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Oryza sativa
cluster # 8405 cluster # 8405       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8405#0 length = 1990 sequences # 3  
consensus_8405#1 length = 659 sequences # 1  
consensus_8405#2 length = 523 sequences # 1  

consensusID : consensus_8405#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1990
fasta sequence
                              [GGGCATCCGCCGTCACCGCGCCGACCGAGCCCGAGACCACGGCGAGGGAGGCCCCGTCCCGCCACGAGCTCCTCCTCGAGCGCCTCCGGCAGCGCCACCTCAAGGGCGTGCCCGCTGCTACCCCGAGGCCGGCGCAGCGGGAGAAGGGGAGGGGCGGCGGCGGCGGTGGCGCGCAGGAGCTGCAGCAGAAGAGGAGGGTCGAGGTGGTGGATAGTTTCGAGGAGCTCGGGCTCGGGGAGGAGGTGATGGCCGCGCTCGGGGAGATGGGTATCTCCAAGCCCACCGAGATCCAGTGCGTTGGTGTGCCCGCCGTGCTGGCTGGCACCAGTGTTGTGCTTGGCTCGCACACCGGTTCCGGGAAGACGCTCGCCTACCTGCTCCCGCTTGTTCAGCTACTGCGTCGTGATGAAGCAATGTTGGGAATGTCAATGAAACCAAGGAGGCCAAGAGCAGTAGTTCTCTGCCCCACAAGGGAGCTGACTGAGCAGGTCTTCCGTGTCGCAAAGTCCATAAGCCATCACGCACGTTTTCGGTCAACAATGGTTAGTGGAGGCAGCCGTATAAGGCCCCAGGAAGATTCTCTGAACATGCCTGTAGACATGGTTGTTGGGACTCCTGGGAGGATTCTTGATCATATCAAGGATGGAAACATGGTTTATGGTGATATCAAGTATCTGGTCCTTGATGAGGCAGATACGATGTTTGATCAAGGTTTTGGACCAGACATTAGGAAGTTTCTTGCTCCTTTGAAGAATCGTGCTGCAAAACCTGGCGATCAGGGGTTCCAAACTGTATTAGTTACTGCTACTATGACCAAGGCAGTACAAAAGCTGATAGGTGAGGAATTTGAAGGTATTGTTCATTTACGGACAACAACCTTTCAAAAAAGAGTTGCAACTGCACGGCATGACTTCATCAAACTGTCTGGTTCAGAAAACAAACTAGAGGCTCTTCTGCAGGTTCTTGAGCCAAGTTTAGCAAAGGGAAATAAAGTTATGGTGTTCTGCAATACTTTGAATTCAAGTCGTGCCGTGGACCATTTTCTGACTGAAAATCAGATATCTACTGTAAACTACCATGGGGAAGTTCCTGCTGAAGAGAGGGTTGAGAACCTGAACAAGTTCCGGAATGAAGAAGGGGATTGCCCAACACTGGTCTGCACTGACCTAGCAGCTCGAGGCCTAGACTTGGATGTTGACCATGTCATCATGTTTGACTTCCCATCAAACTCTATTGATTACCTCCATAGAACTGGAAGAACAGCACGCATGGGAGCCAAAGGGAAAGTTACAAGCCTTGTTGCGAAGAAAGATGTGACTTTAGCAACACGGATAGAAGAGGCTATGAAGAAAAACGAGAGCTTAGAGGCACTGACGACTAATAACGTCAGAAGGGCGGCCGTCAACCCACAGTACACTAGTACCAAAGGACGACCAAGCGCTCTAAAGGTAGTAAACCAG-AAGGGTAGAAGGGGAGTTGCACTGC-AGACCAAGTCATCAAGGATTGTCAAGGACACAACTTCATCCAGAAGGCGCTCGCCAATTAGGAGTCAACCAAGGTCGAAATCGACATCTTCAGGAAAAGCAAAACCAGTGCGATCTGCTAAGCCGAGCAAGAGTAGCAGCCCTAGCCCCAAGGTTGCAAAGAGCCGACCGAGACCAGAGGGTCGGAAAGGGGATGCTCTGAACAAGCTGGGTAGTAAGCTCAGTGTGGTTGGATTCAGAGGCCGCAGCTCAGGGAAATCGGCACAAGCATCATAGTGAGGCCTCGAGAATTTTGGGTAGTGAAATTCAACTTTTTGTAAATATCTGTGACTTGTTTCGGCCGTTTTCCCTGCAGGCTTGCAAGACCCTAATTGAGACGCCCCTTCTAAAAGAAAACGTAGAACACTGAAATCTTACCACAGTAC-GTACATCTATCTGTTTACATTGTTGAACAATAATATCATCTGTTTCACTGTCCATGAATAAACACGAAGTGCATAAAAAAA]

