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Oryza sativa
cluster # 8410 cluster # 8410       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8410#0 length = 1827 sequences # 3  
consensus_8410#1 length = 653 sequences # 1  
consensus_8410#2 length = 522 sequences # 1  

consensusID : consensus_8410#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1827
fasta sequence
                              [CAGGTTATTCATCATTATCCACAGATATGTTTTTTCTTCTTTGCAAATATTCTCCTTTTCCCAGAGCCGCATTGGACTCCAATACAAGAGTCAGAGGGTGGAAGCAAAGAAATCGTAGTAAATGATCTCTACTGGCCTCTGTAGCCAAAGGATTCAGCAAATCTGCGAAGACCTCACGAGTCAGGAGCTTTCCAGGAGTTGCAACCTGCAGCTGCTGCTTACTTTGGTGAGTTGGAGAAGGCCCTTATCCATGGCACCAGTGCTGGTGCTGGTGTCGATCATGGCATGATCCAAAGTGACGCGTACACAGAGTCAGCAGGATATCTTGCAGCTAGGCCCCCCACACTGGAAATCTTCCCTTCATGGCCAATGAGTCATCTACAGGAGCCATACAGTAACTCGCAGTCAGTAGGGAGCACCACTGACTCTAGCTCAGCTCAGAACACAATGTCACAGGCCGAGTTGGTGTCCCCAGCGAGCATGAGGTCCGACTCTGGGCAGGAACAGCAACAACAGGAGGTATTGATGGTGACCATTGATGATTACAACTACAAACAAGGACTTGGAGCAGCAATAGCTACTGCACCAAGCTTTCAGCAACATGCAGGAGGCCTAGACATGAGGAAGCATGGATCCACTAGAAAAGACGGAAAACTGTTAGATGCCAAGACTGAAAGGCGATTGGCTCAGAACAGAGAAGCTGCAAGAAAGAGCAGGCTGAGGAAAAAGGCTTATGTGCAGCAACTTGAGACTAGCCGCATAAGGCTTCAGCAAATCGAGCAAGAGCTTCAGAGAGCACGCTCACAGGGCTTGTTTCCTGGAGGATGCAGTGCACCTGGAGATATGAGCTCGGGTGCTGTAATGTTTGACATGGATTACACCCGATGGATAGACGACGACAGCAAATGCATGGCAGAGCTCCAGGGCGCGCTACAGGCCCAGCTCCCCGACGGAAACCTTGGTGCCATTGTGGAAGAATGCATGCGCCACTACGACGAGCTCTTCCACCTTAGGGCCGTGCTCGCCAGCTCCGACGTGTTCCACCTGATGACTGGCATGTGGGCGGCGCCGGCCGAGCGGTGCTTCCTCTGGATGGCCGGTTTCCGGCCATCAGAAATTCTCAAAATGCTGATACCTCAGCTCGATCCACTGACGGAGCAGCAGCTGATGGGGATGTGCAGCCTGCAGCAGTCGTCGGAGCAGACCGAGGAGGCGCTCGCGCAGGGGCTTCACCAGCTGCACCAGTCACTGGCCGACGCGGTGGGCGGCGGTCCTCTCAACGACGGCGCAGATGTTGCCAACTACACCGGCCTCATGGCCCTAGCACTTGGCAGGCTTGAGAACCTCGAGAGCTTTTATCGTCAGGCTGATAATCTGAGGCAGGAAACGTTGCACCACATGCGGCGAATTCTCACAACCAGACAGACAGCTCGGTGTTTTCTTTCCATTGGAGAGTATAATCGCCGTCTCCGTGCTCTCAGCTCCCTCTGGGCTTCACGTCCTCGCGAAAACTTCATTGCGACAGAGAATGTCAGCCCTACAGGAACTGAATTTCAGGTTATTCAGCAATCTCAGCAAAATCAATTCTCCGGTTTCTGAGACCTCTTCTCCAGGAGGGTACAAATTCTGCATTTCTGCCAGTAGCAAGGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAATGTAATGTTCTATCATTATGATATTGAGAAAGGAACATCACTAGGAAAAAAAAAGATGGCAGAAAGTTGGAAACTGGGGCGGCTCGATCACTTGCTATGTTCCAATGGCTCTTGAATTGAATGAAGGGTTAGCTCTAAGCAAAAA]

