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Oryza sativa
cluster # 8406 cluster # 8406       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8406#0 length = 2375 sequences # 4  
consensus_8406#1 length = 619 sequences # 1  

consensusID : consensus_8406#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2375
fasta sequence
                              [GGCAAATCACATCCATCCATCCATTGCCATTGCCACCCATGGCGCCACTCCCCGCCGCCGCCGCCGCGCCGGCCTTCCTCTTCCTCTCCCCTCCCGGCAAACTGCCCGGCGGCAAACCCAGGCTGAAACCCTCCTGTGCCGCCTCCACCTCGTCTTCGTCGTCGTCGTCACCCCCGCTCCTCCGCGCCATCCGCGCCCTCCCCGACGCTGCCGACCTCGCCCCCACCCTCCACGACTTCTTCCCCCCGGCCTCGCCGCCCTCCACCTCCGACGCGCTCCTCCTCCTCAACTACCTCCACCCCTCCTGGCGCAAGTCCCTCTCCCTCCTCTGCTGGCTCCGCGCCCTCCCCGATGGCGCCTTCCCACTTGACACCATCGTCTTCAATGTCGCCCTCAAGTCCCTCCGCGCCGCCCGCCAGTGGCCCCAGGCCGAGCGCCTCGCCCTCGACATGCTCGCCTCCGGTGTCCCCCTCGACAACATCACCTACTCCACCCTCATCACCGCCGCCCGCCGCTGCCGCCAGTTCGACAAGGCCGTCGAGTGGTTCGAGCGCATGTACGCCTCCGACGGCGTCCTCCCCGACGAGGTCACCTACTCAGCCATCCTCGACGTCTACGCGCAGCTCGGCATGAAGGAGGAGGTCCTCGCGCTCTTCGACCGCGCGCGCGGCAGCGGCTGGAAGCCCGACCATGTCGCTTTCGCCGTCCTCGCCAAGATGTTCGGCGAGGCCGGCGACTACGACGGCATCCAGTTCGTCTTCAAGGAGATGCGCGAGGTAGGCATCAAGCCCAACATCTTCGTCTACAACGCGCTGCTGGAGGCGCTGGGCAAGACCGGCAAGCCAGGCCTGGCACGCAACCTGTTCGAGGAAATGACGGCCGAGGGCGTCGAGCCCAACGCGCGCACGCTCACGGCGCTCGCAAAGATCTACGGGAGGGCGCGCTGGGGGCGCGACGCGCTGCAGCTCTGGGAGCAGATGCGGGAGAAGAAGCTGCCCGCCGACAACATCCTCTGCAACACGCTTCTGAGCATGTGTGCCGACGTGGGGCTGGTGGGCGAGGCCGAGCAGCTCTTCAGCGAGATGAAGGACCCGGACCTGGGCGACGTGCCGAAGCCAGACAAGTGGAGCTACACGGCCATGATCAACATCTATGGGAGCAGCGGGGATGCGGACCGCGCACTCCAGCTGTTTGCGGAAATGGTGGAGAGCGGAATCGAGCCCAACATCATGAGCTATACCATTGTGATCCAGTGCCTGGGAAAGGCAGGGAGGATACAGGAGGCGGTGGACGTGCTAGAGGCTGGGATGGCCAAGGGCCTCAAGCCCGATGACCGACTCTGCGGGTGCCTGCTCTCCGTGGTCGCGCTGAGCAGCGGGGACGAGACGGAGGTGATTCTGGCTTGCCTGGAGAAGGTGAGGAGTAATCTGGTGAAGCTGATCAGGATGCTCGGGGATGCCCGGGTGGGAGTGGAGGACCTGAGGGTGGAGCTGAAGGGCATACTGAACAGCGCGGCCCCTGAGGTGCGGCGGCCCTACTGCAACTGCCTGATCGACATATGCCGCAACCATGGGTACCCTAGTGAGAGGGCAGTGGAGCTGTTCCGCCTCGCCCGGCACTATGGCCTGTACTCGAAGATCCATACGAGGAAGGAGGAGGAGTGGTCGCTGGACCTGCGGTCGCTGTCGGTAGGCGCGGCCAAGACGGCGTTCGACGACTGGATGAAGACCATCCGGGAACACGAGGAGGAGGAGGCTCTGCCACAGACGTTTAGCGTGTACACCGGCTCCAGCACCCACAAATTCGCGCAGGGGCTGGCGACCGCGGTGGCCTCTCATCTTGAGCAGGTGGGGGCGCCGTTCCGTGCCAGCGACTCCCAGCTTGGGAGCTTCATCAGCAGCAGGGATGATCTGCTCTCCTGGTTGCACACCACCATGTCATCGCCGGATGTTGCCGTATGATCGCCGGTTGGTTGCATCATGCAGTCTTGCAGACAGGACAGGAGGGACGACGGCCGTGCCGTCACATTAAAATGCTCGTCATTGTTTGGTTTTGGTTGGCTGCAAATTAAAATGCTCCCAAAGAATAGGATTGCGAGGAGGATGGATGGATGGTGCTGTACATGCGCAAACACTCCGGATAATTGTCATTTCTCTGCCTTTTTTATACTAGTCCAGTTTGTAGGAAGCTGGACAAGTGATAAGCAGATAAGCTAGTACTAGTGTGGTTTTCTCACCTCTTTTATTTATACTCCTACTAGATTACTCACAGTTGTTAGGGATGAGGTGAGGGCACTCTGAAGATGAGAGAGAGCTCACAGTTTATGGTTTTTGTACGACGAAATTATTATTACATATCTGGGTCTGGGTGCCAGC]