[+] EMBL AK060699             [GGGCATCCGCCGTCACCGCGCCGACCGAGCCCGAGACCACGGCGAGGGAGGCCCCGTCCCGCCACGAGCTCCTCCTCGAGCGCCTCCGGCAGCGCCACCTCAAGGGCGTGCCCGCTGCTACCCCGAGGCCGGCGCAGCGGGAGAAGGGGAGGGGCGGCGGCGGCGGTGGCGCGCAGGAGCTGCAGCAGAAGAGGAGGGTCGAGGTGGTGGATAGTTTCGAGGAGCTCGGGCTCGGGGAGGAGGTGATGGCCGCGCTCGGGGAGATGGGTATCTCCAAGCCCACCGAGATCCAGTGCGTTGGTGTGCCCGCCGTGCTGGCTGGCACCAGTGTTGTGCTTGGCTCGCACACCGGTTCCGGGAAGACGCTCGCCTACCTGCTCCCGCTTGTTCAGCTACTGCGTCGTGATGAAGCAATGTTGGGAATGTCAATGAAACCAAGGAGGCCAAGAGCAGTAGTTCTCTGCCCCACAAGGGAGCTGACTGAGCAGGTCTTCCGTGTCGCAAAGTCCATAAGCCATCACGCACGTTTTCGGTCAACAATGGTTAGTGGAGGCAGCCGTATAAGGCCCCAGGAAGATTCTCTGAACATGCCTGTAGACATGGTTGTTGGGACTCCTGGGAGGATTCTTGATCATATCAAGGATGGAAACATGGTTTATGGTGATATCAAGTATCTGGTCCTTGATGAGGCAGATACGATGTTTGATCAAGGTTTTGGACCAGACATTAGGAAGTTTCTTGCTCCTTTGAAGAATCGTGCTGCAAAACCTGGCGATCAGGGGTTCCAAACTGTATTAGTTACTGCTACTATGACCAAGGCAGTACAAAAGCTGATAGGTGAGGAATTTGAAGGTATTGTTCATTTACGGACAACAACCTTTCAAAAAAGAGTTGCAACTGCACGGCATGACTTCATCAAACTGTCTGGTTCAGAAAACAAACTAGAGGCTCTTCTGCAGGTTCTTGAGCCAAGTTTAGCAAAGGGAAATAAAGTTATGGTGTTCTGCAATACTTTGAATTCAAGTCGTGCCGTGGACCATTTTCTGACTGAAAATCAGATATCTACTGTAAACTACCATGGGGAAGTTCCTGCTGAAGAGAGGGTTGAGAACCTGAACAAGTTCCGGAATGAAGAAGGGGATTGCCCAACACTGGTCTGCACTGACCTAGCAGCTCGAGGCCTAGACTTGGATGTTGACCATGTCATCATGTTTGACTTCCCATCAAACTCTATTGATTACCTCCATAGAACTGGAAGAACAGCACGCATGGGAGCCAAAGGGAAAGTTACAAGCCTTGTTGCGAAGAAAGATGTGACTTTAGCAACACGGATAGAAGAGGCTATGAAGAAAAACGAGAGCTTAGAGGCACTGACGACTAATAACGTCAGAAGGGCGGCCGTCAACCCACAGTACACTAGTACCAAAGGACGACCAAGCGCTCTAAAGGTAGTAAACCAG AAGGGTAGAAGGGGAGTTGCACTGC AGACCAAGTCATCAAGGATTGTCAAGGACACAACTTCATCCAGAAGGCGCTCGCCAATTAGGAGTCAACCAAGGTCGAAATCGACATCTTCAGGAAAAGCAAAACCAGTGCGATCTGCTAAGCCGAGCAAGAGTAGCAGCCCTAGCCCCAAGGTTGCAAAGAGCCGACCGAGACCAGAGGGTCGGAAAGGGGATGCTCTGAACAAGCTGGGTAGTAAGCTCAGTGTGGTTGGATTCAGAGGCCGCAGCTCAGGGAAATCGGCACAAGCATCATAGTGAGGCCTCGAGAATTTTGGGTAGTGAAATTCAACTTTTTGTAAATATCTGTGACTTGTTTCGGCCGTTTTCCCTGCAGGCTTGCAAGACCCTAATTGAGACGCCCCTTCTAAAAGAAAACGTAGAACACTGAAATCTTACCACAGTAC GTACATCTATCTGTTTACATTGTTGAACAATAATATCATCTGTTTCACT                                ]
[+] EMBL C25847               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACTGACCTAGCAGCTCGAGGCCTAGACTTGGATGTTGACCATGTCATCATGTTTGACTTCCCATCAAACTCTATTGATTACCTCCATAGAACTGGAAGAACAGCACGCATGGGAGCCAAAGGGAAAGTTACAAGCCTTGTTGCGAAGAAAGATGTGACTTTAGCAACACGGATAGAAGAGGCTATGAAGAAAAACGAGAGCTTAGAGGCACTGACGACTAATAACGTCAGAAGGGCGGCCGTCAACCCACAGTACACTAGTACCAAAGGACGACCAAGCGCTCTAAAGGTAGTAAACCAGNAAGGGTAGAAGGGGAGTTGCACTGCAAGACCANGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU166347             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACATCTTCAGGAAAAGCAAAACCAGTGCGATCTGCTAAGCCGAGCAAGAGTAGCAGCCCTAGCCCCAAGGTTGCAAAGAGCCGACCGAGACCAGAGGGTCGGAAAGGGGATGCTCTGAACAAGCTGGGTAGTAAGCTCAGTGTGGTTGGATTCAGAGGCCGCAGCTCAGGGAAATCGGCACAAGCATCATAGTGAGGCCTCGAGAATTTTGGGTAGTGAAATTCAACTTTTTGTAAATATCTGTGACTTGTTTCGGCCGTTTTCCCTGCAGGCTTGCAAGACCCTAATTGANACGCCCCTTNTAAAAGAAAACGTAGAACACTGAAATCTTACCACAGTACGGTACATCTATCTGTTTACATTGTTGAACAATAATATCATCTGTTTCACTGTCCATGAATAAACACGAAGTGCATAAAAAAA]