[+] EMBL AK109520             [CAGGTTATTCATCATTATCCACAGATATGTTTTTTCTTCTTTGCAAATATTCTCCTTTTCCCAGAGCCGCATTGGACTCCAATACAAGAGTCAGAGGGTGGAAGCAAAGAAATCGTAGTAAATGATCTCTACTGGCCTCTGTAGCCAAAGGATTCAGCAAATCTGCGAAGACCTCACGAGTCAGGAGCTTTCCAGGAGTTGCAACCTGCAGCTGCTGCTTACTTTGGTGAGTTGGAGAAGGCCCTTATCCATGGCACCAGTGCTGGTGCTGGTGTCGATCATGGCATGATCCAAAGTGACGCGTACACAGAGTCAGCAGGATATCTTGCAGCTAGGCCCCCCACACTGGAAATCTTCCCTTCATGGCCAATGAGTCATCTACAGGAGCCATACAGTAACTCGCAGTCAGTAGGGAGCACCACTGACTCTAGCTCAGCTCAGAACACAATGTCACAGGCCGAGTTGGTGTCCCCAGCGAGCATGAGGTCCGACTCTGGGCAGGAACAGCAACAACAGGAGGTATTGATGGTGACCATTGATGATTACAACTACAAACAAGGACTTGGAGCAGCAATAGCTACTGCACCAAGCTTTCAGCAACATGCAGGAGGCCTAGACATGAGGAAGCATGGATCCACTAGAAAAGACGGAAAACTGTTAGATGCCAAGACTGAAAGGCGATTGGCTCAGAACAGAGAAGCTGCAAGAAAGAGCAGGCTGAGGAAAAAGGCTTATGTGCAGCAACTTGAGACTAGCCGCATAAGGCTTCAGCAAATCGAGCAAGAGCTTCAGAGAGCACGCTCACAGGGCTTGTTTCCTGGAGGATGCAGTGCACCTGGAGATATGAGCTCGGGTGCTGTAATGTTTGACATGGATTACACCCGATGGATAGACGACGACAGCAAATGCATGGCAGAGCTCCAGGGCGCGCTACAGGCCCAGCTCCCCGACGGAAACCTTGGTGCCATTGTGGAAGAATGCATGCGCCACTACGACGAGCTCTTCCACCTTAGGGCCGTGCTCGCCAGCTCCGACGTGTTCCACCTGATGACTGGCATGTGGGCGGCGCCGGCCGAGCGGTGCTTCCTCTGGATGGCCGGTTTCCGGCCATCAGAAATTCTCAAAATGCTGATACCTCAGCTCGATCCACTGACGGAGCAGCAGCTGATGGGGATGTGCAGCCTGCAGCAGTCGTCGGAGCAGACCGAGGAGGCGCTCGCGCAGGGGCTTCACCAGCTGCACCAGTCACTGGCCGACGCGGTGGGCGGCGGTCCTCTCAACGACGGCGCAGATGTTGCCAACTACACCGGCCTCATGGCCCTAGCACTTGGCAGGCTTGAGAACCTCGAGAGCTTTTATCGTCAGGCTGATAATCTGAGGCAGGAAACGTTGCACCACATGCGGCGAATTCTCACAACCAGACAGACAGCTCGGTGTTTTCTTTCCATTGGAGAGTATAATCGCCGTCTCCGTGCTCTCAGCTCCCTCTGGGCTTCACGTCCTCGCGAAAACTTCATTGCGACAGAGAATGTCAGCCCTACAGGAACTGAATTTCAGGTTATTCAGCAATCTCAGCAAAATCAATTCTCCGGTTTCTGAGACCTCTTCTCCAGGAGGGTACAAATTCTGCATTTCTGCCAGTAGCAAGGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAATGTAATGTTCTATCATTATGATATTGAGAAAGGAACATCACTAGGAAAAAAAAAGATGGCAGAAAGTTGGAAACTGGGGCGGCTCGATCACTTGCTATGTTCCAATGGCTCTTGAATTGAATGAAGGGTT               ]
[+] EMBL CK085249             [                                                                                             GAGGGTGGAAGCAAAGAAATCGTAGTAAATGATCTCTACTGGCCTCTGTAGCCAAAGGATTCAGCAAATCTGCGAAGACCTCACGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CF278606             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCTCGCGAAAACTTCATTGCGACAGAGAATGTCAGCCCTACAGGAACTGAATTTCAGGTTATTCAGCAATCTCAGCAAAATCAATTCTCCGGTTTCTGAGACCTCTTCTCCAGGAGGGTACAAATTCTGCATTTCTGCCAGTAGCAAGGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAATGTAATGTTCTATCATTATGATATTGAGAAAGGAACATCACTAGGAAAAAAAAAGATGGCAGAAAGTTGGAAACTGGGGCGGCTCGATCACTTGCTATGTTCCAATGGCTCTTGAATTGAATGAAGGGTTAGCTCTAAGCAAAAA]


