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Oryza sativa
cluster # 837 cluster # 837       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_837#0 length = 1272 sequences # 2  

consensusID : consensus_837#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1272
fasta sequence
                              [TTCCTCCCTAGCTGTCCGCGACTCCGCGACCGACGGCGGCGGCGGCAGATGGAGAGGAACCAGCACCGCGACGGCGACGGCGACGGTGAGGGACGCCATCATCATGTCGTCCAGGTCCCAGCGTCAGCAGTAGAAGTTGCAGCAATGGAGGAGACCTCATCAGAGGCAGCAGATCGCTCTCTGCGTCAGAAGGCAGCAGCGATGGTTGCCTCCTCCATGGAGACGTACCGGAGCAAGCCCATGTCCTTCTGGCTGCTGCTCGTCCTCAGCGCCGGCGCGATGCTCACAGCGTTCCCGGCGTCGAGCCTCCTGTCGCGGCTGTACTACAACAACGGCGGGCAGAGCAAGTGGATCCTGTCGTGGTCCGCCGTCGCCGGCTGGCCGCTGCCGGCGCTCCTCCTGCTGCCGTGCTACCTCGCCGGCAAGGCGGCGCCGACGCCGCTGTCGCCGAAGCTGTGCGCCTGGTACGCGCTGCTCGGCCTCCTGAGCGCCGCCGACAACCTCATGTACGCCTGGGCCTACGCCTACCTCCCGGCGTCCACGGCGTCGCTCGTCGCCGCGTCGTCGCTAGCGTTCTCGGCGCTGTTCGGCTGCGCCATCGCGAAGAACAGGCTGCGGCTGTCGTCGCTGAACGCCGTCGTCGTCATAACCGCCGGCGTGGTGATCATCGCGCTGGACTCCGGGTCGGACAGGTACCCCGGGATCACGGGCAGGCAGTACGCGCTGGGGCTCGTCTGGGACGTGCTCGGGTCGGCGCTCCACGGCCTCATCTTCGCGCTGTCGGAGCTGGTGTTCGTCCGGGTCCTCGGCCGGAGGTCGTTCCACGTCGTGCTGGAGCAGCAGGCGATGGTGTCGCTCTGCGCCTTCGCGTTCACCACCGTCGGGCTCGCCGTGAGCGGCGGCGGCTTCCCGGCGATGCGGCGGGAGGCGGCGGCGTTCAGGCACGGCGAGGCGTCGTACGCGATGGTGATGGTGTGGTCGGCGGTGACGTTCCAGCTCGGGGTGCTGGGGGGCACCGGCGTGCTGTTCCTGGCGTCGACCGTCCTCGCCGGCGTGCTCAACGCCGTGAGGGTGCCGGTGACGAGCATCGCGGCGGTGATCTGGTTCCATGACCCCATGAGCGGCTTCAAGATCCTGTCTCTGCTCATCACCGTATGGGGGTTCGGCTCCTACATGGTTGGCCACTCCTCTACCAAGAAAGCATCCACAAATTGATGTACTCTTATTGTTCTTCTCCTGGAACATGAAAAATATGTGAACTGAGTATGTTCT]

