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Oryza sativa
cluster # 8409 cluster # 8409       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8409#0 length = 1504 sequences # 5  

consensusID : consensus_8409#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1504
fasta sequence
                              [AGTGCTGCAGATCAAAGAGGAAGAAACATATACGTACTACGTAGCCCATATACATCGGGCTGCAGCAAGGGAAGAAAATGAGAAGCACGCTTCAATATTCTTATGAAACGGTTGAGATTCGTTATGAAGGCAGCAGTGACTTCTTCACCTCGGCCTGGTCAAATGCGATGGACTTGTTGAAGAGCCCGAGGGGAACGGTGATCCGTATTGAGGTTCTTGTGGTGTTGGCTGCTTGTATGCTTATATTCCTCGCCGTGTTTGGGTTTCTCCGACGGCGATGCACAAATCCCTTGTTCCAGACGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAATGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCCTTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGAGACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCATCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGTTCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGATGGTTGCCGATTACATGCATGATGAGGAGCACGCCAATCATCCAATACGGGAGTACGACGCAGGCAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTGAAGCTGCGACATCATATGCAGCACGCGTAACAGATGATGCCCAGATCATTTGCATCGACGACATATGGCTCCGCAGCGACAAGTCACTGAGCACGGACCTGAAGGATGCCTGTCTCTCCTTCTCTCTATTCCATTTGTTGCGGAGGCGCTTCTTTGGGTTCACATGTGCTGAATCTGCACACCCCAAGACTAGTGATTTCGTCTTCAAGGGCCTGCTGCAGTTGAAGAATGGCAGCACAGGCACTGTAGACTACATCAGAGCTTTCAAGGTCATCGAGGTTGAGTTGGCTTTTATGTATGACTTCTTCTTCACAAAGTATGCTCTCATCTACTACAGTTCAACCTCTGCTGCAGTTTGGTCATTGGTTTCAGCTGCCTTCACAGTTTTAACAGCATTTCTCACAACCAAACTCCATTGGCTTCAGGGTGGATCCACTGTTGTGGTTCAGGGTGGACCCACTGTTGTGGGCGACAACAAAGCTGACATTTTTATCACCATGCTCCTGCTTGTATCTATTGCTTTGCTAGAGCTGCTTCAGCCACTGCTTTACTGGACCACCATTTGGGGCAGAGTATCTTTTGTTTGTCAGTATATCAGACAACAACAGCCATTGCGGCATGGCTTCAGCTGCTGCATGATGAGAGTTAAGGAGCTTCTCACCAAGATCGGTCTGCGTGTGTCGTCAAATGGGAGCTACTGGCAGGACATGCTTGGGCAATACTC]

