These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_838#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 405 fasta sequence [TTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACAAAAAAATCTCATGCTCCCATTGCATTACGAATTATTTGCTTATTCACCAAATTACATCACTGGCTAGCCCGACCCAAAAAAACTGGGCATAAATAAAATTTAAACCGCCGCCAGCACCACCATAGCGAAAAAAAATGGCCCCACAAGGGCAAACATCCCTTGGATACAAATGTTTTTTTGTTCATGACCCCACCGAAGAACCGAAACTTAGACCGAATAAACCCCTAGAGCTCAACTTGGAGTTTCAGGAATATGAAACAAGAACCCACTAAGGGGTTGCGTGTTGAAACATGCCTAATCCCCACCAAAATGGCCAACGCGGGATGACAGGATGATGCCCACCATGAACCCAT] [+] EMBL CF316712 [TTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACAAAAAAATCTCATGCTCCCATTGCATTACGAATTATTTGCTTATTCACCAAATTACATCACTGGCTAGCCCGACCCAAAAAAACTGGGCATAAATAAAATTTAAACCGCCGCCAGCACCACCATAGCGAAAAAAAATGGCCCCACAAGGGCAAACATCCCTTGGATACAAATGTTTTTTTGTTCATGACCCCACCGAAGAACCGAAACTTAGACCGAATAAACCCCTAGAGCTCAACTTGGAGTTTCAGGAATATGAAACAAGAACCCACTAAGGGGTTGCGTGTTGAAACATGCCTAATCCCCACCAAAATGGCCAACGCGGGATGACAGGATGATGCCCACCATGAACCCAT] consensusID : consensus_838#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 350 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACAAAAAAATCTCATGCCCCCATTGCATTACAAATTATTTGCTTATTCACCAAATTACATTACTGTTTAACCCAACCCAAAAAAACTGGGCCTAAATAAAAATCAAACCGCCGCCCGCCCCCCCATAACGAAAAAAAATGGGCCCCCAAGGGCAAACATCCCTTGGATACAAAAGTTTTTTTGTTCATGACCCCACCGAAAAACAGAAACTTAGACCGAATAAACCCCTAAAGCTCAACTTGGAGTTTCAGGAATATGAAACAAAAACCCCCTTAGGGTTTGGGTGTTGAAACATGCCTAATCCCCA] [+] EMBL CF314218 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACAAAAAAATCTCATGCCCCCATTGCATTACAAATTATTTGCTTATTCACCAAATTACATTACTGTTTAACCCAACCCAAAAAAACTGGGCCTAAATAAAAATCAAACCGCCGCCCGCCCCCCCATAACGAAAAAAAATGGGCCCCCAAGGGCAAACATCCCTTGGATACAAAAGTTTTTTTGTTCATGACCCCACCGAAAAACAGAAACTTAGACCGAATAAACCCCTAAAGCTCAACTTGGAGTTTCAGGAATATGAAACAAAAACCCCCTTAGGGTTTGGGTGTTGAAACATGCCTAATCCCCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_838#0 TTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACAAAAAAATC 60 consensus_838#1 ------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACAAAAAAATC 54 **** ************************************************ consensus_838#0 TCATGCTCCCATTGCATTACGAATTATTTGCTTATTCACCAAATTACATCACTGGCTAGC 120 consensus_838#1 TCATGCCCCCATTGCATTACAAATTATTTGCTTATTCACCAAATTACATTACTGTTTAAC 114 ****** ************* **************************** **** ** * consensus_838#0 CCGACCCAAAAAAACTGGGCATAAATAAAATTTAAACCGCCGCCAGCACCACCATAGCGA 180 consensus_838#1 CCAACCCAAAAAAACTGGGCCTAAATAAAAATCAAACCGCCGCCCGCCCCCCCATAACGA 174 ** ***************** ********* * *********** ** ** ***** *** consensus_838#0 AAAAAAATGGCCCCACAAGGGCAAACATCCCTTGGATACAAATGTTTTTTTGTTCATGAC 240 consensus_838#1 AAAAAAATGGGCCCCCAAGGGCAAACATCCCTTGGATACAAAAGTTTTTTTGTTCATGAC 234 ********** *** *************************** ***************** consensus_838#0 CCCACCGAAGAACCGAAACTTAGACCGAATAAACCCCTAGAGCTCAACTTGGAGTTTCAG 300 consensus_838#1 CCCACCGAAAAACAGAAACTTAGACCGAATAAACCCCTAAAGCTCAACTTGGAGTTTCAG 294 ********* *** ************************* ******************** consensus_838#0 GAATATGAAACAAGAACCCACTAAGGGGTTGCGTGTTGAAACATGCCTAATCCCCACCAA 360 consensus_838#1 GAATATGAAACAAAAACCCCCTTAGGGTTTGGGTGTTGAAACATGCCTAATCCCCA---- 350 ************* ***** ** **** *** ************************ consensus_838#0 AATGGCCAACGCGGGATGACAGGATGATGCCCACCATGAACCCAT 405 consensus_838#1 --------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||