[+] EMBL AK059161             [TTCCTCCCTAGCTGTCCGCGACTCCGCGACCGACGGCGGCGGCGGCAGATGGAGAGGAACCAGCACCGCGACGGCGACGGCGACGGTGAGGGACGCCATCATCATGTCGTCCAGGTCCCAGCGTCAGCAGTAGAAGTTGCAGCAATGGAGGAGACCTCATCAGAGGCAGCAGATCGCTCTCTGCGTCAGAAGGCAGCAGCGATGGTTGCCTCCTCCATGGAGACGTACCGGAGCAAGCCCATGTCCTTCTGGCTGCTGCTCGTCCTCAGCGCCGGCGCGATGCTCACAGCGTTCCCGGCGTCGAGCCTCCTGTCGCGGCTGTACTACAACAACGGCGGGCAGAGCAAGTGGATCCTGTCGTGGTCCGCCGTCGCCGGCTGGCCGCTGCCGGCGCTCCTCCTGCTGCCGTGCTACCTCGCCGGCAAGGCGGCGCCGACGCCGCTGTCGCCGAAGCTGTGCGCCTGGTACGCGCTGCTCGGCCTCCTGAGCGCCGCCGACAACCTCATGTACGCCTGGGCCTACGCCTACCTCCCGGCGTCCACGGCGTCGCTCGTCGCCGCGTCGTCGCTAGCGTTCTCGGCGCTGTTCGGCTGCGCCATCGCGAAGAACAGGCTGCGGCTGTCGTCGCTGAACGCCGTCGTCGTCATAACCGCCGGCGTGGTGATCATCGCGCTGGACTCCGGGTCGGACAGGTACCCCGGGATCACGGGCAGGCAGTACGCGCTGGGGCTCGTCTGGGACGTGCTCGGGTCGGCGCTCCACGGCCTCATCTTCGCGCTGTCGGAGCTGGTGTTCGTCCGGGTCCTCGGCCGGAGGTCGTTCCACGTCGTGCTGGAGCAGCAGGCGATGGTGTCGCTCTGCGCCTTCGCGTTCACCACCGTCGGGCTCGCCGTGAGCGGCGGCGGCTTCCCGGCGATGCGGCGGGAGGCGGCGGCGTTCAGGCACGGCGAGGCGTCGTACGCGATGGTGATGGTGTGGTCGGCGGTGACGTTCCAGCTCGGGGTGCTGGGGGGCACCGGCGTGCTGTTCCTGGCGTCGACCGTCCTCGCCGGCGTGCTCAACGCCGTGAGGGTGCCGGTGACGAGCATCGCGGCGGTGATCTGGTTCCATGACCCCATGAGCGGCTTCAAGATCCTGTCTCTGCTCATCACCGTATGGGGGTTCGGCTCCTACATGGTTGGCCACTCCTCTACCAAGAAAGCATCCACAAATTGATGTACTCTTATTGTTCTTCTCCTGGAACATGAAAAATATGTGAACTGAGTATGTTCT]
[+] EMBL AK071266             [   CTCCCTAGCTGTCCGCGACTCCGCGACCGACGGCGGCGGCGGCAGATGGAGAGGAACCAGCACCGCGACGGCGACGGCGACGGTGAGGGACGCCATCATCATGTCGTCCAGGTCCCAGCGTCAGCAGTAGAAGTTGCAGCAATGGAGGAGACCTCATCAGAGGCAGCAGATCGCTCTCTGCGTCAGAAGGCAGCAGCGATGGTTGCCTCCTCCATGGAGACGTACCGGAGCAAGCCCATGTCCTTCTGGCTGCTGCTCGTCCTCAGCGCCGGCGCGATGCTCACAGCGTTCCCGGCGTCGAGCCTCCTGTCGCGGCTGTACTACAACAACGGCGGGCAGAGCAAGTGGATCCTGTCGTGGTCCGCCGTCGCCGGCTGGCCGCTGCCGGCGCTCCTCCTGCTGCCGTGCTACCTCGCCGGCAAGGCGGCGCCGACGCCGCTGTCGCCGAAGCTGTGCGCCTGGTACGCGCTGCTCGGCCTCCTGAGCGCCGCCGACAACCTCATGTACGCCTGGGCCTACGCCTACCTCCCGGCGTCCACGGCGTCGCTCGTCGCCGCGTCGTCGCTAGCGTTCTCGGCGCTGTTCGGCTGCGCCATCGCGAAGAACAGGCTGCGGCTGTCGTCGCTGAACGCCGTCGTCGTCATAACCGCCGGCGTGGTGATCATCGCGCTGGACTCCGGGTCGGACAGGTACCCCGGGATCACGGGCAGGCAGTACGCGCTGGGGCTCGTCTGGGACGTGCTCGGGTCGGCGCTCCACGGCCTCATCTTCGCGCTGTCGGAGCTGGTGTTCGTCCGGGTCCTCGGCCGGAGGTCGTTCCACGTCGTGCTGGAGCAGCAGGCGATGGTGTCGCTCTGCGCCTTCGCGTTCACCACCGTCGGGCTCGCCGTGAGCGGCGGCGGCTTCCCGGCGATGCGGCGGGAGGCGGCGGCGTTCAGGCACGGCGAGGCGTCGTACGCGATGGTGATGGTGTGGTCGGCGGTGACGTTCCAGCTCGGGGTGCTGGGGGGCACCGGCGTGCTGTTCCTGGCGTCGACCGTCCTCGCCGGCGTGCTCAACGCCGTGAGGGTGCCGGTGACGAGCATCGCGGCGGTGATCTGGTTCCATGACCCCATGAGCGGCTTCAAGATCCTGTCTCTGCTCATCACCGTATGGGGGTTCGGCTCCTACATGGTTGGCCACTCCTCTACCAAGAAAGCATCCACAAATTGATGTACTCTTATTGTTCTTCTCCTGGAACATGAAAAATATGTGAACTGAGTATGTTCT]


>consensus_837#0 TTCCTCCCTAGCTGTCCGCGACTCCGCGACCGACGGCGGCGGCGGCAGATGGAGAGGAAC CAGCACCGCGACGGCGACGGCGACGGTGAGGGACGCCATCATCATGTCGTCCAGGTCCCA GCGTCAGCAGTAGAAGTTGCAGCAATGGAGGAGACCTCATCAGAGGCAGCAGATCGCTCT CTGCGTCAGAAGGCAGCAGCGATGGTTGCCTCCTCCATGGAGACGTACCGGAGCAAGCCC ATGTCCTTCTGGCTGCTGCTCGTCCTCAGCGCCGGCGCGATGCTCACAGCGTTCCCGGCG TCGAGCCTCCTGTCGCGGCTGTACTACAACAACGGCGGGCAGAGCAAGTGGATCCTGTCG TGGTCCGCCGTCGCCGGCTGGCCGCTGCCGGCGCTCCTCCTGCTGCCGTGCTACCTCGCC GGCAAGGCGGCGCCGACGCCGCTGTCGCCGAAGCTGTGCGCCTGGTACGCGCTGCTCGGC CTCCTGAGCGCCGCCGACAACCTCATGTACGCCTGGGCCTACGCCTACCTCCCGGCGTCC ACGGCGTCGCTCGTCGCCGCGTCGTCGCTAGCGTTCTCGGCGCTGTTCGGCTGCGCCATC GCGAAGAACAGGCTGCGGCTGTCGTCGCTGAACGCCGTCGTCGTCATAACCGCCGGCGTG GTGATCATCGCGCTGGACTCCGGGTCGGACAGGTACCCCGGGATCACGGGCAGGCAGTAC GCGCTGGGGCTCGTCTGGGACGTGCTCGGGTCGGCGCTCCACGGCCTCATCTTCGCGCTG TCGGAGCTGGTGTTCGTCCGGGTCCTCGGCCGGAGGTCGTTCCACGTCGTGCTGGAGCAG CAGGCGATGGTGTCGCTCTGCGCCTTCGCGTTCACCACCGTCGGGCTCGCCGTGAGCGGC GGCGGCTTCCCGGCGATGCGGCGGGAGGCGGCGGCGTTCAGGCACGGCGAGGCGTCGTAC GCGATGGTGATGGTGTGGTCGGCGGTGACGTTCCAGCTCGGGGTGCTGGGGGGCACCGGC GTGCTGTTCCTGGCGTCGACCGTCCTCGCCGGCGTGCTCAACGCCGTGAGGGTGCCGGTG ACGAGCATCGCGGCGGTGATCTGGTTCCATGACCCCATGAGCGGCTTCAAGATCCTGTCT CTGCTCATCACCGTATGGGGGTTCGGCTCCTACATGGTTGGCCACTCCTCTACCAAGAAA GCATCCACAAATTGATGTACTCTTATTGTTCTTCTCCTGGAACATGAAAAATATGTGAAC TGAGTATGTTCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)