Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8351 cluster # 8351       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8351#0 length = 1464 sequences # 3  
consensus_8351#1 length = 692 sequences # 1  
consensus_8351#2 length = 679 sequences # 1  

consensusID : consensus_8351#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1464
fasta sequence
                              [TCATTGTGCCTTCTTTCTTCTTCTTCTTCTTGAGCTGAGCCTCCTCCTAAGGCCTCTCTTGTATATACACATTTTGTATAGATTTTTAGAGTTATATCACAGTCTCATCAGCTCTTGCAACTTCCCATTGCAAGAGTTTGATTGATTGATTGGTTGATCAGCTGGTGTTCCAAATGGATCCAATCAGCATAGAGAAGATCAGGGCCATGAGCAAGTGCAGCAACTGCAAGAGGCAGCATCCGATGATCCTCCCTGCCCTGGCAATCTCCATGGTTGCCACCTTTGTTCTTCTCCTGCTGGTGACCAGCCCTGTCTGGGTCCCAAGGCTGTGCTCACTCATGGCCTTCTTCTTCCTCACCACCCTCCCTGACCTTGCCATGGCCTTCCTCCTCAGCCCCAAGTGCCTCTTCGTCGTCGGCAACCTCATCGTCGCCTTCCTCGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGCGTCGTCGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGATAAGCGCAAAGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGGGGGAGGAAGAAGAGCTGCACCAGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGACAAGAGCATGTTTGACACTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAGGGATTATTGCATCCAAATTAAGGATTCTTGTGATGCTTTAGTTTTTCATCTATCATCTTAGGGCCAGAGTTAAGAAGAAGAAGAGTTCACTTCACTGGCTCACTGCACTGTAGGAGATTATGCATGCACCCTTTTGATTAGAGTGTGTCTGATGATCTGATCCGGTTTAGCCATGCACAAGAATTAGGCAGAGAAAAAAAGAGAGACAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAGAAAAAGAAAAGTGATGCATGTGTCTTTCTCTTATCGATCTTTGCTTTGAGCCTAATTGCATATGTAATGCCGCAATTATTACATCACTTATCCTGAGGAACAATGAGGCCAAGTACACTCAACCTGATCACCTCTCAGTTGTCGGGATAACAAAGTTGCTCAACACAAACAGTGCAAGGCAAAAGCTTAGCATTTTTGTGATTTTTCTGAAACGTTTTCTTAAGCAGCTGGCACATAAATATGTGCCCGGTCAACTCAGTTTTCTTTTCCTTTTTGGAAGGCAGCTAGCAAAATTTGATAGTAATTCGATTTCCAAATTCCTGCAACTTATATTAATTGCAAATAGTTTTTTTAAAAAAAACATCAGATTTTGGATCGTTCCTAATGCAAAATATTGAGATCTGCAATTTGTTTCAAGGAACCTTAGATTTAATAAAACCTCTC]