[+] EMBL CB635753             [AGTGCTGCAGATCAAAGAGGAAGAAACATATACGTACTACGTAGCCCATATACATCGGGCTGCAGCAAGGGAAGAAAATGAGAAGCACGCTTCAATATTCTTATGAAACGGTTGAGATTCGTTATGAAGGCAGCAGTGACTTCTTCACCTCGGCCTGGTCAAATGCGATGGACTTGTTGAAGAGCCCGAGGGGAACGGTGATCCGTATTGAGGTTCTTGTGGTGTTGGCTGCTTGTATGCTTATATTCCTCGCCGTGTTTGGGTTTCTCCGACGGCGATGCACAAATCCCTTGTTCCAGACGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAATGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCCTTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGAGACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCATCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGTTCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGATGGTTGCCGATTACATGCATGATGAGGAGCACGCCAATCATCCAATACGGGAGTACGACGCAGGCAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTGAAGCTGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB633210             [AGTGCTGCAGATCAAAGAGGAAGAAACATATACGTACTACGTAGCCCATATACATCGGGCTGCAGCAAGGGAAGAAAATGAGAAGCACGCTTCAATATTCTTATGAAACGGTTGAGATTCGTTATGAAGGCAGCAGTGACTTCTTCACCTCGGCCTGGTCAAATGCGATGGACTTGTTGAAGAGCCCGAGGGGAACGGTGATCCGTATTGAGGTTCTTGTGGTGTTGGCTGCTTGTATGCTTATATTCCTCGCCGTGTTTGGGTTTCTCCGACGGCGATGCACAAATCCCTTGTTCCAGACGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAATGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCCTTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGAGACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCATCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGTTCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB631459             [                                                                   AGGGCCTAAAATGAGAAGCACGCTTCAATATTCTTATGAAACGGTTGAGATTCGTTATGAAGGCAGCAGTGACTTCTTCACCTCGGCCTGGTCAAATGCGATGGACTTGTTGAAGAGCCCGAGGGGAACGGTGATCCGTATTGAGGTTCTTGTGGTGTTGGCTGCTTGTATGCTTATATTCCTCGCCGTGTTTGGGTTTCTCCGACGGCGATGCACAAATCCCTTGTTCCAGACGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAATGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCCTTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGAGACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCATCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGTTCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGATGGTTGCCGATTACATGCATGATGAGGAGCACGCCAATCATCCAATACGGGAGTACGACGCAGGCAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTGAAGCTGCGACATCATATGCAGCACGCGTAACAGATGATGCCCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB629771             [                                                                                                                                                                                                                                                                       aggCTCCGACGGCGATGCACAAATCCCTTGCCCCAGACGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAATGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCCTTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGAGACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCATCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGTTCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGATGGTTGCCGATTACATGCATGATGAGGAGCACGCCAATCATCCAATACGGGAGTACGACGCAGGCAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTGAAGCTGCGACATCATATGCAGCACGCGTAACAGATGATGCCCAGATCATTTGCATCGACGACATATGGCTCCGCAGCGACAAGTCACTGAGCACGGACCTGAAGGATGCCTGTCTCTCCTTCTCTCTATTCCATTTGTTGCGGAGGCGCTTCTTTGGGTTCACATGTGCTGAATCTGCACACCCCAAGACTAGTGATTTCGTCTTCAAGGGCCTGCTGCAGTTGAAGAATGGCAGCACAGGCACTGTAGACTACATCAGAGCTTTCAAGGTCATCGAGGTTGAGTTGGCTTTTATGTATGACTTCTTCTTCACAAAGTATGCTCTCATCTACTACAGTTC                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB633323             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACGCACGTAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTGAAGCTGCGACATCATATGCAGCACGCGTAACAGATGATGCCCAGATCATTTGCATCGACGACATATGGCTCCGCAGCGACAAGTCACTGAGCACGGACCTGAAGGATGCCTGTCTCTCCTTCTCTCTATTCCATTTGTTGCGGAGGCGCTTCTTTGGGTTCACATGTGCTGAATCTGCACACCCCAAGACTAGTGATTTCGTCTTCAAGGGCCTGCTGCAGTTGAAGAATGGCAGCACAGGCACTGTAGACTACATCAGAGCTTTCAAGGTCATCGAGGTTGAGTTGGCTTTTATGTATGACTTCTTCTTCACAAAGTATGCTCTCATCTACTACAGTTCAACCTCTGCTGCAGTTTGGTCATTGGTTTCAGCTGCCTTCACAGTTTTAACAGCATTTCTCACAACCAAACTCCATTGGCTTCAGGGTGGATCCACTGTTGTGGTTCAGGGTGGACCCACTGTTGTGGGCGACAACAAAGCTGACATTTTTATCACCATGCTCCTGCTTGTATCTATTGCTTTGCTAGAGCTGCTTCAGCCACTGCTTTACTGGACCACCATTTGGGGCAGAGTATCTTTTGTTTGTCAGTATATCAGACAACAACAGCCATTGCGGCATGGCTTCAGCTGCTGCATGATGAGAGTTAAGGAGCTTCTCACCAAGATCGGTCTGCGTGTGTCGTCAAATGGGAGCTACTGGCAGGACATGCTTGGGCAATACTC]


>consensus_8409#0 AGTGCTGCAGATCAAAGAGGAAGAAACATATACGTACTACGTAGCCCATATACATCGGGC TGCAGCAAGGGAAGAAAATGAGAAGCACGCTTCAATATTCTTATGAAACGGTTGAGATTC GTTATGAAGGCAGCAGTGACTTCTTCACCTCGGCCTGGTCAAATGCGATGGACTTGTTGA AGAGCCCGAGGGGAACGGTGATCCGTATTGAGGTTCTTGTGGTGTTGGCTGCTTGTATGC TTATATTCCTCGCCGTGTTTGGGTTTCTCCGACGGCGATGCACAAATCCCTTGTTCCAGA CGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAA TGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCC TTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGA GACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCA TCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGT TCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGATGG TTGCCGATTACATGCATGATGAGGAGCACGCCAATCATCCAATACGGGAGTACGACGCAG GCAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTG AAGCTGCGACATCATATGCAGCACGCGTAACAGATGATGCCCAGATCATTTGCATCGACG ACATATGGCTCCGCAGCGACAAGTCACTGAGCACGGACCTGAAGGATGCCTGTCTCTCCT TCTCTCTATTCCATTTGTTGCGGAGGCGCTTCTTTGGGTTCACATGTGCTGAATCTGCAC ACCCCAAGACTAGTGATTTCGTCTTCAAGGGCCTGCTGCAGTTGAAGAATGGCAGCACAG GCACTGTAGACTACATCAGAGCTTTCAAGGTCATCGAGGTTGAGTTGGCTTTTATGTATG ACTTCTTCTTCACAAAGTATGCTCTCATCTACTACAGTTCAACCTCTGCTGCAGTTTGGT CATTGGTTTCAGCTGCCTTCACAGTTTTAACAGCATTTCTCACAACCAAACTCCATTGGC TTCAGGGTGGATCCACTGTTGTGGTTCAGGGTGGACCCACTGTTGTGGGCGACAACAAAG CTGACATTTTTATCACCATGCTCCTGCTTGTATCTATTGCTTTGCTAGAGCTGCTTCAGC CACTGCTTTACTGGACCACCATTTGGGGCAGAGTATCTTTTGTTTGTCAGTATATCAGAC AACAACAGCCATTGCGGCATGGCTTCAGCTGCTGCATGATGAGAGTTAAGGAGCTTCTCA CCAAGATCGGTCTGCGTGTGTCGTCAAATGGGAGCTACTGGCAGGACATGCTTGGGCAAT ACTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)