>consensus_8405#0 GGGCATCCGCCGTCACCGCGCCGACCGAGCCCGAGACCACGGCGAGGGAGGCCCCGTCCC GCCACGAGCTCCTCCTCGAGCGCCTCCGGCAGCGCCACCTCAAGGGCGTGCCCGCTGCTA CCCCGAGGCCGGCGCAGCGGGAGAAGGGGAGGGGCGGCGGCGGCGGTGGCGCGCAGGAGC TGCAGCAGAAGAGGAGGGTCGAGGTGGTGGATAGTTTCGAGGAGCTCGGGCTCGGGGAGG AGGTGATGGCCGCGCTCGGGGAGATGGGTATCTCCAAGCCCACCGAGATCCAGTGCGTTG GTGTGCCCGCCGTGCTGGCTGGCACCAGTGTTGTGCTTGGCTCGCACACCGGTTCCGGGA AGACGCTCGCCTACCTGCTCCCGCTTGTTCAGCTACTGCGTCGTGATGAAGCAATGTTGG GAATGTCAATGAAACCAAGGAGGCCAAGAGCAGTAGTTCTCTGCCCCACAAGGGAGCTGA CTGAGCAGGTCTTCCGTGTCGCAAAGTCCATAAGCCATCACGCACGTTTTCGGTCAACAA TGGTTAGTGGAGGCAGCCGTATAAGGCCCCAGGAAGATTCTCTGAACATGCCTGTAGACA TGGTTGTTGGGACTCCTGGGAGGATTCTTGATCATATCAAGGATGGAAACATGGTTTATG GTGATATCAAGTATCTGGTCCTTGATGAGGCAGATACGATGTTTGATCAAGGTTTTGGAC CAGACATTAGGAAGTTTCTTGCTCCTTTGAAGAATCGTGCTGCAAAACCTGGCGATCAGG GGTTCCAAACTGTATTAGTTACTGCTACTATGACCAAGGCAGTACAAAAGCTGATAGGTG AGGAATTTGAAGGTATTGTTCATTTACGGACAACAACCTTTCAAAAAAGAGTTGCAACTG CACGGCATGACTTCATCAAACTGTCTGGTTCAGAAAACAAACTAGAGGCTCTTCTGCAGG TTCTTGAGCCAAGTTTAGCAAAGGGAAATAAAGTTATGGTGTTCTGCAATACTTTGAATT CAAGTCGTGCCGTGGACCATTTTCTGACTGAAAATCAGATATCTACTGTAAACTACCATG GGGAAGTTCCTGCTGAAGAGAGGGTTGAGAACCTGAACAAGTTCCGGAATGAAGAAGGGG ATTGCCCAACACTGGTCTGCACTGACCTAGCAGCTCGAGGCCTAGACTTGGATGTTGACC ATGTCATCATGTTTGACTTCCCATCAAACTCTATTGATTACCTCCATAGAACTGGAAGAA CAGCACGCATGGGAGCCAAAGGGAAAGTTACAAGCCTTGTTGCGAAGAAAGATGTGACTT TAGCAACACGGATAGAAGAGGCTATGAAGAAAAACGAGAGCTTAGAGGCACTGACGACTA ATAACGTCAGAAGGGCGGCCGTCAACCCACAGTACACTAGTACCAAAGGACGACCAAGCG CTCTAAAGGTAGTAAACCAGAAGGGTAGAAGGGGAGTTGCACTGCAGACCAAGTCATCAA GGATTGTCAAGGACACAACTTCATCCAGAAGGCGCTCGCCAATTAGGAGTCAACCAAGGT CGAAATCGACATCTTCAGGAAAAGCAAAACCAGTGCGATCTGCTAAGCCGAGCAAGAGTA GCAGCCCTAGCCCCAAGGTTGCAAAGAGCCGACCGAGACCAGAGGGTCGGAAAGGGGATG CTCTGAACAAGCTGGGTAGTAAGCTCAGTGTGGTTGGATTCAGAGGCCGCAGCTCAGGGA AATCGGCACAAGCATCATAGTGAGGCCTCGAGAATTTTGGGTAGTGAAATTCAACTTTTT GTAAATATCTGTGACTTGTTTCGGCCGTTTTCCCTGCAGGCTTGCAAGACCCTAATTGAG ACGCCCCTTCTAAAAGAAAACGTAGAACACTGAAATCTTACCACAGTACGTACATCTATC TGTTTACATTGTTGAACAATAATATCATCTGTTTCACTGTCCATGAATAAACACGAAGTG CATAAAAAAA