[+] EMBL AK059879             [TCATTGTGCCTTCTTTCTTCTTCTTCTTCTTGAGCTGAGCCTCCTCCTAAGGCCTCTCTTGTATATACACATTTTGTATAGATTTTTAGAGTTATATCACAGTCTCATCAGCTCTTGCAACTTCCCATTGCAAGAGTTTGATTGATTGATTGGTTGATCAGCTGGTGTTCCAAATGGATCCAATCAGCATAGAGAAGATCAGGGCCATGAGCAAGTGCAGCAACTGCAAGAGGCAGCATCCGATGATCCTCCCTGCCCTGGCAATCTCCATGGTTGCCACCTTTGTTCTTCTCCTGCTGGTGACCAGCCCTGTCTGGGTCCCAAGGCTGTGCTCACTCATGGCCTTCTTCTTCCTCACCACCCTCCCTGACCTTGCCATGGCCTTCCTCCTCAGCCCCAAGTGCCTCTTCGTCGTCGGCAACCTCATCGTCGCCTTCCTCGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGCGTCGTCGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGATAAGCGCAAAGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGGGGGAGGAAGAAGAGCTGCACCAGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGACAAGAGCATGTTTGACACTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAGGGATTATTGCATCCAAATTAAGGATTCTTGTGATGCTTTAGTTTTTCATCTATCATCTTAGGGCCAGAGTTAAGAAGAAGAAGAGTTCACTTCACTGGCTCACTGCACTGTAGGAGATTATGCATGCACCCTTTTGATTAGAGTGTGTCTGATGATCTGATCCGGTTTAGCCATGCACAAGAATTAGGCAGAGAAAAAAAGAGAGACAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAGAAAAAGAAAAGTGATGCATGTGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK071017             [  ATTGTGCCTTCTTTCTTCTTCTTCTTCTTGAGCTGAGCCTCCTCCTAAGGCCTCTCTTGTATATACACATTTTGTATAGATTTTTAGAGTTATATCACAGTCTCATCAGCTCTTGCAACTTCCCATTGCAAGAGTTTGATTGATTGATTGGTTGATCAGCTGGTGTTCCAAATGGATCCAATCAGCATAGAGAAGATCAGGGCCATGAGCAAGTGCAGCAACTGCAAGAGGCAGCATCCGATGATCCTCCCTGCCCTGGCAATCTCCATGGTTGCCACCTTTGTTCTTCTCCTGCTGGTGACCAGCCCTGTCTGGGTCCCAAGGCTGTGCTCACTCATGGCCTTCTTCTTCCTCACCACCCTCCCTGACCTTGCCATGGCCTTCCTCCTCAGCCCCAAGTGCCTCTTCGTCGTCGGCAACCTCATCGTCGCCTTCCTCGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGCGTCGTCGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGATAAGCGCAAAGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGGGGGAGGAAGAAGAGCTGCACCAGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGACAAGAGCATGTTTGACACTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAGGGATTATTGCATCCAAATTAAGGATTCTTGTGATGCTTTAGTTTTTCATCTATCATCTTAGGGCCAGAGTTAAGAAGAAGAAGAGTTCACTTCACTGGCTCACTGCACTGTAGGAGATTATGCATGCACCCTTTTGATTAGAGTGTGTCTGATGATCTGATCCGGTTTAGCCATGCACAAGAATTAGGCAGAGAAAAAAAGAGAGACAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAGAAAAAGAAAAGTGATGCATGTGTCTTTCTCTTATCGATCTTTGCTTTGAGCCTAATTGCATATGTAATGCCGCAATTATTACATCACTTATCCTGAGGAACAATGAGGCCAAGTACACTCAACCTGATCACCTCTCAGTTGTCGGGATAACAAAGTTGCTCAACACAAACAGTGCAAGGCAAAAGCTTAGCATTTTTGTGATTTTTCTGAAACGTTTTCTTAAGCAGCTGGCACATAAATATGTGCCCGGTCAACTCAGTTTTCTTTTCCTTTTTGGAAGGCAGCTAGCAAAATTTGATAGTAATTCGATTTCCAAATTCCTGCAACTTATATTAATTGCAAATAGTTTTTTTAAAAAAAACATCAGATTTTGGATCGTTCCTAATGCAAAATATTGAGATCTGCAATTTGTTTCAAGGAACCTTAGATTTAATAAAACCTCTC]