[+] EMBL AK067137             [GGCAAATCACATCCATCCATCCATTGCCATTGCCACCCATGGCGCCACTCCCCGCCGCCGCCGCCGCGCCGGCCTTCCTCTTCCTCTCCCCTCCCGGCAAACTGCCCGGCGGCAAACCCAGGCTGAAACCCTCCTGTGCCGCCTCCACCTCGTCTTCGTCGTCGTCGTCACCCCCGCTCCTCCGCGCCATCCGCGCCCTCCCCGACGCTGCCGACCTCGCCCCCACCCTCCACGACTTCTTCCCCCCGGCCTCGCCGCCCTCCACCTCCGACGCGCTCCTCCTCCTCAACTACCTCCACCCCTCCTGGCGCAAGTCCCTCTCCCTCCTCTGCTGGCTCCGCGCCCTCCCCGATGGCGCCTTCCCACTTGACACCATCGTCTTCAATGTCGCCCTCAAGTCCCTCCGCGCCGCCCGCCAGTGGCCCCAGGCCGAGCGCCTCGCCCTCGACATGCTCGCCTCCGGTGTCCCCCTCGACAACATCACCTACTCCACCCTCATCACCGCCGCCCGCCGCTGCCGCCAGTTCGACAAGGCCGTCGAGTGGTTCGAGCGCATGTACGCCTCCGACGGCGTCCTCCCCGACGAGGTCACCTACTCAGCCATCCTCGACGTCTACGCGCAGCTCGGCATGAAGGAGGAGGTCCTCGCGCTCTTCGACCGCGCGCGCGGCAGCGGCTGGAAGCCCGACCATGTCGCTTTCGCCGTCCTCGCCAAGATGTTCGGCGAGGCCGGCGACTACGACGGCATCCAGTTCGTCTTCAAGGAGATGCGCGAGGTAGGCATCAAGCCCAACATCTTCGTCTACAACGCGCTGCTGGAGGCGCTGGGCAAGACCGGCAAGCCAGGCCTGGCACGCAACCTGTTCGAGGAAATGACGGCCGAGGGCGTCGAGCCCAACGCGCGCACGCTCACGGCGCTCGCAAAGATCTACGGGAGGGCGCGCTGGGGGCGCGACGCGCTGCAGCTCTGGGAGCAGATGCGGGAGAAGAAGCTGCCCGCCGACAACATCCTCTGCAACACGCTTCTGAGCATGTGTGCCGACGTGGGGCTGGTGGGCGAGGCCGAGCAGCTCTTCAGCGAGATGAAGGACCCGGACCTGGGCGACGTGCCGAAGCCAGACAAGTGGAGCTACACGGCCATGATCAACATCTATGGGAGCAGCGGGGATGCGGACCGCGCACTCCAGCTGTTTGCGGAAATGGTGGAGAGCGGAATCGAGCCCAACATCATGAGCTATACCATTGTGATCCAGTGCCTGGGAAAGGCAGGGAGGATACAGGAGGCGGTGGACGTGCTAGAGGCTGGGATGGCCAAGGGCCTCAAGCCCGATGACCGACTCTGCGGGTGCCTGCTCTCCGTGGTCGCGCTGAGCAGCGGGGACGAGACGGAGGTGATTCTGGCTTGCCTGGAGAAGGTGAGGAGTAATCTGGTGAAGCTGATCAGGATGCTCGGGGATGCCCGGGTGGGAGTGGAGGACCTGAGGGTGGAGCTGAAGGGCATACTGAACAGCGCGGCCCCTGAGGTGCGGCGGCCCTACTGCAACTGCCTGATCGACATATGCCGCAACCATGGGTACCCTAGTGAGAGGGCAGTGGAGCTGTTCCGCCTCGCCCGGCACTATGGCCTGTACTCGAAGATCCATACGAGGAAGGAGGAGGAGTGGTCGCTGGACCTGCGGTCGCTGTCGGTAGGCGCGGCCAAGACGGCGTTCGACGACTGGATGAAGACCATCCGGGAACACGAGGAGGAGGAGGCTCTGCCACAGACGTTTAGCGTGTACACCGGCTCCAGCACCCACAAATTCGCGCAGGGGCTGGCGACCGCGGTGGCCTCTCATCTTGAGCAGGTGGGGGCGCCGTTCCGTGCCAGCGACTCCCAGCTTGGGAGCTTCATCAGCAGCAGGGATGATCTGCTCTCCTGGTTGCACACCACCATGTCATCGCCGGATGTTGCCGTATGATCGCCGGTTGGTTGCATCATGCAGTCTTGCAGACAGGACAGGAGGGACGACGGCCGTGCCGTCACATTAAAATGCTCGTCATTGTTTGGTTTTGGTTGGCTGCAAATTAAAATGCTCCCAAAGAATAGGATTGCGAGGAGGATGGATGGATGGTGCTGTACATGCGCAAACACTCCGGATAATTGTCATTTCTCTGCCTTTTTTATACTAGTCCAGTTTGTAGGAAGCTGGACAAGTGATAAGCAGATAAGCTAGTACTAGTGTGGTTTTCTCACCTCTTTTATTTATACTCCTACTAGATTACTCACAGTTGTTAGGGATGAGGTGAGGGCACTCTGAAGATGAGAGAGAGCTCACAGTTTATGGTTTTTGTACGACGAAATTATTATTACATATCTGGGTCTGGGTGCCAGC]
