These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8409#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1504 fasta sequence [AGTGCTGCAGATCAAAGAGGAAGAAACATATACGTACTACGTAGCCCATATACATCGGGCTGCAGCAAGGGAAGAAAATGAGAAGCACGCTTCAATATTCTTATGAAACGGTTGAGATTCGTTATGAAGGCAGCAGTGACTTCTTCACCTCGGCCTGGTCAAATGCGATGGACTTGTTGAAGAGCCCGAGGGGAACGGTGATCCGTATTGAGGTTCTTGTGGTGTTGGCTGCTTGTATGCTTATATTCCTCGCCGTGTTTGGGTTTCTCCGACGGCGATGCACAAATCCCTTGTTCCAGACGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAATGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCCTTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGAGACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCATCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGTTCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGATGGTTGCCGATTACATGCATGATGAGGAGCACGCCAATCATCCAATACGGGAGTACGACGCAGGCAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTGAAGCTGCGACATCATATGCAGCACGCGTAACAGATGATGCCCAGATCATTTGCATCGACGACATATGGCTCCGCAGCGACAAGTCACTGAGCACGGACCTGAAGGATGCCTGTCTCTCCTTCTCTCTATTCCATTTGTTGCGGAGGCGCTTCTTTGGGTTCACATGTGCTGAATCTGCACACCCCAAGACTAGTGATTTCGTCTTCAAGGGCCTGCTGCAGTTGAAGAATGGCAGCACAGGCACTGTAGACTACATCAGAGCTTTCAAGGTCATCGAGGTTGAGTTGGCTTTTATGTATGACTTCTTCTTCACAAAGTATGCTCTCATCTACTACAGTTCAACCTCTGCTGCAGTTTGGTCATTGGTTTCAGCTGCCTTCACAGTTTTAACAGCATTTCTCACAACCAAACTCCATTGGCTTCAGGGTGGATCCACTGTTGTGGTTCAGGGTGGACCCACTGTTGTGGGCGACAACAAAGCTGACATTTTTATCACCATGCTCCTGCTTGTATCTATTGCTTTGCTAGAGCTGCTTCAGCCACTGCTTTACTGGACCACCATTTGGGGCAGAGTATCTTTTGTTTGTCAGTATATCAGACAACAACAGCCATTGCGGCATGGCTTCAGCTGCTGCATGATGAGAGTTAAGGAGCTTCTCACCAAGATCGGTCTGCGTGTGTCGTCAAATGGGAGCTACTGGCAGGACATGCTTGGGCAATACTC] [+] EMBL CB635753 [AGTGCTGCAGATCAAAGAGGAAGAAACATATACGTACTACGTAGCCCATATACATCGGGCTGCAGCAAGGGAAGAAAATGAGAAGCACGCTTCAATATTCTTATGAAACGGTTGAGATTCGTTATGAAGGCAGCAGTGACTTCTTCACCTCGGCCTGGTCAAATGCGATGGACTTGTTGAAGAGCCCGAGGGGAACGGTGATCCGTATTGAGGTTCTTGTGGTGTTGGCTGCTTGTATGCTTATATTCCTCGCCGTGTTTGGGTTTCTCCGACGGCGATGCACAAATCCCTTGTTCCAGACGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAATGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCCTTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGAGACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCATCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGTTCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGATGGTTGCCGATTACATGCATGATGAGGAGCACGCCAATCATCCAATACGGGAGTACGACGCAGGCAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTGAAGCTGCGA ] [+] EMBL CB633210 [AGTGCTGCAGATCAAAGAGGAAGAAACATATACGTACTACGTAGCCCATATACATCGGGCTGCAGCAAGGGAAGAAAATGAGAAGCACGCTTCAATATTCTTATGAAACGGTTGAGATTCGTTATGAAGGCAGCAGTGACTTCTTCACCTCGGCCTGGTCAAATGCGATGGACTTGTTGAAGAGCCCGAGGGGAACGGTGATCCGTATTGAGGTTCTTGTGGTGTTGGCTGCTTGTATGCTTATATTCCTCGCCGTGTTTGGGTTTCTCCGACGGCGATGCACAAATCCCTTGTTCCAGACGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAATGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCCTTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGAGACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCATCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGTTCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGA ] [+] EMBL CB631459 [ AGGGCCTAAAATGAGAAGCACGCTTCAATATTCTTATGAAACGGTTGAGATTCGTTATGAAGGCAGCAGTGACTTCTTCACCTCGGCCTGGTCAAATGCGATGGACTTGTTGAAGAGCCCGAGGGGAACGGTGATCCGTATTGAGGTTCTTGTGGTGTTGGCTGCTTGTATGCTTATATTCCTCGCCGTGTTTGGGTTTCTCCGACGGCGATGCACAAATCCCTTGTTCCAGACGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAATGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCCTTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGAGACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCATCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGTTCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGATGGTTGCCGATTACATGCATGATGAGGAGCACGCCAATCATCCAATACGGGAGTACGACGCAGGCAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTGAAGCTGCGACATCATATGCAGCACGCGTAACAGATGATGCCCAGA ] [+] EMBL CB629771 [ aggCTCCGACGGCGATGCACAAATCCCTTGCCCCAGACGGCTGTCATGGGCTCCTATGTCCTGTCCTCCTCCCTGGTAACATACACGCTTGGTTCAATGCAGTCTTCTGCTGCCAAGAGTGGCATGTACCCCATTTGGGCCTTGTCACTCTTTATCCTTTCTGGGTGCGCCGATTCAGTCACGGCATATAGCCTCGAAGACAACAATCAGATACAGAGACAGACATACAATGCTTTCCTCTACCATGCTTACGTCCTCCTGATATCTGCGACCATCATCACGCAAGGTGCCGGCGCAGTACTACTTATTTATCCGGCGTACGTTGCCTTATACAAGTTCCTCCACAGGACTATGGCATCTCAGCTGGCAAGCGTGTCGTGGAACCTGAACAAGATGGTTGCCGATTACATGCATGATGAGGAGCACGCCAATCATCCAATACGGGAGTACGACGCAGGCAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTGAAGCTGCGACATCATATGCAGCACGCGTAACAGATGATGCCCAGATCATTTGCATCGACGACATATGGCTCCGCAGCGACAAGTCACTGAGCACGGACCTGAAGGATGCCTGTCTCTCCTTCTCTCTATTCCATTTGTTGCGGAGGCGCTTCTTTGGGTTCACATGTGCTGAATCTGCACACCCCAAGACTAGTGATTTCGTCTTCAAGGGCCTGCTGCAGTTGAAGAATGGCAGCACAGGCACTGTAGACTACATCAGAGCTTTCAAGGTCATCGAGGTTGAGTTGGCTTTTATGTATGACTTCTTCTTCACAAAGTATGCTCTCATCTACTACAGTTC ] [+] EMBL CB633323 [ ACGCACGTAGCATGAAGGGTTACCGTTACCTAGTCTACTGGCGATTGGACAAGACGTCCAAGATTGAAGCTGCGACATCATATGCAGCACGCGTAACAGATGATGCCCAGATCATTTGCATCGACGACATATGGCTCCGCAGCGACAAGTCACTGAGCACGGACCTGAAGGATGCCTGTCTCTCCTTCTCTCTATTCCATTTGTTGCGGAGGCGCTTCTTTGGGTTCACATGTGCTGAATCTGCACACCCCAAGACTAGTGATTTCGTCTTCAAGGGCCTGCTGCAGTTGAAGAATGGCAGCACAGGCACTGTAGACTACATCAGAGCTTTCAAGGTCATCGAGGTTGAGTTGGCTTTTATGTATGACTTCTTCTTCACAAAGTATGCTCTCATCTACTACAGTTCAACCTCTGCTGCAGTTTGGTCATTGGTTTCAGCTGCCTTCACAGTTTTAACAGCATTTCTCACAACCAAACTCCATTGGCTTCAGGGTGGATCCACTGTTGTGGTTCAGGGTGGACCCACTGTTGTGGGCGACAACAAAGCTGACATTTTTATCACCATGCTCCTGCTTGTATCTATTGCTTTGCTAGAGCTGCTTCAGCCACTGCTTTACTGGACCACCATTTGGGGCAGAGTATCTTTTGTTTGTCAGTATATCAGACAACAACAGCCATTGCGGCATGGCTTCAGCTGCTGCATGATGAGAGTTAAGGAGCTTCTCACCAAGATCGGTCTGCGTGTGTCGTCAAATGGGAGCTACTGGCAGGACATGCTTGGGCAATACTC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||