[+] EMBL OSS1317A             [                                                                            TATAGATTTTTAGAGTTATATCACAGTCTCATCAGCTCTTGCAACTTCCCATTGCAAGAGTTTGATTGATTGATTGGTTGATCAGCTGGTGTTCCAAATGGATCCAATCAGCATAGAGAAGATCAGGGCCATGAGCAAGTGCAGCAACTGCAAGAGGCAGCATCCGATGATCCTCCCTGCCCTGGCAATCTCCATGGTTGCCACCTTTGTTCTTCTCCTGCTGGTGACCAGCCCTGTCTGGGTCCCAAGGCTGTGCTCACTCATGGCCTTCTTCTTCCTCAACACCCTCCCTGACCTTGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_8351#0 TCATTGTGCCTTCTTTCTTCTTCTTCTTCTTGAGCTGAGCCTCCTCCTAAGGCCTCTCTT GTATATACACATTTTGTATAGATTTTTAGAGTTATATCACAGTCTCATCAGCTCTTGCAA CTTCCCATTGCAAGAGTTTGATTGATTGATTGGTTGATCAGCTGGTGTTCCAAATGGATC CAATCAGCATAGAGAAGATCAGGGCCATGAGCAAGTGCAGCAACTGCAAGAGGCAGCATC CGATGATCCTCCCTGCCCTGGCAATCTCCATGGTTGCCACCTTTGTTCTTCTCCTGCTGG TGACCAGCCCTGTCTGGGTCCCAAGGCTGTGCTCACTCATGGCCTTCTTCTTCCTCACCA CCCTCCCTGACCTTGCCATGGCCTTCCTCCTCAGCCCCAAGTGCCTCTTCGTCGTCGGCA ACCTCATCGTCGCCTTCCTCGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGCGT CGTCGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGATAAGCGCAA AGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAG AAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGGGGGAGGAAGAAGAGCTGCACC AGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGACAAGAGCA TGTTTGACACTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAG GGATTATTGCATCCAAATTAAGGATTCTTGTGATGCTTTAGTTTTTCATCTATCATCTTA GGGCCAGAGTTAAGAAGAAGAAGAGTTCACTTCACTGGCTCACTGCACTGTAGGAGATTA TGCATGCACCCTTTTGATTAGAGTGTGTCTGATGATCTGATCCGGTTTAGCCATGCACAA GAATTAGGCAGAGAAAAAAAGAGAGACAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAG AAAAAGAAAAGTGATGCATGTGTCTTTCTCTTATCGATCTTTGCTTTGAGCCTAATTGCA TATGTAATGCCGCAATTATTACATCACTTATCCTGAGGAACAATGAGGCCAAGTACACTC AACCTGATCACCTCTCAGTTGTCGGGATAACAAAGTTGCTCAACACAAACAGTGCAAGGC AAAAGCTTAGCATTTTTGTGATTTTTCTGAAACGTTTTCTTAAGCAGCTGGCACATAAAT ATGTGCCCGGTCAACTCAGTTTTCTTTTCCTTTTTGGAAGGCAGCTAGCAAAATTTGATA GTAATTCGATTTCCAAATTCCTGCAACTTATATTAATTGCAAATAGTTTTTTTAAAAAAA ACATCAGATTTTGGATCGTTCCTAATGCAAAATATTGAGATCTGCAATTTGTTTCAAGGA ACCTTAGATTTAATAAAACCTCTC