[-] EMBL CB649674             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGGTGAGGAGTAATCTGGTGAAGCTGATCAGGATGCTCGGGGATGCCCGGGTGGGAGTGGAGGACCTGAGGGTGGAGCTGAAGGGCATACTGAACAGCGCGGCCCCTGAGGTGCGGCGGCCCTACTGCAACTGCCTGATCGACATATGCCGCAACCATGGGTACCCTAGTGAGAGGGCAGTGGAGCTGTTCCGCCTCGCCCGGCACTATGGCCTGTACTCGAAGATCCATACGAGGAAGGAGGAGGAGTGGTCGCTGGACCTGCGGTCGCTGTCGGTAGGCGCGGCCAAGACGGCGTTCGACGACTGGATGAAGACCATCCGGGAACACGAGGAGGAGGAGGCTCTGCCACAGACGTTTAGCGTGTACACCGGCTCCAGCACCCACAAATTCGCGCAGGGGCTGGCGACCGCGGTGGCCTCTCATCTTGAGCAGGTGGGGGCGCCGTTCCGTGCCAGCGACTCCCAGCTTGGGAGCTTCATCAGCAGCAGGGATGATCTGCTCTCCTGGTTGCACACCACCATGTCATCGCCGGATGTTGCCGTATGATCGCCGGTTGGTTGCATCATGCAGTCTTGCAGACAGGACAGGAGGGACGACGGCCGTGCCGTCACATTAAAATGCTCGTCATTGTTTGGTTTTGGTTGGCTGCAAATTAAAATGCTCCCAAAGAATAGGATTGCGAGGAGGATGGATGGATGGTGCTGTACATGCGCAAACACTCCGGATAATTGTCATTTCTCTGCCTTTTTTATACTAGTCCAGTTTGTAGGAAGCTGGACAAGTGATAA                                                                                                                                                                            ]
[-] EMBL CB649645             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGAGTGGAGGACCTGAGGGTGGAGCTGAAGGGCATACTGAACAGCGCGGCCCCTGAGGTGCGGCGGCCCTACTGCAACTGCCTGATCGACATATGCCGCAACCATGGGTACCCTAGTGAGAGGGCAGTGGAGCTGTTCCGCCTCGCCCGGCACTATGGCCTGTACTCGAAGATCCATACGAGGAAGGAGGAGGAGTGGTCGCTGGACCTGCGGTCGCTGTCGGTAGGCGCGGCCAAGACGGCGTTCGACGACTGGATGAAGACCATCCGGGAACACGAGGAGGAGGAGGCTCTGCCACAGACGTTTAGCGTGTACACCGGCTCCAGCACCCACAAATTCGCGCAGGGGCTGGCGACCGCGGTGGCCTCTCATCTTGAGCAGGTGGGGGCGCCGTTCCGTGCCAGCGACTCCCAGCTTGGGAGCTTCATCAGCAGCAGGGATGATCTGCTCTCCTGGTTGCACACCACCATGTCATCGCCGGATGTTGCCGTATGATCGCCGGTTGGTTGCATCATGCAGTCTTGCAGACAGGACAGGAGGGACGACGGCCGTGCCGTCACATTAAAATGCTCGTCATTGTTTGGTTTTGGTTGGCTGCAAATTAAAATGCTCCCAAAGAATAGGATTGCGAGGAGGATGGATGGATGGTGCTGTACATGCGCAAACACTCCGGATAATTGTCATTTCTCTGCCTTTTTTATACTAGTCCAGTTTGTAGGAAGCTGGACAAGTGATAA                                                                                                                                                                            ]
[-] EMBL CB649673             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCCCCTGAGGTGCGGCGGCCTTACTGCAACTGCCTGATCGACATATGCCGCAACCATGGGTACCCTAGTGAGAGGGCAGTGGAGCTGTTCCGCCTCGCCCGGCACTATGGCCTGTACTCGAAGATCCATACGAGGAAGGAGGAGGAGTGGTCGCTGGACCTGCGGTCGCTGTCGGTAGGCGCGGCCAAGACGGCGTTCGACGACTGGATGAAGACCATCCGGGAACACGAGGAGGAGGAGGCTCTGCCACAGACGTTTAGCGTGTACACCGGCTCCAGCACCCACAAATTCGCGCAGGGGCTGGCGACCGCGGTGGCCTCTCATCTTGAGCAGGTGGGGGCGCCGTTCCGTGCCAGCGACTCCCAGCTTGGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_8406#0 