consensusID : consensus_8405#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 659
fasta sequence
                              [AAACAAAACCCGCCACCTCTAAACCCTCGCCCTCCTCCTCCTCCCATGGCGATGGCCGGCGCCGCCGGGCGGTGCCTCATGCTGACCCGCCCGTCCCCTCTCCTCCGCCTCCGCCTCCTCCGCGCCGCCCTCACGACCACCACCACGGCGGCGGGGGCATCCGCTTCCCCCGCCGCAGTCACCGCGCCGACCGAGCCCGACGCGGCGAGGGAGGCCCCGTCCCGCCACGAGCTCCTCCTCGAGCGCCTCCGGCAGCGCCACCTCAAGGGCGTGCCCGCTGCTACCCCGAGGCCGGCGCAGCGGGAGAAGGGGAGGGGCGGCGGAGGCGCGCAGGAGCTGCAGCAGAAGAGGAGGGTCGAGGTGGTGGAAAGCTTCGAGGAGCTCGGGCTCGGGGAGGAGGTGATGGCCGCGCTCGGGGAGATGGGTATCTCCAAGCCCACCGAGATCCAGTGCGTTGGTGTGCCCGCCGGGCTGGCTGGTACAGCGTTGGGCTCGGTCGCACACCGGCTCCCGGAAGACGCTTGCCTACCTGATGCCGGCGTTAAGTACTGGTTTGAGAAGAAGCCCCGGCCCGCAAAGCCAAGTGAAGCCGCGCGGGCACGAGCGATTGATTTCCGCCCGCACACGGGAGCAGCCATGTAGATGGCCTCGCGGCCAAA]