>consensus_8410#0 CAGGTTATTCATCATTATCCACAGATATGTTTTTTCTTCTTTGCAAATATTCTCCTTTTC CCAGAGCCGCATTGGACTCCAATACAAGAGTCAGAGGGTGGAAGCAAAGAAATCGTAGTA AATGATCTCTACTGGCCTCTGTAGCCAAAGGATTCAGCAAATCTGCGAAGACCTCACGAG TCAGGAGCTTTCCAGGAGTTGCAACCTGCAGCTGCTGCTTACTTTGGTGAGTTGGAGAAG GCCCTTATCCATGGCACCAGTGCTGGTGCTGGTGTCGATCATGGCATGATCCAAAGTGAC GCGTACACAGAGTCAGCAGGATATCTTGCAGCTAGGCCCCCCACACTGGAAATCTTCCCT TCATGGCCAATGAGTCATCTACAGGAGCCATACAGTAACTCGCAGTCAGTAGGGAGCACC ACTGACTCTAGCTCAGCTCAGAACACAATGTCACAGGCCGAGTTGGTGTCCCCAGCGAGC ATGAGGTCCGACTCTGGGCAGGAACAGCAACAACAGGAGGTATTGATGGTGACCATTGAT GATTACAACTACAAACAAGGACTTGGAGCAGCAATAGCTACTGCACCAAGCTTTCAGCAA CATGCAGGAGGCCTAGACATGAGGAAGCATGGATCCACTAGAAAAGACGGAAAACTGTTA GATGCCAAGACTGAAAGGCGATTGGCTCAGAACAGAGAAGCTGCAAGAAAGAGCAGGCTG AGGAAAAAGGCTTATGTGCAGCAACTTGAGACTAGCCGCATAAGGCTTCAGCAAATCGAG CAAGAGCTTCAGAGAGCACGCTCACAGGGCTTGTTTCCTGGAGGATGCAGTGCACCTGGA GATATGAGCTCGGGTGCTGTAATGTTTGACATGGATTACACCCGATGGATAGACGACGAC AGCAAATGCATGGCAGAGCTCCAGGGCGCGCTACAGGCCCAGCTCCCCGACGGAAACCTT GGTGCCATTGTGGAAGAATGCATGCGCCACTACGACGAGCTCTTCCACCTTAGGGCCGTG CTCGCCAGCTCCGACGTGTTCCACCTGATGACTGGCATGTGGGCGGCGCCGGCCGAGCGG TGCTTCCTCTGGATGGCCGGTTTCCGGCCATCAGAAATTCTCAAAATGCTGATACCTCAG CTCGATCCACTGACGGAGCAGCAGCTGATGGGGATGTGCAGCCTGCAGCAGTCGTCGGAG CAGACCGAGGAGGCGCTCGCGCAGGGGCTTCACCAGCTGCACCAGTCACTGGCCGACGCG GTGGGCGGCGGTCCTCTCAACGACGGCGCAGATGTTGCCAACTACACCGGCCTCATGGCC CTAGCACTTGGCAGGCTTGAGAACCTCGAGAGCTTTTATCGTCAGGCTGATAATCTGAGG CAGGAAACGTTGCACCACATGCGGCGAATTCTCACAACCAGACAGACAGCTCGGTGTTTT CTTTCCATTGGAGAGTATAATCGCCGTCTCCGTGCTCTCAGCTCCCTCTGGGCTTCACGT CCTCGCGAAAACTTCATTGCGACAGAGAATGTCAGCCCTACAGGAACTGAATTTCAGGTT ATTCAGCAATCTCAGCAAAATCAATTCTCCGGTTTCTGAGACCTCTTCTCCAGGAGGGTA CAAATTCTGCATTTCTGCCAGTAGCAAGGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCG AATGTAATGTTCTATCATTATGATATTGAGAAAGGAACATCACTAGGAAAAAAAAAGATG GCAGAAAGTTGGAAACTGGGGCGGCTCGATCACTTGCTATGTTCCAATGGCTCTTGAATT GAATGAAGGGTTAGCTCTAAGCAAAAA