GGCAAATCACATCCATCCATCCATTGCCATTGCCACCCATGGCGCCACTCCCCGCCGCCG CCGCCGCGCCGGCCTTCCTCTTCCTCTCCCCTCCCGGCAAACTGCCCGGCGGCAAACCCA GGCTGAAACCCTCCTGTGCCGCCTCCACCTCGTCTTCGTCGTCGTCGTCACCCCCGCTCC TCCGCGCCATCCGCGCCCTCCCCGACGCTGCCGACCTCGCCCCCACCCTCCACGACTTCT TCCCCCCGGCCTCGCCGCCCTCCACCTCCGACGCGCTCCTCCTCCTCAACTACCTCCACC CCTCCTGGCGCAAGTCCCTCTCCCTCCTCTGCTGGCTCCGCGCCCTCCCCGATGGCGCCT TCCCACTTGACACCATCGTCTTCAATGTCGCCCTCAAGTCCCTCCGCGCCGCCCGCCAGT GGCCCCAGGCCGAGCGCCTCGCCCTCGACATGCTCGCCTCCGGTGTCCCCCTCGACAACA TCACCTACTCCACCCTCATCACCGCCGCCCGCCGCTGCCGCCAGTTCGACAAGGCCGTCG AGTGGTTCGAGCGCATGTACGCCTCCGACGGCGTCCTCCCCGACGAGGTCACCTACTCAG CCATCCTCGACGTCTACGCGCAGCTCGGCATGAAGGAGGAGGTCCTCGCGCTCTTCGACC GCGCGCGCGGCAGCGGCTGGAAGCCCGACCATGTCGCTTTCGCCGTCCTCGCCAAGATGT TCGGCGAGGCCGGCGACTACGACGGCATCCAGTTCGTCTTCAAGGAGATGCGCGAGGTAG GCATCAAGCCCAACATCTTCGTCTACAACGCGCTGCTGGAGGCGCTGGGCAAGACCGGCA AGCCAGGCCTGGCACGCAACCTGTTCGAGGAAATGACGGCCGAGGGCGTCGAGCCCAACG CGCGCACGCTCACGGCGCTCGCAAAGATCTACGGGAGGGCGCGCTGGGGGCGCGACGCGC TGCAGCTCTGGGAGCAGATGCGGGAGAAGAAGCTGCCCGCCGACAACATCCTCTGCAACA CGCTTCTGAGCATGTGTGCCGACGTGGGGCTGGTGGGCGAGGCCGAGCAGCTCTTCAGCG AGATGAAGGACCCGGACCTGGGCGACGTGCCGAAGCCAGACAAGTGGAGCTACACGGCCA TGATCAACATCTATGGGAGCAGCGGGGATGCGGACCGCGCACTCCAGCTGTTTGCGGAAA TGGTGGAGAGCGGAATCGAGCCCAACATCATGAGCTATACCATTGTGATCCAGTGCCTGG GAAAGGCAGGGAGGATACAGGAGGCGGTGGACGTGCTAGAGGCTGGGATGGCCAAGGGCC TCAAGCCCGATGACCGACTCTGCGGGTGCCTGCTCTCCGTGGTCGCGCTGAGCAGCGGGG ACGAGACGGAGGTGATTCTGGCTTGCCTGGAGAAGGTGAGGAGTAATCTGGTGAAGCTGA TCAGGATGCTCGGGGATGCCCGGGTGGGAGTGGAGGACCTGAGGGTGGAGCTGAAGGGCA TACTGAACAGCGCGGCCCCTGAGGTGCGGCGGCCCTACTGCAACTGCCTGATCGACATAT GCCGCAACCATGGGTACCCTAGTGAGAGGGCAGTGGAGCTGTTCCGCCTCGCCCGGCACT ATGGCCTGTACTCGAAGATCCATACGAGGAAGGAGGAGGAGTGGTCGCTGGACCTGCGGT CGCTGTCGGTAGGCGCGGCCAAGACGGCGTTCGACGACTGGATGAAGACCATCCGGGAAC ACGAGGAGGAGGAGGCTCTGCCACAGACGTTTAGCGTGTACACCGGCTCCAGCACCCACA AATTCGCGCAGGGGCTGGCGACCGCGGTGGCCTCTCATCTTGAGCAGGTGGGGGCGCCGT TCCGTGCCAGCGACTCCCAGCTTGGGAGCTTCATCAGCAGCAGGGATGATCTGCTCTCCT GGTTGCACACCACCATGTCATCGCCGGATGTTGCCGTATGATCGCCGGTTGGTTGCATCA TGCAGTCTTGCAGACAGGACAGGAGGGACGACGGCCGTGCCGTCACATTAAAATGCTCGT CATTGTTTGGTTTTGGTTGGCTGCAAATTAAAATGCTCCCAAAGAATAGGATTGCGAGGA GGATGGATGGATGGTGCTGTACATGCGCAAACACTCCGGATAATTGTCATTTCTCTGCCT TTTTTATACTAGTCCAGTTTGTAGGAAGCTGGACAAGTGATAAGCAGATAAGCTAGTACT AGTGTGGTTTTCTCACCTCTTTTATTTATACTCCTACTAGATTACTCACAGTTGTTAGGG ATGAGGTGAGGGCACTCTGAAGATGAGAGAGAGCTCACAGTTTATGGTTTTTGTACGACG AAATTATTATTACATATCTGGGTCTGGGTGCCAGC