[+] EMBL CA757223             [AAACAAAACCCGCCACCTCTAAACCCTCGCCCTCCTCCTCCTCCCATGGCGATGGCCGGCGCCGCCGGGCGGTGCCTCATGCTGACCCGCCCGTCCCCTCTCCTCCGCCTCCGCCTCCTCCGCGCCGCCCTCACGACCACCACCACGGCGGCGGGGGCATCCGCTTCCCCCGCCGCAGTCACCGCGCCGACCGAGCCCGACGCGGCGAGGGAGGCCCCGTCCCGCCACGAGCTCCTCCTCGAGCGCCTCCGGCAGCGCCACCTCAAGGGCGTGCCCGCTGCTACCCCGAGGCCGGCGCAGCGGGAGAAGGGGAGGGGCGGCGGAGGCGCGCAGGAGCTGCAGCAGAAGAGGAGGGTCGAGGTGGTGGAAAGCTTCGAGGAGCTCGGGCTCGGGGAGGAGGTGATGGCCGCGCTCGGGGAGATGGGTATCTCCAAGCCCACCGAGATCCAGTGCGTTGGTGTGCCCGCCGGGCTGGCTGGTACAGCGTTGGGCTCGGTCGCACACCGGCTCCCGGAAGACGCTTGCCTACCTGATGCCGGCGTTAAGTACTGGTTTGAGAAGAAGCCCCGGCCCGCAAAGCCAAGTGAAGCCGCGCGGGCACGAGCGATTGATTTCCGCCCGCACACGGGAGCAGCCATGTAGATGGCCTCGCGGCCAAA]


>consensus_8405#1 AAACAAAACCCGCCACCTCTAAACCCTCGCCCTCCTCCTCCTCCCATGGCGATGGCCGGC GCCGCCGGGCGGTGCCTCATGCTGACCCGCCCGTCCCCTCTCCTCCGCCTCCGCCTCCTC CGCGCCGCCCTCACGACCACCACCACGGCGGCGGGGGCATCCGCTTCCCCCGCCGCAGTC ACCGCGCCGACCGAGCCCGACGCGGCGAGGGAGGCCCCGTCCCGCCACGAGCTCCTCCTC GAGCGCCTCCGGCAGCGCCACCTCAAGGGCGTGCCCGCTGCTACCCCGAGGCCGGCGCAG CGGGAGAAGGGGAGGGGCGGCGGAGGCGCGCAGGAGCTGCAGCAGAAGAGGAGGGTCGAG GTGGTGGAAAGCTTCGAGGAGCTCGGGCTCGGGGAGGAGGTGATGGCCGCGCTCGGGGAG ATGGGTATCTCCAAGCCCACCGAGATCCAGTGCGTTGGTGTGCCCGCCGGGCTGGCTGGT ACAGCGTTGGGCTCGGTCGCACACCGGCTCCCGGAAGACGCTTGCCTACCTGATGCCGGC GTTAAGTACTGGTTTGAGAAGAAGCCCCGGCCCGCAAAGCCAAGTGAAGCCGCGCGGGCA CGAGCGATTGATTTCCGCCCGCACACGGGAGCAGCCATGTAGATGGCCTCGCGGCCAAA



consensusID : consensus_8405#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 523
fasta sequence
                              [GNNNACAATCTCAAGGTTGTCAAGGACACAACTNCATCNACAAAGNGCTCGCCGACTAATAATCAACCGAAAGTCAAAATCAACATCTTCAGGGAAAGCAAAGCCAGTGCGATCTGCTAAGCCGAGCAAGANTAGCAGCCCTAGCCCCAAGGTTGCNAAGANNCGACCAAAACCNGAAGGTCAGAAAGGGGATGCTCTGAACAAGCTGGGTANTAAGCTCACTGTGGTTGGATNCANAGGCCNCACTCAAGGGAAATCNGCACAANCATCATAGGGAAGGCTCCNAGAATTTTGGGGTAGTGAAATTCAACTTTTTGTAAATATCTGTTGACTTGTTTCCGGCCGTTTTCCCCTGCAGGCTTGCCAAGCCCCTAATTGAANACGCCCCTTCTAAAAAGAAAAACATAAAACATTGAAATCTTACCACAATACGTACATCTATCTGTTTACATTGGTTGAACAATAATATTCNANCTGTATCACTGTTCCATGAAATAAACCCCAAAATTGCATCTGTNAATNG]