consensusID : consensus_8351#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 692
fasta sequence
                              [TATNGTCGCCTTCCTTGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGNATTGTTGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGACAAGCGCAAAGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAGGGGGAGGAAGAAGAGCTGCACCAGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGACAAGAGCATGTTTGACACTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAGGGATTATTGCATCCAAATTAAGGATTCCTGTGATGCTTTAGTTTTTCATCTATCATCTTAGGGCCAGAGTTAAGAAGAAGAAGAGTTCCCTTCACTGGCTCACTGCACTGTAGGAGATTATGCATGCACCCTTTTGATTAGAGTGTGTCTGATGATCTGATCCGGTTTAGCCATGCCCAAGAATTAGGCAGAGAAAAAAAGAGAGCCAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAGAAAAAGAAAAGTGATGCGTGTGTCTTTCTCTTATCGATCTTTGCTTTGAGCCTAATTGCATATGTAATGTCGCAATTATTACCTCAAAAAAAAAAAAAA]

[-] EMBL CA759778             [TATNGTCGCCTTCCTTGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGNATTGTTGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGACAAGCGCAAAGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAGGGGGAGGAAGAAGAGCTGCACCAGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGACAAGAGCATGTTTGACACTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAGGGATTATTGCATCCAAATTAAGGATTCCTGTGATGCTTTAGTTTTTCATCTATCATCTTAGGGCCAGAGTTAAGAAGAAGAAGAGTTCCCTTCACTGGCTCACTGCACTGTAGGAGATTATGCATGCACCCTTTTGATTAGAGTGTGTCTGATGATCTGATCCGGTTTAGCCATGCCCAAGAATTAGGCAGAGAAAAAAAGAGAGCCAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAGAAAAAGAAAAGTGATGCGTGTGTCTTTCTCTTATCGATCTTTGCTTTGAGCCTAATTGCATATGTAATGTCGCAATTATTACCTCAAAAAAAAAAAAAA]


>consensus_8351#1 TATNGTCGCCTTCCTTGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGNATTGTT GTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGACAAGCGCAAAGGC GGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAGAAGA GGAAGAAGAAGAGGAGGAAGAGGAAGAAGAGGGGGAGGAAGAAGAGCTGCACCAGAGAGT AGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGACAAGAGCATGTTTGA CACTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAGGGATTAT TGCATCCAAATTAAGGATTCCTGTGATGCTTTAGTTTTTCATCTATCATCTTAGGGCCAG AGTTAAGAAGAAGAAGAGTTCCCTTCACTGGCTCACTGCACTGTAGGAGATTATGCATGC ACCCTTTTGATTAGAGTGTGTCTGATGATCTGATCCGGTTTAGCCATGCCCAAGAATTAG GCAGAGAAAAAAAGAGAGCCAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAGAAAAAGA AAAGTGATGCGTGTGTCTTTCTCTTATCGATCTTTGCTTTGAGCCTAATTGCATATGTAA TGTCGCAATTATTACCTCAAAAAAAAAAAAAA



