGCC GCGGCATCATCCTGCTCCTCCAGGACGAC CC TC GCGGGCTCGAGTTCCACCCGCGccc ] [+] EMBL AU161082 [ TGGGAGGCCACCTAC TTCATCCAGC ACCGCCCCAAGAACACCGCCGCCGACTTCCCGGANATNCCCGCCGGCGGCGAGGGAGTCCCTGGACGCGTACATCGCGCAGGCGGTGTCCCTCGCCGAGCTGCTCGCCGGCTGCATCAGCACCAACCTGGGCTCTNGCCGGCGCCGCCGGTGTCGTGGACGCCTTCGCGCCGCCGTTCGTCGGCACCAAGTTCGCCATGTACCCACCGTGCCCGCGCCCGGACCTCGTCTGGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCCTCCAGGACGACGCCGTCGGCGGGCTCGAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||