[+] EMBL BE228480             [GNNNACAATCTCAAGGTTGTCAAGGACACAACTNCATCNACAAAGNGCTCGCCGACTAATAATCAACCGAAAGTCAAAATCAACATCTTCAGGGAAAGCAAAGCCAGTGCGATCTGCTAAGCCGAGCAAGANTAGCAGCCCTAGCCCCAAGGTTGCNAAGANNCGACCAAAACCNGAAGGTCAGAAAGGGGATGCTCTGAACAAGCTGGGTANTAAGCTCACTGTGGTTGGATNCANAGGCCNCACTCAAGGGAAATCNGCACAANCATCATAGGGAAGGCTCCNAGAATTTTGGGGTAGTGAAATTCAACTTTTTGTAAATATCTGTTGACTTGTTTCCGGCCGTTTTCCCCTGCAGGCTTGCCAAGCCCCTAATTGAANACGCCCCTTCTAAAAAGAAAAACATAAAACATTGAAATCTTACCACAATACGTACATCTATCTGTTTACATTGGTTGAACAATAATATTCNANCTGTATCACTGTTCCATGAAATAAACCCCAAAATTGCATCTGTNAATNG]


>consensus_8405#2 GNNNACAATCTCAAGGTTGTCAAGGACACAACTNCATCNACAAAGNGCTCGCCGACTAAT AATCAACCGAAAGTCAAAATCAACATCTTCAGGGAAAGCAAAGCCAGTGCGATCTGCTAA GCCGAGCAAGANTAGCAGCCCTAGCCCCAAGGTTGCNAAGANNCGACCAAAACCNGAAGG TCAGAAAGGGGATGCTCTGAACAAGCTGGGTANTAAGCTCACTGTGGTTGGATNCANAGG CCNCACTCAAGGGAAATCNGCACAANCATCATAGGGAAGGCTCCNAGAATTTTGGGGTAG TGAAATTCAACTTTTTGTAAATATCTGTTGACTTGTTTCCGGCCGTTTTCCCCTGCAGGC TTGCCAAGCCCCTAATTGAANACGCCCCTTCTAAAAAGAAAAACATAAAACATTGAAATC TTACCACAATACGTACATCTATCTGTTTACATTGGTTGAACAATAATATTCNANCTGTAT CACTGTTCCATGAAATAAACCCCAAAATTGCATCTGTNAATNG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8405#0      GGGCATCCGCCGTCACCGCGCCGACCGAGCCCGAGACCACGGCGAGGGAGGCCCCGTCCC 60
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      GCCACGAGCTCCTCCTCGAGCGCCTCCGGCAGCGCCACCTCAAGGGCGTGCCCGCTGCTA 120
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      CCCCGAGGCCGGCGCAGCGGGAGAAGGGGAGGGGCGGCGGCGGCGGTGGCGCGCAGGAGC 180
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      TGCAGCAGAAGAGGAGGGTCGAGGTGGTGGATAGTTTCGAGGAGCTCGGGCTCGGGGAGG 240
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      AGGTGATGGCCGCGCTCGGGGAGATGGGTATCTCCAAGCCCACCGAGATCCAGTGCGTTG 300
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      GTGTGCCCGCCGTGCTGGCTGGCACCAGTGTTGTGCTTGGCTCGCACACCGGTTCCGGGA 360
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      AGACGCTCGCCTACCTGCTCCCGCTTGTTCAGCTACTGCGTCGTGATGAAGCAATGTTGG 420
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      GAATGTCAATGAAACCAAGGAGGCCAAGAGCAGTAGTTCTCTGCCCCACAAGGGAGCTGA 480
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      CTGAGCAGGTCTTCCGTGTCGCAAAGTCCATAAGCCATCACGCACGTTTTCGGTCAACAA 540
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      TGGTTAGTGGAGGCAGCCGTATAAGGCCCCAGGAAGATTCTCTGAACATGCCTGTAGACA 600
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      TGGTTGTTGGGACTCCTGGGAGGATTCTTGATCATATCAAGGATGGAAACATGGTTTATG 660
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      GTGATATCAAGTATCTGGTCCTTGATGAGGCAGATACGATGTTTGATCAAGGTTTTGGAC 720
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      CAGACATTAGGAAGTTTCTTGCTCCTTTGAAGAATCGTGCTGCAAAACCTGGCGATCAGG 780
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      GGTTCCAAACTGTATTAGTTACTGCTACTATGACCAAGGCAGTACAAAAGCTGATAGGTG 840
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      AGGAATTTGAAGGTATTGTTCATTTACGGACAACAACCTTTCAAAAAAGAGTTGCAACTG 900
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      CACGGCATGACTTCATCAAACTGTCTGGTTCAGAAAACAAACTAGAGGCTCTTCTGCAGG 960
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      TTCTTGAGCCAAGTTTAGCAAAGGGAAATAAAGTTATGGTGTTCTGCAATACTTTGAATT 1020
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      CAAGTCGTGCCGTGGACCATTTTCTGACTGAAAATCAGATATCTACTGTAAACTACCATG 1080
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      GGGAAGTTCCTGCTGAAGAGAGGGTTGAGAACCTGAACAAGTTCCGGAATGAAGAAGGGG 1140
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      ATTGCCCAACACTGGTCTGCACTGACCTAGCAGCTCGAGGCCTAGACTTGGATGTTGACC 1200
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      ATGTCATCATGTTTGACTTCCCATCAAACTCTATTGATTACCTCCATAGAACTGGAAGAA 1260
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      CAGCACGCATGGGAGCCAAAGGGAAAGTTACAAGCCTTGTTGCGAAGAAAGATGTGACTT 1320
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ------------------------------------------------------------
                                                                                  

