These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8400#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1751 fasta sequence [ACGATTTTGCTATCCCGCAGTCCGCGCGCGCACCCGTTTCCTCCAACGACTGATCTGCTGCGAGAAGCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATG-TTCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTA-CCCGTC-TGCGGCCAGCGACC-TAGCGATCTACC-TCCAGGTTCCGCATGTCGCCCGCTCGGCTCCATCCTCTTTCAAGGACATGGCCGACACGGTGCTGAGCTTCTCCGGCGTGCCGACGATTCGCGCGCTGGACATGCCGGACACCATGCAAGACAGGGAGAGCGACGTGGGCACGACCCGGATTCACCACTGCTCCCGGATGGCTGAAGCGAGAGGCATTCTGGTGAACAGCTTCGATTGGTTGGAGACGAGGGCCCTGAAAGCGATCCGCGGCGGCCTCTGCCTGCCGTCCGGCCGCTCGGTGCCCGCGATCTACTGCGTTGGGCCGCTGGTCGATGGGGGCAAGCTCAAGGAGAACGACGCGCGGCACGAGTGCCTCGAGTGGCTGGACCGCCAACCGAAGCAGAGCGTGGTGTTCCTCTGCTTCGGGAGCAGGGGCACTTTCTCGGTGTCGCAGCTGAGCGAGATGGCTCGGGGGATAGAGAACTCCGGACACAGATTCCTGTGGGCTGTGCGTAGCAACCTCGGCGAGGTGGACTTGGAGGCGTTGTTTCCGGAAGGGTTCTTGGAGAGGACCCAAGGCAGGGGATTCGTCGTGAAGAACTGGGCGCCGCAGTCGGCGGTGCTGCAGCACGGCGCCGTCGGCGCGTTCGTGACGCACTGCGGGTGGAACTCGTCGCTGGAGGCGATCATGTCCGGCGTGCCGATGATCTGCTGGCCGCTGTACGCGGAGCAGAGGCTGAACAAAGCGCACCTGGTGGAGGAGATGAAGCTTGGGGTGTTGGTGGAGGGCTACGACGGCGAGCTTGTTAAGGCCGACGAGCTGGAGACCAAGGTTCGGCTGGTGATGGAGTCGGAGGAAGGGAAGAGGCTTAGGGAGAGGTCGGCGATGGCCAAGGAGATGGCTGCTGATGCCGTCAAAGATGGGGGTTCGTCTGACATGGCGTTCGCCGAATTCCTGAACAATTTGGGGACGAACAACGTGAAAAGCGGCCCGAGAGATACACCCGTGCATGACTGAAACACTGTAGCCGAGTTGGTTTTAGCAGGACCGAGAATAATGTTCTTCAGTATATTTAGATTTCGTCAGATTTTAGAGTTGTTCATGTCGTGATGTGGCCGAATCTGTATGAGACTACGGTGCAACTATGCTAGCGCATCTCATGCAAAGTCCGGGCATCCTTACAGAGAACACACTAATTTATTTCCCAGTTTTTTCTCCCTCATGCAACTATACTTTAGGTTGATACTTGAGAATTTGAACTTTGAAGCA] [+] EMBL AK103355 [ACGATTTTGCTATCCCGCAGTCCGCGCGCGCACCCGTTTCCTCCAACGACTGATCTGCTGCGAGAAGCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATG TTCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTA CCCGTC TGCGGCCAGCGACC TAGCGATCTACC