consensusID : consensus_8410#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 653
fasta sequence
                              [TGTGCAGCCTGCAGCCGTTGTCGGAGCAGACCGAGGAGGCGCTCGCGCAGGGGCTTCCCCAGCTGCACCAGTCCCTGGCCGACGCGGTGGGCGGCGGTCCTCTCAACGACGGCGCAGATGTTGCCAACTACACCGGCCTCATGGCCCTAGCACTTGGCAGGCTTGAGAACCTCGAGAGCTTTTATTGTCAGGCTGATAATTTGAGGCCGGAAACGTTGCCCCACCTGCGGCGAATTCTCACAACCAGACAGACAGCTCGGTGTTTTCTTTCCCTTGGAGAGTATAATTGCCGTTTCCGTGCTCTCAGCTCCCTTTGGGCTTCACGTCCTCGCGAAAACTTCATTGCGACAGAGAATGTCAGCCCTTCAGGAACTGAATTTCAGGTTATTCAGCCATCTCAGCAAAATCAATTTTCCGGTTTTTGAGACCTTTTCTCCAGGAGGGTACAAATTTTGCATTTTTGCCCGTAGCAAGGTGGAGAGAGAGAGAGAGAGCGAATGTAATGTTCTATCCTTTTGATATTGAGAAAGGAACCTCCCTAGGAAAAAAAAAAATGGCAGAAAGTTGGAAACTGGGGCGGCTCGATCCCCTGCTATGTTCCAATGGCTCTTGAATTGAATGAAGGGTTAGCTTTAAGAAAAAAAAAAAAAAAA]

[-] EMBL CA759679             [TGTGCAGCCTGCAGCCGTTGTCGGAGCAGACCGAGGAGGCGCTCGCGCAGGGGCTTCCCCAGCTGCACCAGTCCCTGGCCGACGCGGTGGGCGGCGGTCCTCTCAACGACGGCGCAGATGTTGCCAACTACACCGGCCTCATGGCCCTAGCACTTGGCAGGCTTGAGAACCTCGAGAGCTTTTATTGTCAGGCTGATAATTTGAGGCCGGAAACGTTGCCCCACCTGCGGCGAATTCTCACAACCAGACAGACAGCTCGGTGTTTTCTTTCCCTTGGAGAGTATAATTGCCGTTTCCGTGCTCTCAGCTCCCTTTGGGCTTCACGTCCTCGCGAAAACTTCATTGCGACAGAGAATGTCAGCCCTTCAGGAACTGAATTTCAGGTTATTCAGCCATCTCAGCAAAATCAATTTTCCGGTTTTTGAGACCTTTTCTCCAGGAGGGTACAAATTTTGCATTTTTGCCCGTAGCAAGGTGGAGAGAGAGAGAGAGAGCGAATGTAATGTTCTATCCTTTTGATATTGAGAAAGGAACCTCCCTAGGAAAAAAAAAAATGGCAGAAAGTTGGAAACTGGGGCGGCTCGATCCCCTGCTATGTTCCAATGGCTCTTGAATTGAATGAAGGGTTAGCTTTAAGAAAAAAAAAAAAAAAA]


>consensus_8410#1 TGTGCAGCCTGCAGCCGTTGTCGGAGCAGACCGAGGAGGCGCTCGCGCAGGGGCTTCCCC AGCTGCACCAGTCCCTGGCCGACGCGGTGGGCGGCGGTCCTCTCAACGACGGCGCAGATG TTGCCAACTACACCGGCCTCATGGCCCTAGCACTTGGCAGGCTTGAGAACCTCGAGAGCT TTTATTGTCAGGCTGATAATTTGAGGCCGGAAACGTTGCCCCACCTGCGGCGAATTCTCA CAACCAGACAGACAGCTCGGTGTTTTCTTTCCCTTGGAGAGTATAATTGCCGTTTCCGTG CTCTCAGCTCCCTTTGGGCTTCACGTCCTCGCGAAAACTTCATTGCGACAGAGAATGTCA GCCCTTCAGGAACTGAATTTCAGGTTATTCAGCCATCTCAGCAAAATCAATTTTCCGGTT TTTGAGACCTTTTCTCCAGGAGGGTACAAATTTTGCATTTTTGCCCGTAGCAAGGTGGAG AGAGAGAGAGAGAGCGAATGTAATGTTCTATCCTTTTGATATTGAGAAAGGAACCTCCCT AGGAAAAAAAAAAATGGCAGAAAGTTGGAAACTGGGGCGGCTCGATCCCCTGCTATGTTC CAATGGCTCTTGAATTGAATGAAGGGTTAGCTTTAAGAAAAAAAAAAAAAAAA