consensus_8405#0      TAGCAACACGGATAGAAGAGGCTATGAAGAAAAACGAGAGCTTAGAGGCACTGACGACTA 1380
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ----------------------------------------------------------AA 2
                                                                                  

consensus_8405#0      ATAACGTCAGAAGGGCGGCCGTCAACCCACAGTACACTAGTACCAAAGGACGACCAAGCG 1440
consensus_8405#2      ------------------------------------------------------------
consensus_8405#1      ACAAAACCCGCCACCTCTAAACCCTCGCCCTCCTCCTCCTCCCATGGCGATGGCCGGCGC 62
                                                                                  

consensus_8405#0      CTCTAAAGGTAGTAAACCAGAAGGGTAGAAGGGGAGTTGCACTGCAGACCAAGTCATCAA 1500
consensus_8405#2      ----------------------------------------------GNNNACAATCTCAA 14
consensus_8405#1      CGCCGGGCGGTGCCTCATGCTGACCCGCCCGTCCCCTCTCCTCCGCCTCCGCCTCCTCCG 122
                                                                              **  

consensus_8405#0      GGA--TTGTCAAGGACACAACTTCATCCAGAAGG-----CGCTCGCCAATTAGGAGTCAA 1553
consensus_8405#2      GG---TTGTCAAGGACACAACTNCATCNACAAAG-----NGCTCGCCGACTAATAATCAA 66
consensus_8405#1      CGCCGCCCTCACGACCACCACCACGGCGGCGGGGGCATCCGCTTCCCCCGCCGCAGTCAC 182
                       *      *** *  *** **  *  *      *      ***  **       * *** 

consensus_8405#0      C-C-AAGGTCGAAATCGACATCTTCAGGAAAAGCAAAACCAGT-GCGATCTGCTAAGCCG 1610
consensus_8405#2      C-CGAAAGTCAAAATCAACATCTTCAGGGAAAGCAAAGCCAGT-GCGATCTGCTAAGCCG 124
consensus_8405#1      CGCGCCGACCGAGCCCGACGCGGCGAGGGAGGCCCCGTCCCGCCACGAGCTCCTCC-TCG 241
                      * *      * *   * **      *** *   *    ** *   *** ** **    **