TCCAGGTTCCGCATGTCGCCCGCTCGGCTCCATCCTCTTTCAAGGACATGGCCGACACGGTGCTGAGCTTCTCCGGCGTGCCGACGATTCGCGCGCTGGACATGCCGGACACCATGCAAGACAGGGAGAGCGACGTGGGCACGACCCGGATTCACCACTGCTCCCGGATGGCTGAAGCGAGAGGCATTCTGGTGAACAGCTTCGATTGGTTGGAGACGAGGGCCCTGAAAGCGATCCGCGGCGGCCTCTGCCTGCCGTCCGGCCGCTCGGTGCCCGCGATCTACTGCGTTGGGCCGCTGGTCGATGGGGGCAAGCTCAAGGAGAACGACGCGCGGCACGAGTGCCTCGAGTGGCTGGACCGCCAACCGAAGCAGAGCGTGGTGTTCCTCTGCTTCGGGAGCAGGGGCACTTTCTCGGTGTCGCAGCTGAGCGAGATGGCTCGGGGGATAGAGAACTCCGGACACAGATTCCTGTGGGCTGTGCGTAGCAACCTCGGCGAGGTGGACTTGGAGGCGTTGTTTCCGGAAGGGTTCTTGGAGAGGACCCAAGGCAGGGGATTCGTCGTGAAGAACTGGGCGCCGCAGTCGGCGGTGCTGCAGCACGGCGCCGTCGGCGCGTTCGTGACGCACTGCGGGTGGAACTCGTCGCTGGAGGCGATCATGTCCGGCGTGCCGATGATCTGCTGGCCGCTGTACGCGGAGCAGAGGCTGAACAAAGCGCACCTGGTGGAGGAGATGAAGCTTGGGGTGTTGGTGGAGGGCTACGACGGCGAGCTTGTTAAGGCCGACGAGCTGGAGACCAAGGTTCGGCTGGTGATGGAGTCGGAGGAAGGGAAGAGGCTTAGGGAGAGGTCGGCGATGGCCAAGGAGATGGCTGCTGATGCCGTCAAAGATGGGGGTTCGTCTGACATGGCGTTCGCCGAATTCCTGAACAATTTGGGGACGAACAACGTGAAAAGCGGCCCGAGAGATACACCCGTGCATGACTGAAACACTGTAGCCGAGTTGGTTTTAGCAGGACCGAGAATAATGTTCTTCAGTATATTTAGATTTCGTCAGATTTTAGAGTTGTTCATGTCGTGATGTGGCCGAATCTGTATGAGACTACGGTGCAACTATGCTAGCGCATCTCATGCAAAGTCCGGGCATCCTTACAGAGAACACACTAATTTATTTCCCA ] [+] EMBL AK064298 [ TCTGCTGCGAGAAGCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATG TTCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTA CCCGTC TGCGGCCAGCGACC TAGCGATCTACC TCCAGGTTCCGCATGTCGCCCGCTCGGCTCCATCCTCTTTCAAGGACATGGCCGACACGGTGCTGAGCTTCTCCGGCGTGCCGACGATTCGCGCGCTGGACATGCCGGACACCATGCAAGACAGGGAGAGCGACGTGGGCACGACCCGGATTCACCACTGCTCCCGGATGGCTGAAGCGAGAGGCATTCTGGTGAACAGCTTCGATTGGTTGGAGACGAGGGCCCTGAAAGCGATCCGCGGCGGCCTCTGCCTGCCGTCCGGCCGCTCGGTGCCCGCGATCTACTGCGTTGGGCCGCTGGTCGATGGGGGCAAGCTCAAGGAGAACGACGCGCGGCACGAGTGCCTCGAGTGGCTGGACCGCCAACCGAAGCAGAGCGTGGTGTTCCTCTGCTTCGGGAGCAGGGGCACTTTCTCGGTGTCGCAGCTGAGCGAGATGGCTCGGGGGATAGAGAACTCCGGACACAGATTCCTGTGGGCTGTGCGTAGCAACCTCGGCGAGGTGGACTTGGAGGCGTTGTTTCCGGAAGGGTTCTTGGAGAGGACCCAAGGCAGGGGATTCGTCGTGAAGAACTGGGCGCCGCAGTCGGCGGTGCTGCAGCACGGCGCCGTCGGCGCGTTCGTGACGCACTGCGGGTGGAACTCGTCGCTGGAGGCGATCATGTCCGGCGTGCCGATGATCTGCTGGCCGCTGTACGCGGAGCAGAGGCTGAACAAAGCGCACCTGGTGGAGGAGATGAAGCTTGGGGTGTTGGTGGAGGGCTACGACGGCGAGCTTGTTAAGGCCGACGAGCTGGAGACCAAGGTTCGGCTGGTGATGGAGTCGGAGGAAGGGAAGAGGCTTAGGGAGAGGTCGGCGATGGCCAAGGAGATGGCTGCTGATGCCGTCAAAGATGGGGGTTCGTCTGACATGGCGTTCGCCGAATTCCTGAACAATTTGGGGACGAACAACGTGAAAAGCGGCCCGAGAGATACACCCGTGCATGACTGAAACACTGTAGCCGAGTTGGTTTTAGCAGGACCGAGAATAATGTTCTTCAGTATATTTAGATTTCGTCAGATTTTAGAGTTGTTCATGTCGTGATGTGGCCGAATCTGTATGAGACTACGGTGCAACTATGCTAGCGCATCTCATGCAAAGTCCGGGCATCCTTACAGAGAACACACTAATTTATTTCCCAGTTTTTTCTCCCTCATGCAACTATACTTTAGGTTGATACTTGAGAATTTGAACTTTGAAGCA] [+] EMBL