consensusID : consensus_8406#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 619
fasta sequence
                              [CAGTGGAGCTGTTCCGCCTCGCCCGGCAGTATGGCCTGTACTCGAAGATCCATACGAGGAAGGAGGAGGAGTGGTCGCTGGACCTGCGGTCGCTGTCGGTAGGGGCGGCCAAGACGGCGTTCGACGACTGGATGAAGACCATCCGGGAACACGAGGAGGAGGAGGCTTTGCCACAGACGTTTAGCGTGTACACCGGCTCCAGCACCCACAAATTCGCGCAGGGGCTGGCGACCGCGGTGGCCTCTCATCTTGAGCAGGTGGGGGCGCCGTTCCGTGCCAGCGACTCCCAGCTTGGGAGCTTCATCAGCAGCAGGGATGATCTGCTCTCCTGGTTGCACACCACCATGTCATCGCCGGATGTTGCCGTATGATCGCCGGTTGGTTGCATCATGCAGTCTTGCAGACAGGACAGGAGGGACGACGGCCGTGCCGTCACATTAAAATGCTCGTCATTGTTTGGTTTTGGTTGGCTGCAAATTAAAATGCTCCCAAAGAATAGGATTGCGAGGAGGATGGATGGATGGTGCTGTACATGGGCAAACACTCGGGATAATTGTCATTTTTTTGCCTTTTTTATANTAGTCGCTCGAACCACTAGACGGCCTTGTAGAGAGCTGGC]