consensusID : consensus_8410#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 522
fasta sequence
                              [CAGTCATGAACACTGGTTACATACATGTAACTAGGAGGCAGCATAAATGCAGGATATCTTGCAGCTAGGCCCCCCACACTGGAAATCTTCCCTTCATGGCCAATGAGTCATCTACAGGAGCCATACAGTAACTCGCAGTCAGTAGGGAGCACCACTGACTCTAGCTCAGCTCAGAACACAATGTCACAGGCCGAGTTGGTGTCCCCAGCGAGCATGAGGTCCGACTCTGGGCAGGAACAGCAACAACAGGAGGTATTGATGGTGACCATTGATGATTACAACTACAAACAAGGACTTGGAGCAGCAATAGCTACTGCACCAAGCTTTCAGCAACATGCAGGAGGCCTAGACATGAGGAAGCATGGATCCACTAGAAAAGACGGAAAACTGTTAGATGCCAAGACTGAAAGGCGATTGGCTCAGAACAGAGAAGCTGCAAGAAAGAGCAGGCTGAGGAAAAAGGCTTATGTGCAGCAACTTGAGACTAGCCGCATAAGGCTTCAGCAAATCGAGCAAGAGCTT]

[+] EMBL CF278605             [CAGTCATGAACACTGGTTACATACATGTAACTAGGAGGCAGCATAAATGCAGGATATCTTGCAGCTAGGCCCCCCACACTGGAAATCTTCCCTTCATGGCCAATGAGTCATCTACAGGAGCCATACAGTAACTCGCAGTCAGTAGGGAGCACCACTGACTCTAGCTCAGCTCAGAACACAATGTCACAGGCCGAGTTGGTGTCCCCAGCGAGCATGAGGTCCGACTCTGGGCAGGAACAGCAACAACAGGAGGTATTGATGGTGACCATTGATGATTACAACTACAAACAAGGACTTGGAGCAGCAATAGCTACTGCACCAAGCTTTCAGCAACATGCAGGAGGCCTAGACATGAGGAAGCATGGATCCACTAGAAAAGACGGAAAACTGTTAGATGCCAAGACTGAAAGGCGATTGGCTCAGAACAGAGAAGCTGCAAGAAAGAGCAGGCTGAGGAAAAAGGCTTATGTGCAGCAACTTGAGACTAGCCGCATAAGGCTTCAGCAAATCGAGCAAGAGCTT]