AK099365 [ GCGAGAAGCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATG TTCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTA CCCGTC TGCGGCCAGCGACC TAGCGATCTACC TCCAGGTTCCGCATGTCGCCCGCTCGGCTCCATCCTCTTTCAAGGACATGGCCGACACGGTGCTGAGCTTCTCCGGCGTGCCGACGATTCGCGCGCTGGACATGCCGGACACCATGCAAGACAGGGAGAGCGACGTGGGCACGACCCGGATTCACCACTGCTCCCGGATGGCTGAAGCGAGAGGCATTCTGGTGAACAGCTTCGATTGGTTGGAGACGAGGGCCCTGAAAGCGATCCGCGGCGGCCTCTGCCTGCCGTCCGGCCGCTCGGTGCCCGCGATCTACTGCGTTGGGCCGCTGGTCGATGGGGGCAAGCTCAAGGAGAACGACGCGCGGCACGAGTGCCTCGAGTGGCTGGACCGCCAACCGAAGCAGAGCGTGGTGTTCCTCTGCTTCGGGAGCAGGGGCACTTTCTCGGTGTCGCAGCTGAGCGAGATGGCTCGGGGGATAGAGAACTCCGGACACAGATTCCTGTGGGCTGTGCGTAGCAACCTCGGCGAGGTGGACTTGGAGGCGTTGTTTCCGGAAGGGTTCTTGGAGAGGACCCAAGGCAGGGGATTCGTCGTGAAGAACTGGGCGCCGCAGTCGGCGGTGCTGCAGCACGGCGCCGTCGGCGCGTTCGTGACGCACTGCGGGTGGAACTCGTCGCTGGAGGCGATCATGTCCGGCGTGCCGATGATCTGCTGGCCGCTGTACGCGGAGCAGAGGCTGAACAAAGCGCACCTGGTGGAGGAGATGAAGCTTGGGGTGTTGGTGGAGGGCTACGACGGCGAGCTTGTTAAGGCCGACGAGCTGGAGACCAAGGTTCGGCTGGTGATGGAGTCGGAGGAAGGGAAGAGGCTTAGGGAGAGGTCGGCGATGGCCAAGGAGATGGCTGCTGATGCCGTCAAAGATGGGGGTTCGTCTGACATGGCGTTCGCCGAATTCCTGAACAATTTGGGGACGAACAACGTGAAAAGCGGCCCGAGAGATACACCCGTGCATGACTGAAACACTGTAGCCGAGTTGGTTTTAGCAGGACCGAGAATAATGTTCTTCAGTATATTTAGATTTCGTCAGATTTTAGAGTTGTTCATGTCGTGATGTGGCCGAATCTGTATGAGACTACGGTGCAACTATGCTAGCGCATCTCATGCAAAGTCCGGGCATCCTTACAGAGAACACACTAATTTATTTCCCAGT ] [+] EMBL AU181667 [ GCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCG CTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATGTTTCTGCATCGACGCGCTCGACGTNGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTACCCCGTCTTGCNGCCAGCGACCTTAGCGATCTACCTTCCAGGT ] [+] EMBL AU173785 [ CGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATG TTCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTA CCCGTC TGCGGCCAGCGACC TAGCGATCTACC TCCAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||