[-] EMBL CB649644             [CAGTGGAGCTGTTCCGCCTCGCCCGGCAGTATGGCCTGTACTCGAAGATCCATACGAGGAAGGAGGAGGAGTGGTCGCTGGACCTGCGGTCGCTGTCGGTAGGGGCGGCCAAGACGGCGTTCGACGACTGGATGAAGACCATCCGGGAACACGAGGAGGAGGAGGCTTTGCCACAGACGTTTAGCGTGTACACCGGCTCCAGCACCCACAAATTCGCGCAGGGGCTGGCGACCGCGGTGGCCTCTCATCTTGAGCAGGTGGGGGCGCCGTTCCGTGCCAGCGACTCCCAGCTTGGGAGCTTCATCAGCAGCAGGGATGATCTGCTCTCCTGGTTGCACACCACCATGTCATCGCCGGATGTTGCCGTATGATCGCCGGTTGGTTGCATCATGCAGTCTTGCAGACAGGACAGGAGGGACGACGGCCGTGCCGTCACATTAAAATGCTCGTCATTGTTTGGTTTTGGTTGGCTGCAAATTAAAATGCTCCCAAAGAATAGGATTGCGAGGAGGATGGATGGATGGTGCTGTACATGGGCAAACACTCGGGATAATTGTCATTTTTTTGCCTTTTTTATANTAGTCGCTCGAACCACTAGACGGCCTTGTAGAGAGCTGGC]


