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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8395#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1583 fasta sequence
[TCGATCTTTTACTTACCCTATCTCCCGACGATCGATCGATCGATCGATGGAGGGGAGCAGTAATAGCCCGGATAGGCAGTCGTCGGGCGGCAGCCCGCCGGAGGAGCGCGGCGGCGGGGGAAGCGGTGGAGGAAGAGGGCGGAGCGCCGCCGGCGAGCCGGTGCGGTCGCGGTGGACGCCCAAGCCGGAGCAGATACTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGAGGTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCGCGCCGCCGCCAGCGCCAGATGCAGGCGGCCGCCGCCGCCGCCGCAGCGGCGGCCTCTTCCTCTTCCCCATCCGCCAACACCTCTCCCGCAGCCGCGAGCGCCGCCACCGTGCAGGTGGGCCTCCCGCCCGGCGCCGTCGTCCACACCATGGCCATGGGTGGGAGCGCGTGCCAGTACGAGCAGCAGGCGAGCTCGTCGTCGTCGTCCGGCAGCACGGGAGGTTCGTCGCTGGGGCTGTTCGCGCACGGCGCGGGGGCCTCCGGCGCCGGCGGGTACCTGCAGGCGTCGTGCGGCGCGTCCGCGTCGGCGTCGTCGGCGCTGGCGCCCGGGCTGATGGGGGATGTGGTGGACAGCGGGGGAAGCGACGATCTCTTCGCCATCTCGAGGCAGATGGGGTTTGTGGGGAGCCCTCGCTGCTCGCCGGCCAGCTCGCCGGCGACGCCGAGCTCCGCGGCCACCGCCGCGCAGCAGCAGTTCTACTCATGCCAATTACCTGCAGCGACGATCACGGTGTTCATCAACGGAGTCCCAATGGAGATGCCGAGGGGTCCAATAGACTTGCGAGCCATGTTCGGCCAGGATGTGATGCTCGTCCACTCTACTGGGGCCCTCCTCCCAGTCAACGACTATGGAATCCTAATGCAGAGCCTCCAAATCGGAGAGAGCTACTTTCTGGTCGCTAGGCCACCTTAAAAACGAGTTCTCGATCTATCCTTGCAGTAGATAGTCAGATATATATCTCTACTCGATACTCATTGGATCAGATGCATGAGCCGGCCGGGGTGCAGCTAGTTCTCAGTTAATCATCAATCAAGAATGCTGTCTTGGATTCAAGACCTTGGAGTATGTCTAAATCGATCAATCGTCTATCGAGAACAAGACTATATATATTAGCTAGGTACGAGAAGCAAATTAATGCATGCATTGCAGCATATCGATCGGCAAAAGTACAACTACGTACTTATATATATGCCCCTTAATTAAAAACCTATGAAAGCGTGGGCGGTCGAGTTTGTTGTCCTTAGAATACAGATTACAATATGGTCGCGTCTCTTCTCATCATTTTCACAATTCCATTACAATATGCATGTATGCATGCCTGCCCTTGGCAGTCGAGCTATATATATTCTTTAATTTGTGCTAGCTATAGATGCACGTTTGTATTGTTTTTTTTTACCGTGTGATGTAATGCTATATGTGTCAGCCAAACGCGCCTGGAATGTTGGTGCTTGATTCAAGGCCG]
[+] EMBL AK063262 [TCGATCTTTTACTTACCCTATCTCCCGACGATCGATCGATCGATCGATGGAGGGGAGCAGTAATAGCCCGGATAGGCAGTCGTCGGGCGGCAGCCCGCCGGAGGAGCGCGGCGGCGGGGGAAGCGGTGGAGGAAGAGGGCGGAGCGCCGCCGGCGAGCCGGTGCGGTCGCGGTGGACGCCCAAGCCGGAGCAGATACTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGAGGTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCGCGCCGCCGCCAGCGCCAGATGCAGGCGGCCGCCGCCGCCGCCGCAGCGGCGGCCTCTTCCTCTTCCCCATCCGCCAACACCTCTCCCGCAGCCGCGAGCGCCGCCACCGTGCAGGTGGGCCTCCCGCCCGGCGCCGTCGTCCACACCATGGCCATGGGTGGGAGCGCGTGCCAGTACGAGCAGCAGGCGAGCTCGTCGTCGTCGTCCGGCAGCACGGGAGGTTCGTCGCTGGGGCTGTTCGCGCACGGCGCGGGGGCCTCCGGCGCCGGCGGGTACCTGCAGGCGTCGTGCGGCGCGTCCGCGTCGGCGTCGTCGGCGCTGGCGCCCGGGCTGATGGGGGATGTGGTGGACAGCGGGGGAAGCGACGATCTCTTCGCCATCTCGAGGCAGATGGGGTTTGTGGGGAGCCCTCGCTGCTCGCCGGCCAGCTCGCCGGCGACGCCGAGCTCCGCGGCCACCGCCGCGCAGCAGCAGTTCTACTCATGCCAATTACCTGCAGCGACGATCACGGTGTTCATCAACGGAGTCCCAATGGAGATGCCGAGGGGTCCAATAGACTTGCGAGCCATGTTCGGCCAGGATGTGATGCTCGTCCACTCTACTGGGGCCCTCCTCCCAGTCAACGACTATGGAATCCTAATGCAGAGCCTCCAAATCGGAGAGAGCTACTTTCTGGTCGCTAGGCCACCTTAAAAACGAGTTCTCGATCTATCCTTGCAGTAGATAGTCAGATATATATCTCTACTCGATACTCATTGGATCAGATGCATGAGCCGGCCGGGGTGCAGCTAGTTCTCAGTTAATCATCAATCAAGAATGCTGTCTTGGATTCAAGACCTTGGAGTATGTCTAAATCGATCAATCGTCTATCGAGAACAAGACTATATATATTAGCTAGGTACGAGAAGCAAATTAATGCATGCATTGCAGCATATCGATCGGCAAAAGTACAACTACGTACTTATATATATGCCCCTTAATTAAAAACCTATGAAAGCGTGGGCGGTCGAGTTTGTTGTCCTTAGAATACAGATTACAATATGGTCGCGTCTCTTCTCATCATTTTCACAATTCCATTACAATATGCATGTATGCATGCCTGCCCTTGGCAGTCGAGCTATATATATTCTTTAATTTGTGCTAGCTATAGATGCACGTTTGTATTGTTTTTTTTTACCGTGTGATGTAATGCTATATGTGTCAGCCAAACGCGCCTGGAATGTTGGTGCTTGATTCAAGGCCG]
consensusID : consensus_8395#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1430 fasta sequence
[TGGTTTAATTGTTGTTGCCTCCTCTCAAGCTAGCTAGCTATACTACTCCGATCCTCTCTCGCTTATTGAAACCTAGCTACTGCTTCACATGTAGCGCGTGCTGCAACTCGTGTTGTGTCACTCACACACACATCCAAGAACCAAGATTCCGAGGTAACCAACGCTCGATCTTTTACTTACCCTATCTCCCGACGATCGATCGATCGATCGATGGAGGGGAGCAGTAATAGCCCGGATAGGCAGTCGTCGGGCGGCAGCCCGCCGGAGGAGCGCGGCGGCGGGGGAAGCGGTGGAGGAGGAGGGCGGAGCGCCGCCGGCGAGCCGGTGCGGTCGCGGTGGACGCCCAAGCCGGAGCAGATACTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGAGGTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCGCGCCGCCGCCAGCGCCAGATGCAGGCGGCCGCCGCCGCCGCCGCAGCGGCGGCCTCTTCCTCTTCCCCATCCGCCAACACCTCTCCCGCAGCCGCGAGCGCCGCCACCGTGCAGGTGGGCCTCCCGCCCGGCGCCGTCGTCCACACCATGGCCATGGGTGGGAGCGCGTGCCAGTACGAGCAGCAGGCGAGCTCGTCGTCGTCGTCCGGCAGCACGGGAGGTTCGTCGCTGGGGCTGTTCGCGCACGGCGCGGGGGCCTCCGGCGCCGGCGGGTACCTGCAGGCGTCGTGCGGCGCGTCCGCGTCGGCGTCGTCGGCGCTGGCGCCCGGGCTGATGGGGGATGTGGTGGACAGCGGGGGAAGCGACGATCTCTTCGCCATCTCGAGGCAGATGGGGTTTGTGGGGAGCCCTCGCTGCTCGCCGGCCAGCTCGCCGGCGACGCCGAGCTCCGCGGCCACCGCCGCGCAGCAGCAGTTCTACTCATGCCAATTACCTGCAGCGACGATCACGGTGTTCATCAACGGAGTCCCAATGGAGATGCCGAGGGGTCCAATAGACTTGCGAGCCATGTTCGGCCAGGATGTGATGCTCGTCCACTCTACTGGGGCCCTCCTCCCAGTCAACGACTATGGAATCCTAATGCAGAGCCTCCAAATCGGAGAGAGCTACTTTCTGGTAACCATCCATCTCCAAGCTCTTACTAGCTGGTCTCATCGCTCTCTCTCTACTCCGATCAGTCAATGCAGTTTCGTCTTCATGAAAGCACCACATTTTTAGGCATGCATTCATGCTTATATATGTGTATCATGTTTGAATGTGCAAAACTAATTACTATTAATTTAATTAATTGCATGCATGTTTGTGTGAATTGTGAAATGCATAGCTAGCTATTGTTGTGATCTTCTTAATTTCCTGCTTAATGAGGA]
[+] EMBL AK111000 [TGGTTTAATTGTTGTTGCCTCCTCTCAAGCTAGCTAGCTATACTACTCCGATCCTCTCTCGCTTATTGAAACCTAGCTACTGCTTCACATGTAGCGCGTGCTGCAACTCGTGTTGTGTCACTCACACACACATCCAAGAACCAAGATTCCGAGGTAACCAACGCTCGATCTTTTACTTACCCTATCTCCCGACGATCGATCGATCGATCGATGGAGGGGAGCAGTAATAGCCCGGATAGGCAGTCGTCGGGCGGCAGCCCGCCGGAGGAGCGCGGCGGCGGGGGAAGCGGTGGAGGAGGAGGGCGGAGCGCCGCCGGCGAGCCGGTGCGGTCGCGGTGGACGCCCAAGCCGGAGCAGATACTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGAGGTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCGCGCCGCCGCCAGCGCCAGATGCAGGCGGCCGCCGCCGCCGCCGCAGCGGCGGCCTCTTCCTCTTCCCCATCCGCCAACACCTCTCCCGCAGCCGCGAGCGCCGCCACCGTGCAGGTGGGCCTCCCGCCCGGCGCCGTCGTCCACACCATGGCCATGGGTGGGAGCGCGTGCCAGTACGAGCAGCAGGCGAGCTCGTCGTCGTCGTCCGGCAGCACGGGAGGTTCGTCGCTGGGGCTGTTCGCGCACGGCGCGGGGGCCTCCGGCGCCGGCGGGTACCTGCAGGCGTCGTGCGGCGCGTCCGCGTCGGCGTCGTCGGCGCTGGCGCCCGGGCTGATGGGGGATGTGGTGGACAGCGGGGGAAGCGACGATCTCTTCGCCATCTCGAGGCAGATGGGGTTTGTGGGGAGCCCTCGCTGCTCGCCGGCCAGCTCGCCGGCGACGCCGAGCTCCGCGGCCACCGCCGCGCAGCAGCAGTTCTACTCATGCCAATTACCTGCAGCGACGATCACGGTGTTCATCAACGGAGTCCCAATGGAGATGCCGAGGGGTCCAATAGACTTGCGAGCCATGTTCGGCCAGGATGTGATGCTCGTCCACTCTACTGGGGCCCTCCTCCCAGTCAACGACTATGGAATCCTAATGCAGAGCCTCCAAATCGGAGAGAGCTACTTTCTGGTAACCATCCATCTCCAAGCTCTTACTAGCTGGTCTCATCGCTCTCTCTCTACTCCGATCAGTCAATGCAGTTTCGTCTTCATGAAAGCACCACATTTTTAGGCATGCATTCATGCTTATATATGTGTATCATGTTTGAATGTGCAAAACTAATTACTATTAATTTAATTAATTGCATGCATGTTTGTGTGAATTGTGAAATGCATAGCTAGCTATTGTTGTGATCTTCTTAATTTCCTGCTTAATGAGGA]
consensusID : consensus_8395#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1228 fasta sequence
[GAATTGCTGCTCCCTTGGGCGCATGTGTGTCACCCTCTCCTTCCATTGATCCTTTCACATCCTTTAATTTCTCTCTTTCTTCCACAACAAATCAAACTGTTCATCCTCCCCTTCACCTTTGACCTTTCCAACCTAATTAATTAGCTACTACCCAATTAGCCGATCCATCCATGGACCGCACTGCGACTGCAAGCTGGGAGGTCATGAGCCGGCGAGGTGAGCAGCAGCAGCAGCTGATGATGCAAGCTCCGGCCAGCCATAATGGTGGCAGCGGCGGCGGCGAGCCGGCGAGGTCGCGGTGGGCGCCGAAGCCGGAGCAGATCCTGATACTGGAGTCCATCTTCAACAGCGGCATGGTGAGCCCGGCCAAGGACGAGACGGCGCGCATCCGCCGCCTCCTCGAGCGCTTCGGCGCCGTCCGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCCGCTCCCGCCGCCGCGCCCGCCAGCTCCAGCAAGCCTGCGGCGCCGCCCTCCATCAGCTCCCCTCCGCCGCCGCCGCCGCCGGAGCCGGAGGAGGAGGAGATTACTATCACCACCACCACCAACCTTCGTCTTCTCCTTTCCTCATGCACGGCGGTGGCGGCGGCGGCGTGGTCACTTCGACGACCGCGGCGCCAGCGGTGGCGGCGTCCGGCCACTTCTTGGCGGACGAGGTCGACGGCGGCGGCGACGACGACCTCTTCGCCATCTCCCGGCAGATGGGCCTCATGGCTCGCCACGGCGGCGGCGACCACCATTACAGCAGCTACGCGGACAGCGACGCCACCCAGCTCAGCTACCAACCAACCGGGACGATCCAAGTGTTCATCAATGGCGTCGCATACGATGTGCCGAGCGGCGGAGCGCTGGACATGGCCGGCACGTTTGGCCGCGACGCCATGCTGGTGCACTCCTCCGGCGAGGTCCTTCCGGTGGACGAGCACGGCGTGCTCATCAACAGCTTGCAGATGGGGGAGTGCTACTACCTGGTTTCAAAATCGATCTGATTAATCGGATGGATGAAGGTGGAGAAGAAGATGCAAGATTTATGTATGCTCTTGTAAGCATGCGGGATTTGCTTCATTGATTAATTGGGAGATTGATTCCCAGCTCCATGAATTGTTGTTAATTAGGTTGTCCAGGGATCATATCAGTGTGTACTAATGTGGTTGATTTCTCTCCATCGATGTATATTATTATCTCGATGCAT]
[+] EMBL AK107305 [GAATTGCTGCTCCCTTGGGCGCATGTGTGTCACCCTCTCCTTCCATTGATCCTTTCACATCCTTTAATTTCTCTCTTTCTTCCACAACAAATCAAACTGTTCATCCTCCCCTTCACCTTTGACCTTTCCAACCTAATTAATTAGCTACTACCCAATTAGCCGATCCATCCATGGACCGCACTGCGACTGCAAGCTGGGAGGTCATGAGCCGGCGAGGTGAGCAGCAGCAGCAGCTGATGATGCAAGCTCCGGCCAGCCATAATGGTGGCAGCGGCGGCGGCGAGCCGGCGAGGTCGCGGTGGGCGCCGAAGCCGGAGCAGATCCTGATACTGGAGTCCATCTTCAACAGCGGCATGGTGAGCCCGGCCAAGGACGAGACGGCGCGCATCCGCCGCCTCCTCGAGCGCTTCGGCGCCGTCCGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCCGCTCCCGCCGCCGCGCCCGCCAGCTCCAGCAAGCCTGCGGCGCCGCCCTCCATCAGCTCCCCTCCGCCGCCGCCGCCGCCGGAGCCGGAGGAGGAGGAGATTACTATCACCACCACCACCAACCTTCGTCTTCTCCTTTCCTCATGCACGGCGGTGGCGGCGGCGGCGTGGTCACTTCGACGACCGCGGCGCCAGCGGTGGCGGCGTCCGGCCACTTCTTGGCGGACGAGGTCGACGGCGGCGGCGACGACGACCTCTTCGCCATCTCCCGGCAGATGGGCCTCATGGCTCGCCACGGCGGCGGCGACCACCATTACAGCAGCTACGCGGACAGCGACGCCACCCAGCTCAGCTACCAACCAACCGGGACGATCCAAGTGTTCATCAATGGCGTCGCATACGATGTGCCGAGCGGCGGAGCGCTGGACATGGCCGGCACGTTTGGCCGCGACGCCATGCTGGTGCACTCCTCCGGCGAGGTCCTTCCGGTGGACGAGCACGGCGTGCTCATCAACAGCTTGCAGATGGGGGAGTGCTACTACCTGGTTTCAAAATCGATCTGATTAATCGGATGGATGAAGGTGGAGAAGAAGATGCAAGATTTATGTATGCTCTTGTAAGCATGCGGGATTTGCTTCATTGATTAATTGGGAGATTGATTCCCAGCTCCATGAATTGTTGTTAATTAGGTTGTCCAGGGATCATATCAGTGTGTACTAATGTGGTTGATTTCTCTCCATCGATGTATATTATTATCTCGATGCAT]