consensusID : consensus_8351#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence
                              [AGTGCCTCTTTGTNGTCGGCAACCTNATNGTCGCCTTCCTNGTNGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGNATTGTNGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGCCAAGCGCAAAGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGGGGGAGGAAGAAGAGCTGCCCCAGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGCCAAGAGCATGTTTGCCCCTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAGGGATTATTGCATCCAAATTAAGGATTCCTGTGGGGCTTTAGTTTTTCATCTATCATTTTAGGGCCAGAGTTAAGAAGAAGAAGAGTTCCCTTCCCTGGCTCCCTGCCCTGTAGGAGATTATGCATGCCCCCTTTTGATTAGAGGGTGTTTGATGATCTGATCCGGTTTAGCCATGCCCAAGAATTAGGCAGAGAAAAAAAGAGAGCCAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAGAAAAAGAAAAGTGATGCATGTGTCTTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA759777             [AGTGCCTCTTTGTNGTCGGCAACCTNATNGTCGCCTTCCTNGTNGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGNATTGTNGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGCCAAGCGCAAAGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGGGGGAGGAAGAAGAGCTGCCCCAGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGCCAAGAGCATGTTTGCCCCTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAGGGATTATTGCATCCAAATTAAGGATTCCTGTGGGGCTTTAGTTTTTCATCTATCATTTTAGGGCCAGAGTTAAGAAGAAGAAGAGTTCCCTTCCCTGGCTCCCTGCCCTGTAGGAGATTATGCATGCCCCCTTTTGATTAGAGGGTGTTTGATGATCTGATCCGGTTTAGCCATGCCCAAGAATTAGGCAGAGAAAAAAAGAGAGCCAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAGAAAAAGAAAAGTGATGCATGTGTCTTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8351#2 AGTGCCTCTTTGTNGTCGGCAACCTNATNGTCGCCTTCCTNGTNGGCGAGTCTAGGCTCG CCCCGAGGGGGGAGCCGGNATTGTNGTCGGTGAATGAGATACATGACGAACATGTTAAGA GGAACGCCGCGCCAAGCGCAAAGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTC ATGTTGGAGAATTGGGGGAAGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGG GGGAGGAAGAAGAGCTGCCCCAGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGA GGAGAATGGAGGCCAAGAGCATGTTTGCCCCTGATCGATGACCTGATGAGTTTTACCTTG GATTTGGAAGATTCAAAGAAGGGATTATTGCATCCAAATTAAGGATTCCTGTGGGGCTTT AGTTTTTCATCTATCATTTTAGGGCCAGAGTTAAGAAGAAGAAGAGTTCCCTTCCCTGGC TCCCTGCCCTGTAGGAGATTATGCATGCCCCCTTTTGATTAGAGGGTGTTTGATGATCTG ATCCGGTTTAGCCATGCCCAAGAATTAGGCAGAGAAAAAAAGAGAGCCAAGGAATGTGTG TGTGATCTTTTGAAAAAGCAGAAAAAGAAAAGTGATGCATGTGTCTTTCTTTTAAAAAAA AAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8351#0      TCATTGTGCCTTCTTTCTTCTTCTTCTTCTTGAGCTGAGCCTCCTCCTAAGGCCTCTCTT 60
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      GTATATACACATTTTGTATAGATTTTTAGAGTTATATCACAGTCTCATCAGCTCTTGCAA 120
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      CTTCCCATTGCAAGAGTTTGATTGATTGATTGGTTGATCAGCTGGTGTTCCAAATGGATC 180
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      CAATCAGCATAGAGAAGATCAGGGCCATGAGCAAGTGCAGCAACTGCAAGAGGCAGCATC 240
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      CGATGATCCTCCCTGCCCTGGCAATCTCCATGGTTGCCACCTTTGTTCTTCTCCTGCTGG 300
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      TGACCAGCCCTGTCTGGGTCCCAAGGCTGTGCTCACTCATGGCCTTCTTCTTCCTCACCA 360
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      CCCTCCCTGACCTTGCCATGGCCTTCCTCCTCAGCCCCAAGTGCCTCTTCGTCGTCGGCA 420
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ---------------------------------------AGTGCCTCTTTGTNGTCGGCA 21
                                                                                  

consensus_8351#0      ACCTCATCGTCGCCTTCCTCGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGCGT 480
consensus_8351#1      ----TATNGTCGCCTTCCTTGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGNAT 56
consensus_8351#2      ACCTNATNGTCGCCTTCCTNGTNGGCGAGTCTAGGCTCGCCCCGAGGGGGGAGCCGGNAT 81
                           ** *********** ** **********************************  *

consensus_8351#0      CGTCGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGATAAGCGCAA 540
consensus_8351#1      TGTTGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGACAAGCGCAA 116
consensus_8351#2      TGTNGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGCCAAGCGCAA 141
                       ** **********************************************  ********

consensus_8351#0      AGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAG 600
consensus_8351#1      AGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAG 176
consensus_8351#2      AGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTGGGGGAAG 201
                      ************************************************************

consensus_8351#0      AAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGGGGGAGGAAGAAGAGCTGCACC 660
consensus_8351#1      AAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGA---GGGGGAGGAAGAAGAGCTGCACC 233
consensus_8351#2      AAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGGGGGAGGAAGAAGAGCTGCCCC 261
                      **********************************   ******************** **

consensus_8351#0      AGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGACAAGAGCA 720
consensus_8351#1      AGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGACAAGAGCA 293
consensus_8351#2      AGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGCCAAGAGCA 321
                      *************************************************** ********

consensus_8351#0      TGTTTGACACTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAG 780
consensus_8351#1      TGTTTGACACTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAG 353
consensus_8351#2      TGTTTGCCCCTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGATTCAAAGAAG 381
                      ****** * ***************************************************