>consensus_8406#1 CAGTGGAGCTGTTCCGCCTCGCCCGGCAGTATGGCCTGTACTCGAAGATCCATACGAGGA AGGAGGAGGAGTGGTCGCTGGACCTGCGGTCGCTGTCGGTAGGGGCGGCCAAGACGGCGT TCGACGACTGGATGAAGACCATCCGGGAACACGAGGAGGAGGAGGCTTTGCCACAGACGT TTAGCGTGTACACCGGCTCCAGCACCCACAAATTCGCGCAGGGGCTGGCGACCGCGGTGG CCTCTCATCTTGAGCAGGTGGGGGCGCCGTTCCGTGCCAGCGACTCCCAGCTTGGGAGCT TCATCAGCAGCAGGGATGATCTGCTCTCCTGGTTGCACACCACCATGTCATCGCCGGATG TTGCCGTATGATCGCCGGTTGGTTGCATCATGCAGTCTTGCAGACAGGACAGGAGGGACG ACGGCCGTGCCGTCACATTAAAATGCTCGTCATTGTTTGGTTTTGGTTGGCTGCAAATTA AAATGCTCCCAAAGAATAGGATTGCGAGGAGGATGGATGGATGGTGCTGTACATGGGCAA ACACTCGGGATAATTGTCATTTTTTTGCCTTTTTTATANTAGTCGCTCGAACCACTAGAC GGCCTTGTAGAGAGCTGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8406#0      GGCAAATCACATCCATCCATCCATTGCCATTGCCACCCATGGCGCCACTCCCCGCCGCCG 60
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      CCGCCGCGCCGGCCTTCCTCTTCCTCTCCCCTCCCGGCAAACTGCCCGGCGGCAAACCCA 120
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      GGCTGAAACCCTCCTGTGCCGCCTCCACCTCGTCTTCGTCGTCGTCGTCACCCCCGCTCC 180
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TCCGCGCCATCCGCGCCCTCCCCGACGCTGCCGACCTCGCCCCCACCCTCCACGACTTCT 240
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TCCCCCCGGCCTCGCCGCCCTCCACCTCCGACGCGCTCCTCCTCCTCAACTACCTCCACC 300
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      CCTCCTGGCGCAAGTCCCTCTCCCTCCTCTGCTGGCTCCGCGCCCTCCCCGATGGCGCCT 360
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TCCCACTTGACACCATCGTCTTCAATGTCGCCCTCAAGTCCCTCCGCGCCGCCCGCCAGT 420
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      GGCCCCAGGCCGAGCGCCTCGCCCTCGACATGCTCGCCTCCGGTGTCCCCCTCGACAACA 480
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TCACCTACTCCACCCTCATCACCGCCGCCCGCCGCTGCCGCCAGTTCGACAAGGCCGTCG 540
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      AGTGGTTCGAGCGCATGTACGCCTCCGACGGCGTCCTCCCCGACGAGGTCACCTACTCAG 600
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      CCATCCTCGACGTCTACGCGCAGCTCGGCATGAAGGAGGAGGTCCTCGCGCTCTTCGACC 660
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      GCGCGCGCGGCAGCGGCTGGAAGCCCGACCATGTCGCTTTCGCCGTCCTCGCCAAGATGT 720
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TCGGCGAGGCCGGCGACTACGACGGCATCCAGTTCGTCTTCAAGGAGATGCGCGAGGTAG 780
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      GCATCAAGCCCAACATCTTCGTCTACAACGCGCTGCTGGAGGCGCTGGGCAAGACCGGCA 840
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      AGCCAGGCCTGGCACGCAACCTGTTCGAGGAAATGACGGCCGAGGGCGTCGAGCCCAACG 900
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      CGCGCACGCTCACGGCGCTCGCAAAGATCTACGGGAGGGCGCGCTGGGGGCGCGACGCGC 960
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TGCAGCTCTGGGAGCAGATGCGGGAGAAGAAGCTGCCCGCCGACAACATCCTCTGCAACA 1020
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      CGCTTCTGAGCATGTGTGCCGACGTGGGGCTGGTGGGCGAGGCCGAGCAGCTCTTCAGCG 1080
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      AGATGAAGGACCCGGACCTGGGCGACGTGCCGAAGCCAGACAAGTGGAGCTACACGGCCA 1140
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TGATCAACATCTATGGGAGCAGCGGGGATGCGGACCGCGCACTCCAGCTGTTTGCGGAAA 1200
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TGGTGGAGAGCGGAATCGAGCCCAACATCATGAGCTATACCATTGTGATCCAGTGCCTGG 1260
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      GAAAGGCAGGGAGGATACAGGAGGCGGTGGACGTGCTAGAGGCTGGGATGGCCAAGGGCC 1320
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TCAAGCCCGATGACCGACTCTGCGGGTGCCTGCTCTCCGTGGTCGCGCTGAGCAGCGGGG 1380
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      ACGAGACGGAGGTGATTCTGGCTTGCCTGGAGAAGGTGAGGAGTAATCTGGTGAAGCTGA 1440
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TCAGGATGCTCGGGGATGCCCGGGTGGGAGTGGAGGACCTGAGGGTGGAGCTGAAGGGCA 1500
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      TACTGAACAGCGCGGCCCCTGAGGTGCGGCGGCCCTACTGCAACTGCCTGATCGACATAT 1560
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      GCCGCAACCATGGGTACCCTAGTGAGAGGGCAGTGGAGCTGTTCCGCCTCGCCCGGCACT 1620
consensus_8406#1      ------------------------------CAGTGGAGCTGTTCCGCCTCGCCCGGCAGT 30
                                                    **************************** *