consensusID : consensus_8395#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1204 fasta sequence
[GTCGCGGTGGACGCCGAAGCCGGAGCAGATACTCATCCTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCCCGCCGCCGCCAGCGCCAGCTGCAGGCGCAGGCGCAGGCGGCCGCGGCCGCCGCCTCGTCGGGATCTCCTCCGACTGCTTCGTCCGGTGGCCTCGCGCCTGGCCACGCCGGCTCGCCGGCTTCGTCGCTCGGGATGTTCGCGCACGGCGCCGCCGGGTACAGCTCCTCGTCGTCCTCATCGTGGCCGTCCTCGCCGCCGTCGGTGGGGATGATGATGGGGGACGTGGACTACGGGGGCGGCGGCGACGACCTGTTCGCCATCTCGAGGCAGATGGGGTACATGGACGGCGGCGGCGGCTCGTCGTCGTCGGCGGCCGCCGGTCAGCATCAGCAGCAGCAGCTCTACTACTCGTGTCAACCTGCGACGATGACGGTGTTCATCAACGGAGTGGCGACGGAGGTGCCAAGGGGACCGATCGATCTGAGATCAATGTTTGGGCAGGACGTGATGCTGGTGCATTCAACGGGTGCTCTTCTTCCAGCCAACGAGTACGGCATCCTCCTCCATTCTCTCCAGATGGGCGAGAGCTACTTCCTGGTCACGAGGTCGTCTTGATCGAGTTGAGCGATTCGTCGATTGATTGATCGATGGCAACGTACGTATTGTGTCAGCAAGATTTAGGTACCCCTTGTCCGTTGGATCAGATCGATATGCAAGCAACGCATGCTTTGCAGGTGCCGGCCGGTTAATTACGCGATCGATCGAGCTAGCAGATGATGAATGCTGCACGTACGCATGGCAATTGTCACTGCGACGAGCCTGCATATATATGAACGATCCATTGATCGTCATTCTAGCGACCAAGCAGCACGATAGTACAAGTATATACTATACAATGCAATTGCAGCGACGAACTAGTTAATTATAATACAGATAATGCATGTGTACTTCTGTGGCCATACATATATATATAGAGAGAGAGGGGATTAATTACTATATTCGTTTTTCATCTAGCTGGTCGATCTCTGTGTGTACTTGTATGTATCCCGTTCTCGATCTTTATATCAGAATATTTTATATATGTATATT]
[+] EMBL AK073232 [GTCGCGGTGGACGCCGAAGCCGGAGCAGATACTCATCCTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCCCGCCGCCGCCAGCGCCAGCTGCAGGCGCAGGCGCAGGCGGCCGCGGCCGCCGCCTCGTCGGGATCTCCTCCGACTGCTTCGTCCGGTGGCCTCGCGCCTGGCCACGCCGGCTCGCCGGCTTCGTCGCTCGGGATGTTCGCGCACGGCGCCGCCGGGTACAGCTCCTCGTCGTCCTCATCGTGGCCGTCCTCGCCGCCGTCGGTGGGGATGATGATGGGGGACGTGGACTACGGGGGCGGCGGCGACGACCTGTTCGCCATCTCGAGGCAGATGGGGTACATGGACGGCGGCGGCGGCTCGTCGTCGTCGGCGGCCGCCGGTCAGCATCAGCAGCAGCAGCTCTACTACTCGTGTCAACCTGCGACGATGACGGTGTTCATCAACGGAGTGGCGACGGAGGTGCCAAGGGGACCGATCGATCTGAGATCAATGTTTGGGCAGGACGTGATGCTGGTGCATTCAACGGGTGCTCTTCTTCCAGCCAACGAGTACGGCATCCTCCTCCATTCTCTCCAGATGGGCGAGAGCTACTTCCTGGTCACGAGGTCGTCTTGATCGAGTTGAGCGATTCGTCGATTGATTGATCGATGGCAACGTACGTATTGTGTCAGCAAGATTTAGGTACCCCTTGTCCGTTGGATCAGATCGATATGCAAGCAACGCATGCTTTGCAGGTGCCGGCCGGTTAATTACGCGATCGATCGAGCTAGCAGATGATGAATGCTGCACGTACGCATGGCAATTGTCACTGCGACGAGCCTGCATATATATGAACGATCCATTGATCGTCATTCTAGCGACCAAGCAGCACGATAGTACAAGTATATACTATACAATGCAATTGCAGCGACGAACTAGTTAATTATAATACAGATAATGCATGTGTACTTCTGTGGCCATACATATATATATAGAGAGAGAGGGGATTAATTACTATATTCGTTTTTCATCTAGCTGGTCGATCTCTGTGTGTACTTGTATGTATCCCGTTCTCGATCTTTATATCAGAATATTTTATATATGTATATT]