consensus_8405#0      AGCAAGAGTAGCAGCCCTAGCCCCAAGGT-----------TGCAAAGAGCCGACCGAGAC 1659
consensus_8405#2      AGCAAGANTAGCAGCCCTAGCCCCAAGGT-----------TGCNAAGANNCGACCAAAAC 173
consensus_8405#1      AGCGCCTCCGGCAGCGCCACCTCAAGGGCGTGCCCGCTGCTACCCCGAGGCCGGCGCAGC 301
                      ***       ***** * * * * * **            * *   **  *   *    *

consensus_8405#0      CAGAGGGTCGGAAAGG----GGATGCTCTGAACA-----AGCTGGGTAGTAAGCTCAGTG 1710
consensus_8405#2      CNGAAGGTCAGAAAGG----GGATGCTCTGAACA-----AGCTGGGTANTAAGCTCACTG 224
consensus_8405#1      GGGAGAAGGGGAGGGGCGGCGGAGGCGCGCAGGAGCTGCAGCAGAAGAGGAGGGTCGAGG 361
                        **      **  **    *** ** *  *  *     *** *   *  * * **   *

consensus_8405#0      TGGTTGGA---TTCAGAGGCCGCAGCTCAGGGAAATCGGCACAAGCATCATAGTGA-GGC 1766
consensus_8405#2      TGGTTGGA---TNCANAGGCCNCACTCAAGGGAAATCNGCACAANCATCATAGGGAAGGC 281
consensus_8405#1      TGGTGGAAAGCTTCGAGGAGCTCGGGCTCGGGGAGGAGGTGATGGCCGCGCTCGGGGAGA 421
                      **** * *   * *   *  * *      *** *    *      *  *     *   * 

consensus_8405#0      CTCGAGAATTTTGGG-TAGTGAAATTCAACTTTTTGTAAATATCTGT-GACTTGTTTC-G 1823
consensus_8405#2      TCCNAGAATTTTGGGGTAGTGAAATTCAACTTTTTGTAAATATCTGTTGACTTGTTTCCG 341
consensus_8405#1      TGGGTATCTCCAAGCCCACCGAGATCCAGTGCGTTG-GTGTGCCCGCCGGGCTGGCTGGT 480
                              *    *   *  ** ** **     ***    *  * *  *   **  *   

consensus_8405#0      GCCGTTTTCCC-TGCAGGCTTGC-AAGACCCTAATTGA-GACGCCCCTTCTAAAAG--AA 1878
consensus_8405#2      GCCGTTTTCCCCTGCAGGCTTGCCAAGCCCCTAATTGAANACGCCCCTTCTAAAAAGAAA 401
consensus_8405#1      ACAGCGTTG---GGCTCGGTCGCACACCGGCTCCCGGAAGACGCTTGCCTACCTGATGCC 537
                       * *  **     **  * * **  *    **    **  ****                

consensus_8405#0      AACGTAGAACA-----CTGAAATCTTACCACAGTACGTACATCTATCTGTTTACATTG-T 1932
consensus_8405#2      AACATAAAACA-----TTGAAATCTTACCACAATACGTACATCTATCTGTTTACATTGGT 456
consensus_8405#1      GGCGTTAAGTACTGGTTTGAGAAGAAGCCCCGGCCCGCAAAGCCAAGTG---AAGCCGCG 594
                        * *  *  *      *** *     ** *    ** * * * *  **   *    *  

consensus_8405#0      TGAACAATAATAT--CATCTGTTTCACTGT-CCATGAA-TAAACACGAAG--TGCATAAA 1986
consensus_8405#2      TGAACAATAATATTCNANCTGTATCACTGTTCCATGAAATAAACCCCAAAATTGCATCTG 516
consensus_8405#1      CGGGCACGAGCGATTGATTT---CCGCCCGCACACGGGAGCAGCCATGTAGATGGCCTCG 651
                       *  **  *       *  *    * *     ** *     * *        **      

consensus_8405#0      AAAA---- 1990
consensus_8405#2      TNAATNG- 523
consensus_8405#1      CGGCCAAA 659
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)