consensus_8406#0      ATGGCCTGTACTCGAAGATCCATACGAGGAAGGAGGAGGAGTGGTCGCTGGACCTGCGGT 1680
consensus_8406#1      ATGGCCTGTACTCGAAGATCCATACGAGGAAGGAGGAGGAGTGGTCGCTGGACCTGCGGT 90
                      ************************************************************

consensus_8406#0      CGCTGTCGGTAGGCGCGGCCAAGACGGCGTTCGACGACTGGATGAAGACCATCCGGGAAC 1740
consensus_8406#1      CGCTGTCGGTAGGGGCGGCCAAGACGGCGTTCGACGACTGGATGAAGACCATCCGGGAAC 150
                      ************* **********************************************

consensus_8406#0      ACGAGGAGGAGGAGGCTCTGCCACAGACGTTTAGCGTGTACACCGGCTCCAGCACCCACA 1800
consensus_8406#1      ACGAGGAGGAGGAGGCTTTGCCACAGACGTTTAGCGTGTACACCGGCTCCAGCACCCACA 210
                      ***************** ******************************************

consensus_8406#0      AATTCGCGCAGGGGCTGGCGACCGCGGTGGCCTCTCATCTTGAGCAGGTGGGGGCGCCGT 1860
consensus_8406#1      AATTCGCGCAGGGGCTGGCGACCGCGGTGGCCTCTCATCTTGAGCAGGTGGGGGCGCCGT 270
                      ************************************************************

consensus_8406#0      TCCGTGCCAGCGACTCCCAGCTTGGGAGCTTCATCAGCAGCAGGGATGATCTGCTCTCCT 1920
consensus_8406#1      TCCGTGCCAGCGACTCCCAGCTTGGGAGCTTCATCAGCAGCAGGGATGATCTGCTCTCCT 330
                      ************************************************************

consensus_8406#0      GGTTGCACACCACCATGTCATCGCCGGATGTTGCCGTATGATCGCCGGTTGGTTGCATCA 1980
consensus_8406#1      GGTTGCACACCACCATGTCATCGCCGGATGTTGCCGTATGATCGCCGGTTGGTTGCATCA 390
                      ************************************************************

consensus_8406#0      TGCAGTCTTGCAGACAGGACAGGAGGGACGACGGCCGTGCCGTCACATTAAAATGCTCGT 2040
consensus_8406#1      TGCAGTCTTGCAGACAGGACAGGAGGGACGACGGCCGTGCCGTCACATTAAAATGCTCGT 450
                      ************************************************************

consensus_8406#0      CATTGTTTGGTTTTGGTTGGCTGCAAATTAAAATGCTCCCAAAGAATAGGATTGCGAGGA 2100
consensus_8406#1      CATTGTTTGGTTTTGGTTGGCTGCAAATTAAAATGCTCCCAAAGAATAGGATTGCGAGGA 510
                      ************************************************************

consensus_8406#0      GGATGGATGGATGGTGCTGTACATGCGCAAACACTCCGGATAATTGTCATTTCTCTGCCT 2160
consensus_8406#1      GGATGGATGGATGGTGCTGTACATGGGCAAACACTCGGGATAATTGTCATTTTTTTGCCT 570
                      ************************* ********** *************** * *****

consensus_8406#0      TTTTTATACTAGTCCAGTTTGTAGGAAGCTGGACAAGTGATAAGCAGATAAGCTAGTACT 2220
consensus_8406#1      TTTTTATANTAGTCGCTCGAACCACTAGACGGCCTTGTAGAGAGCTGGC----------- 619
                      ******** *****            **  ** *  **    *** *             

consensus_8406#0      AGTGTGGTTTTCTCACCTCTTTTATTTATACTCCTACTAGATTACTCACAGTTGTTAGGG 2280
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      ATGAGGTGAGGGCACTCTGAAGATGAGAGAGAGCTCACAGTTTATGGTTTTTGTACGACG 2340
consensus_8406#1      ------------------------------------------------------------
                                                                                  

consensus_8406#0      AAATTATTATTACATATCTGGGTCTGGGTGCCAGC 2375
consensus_8406#1      -----------------------------------
                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)