[+] EMBL AK063503 [GTCGCGGTGGACGCCGAAGCCGGAGCAGATACTCATCCTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCCCGCCGCCGCCAGCGCCAGCTGCAGGCGCAGGCGCAGGCGGCCGCGGCCGCCGCCTCGTCGGGATCTCCTCCGACTGCTTCGTCCGGTGGCCTCGCGCCTGGCCACGCCGGCTCGCCGGCTTCGTCGCTCGGGATGTTCGCGCACGGCGCCGCCGGGTACAGCTCCTCGTCGTCCTCATCGTGGCCGTCCTCGCCGCCGTCGGTGGGGATGATGATGGGGGACGTGGACTACGGGGGCGGCGGCGACGACCTGTTCGCCATCTCGAGGCAGATGGGGTACATGGACGGCGGCGGCGGCTCGTCGTCGTCGGCGGCCGCCGGTCAGCATCAGCAGCAGCAGCTCTACTACTCGTGTCAACCTGCGACGATGACGGTGTTCATCAACGGAGTGGCGACGGAGGTGCCAAGGGGACCGATCGATCTGAGATCAATGTTTGGGCAGGACGTGATGCTGGTGCATTCAACGGGTGCTCTTCTTCCAGCCAACGAGTACGGCATCCTCCTCCATTCTCTCCAGATGGGCGAGAGCTACTTCCTGGTCACGAGGTCGTCTTGATCGAGTTGAGCGATTCGTCGATTGATTGATCGATGGCAACGTACGTATTGTGTCAGCAAGATTTAGGTACCCCTTGTCCGTTGGATCAGATCGATATGCAAGCAACGCATGCTTTGCAGGTGCCGGCCGGTTAATTACGCGATCGATCGAGCTAGCAGATGATGAATGCTGCACGTACGCATGGCAATTGTCACTGCGACGAGCCTGCATATATATGAACGATCCATTGATCGTCATTCTAGCGACCAAGCAGCACGATAGTACAAGTATATACTATACAATGCAATTGCAGCGACGAACTAGTTAATTATAATACAGATAATGCATGTGTACTTCTGTGGCCATACATATATATATAGAGAGAGAGGGG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8395#0 ------------------------------------------------------------
consensus_8395#1 TGGTTTAATTGTTGTTGCCTCCTCTCAAGCTAGCTAGCTATACTACTCCGATCCTCTCTC 60
consensus_8395#3 ------------------------------------------------------------
consensus_8395#2 ------------------------------------------GAATTGCTGCTCCCTTGG 18
consensus_8395#0 ------------------------------------------------------------
consensus_8395#1 GCTTATTGAAACCTAGCTACTGCTTCACATGTAGCGCGTGCTGCAACTCGTGTTGTGTCA 120
consensus_8395#3 ------------------------------------------------------------
consensus_8395#2 GCGCATGTGTGTCACCCTCTCCTTCCATTGATCCTTTCACATCCTTTAATTTCTCTCTTT 78
consensus_8395#0 --------------------------------------------TCGATCT--TTTACTT 14
consensus_8395#1 CTCACACACACATCCAAGAACCAAGATTCCGAGGTAACCAACGCTCGATCT--TTTACTT 178
consensus_8395#3 ------------------------------------------------------------
consensus_8395#2 CTTCCACAACAAATCAAACTGTTCATCCTCCCCTTCACCTTTGACCTTTCCAACCTAATT 138
consensus_8395#0 ACCCTATCTCCCGACGATCGATCGATCGATCGATGGAGGGGA--GCAGTAATAGCCCGGA 72
consensus_8395#1 ACCCTATCTCCCGACGATCGATCGATCGATCGATGGAGGGGA--GCAGTAATAGCCCGGA 236
consensus_8395#3 ------------------------------------------------------------
consensus_8395#2 AATTAGCTACTACCCAATTAGCCGATCCATCCATGGACCGCACTGCGACTGCAAGCTGGG 198
consensus_8395#0 TAGGCAGTCGTCGGGCGGCAGCCCGCCGGAGGAGCGCGGCGGCGGGGGAAGCGGTGGAGG 132
consensus_8395#1 TAGGCAGTCGTCGGGCGGCAGCCCGCCGGAGGAGCGCGGCGGCGGGGGAAGCGGTGGAGG 296
consensus_8395#3 ------------------------------------------------------------
consensus_8395#2 AGGTCATGAGCCGGCGAGGTGAGCAGCAGCAGCAGCTGATGATGCAAGCTCCGGCCAGCC 258
consensus_8395#0 AAGAGGGCGG-AGCGCCGCCGGCGAGCCGGTGCGGTCGCGGTGGACGCCCAAGCCGGAGC 191
consensus_8395#1 AGGAGGGCGG-AGCGCCGCCGGCGAGCCGGTGCGGTCGCGGTGGACGCCCAAGCCGGAGC 355
consensus_8395#3 ----------------------------------GTCGCGGTGGACGCCGAAGCCGGAGC 26