>consensus_8410#2 CAGTCATGAACACTGGTTACATACATGTAACTAGGAGGCAGCATAAATGCAGGATATCTT GCAGCTAGGCCCCCCACACTGGAAATCTTCCCTTCATGGCCAATGAGTCATCTACAGGAG CCATACAGTAACTCGCAGTCAGTAGGGAGCACCACTGACTCTAGCTCAGCTCAGAACACA ATGTCACAGGCCGAGTTGGTGTCCCCAGCGAGCATGAGGTCCGACTCTGGGCAGGAACAG CAACAACAGGAGGTATTGATGGTGACCATTGATGATTACAACTACAAACAAGGACTTGGA GCAGCAATAGCTACTGCACCAAGCTTTCAGCAACATGCAGGAGGCCTAGACATGAGGAAG CATGGATCCACTAGAAAAGACGGAAAACTGTTAGATGCCAAGACTGAAAGGCGATTGGCT CAGAACAGAGAAGCTGCAAGAAAGAGCAGGCTGAGGAAAAAGGCTTATGTGCAGCAACTT GAGACTAGCCGCATAAGGCTTCAGCAAATCGAGCAAGAGCTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8410#0      CAGGTTATTCATCATTATCCACAGATATGTTTTTTCTTCTTTGCAAATATTCTCCTTTTC 60
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      CCAGAGCCGCATTGGACTCCAATACAAGAGTCAGAGGGTGGAAGCAAAGAAATCGTAGTA 120
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      AATGATCTCTACTGGCCTCTGTAGCCAAAGGATTCAGCAAATCTGCGAAGACCTCACGAG 180
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      TCAGGAGCTTTCCAGGAGTTGCAACCTGCAGCTGCTGCTTACTTTGGTGAGTTGGAGAAG 240
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      GCCCTTATCCATGGCACCAGTGCTGGTGCTGGTGTCGATCATGGCATGATCCAAAGTGAC 300
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      GCGTACACAGAGTCAGCAGGATATCTTGCAGCTAGGCCCCCCACACTGGAAATCTTCCCT 360
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      TCATGGCCAATGAGTCATCTACAGGAGCCATACAGTAACTCGCAGTCAGTAGGGAGCACC 420
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      ACTGACTCTAGCTCAGCTCAGAACACAATGTCACAGGCCGAGTTGGTGTCCCCAGCGAGC 480
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      ATGAGGTCCGACTCTGGGCAGGAACAGCAACAACAGGAGGTATTGATGGTGACCATTGAT 540
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      GATTACAACTACAAACAAGGACTTGGAGCAGCAATAGCTACTGCACCAAGCTTTCAGCAA 600
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      CATGCAGGAGGCCTAGACATGAGGAAGCATGGATCCACTAGAAAAGACGGAAAACTGTTA 660
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      GATGCCAAGACTGAAAGGCGATTGGCTCAGAACAGAGAAGCTGCAAGAAAGAGCAGGCTG 720
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      AGGAAAAAGGCTTATGTGCAGCAACTTGAGACTAGCCGCATAAGGCTTCAGCAAATCGAG 780
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      CAAGAGCTTCAGAGAGCACGCTCACAGGGCTTGTTTCCTGGAGGATGCAGTGCACCTGGA 840
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      GATATGAGCTCGGGTGCTGTAATGTTTGACATGGATTACACCCGATGGATAGACGACGAC 900
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      AGCAAATGCATGGCAGAGCTCCAGGGCGCGCTACAGGCCCAGCTCCCCGACGGAAACCTT 960
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      GGTGCCATTGTGGAAGAATGCATGCGCCACTACGACGAGCTCTTCCACCTTAGGGCCGTG 1020
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      CTCGCCAGCTCCGACGTGTTCCACCTGATGACTGGCATGTGGGCGGCGCCGGCCGAGCGG 1080
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      TGCTTCCTCTGGATGGCCGGTTTCCGGCCATCAGAAATTCTCAAAATGCTGATACCTCAG 1140
consensus_8410#1      ------------------------------------------------------------
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      CTCGATCCACTGACGGAGCAGCAGCTGATGGGGATGTGCAGCCTGCAGCAGTCGTCGGAG 1200
consensus_8410#1      ----------------------------------TGTGCAGCCTGCAGCCGTTGTCGGAG 26
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      CAGACCGAGGAGGCGCTCGCGCAGGGGCTTCACCAGCTGCACCAGTCACTGGCCGACGCG 1260
consensus_8410#1      CAGACCGAGGAGGCGCTCGCGCAGGGGCTTCCCCAGCTGCACCAGTCCCTGGCCGACGCG 86
consensus_8410#2      ------------------------------------------------------------
                                                                                  

consensus_8410#0      GTGGGCGGCGGTCCTCTCAACGACGGCGCAGATGTTGCCAACTACACCGGCCTCATGGCC 1320
consensus_8410#1      GTGGGCGGCGGTCCTCTCAACGACGGCGCAGATGTTGCCAACTACACCGGCCTCATGGCC 146
consensus_8410#2      ----------------------------------CAGTCATGAACACTGGTTACATACAT 26
                                                          * **   **** **   ***    

consensus_8410#0      CTAGCACTTGGCAGGCTTGAGAACCTCGAGAGCTTTTATCGTCAGGCTGATAATCTGAGG 1380
consensus_8410#1      CTAGCACTTGGCAGGCTTGAGAACCTCGAGAGCTTTTATTGTCAGGCTGATAATTTGAGG 206
consensus_8410#2      GTAAC---TAGGAGGCAGCATAAATGCAGGATATCTTGCAGCTAGGCC-----CCCCACA 78
                       ** *   * * ****   * **   *  **  * **   *  ****          *  