consensus_8351#0      GGATTATTGCATCCAAATTAAGGATTCTTGTGATGCTTTAGTTTTTCATCTATCATCTTA 840
consensus_8351#1      GGATTATTGCATCCAAATTAAGGATTCCTGTGATGCTTTAGTTTTTCATCTATCATCTTA 413
consensus_8351#2      GGATTATTGCATCCAAATTAAGGATTCCTGTGGGGCTTTAGTTTTTCATCTATCATTTTA 441
                      *************************** ****  ********************** ***

consensus_8351#0      GGGCCAGAGTTAAGAAGAAGAAGAGTTCACTTCACTGGCTCACTGCACTGTAGGAGATTA 900
consensus_8351#1      GGGCCAGAGTTAAGAAGAAGAAGAGTTCCCTTCACTGGCTCACTGCACTGTAGGAGATTA 473
consensus_8351#2      GGGCCAGAGTTAAGAAGAAGAAGAGTTCCCTTCCCTGGCTCCCTGCCCTGTAGGAGATTA 501
                      **************************** **** ******* **** *************

consensus_8351#0      TGCATGCACCCTTTTGATTAGAGTGTGTCTGATGATCTGATCCGGTTTAGCCATGCACAA 960
consensus_8351#1      TGCATGCACCCTTTTGATTAGAGTGTGTCTGATGATCTGATCCGGTTTAGCCATGCCCAA 533
consensus_8351#2      TGCATGCCCCCTTTTGATTAGAGGGTGTTTGATGATCTGATCCGGTTTAGCCATGCCCAA 561
                      ******* *************** **** *************************** ***

consensus_8351#0      GAATTAGGCAGAGAAAAAAAGAGAGACAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAG 1020
consensus_8351#1      GAATTAGGCAGAGAAAAAAAGAGAGCCAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAG 593
consensus_8351#2      GAATTAGGCAGAGAAAAAAAGAGAGCCAAGGAATGTGTGTGTGATCTTTTGAAAAAGCAG 621
                      ************************* **********************************

consensus_8351#0      AAAAAGAAAAGTGATGCATGTGTCTTTCTCTTATCGATCTTTGCTTTGAGCCTAATTGCA 1080
consensus_8351#1      AAAAAGAAAAGTGATGCGTGTGTCTTTCTCTTATCGATCTTTGCTTTGAGCCTAATTGCA 653
consensus_8351#2      AAAAAGAAAAGTGATGCATGTGTCTTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAA-- 679
                      ***************** *********** ***   *           *    **     

consensus_8351#0      TATGTAATGCCGCAATTATTACATCACTTATCCTGAGGAACAATGAGGCCAAGTACACTC 1140
consensus_8351#1      TATGTAATGTCGCAATTATTACCTCAAAAA----AAAAAAAAA----------------- 692
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      AACCTGATCACCTCTCAGTTGTCGGGATAACAAAGTTGCTCAACACAAACAGTGCAAGGC 1200
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      AAAAGCTTAGCATTTTTGTGATTTTTCTGAAACGTTTTCTTAAGCAGCTGGCACATAAAT 1260
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      ATGTGCCCGGTCAACTCAGTTTTCTTTTCCTTTTTGGAAGGCAGCTAGCAAAATTTGATA 1320
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      GTAATTCGATTTCCAAATTCCTGCAACTTATATTAATTGCAAATAGTTTTTTTAAAAAAA 1380
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      ACATCAGATTTTGGATCGTTCCTAATGCAAAATATTGAGATCTGCAATTTGTTTCAAGGA 1440
consensus_8351#1      ------------------------------------------------------------
consensus_8351#2      ------------------------------------------------------------
                                                                                  

consensus_8351#0      ACCTTAGATTTAATAAAACCTCTC 1464
consensus_8351#1      ------------------------
consensus_8351#2      ------------------------
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)