consensus_8395#2 ATAATGGTGGCAGCGGCGGCGGCGAGCCGGCGAGGTCGCGGTGGGCGCCGAAGCCGGAGC 318
********** **** **********
consensus_8395#0 AGATACTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTCAACCCGCCCAAGGACGAGA 251
consensus_8395#1 AGATACTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTCAACCCGCCCAAGGACGAGA 415
consensus_8395#3 AGATACTCATCCTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGCCCAAGGACGAGA 86
consensus_8395#2 AGATCCTGATACTGGAGTCCATCTTCAACAGCGGCATGGTGAGCCCGGCCAAGGACGAGA 378
**** ** ** ***************************** * **** ************
consensus_8395#0 CCGTCCGCATCCGCAAGCTGCTCGAGAGGTTCGGCGCCGTCGGCGACGCCAACGTCTTCT 311
consensus_8395#1 CCGTCCGCATCCGCAAGCTGCTCGAGAGGTTCGGCGCCGTCGGCGACGCCAACGTCTTCT 475
consensus_8395#3 CCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCGACGCCAACGTCTTCT 146
consensus_8395#2 CGGCGCGCATCCGCCGCCTCCTCGAGCGCTTCGGCGCCGTCCGCGACGCCAACGTCTTCT 438
* * ********* ** ****** * ************ ******************
consensus_8395#0 ACTGGTTCCAGAACCGCCGCTCGCGCTCGCGCCGCCGCCAGCGCCAGATGCAGGCGGCCG 371
consensus_8395#1 ACTGGTTCCAGAACCGCCGCTCGCGCTCGCGCCGCCGCCAGCGCCAGATGCAGGCGGCCG 535
consensus_8395#3 ACTGGTTCCAGAACCGCCGCTCGCGCTCCCGCCGCCGCCAGCGCCAGCTGCAGGCG---- 202
consensus_8395#2 ACTGGTTCCAGAACCGCCGCTCCCGCTCCCGCCGCCGCGCCCGCCAGCTCCAG------- 491
********************** ***** ********* ****** * ***
consensus_8395#0 CCGCCGCCGCCGCAGCGGCGGCCTCTTCCTCTTCCCCATCCGCCAACACCTCTCCCGCAG 431
consensus_8395#1 CCGCCGCCGCCGCAGCGGCGGCCTCTTCCTCTTCCCCATCCGCCAACACCTCTCCCGCAG 595
consensus_8395#3 ------CAGGCGCAG-----------------------------------------GCGG 215
consensus_8395#2 ------------CA--------------------------------------------AG 495
** *
consensus_8395#0 CCGCGAGCGCCGCCACCGTGCAGGTGGGCCTCCCGCCCGGCGCCGTCGTCCACACCATGG 491
consensus_8395#1 CCGCGAGCGCCGCCACCGTGCAGGTGGGCCTCCCGCCCGGCGCCGTCGTCCACACCATGG 655
consensus_8395#3 CCGCGGCCGCCGCCTC-------GTCGGGATCTCCTCCGACTGCTTCGTCCG----GTGG 264
consensus_8395#2 CCTGCGGCGCCGCCCTCC-----ATCAGC-TCCCCTCCGCCGCCGCCGCCGC---CGGAG 546
** ******* * * ** * *** * * ** * *
consensus_8395#0 CCATGGGTGGGAGCGCGTGCCAGTACGAGCAGCAGGCGAGCTCGTCGTCGTCGTCCGGCA 551
consensus_8395#1 CCATGGGTGGGAGCGCGTGCCAGTACGAGCAGCAGGCGAGCTCGTCGTCGTCGTCCGGCA 715
consensus_8395#3 CCTCG--------CGCCTGGC-----------CACGCCGGCTCGCCGGC----------- 294
consensus_8395#2 CCGGAGGAGGAGGAGATTACTA----------TCACCACCACCACCAACC---------- 586
** * * * * * *
consensus_8395#0 GCACGGGAGGTTCGTCGCTGGGGCTGTTCGCGCACGGCGCGGGGGCCTCCGGCGCCGGCG 611
consensus_8395#1 GCACGGGAGGTTCGTCGCTGGGGCTGTTCGCGCACGGCGCGGGGGCCTCCGGCGCCGGCG 775
consensus_8395#3 ----------TTCGTCGCTCGGGATGTTCGCGCACGGCG---------CCGCCGGGTACA 335
consensus_8395#2 ----------TTCGTCTTCTCCTTTCCTCATGCACGGCG---------GTGGCGGCGGCG 627
****** * ** ******** * ** *
consensus_8395#0 GGTACCTGCAGGCGTCGTGCGGCGCGTCCGCGTCGGCGTCGTCGGCGCTGGCGCCCGGGC 671