consensus_8410#0      CAGGAAACGTTGCACCACATGCGGCGAATTCTCACAACCAGACAGACAGCTCGGTGTTTT 1440
consensus_8410#1      CCGGAAACGTTGCCCCACCTGCGGCGAATTCTCACAACCAGACAGACAGCTCGGTGTTTT 266
consensus_8410#2      CTGGAAATCTT---CCCTTCATGGCCAATGAGT-CATCTACAGGAGCCATACAGTAACTC 134
                      * *****  **   **      *** ***     ** * * *    *    * **   * 

consensus_8410#0      CTTTCCATTGGAGAGTATAATCGCCGTCTCCGTGCTCTCAGCTCCCTCTGGGCTTCACGT 1500
consensus_8410#1      CTTTCCCTTGGAGAGTATAATTGCCGTTTCCGTGCTCTCAGCTCCCTTTGGGCTTCACGT 326
consensus_8410#2      GCAGTCAGTAGGGAGCACCACTGAC-TCTAGCTCAGCTCAGAACACAATG----TCACAG 189
                           *  * * *** *  *  * * * *   *   *****  * *  **    ****  

consensus_8410#0      CCTCGCGAAAACTTCATTGCGACAGAGAATGTCAGCCCTA--CAGGAACTG-AATTTCAG 1557
consensus_8410#1      CCTCGCGAAAACTTCATTGCGACAGAGAATGTCAGCCCTT--CAGGAACTG-AATTTCAG 383
consensus_8410#2      GCCGAGTTGGTGTCCCCAGCGAGCATGAGGTCCGACTCTGGGCAGGAACAGCAACAACAG 249
                       *          * *   ****    **    *  * **   ******* * **   ***

consensus_8410#0      GTTATTCAGCAATCTCAGCAAAATCAATTCTCCGGTTTCTGAGACCTCTTCTCCAGGAGG 1617
consensus_8410#1      GTTATTCAGCCATCTCAGCAAAATCAATTTTCCGGTTTTTGAGACCTTTTCTCCAGGAGG 443
consensus_8410#2      G--AGGTATTGATGGTGACCA--TTGATGATTACAACTACAA-ACAAGGACTTGGAGCAG 304
                      *  *   *   **     * *  *  **  *      *   * **     **    *  *

consensus_8410#0      GTACAAATTCTGCATTTCTGCCAGTAGCAAGGTGGAGAGAGAGAGAGAGAGAGAGAG--- 1674
consensus_8410#1      GTACAAATTTTGCATTTTTGCCCGTAGCAAGGTGGAGAGAGA----------GAGAG--- 490
consensus_8410#2      CAATAGCTACTGCACCAA-GCTTTCAGCAACATGCAGGAGGCCTAGACATGAGGAAGCAT 363
                        * *  *  ****     **    *****  ** **   *           *  **   

consensus_8410#0      AGAGCGAATGTAATGTTCT---ATCATTATGATATTGAGA----AAGGAACATCACTAGG 1727
consensus_8410#1      AGAGCGAATGTAATGTTCT---ATCCTTTTGATATTGAGA----AAGGAACCTCCCTAGG 543
consensus_8410#2      GGATCCACTAGAAAAGACGGAAAACTGTTAGATGCCAAGACTGAAAGGCGATTGGCTCAG 423
                       ** * * *  **    *    * *  *  ***    ***    ****    *  **  *

consensus_8410#0      AAAAAAAAAGATGGCAGAAAGTTGGAAACTGGGGCGGCTCGATCACTTGCTATGTTCCAA 1787
consensus_8410#1      AAAAAAAAAAATGGCAGAAAGTTGGAAACTGGGGCGGCTCGATCCCCTGCTATGTTCCAA 603
consensus_8410#2      AACAGAGAAGCTGCAAGAAAGA-GCAGGCTGAGGAAAAAGGCTTATGTGCAGCAACTTGA 482
                      ** * * **  **  ******  * *  *** **      * *    ***         *

consensus_8410#0      TGGCTCTTGAATTGAATGAAGGGTTAGCTCTAAGCAAAAA---------- 1827
consensus_8410#1      TGGCTCTTGAATTGAATGAAGGGTTAGCTTTAAGAAAAAAAAAAAAAAAA 653
consensus_8410#2      -GACT----AGCCGCATAAGGCTTCAGCAAATCGAGCAAGAGCTT----- 522
                       * **    *   * ** * *  * ***     *   **           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)