consensus_8395#1 GGTACCTGCAGGCGTCGTGCGGCGCGTCCGCGTCGGCGTCGTCGGCGCTGGCGCCCGGGC 835
consensus_8395#3 GCTCCTCGTCGTCCTCATCGTGGCCGTCCTCGCCGCCGTCGGTGGGGATGA--------- 386
consensus_8395#2 G-----CGTGGTCACTTCGACGACCG-CGGCGCCAGCGGTGGCGGCGTCCGGCCAC---T 678
* * * * * ** * ** * ** * ** *
consensus_8395#0 TGATGGGGGATGTGGTGGACAGCGGGGGAAGCGACGATCTCTTCGCCATCTCGAGGCAGA 731
consensus_8395#1 TGATGGGGGATGTGGTGGACAGCGGGGGAAGCGACGATCTCTTCGCCATCTCGAGGCAGA 895
consensus_8395#3 TGATGGGGGACGTGGACTACGGGGGCGGCGGCGACGACCTGTTCGCCATCTCGAGGCAGA 446
consensus_8395#2 TCTTGGCGGACGAGGTCGACGGCGGCGGCGACGACGACCTCTTCGCCATCTCCCGGCAGA 738
* *** *** * ** ** * ** ** ****** ** *********** ******
consensus_8395#0 TGGGGTTTGTGGGGAGCCCTCGCTGCTCGCCGGCCAGCTCGCCGGCGACGCCGAGCTCCG 791
consensus_8395#1 TGGGGTTTGTGGGGAGCCCTCGCTGCTCGCCGGCCAGCTCGCCGGCGACGCCGAGCTCCG 955
consensus_8395#3 TGGGGTACATGGACGGCGGCGGCGGCTCGTCG------TCGTCGGCGGC--------CGC 492
consensus_8395#2 TGGGCCTCATGGCTCGCCACGGCGGC--GGCGACCACCATTACAGCAGC-------TACG 789
**** *** ** ** ** * ** * ** *
consensus_8395#0 CGGCCACCGCCGCGCAGCAGCAGTTCTACTCATGCCAATTACCTGCAGCGACGATCACGG 851
consensus_8395#1 CGGCCACCGCCGCGCAGCAGCAGTTCTACTCATGCCAATTACCTGCAGCGACGATCACGG 1015
consensus_8395#3 CGGTCAGCATCA-GCAGCAGCAGCTCTACTACTCGTGTCAACCT---GCGACGATGACGG 548
consensus_8395#2 CGGACAGCGACG-CCACC--CAGCTCAGCTA---CCAACCAACC---GGGACGATCCAAG 840
*** ** * * ** * *** ** ** * * * ****** *
consensus_8395#0 TGTTCATCAACGGAGTCCCAATGGAGATGCCGAGGGG---TCCAATAGACTTGCGAGCCA 908
consensus_8395#1 TGTTCATCAACGGAGTCCCAATGGAGATGCCGAGGGG---TCCAATAGACTTGCGAGCCA 1072
consensus_8395#3 TGTTCATCAACGGAGTGGCGACGGAGGTGCCAAGGGG---ACCGATCGATCTGAGATCAA 605
consensus_8395#2 TGTTCATCAATGGCGTCGCATACGATGTGCCGAGCGGCGGAGCGCTGGACATGGCCGGCA 900
********** ** ** * ** **** ** ** * * ** ** *
consensus_8395#0 TGTTCGGCCAGGATGTGATGCTCGTCCACTCTACTGGGGCCCTCCTCCCAGTCAACGACT 968
consensus_8395#1 TGTTCGGCCAGGATGTGATGCTCGTCCACTCTACTGGGGCCCTCCTCCCAGTCAACGACT 1132
consensus_8395#3 TGTTTGGGCAGGACGTGATGCTGGTGCATTCAACGGGTGCTCTTCTTCCAGCCAACGAGT 665
consensus_8395#2 CGTTTGGCCGCGACGCCATGCTGGTGCACTCCTCCGGCGAGGTCCTTCCGGTGGACGAGC 960
*** ** * ** * ***** ** ** ** * ** * * ** ** * ****
consensus_8395#0 ATGGAATCCTAATGCAGAGCCTCCAAATCGGAGAGAGCTACTTTCTGGTCGCTAGGCCAC 1028
consensus_8395#1 ATGGAATCCTAATGCAGAGCCTCCAAATCGGAGAGAGCTACTTTCTGGTAACCAT-CCAT 1191
consensus_8395#3 ACGGCATCCTCCTCCATTCTCTCCAGATGGGCGAGAGCTACTTCCTGGTCACGAGGTCGT 725
consensus_8395#2 ACGGCGTGCTCATCAACAGCTTGCAGATGGGGGAGTGCTACTACCTGGTTTCAAAATCGA 1020
* ** * ** * * * ** ** ** *** ****** ***** * * *
consensus_8395#0 CTTAAAAACGAGTTCTCGATCTATCCTTGCAGTAGATAGTCAGATATATATCTCTACTCG 1088
consensus_8395#1 CTC-----CAAGCTCTT-------------ACTAGCTGGTCTCATCGCTCTCT---CTCT 1230
consensus_8395#3 CTTGAT--CGAGTTGAGCGATT--------CGTCGATTGATTGATCGATGGCAACGTACG 775
consensus_8395#2 TCT-------GATTAATCG-----------GATGGATGAAGGTGGAGAAGAAGATGCAAG 1062
* * * *
consensus_8395#0 ATACTCATTGGATC-AGATGCATGAGCCGGCCGGGGTGCAGCTAGTTCTCAGTTAATCAT 1147
consensus_8395#1 ACTCCGATCAGTCA-ATGCAGTTTCGTCTTCATGAAAGCACCACATTTTTAGGCATGCAT 1289
consensus_8395#3 TATTGTGTCAGCAAGATTTAGGTACCCCTTGTCCGTTGGATCAGATCGATATGCAAGCAA 835
consensus_8395#2 ATTTATGTATGCTC-TTGTAAGCATGCGGGATTTGCTTCATTGATTAATTGGGAGATTGA 1121
* * * *
consensus_8395#0 CAATCAAGAATGCTGTCTTGGATTCAAGACCTTGGAGTATGT--CTAAATCGATCAATCG 1205
consensus_8395#1 TCAT-------GCTTATATATGTGTATCATGTTTGAATGTG---CAAAACTAATTA---- 1335
consensus_8395#3 CGCA------TGCTT-TGCAGGTGCCGGCCGGTTAATTACGCGATCGATCGAGCTAGCAG 888
consensus_8395#2 TTCCCA-----GCTC-CATGAATTGTTGTTAATTAGGTTGTCCAGGGATCATATCAGT-G 1174
*** * * * * *
consensus_8395#0 TCTATCGAGAACAAGACTATATATATTAGCTA--GGTACGAGAAGCAAATTAATGCATGC 1263
consensus_8395#1 -CTATTAAT----------------TTAATTA--ATTGC---ATGCATGTT--TGTGTGA 1371
consensus_8395#3 ATGATGAATGCTGCACGTACGCATGGCAATTGTCACTGCGACGAGCCTGCATATATATGA 948
consensus_8395#2 TGTACTAAT----------------GTGGTTG--ATTTCTCTCCATCGATGTATATTATT 1216
* * * * * *
consensus_8395#0 ATTGCAGCATATCGATCGGCAAAAGTACAACTACGTACTTATATATATGCCCCTTAATTA 1323
consensus_8395#1 ATTGTGAAATGCATAGCT----AGCTATTGTTGTGATCTTCTTAATTTCCTGCTTAATGA 1427
consensus_8395#3 A---CGATCCATTGATCGTCATTCTAGCGACCAAGCAGCACGATAGTACAAGTATATACT 1005
consensus_8395#2 ATCTCGATGCAT------------------------------------------------ 1228
*
consensus_8395#0 AAAACCTATGAAAGCGTGGGCGGTCGAGTTTGTTGTCCTTAGAATACAGATTACAATATG 1383
consensus_8395#1 GGA--------------------------------------------------------- 1430
consensus_8395#3 ATACAATGCAATTGCAGCGACGAACTAGTTAATTATAATACAGATAATGCATGTG-TACT 1064
consensus_8395#2 ------------------------------------------------------------
consensus_8395#0 GTCGCGTCTCTTCTCATCATTTTCACAATTCCATTACAATATGCATGTATGCATGCCTGC 1443
consensus_8395#1 ------------------------------------------------------------
consensus_8395#3 TCTGTGGCCATACATATATATATAGAGAGAGAGGGGATTAATTACTATATTCGTTTTTCA 1124
consensus_8395#2 ------------------------------------------------------------
consensus_8395#0 CCTTGGCAGTCGAGCTATATATATTCTTTAATTTGTGCTAGCTATAGATGCACGTTTGTA 1503
consensus_8395#1 ------------------------------------------------------------
consensus_8395#3 TCTAGCTGGTCGATCTCTGTGTGTACTTGTATGTATCCCGTTCTCGATCTTTATATCAGA 1184
consensus_8395#2 ------------------------------------------------------------
consensus_8395#0 TTGTTTTTTTTTACCGTGTGATGTAATGCTATATGTGTCAGCCAAACGCGCCTGGAATGT 1563
consensus_8395#1 ------------------------------------------------------------
consensus_8395#3 ATATTTTATATATGTATATT---------------------------------------- 1204
consensus_8395#2 ------------------------------------------------------------
consensus_8395#0 TGGTGCTTGATTCAAGGCCG 1583
consensus_8395#1 --------------------
consensus_8395#3 --------------------
consensus_8395#2 --------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||