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Oryza sativa
cluster # 8437 cluster # 8437       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8437#0 length = 2915 sequences # 2  
consensus_8437#1 length = 1729 sequences # 3  

consensusID : consensus_8437#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2915
fasta sequence
                              [CGCCTCGGCCCCTTCCCCGTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGACGACGACGAGGTCTACCCTCCGCTGACCACGATGATGAAGGACAAGATGAAGGATCTCACGAGGAAGGTCACCTCCGCCTCCTCCTCCTCCTCATCCTCCTCCTCCAAGGGCACCGCCCACATCCTCGGCTCCGGCCCCGACCTCTCCTCCTCCCGCACCTCAAACCCTAGCCCTAGTCGCCCCGCTGCCCCCCAGGCGAGAGGCCGCCGTCCTCCGGCTCCGGCTCATCTCCACCTCCTCCCGCCGCGCCAGCGCCACCACCGACCCTCCCGCGTCGGGGGAGGGGAACGACGACGCCGCCGTCGCGTGCCCCAGCTGCGCAGAGCCGTTCCCCTCCGAGCTGGCGGTGTCTGACCACCTCGACGGCTGCCTCGCGGCGGCAGGGGGAGCCCGGCCCCGCTCAGCCGCGTACCTGGCCGGCTGGCCGGCGATGCCCCCGCGTCCGCTGTGGAGGTGGTGAAGAGGCTGCTCGGGAACCTGCTCTCCGATCCCCGGAACGACAAGTACAGGAAGGTCAGGCTCGGGAACCCGAGGATCAAGGAGGCCGTGGCGGACAGGGAGTGCGGGGTGGATCTCCTCGAGGCCGTGGGGTTCAGGGTCGCCGACAAGGGCGGGGAGCTCTTCGCCGTCATGGACGAGGTGCCCGGAGACGCGAGGCTCGGCTGGATCAGGCAAGCCGTGCTCCTGCTCCAGAGGGCCCGGCCTTCAACGCCGCCGCCGAAGCAGGCAGATGCCAAGGGGACTCGCCCGGATGGAGTTGGCGAACAGCAGGGGGTTAAGAGGCCGGTTGATCACCAGATTCGGGTGTTCTTCTCTGTTGCTGCAAGTTCTGTTGCAGAAAATGATCTACCAGATTATTTCTATAGCCTTAGTAATGAGGAGATAAGGAATGAGGCAAAGATGAGGAGGGGGAGGCTAGAACAATCTTGGTTGCTGATTCCAAAGTCATATAAGGAGAAGCAGGCACTGGCTGCCCGACAGAAGTATAAACAAGCTCTGATTCGTATTCCGTTTCCTGATGGAGTAATTCTACAGGGTGTGTTCCTTCCCACAGAGCCCATTAGTTCCCTATATGAGGTATCTTAACTCCCTTGCCTTATCTTCAACGCGTTTTCTCATTTTGGTTTGCTTAGTACCTTCTTTGACCCTGTCAATTCAGCATATATTGATGGCTTAATCTTTGGTATCATTGAAGCAAATCTTGGCACGTACACTTAGCATCTACTTTTCAATTTTTACTATTTATTAGTTGCAATTGCCATGCTCAATTAAAGAGTAGTTAACCTGGTAGCATTTGTAGAACTGGCCTACCAATGAAAGCAGTGCATGAGTCATGATAAGTCTAAAGTATCAATTGTTTGAGTTCAGACTTCAGAGGGGATATCCAGTAGATACACAGAATTTGTTCTTTTTATCTTGGATTGCTCTTATCCTCAAGAGTAACACGTGACAAAATACAGGATTAAGTGTTAGTCTTGTCTCAAAACGATTTTCCCTGGTAGAAGATAGTTATGAAGTTAGACGGTGTCCTGGTTTTAACCCTGAACACTACATAATCTATTCACACAAGATCTCGAGATTTTTTTTTCTGACAATTGAGCCCATCCTATTCAGAGTACAGATAAATGGCTAAGATAAGTTCACTGACCTTATTGTTTCCACTGTTCCACAAGCCCCAGCGCTATAGATGTCCTTAATGCTGCTGTGAAAATGAACAGAATACATGGGTGCCAATTAAACATCACCTAATAACACATTGGCTAGCCTCCAAGTCATGTATCGACAGTGGATTCACATGCCATTGGATGGATCTCTGTGTGTATTTGTCAGTGCTTGTCTTGGCATAGAAACAAGTCTTTCCTCGCGCAAATGCTCCTGATGCATGACGCTCAGCACTGTACTTCTTAATCCTTATTAGCAGTATTACAGCTTCAGGGTTGATACGAGTAACCTTCAGCGGTATTAGCACACGACTGTATAAGGTACAGTACAATATACTGAATGGATAGCCTCATTATACATGTTTATTCTAGCTATCAATTTCCATTGTGCATCTCGCATATAGCATTTCTTTATTTGTTCATGTGCTTTATCTGTGTTTTTTTATTACTTGTGCTACTCATTTTTTTTCTCTCCACAGTCCTAAAGTGGTATCCATGCCATTTACTGGTTTTGTGGCACTTGGCTTATTTGTTATTTTCGTAATGTAGTTTGCCGCATCTGCTTTGAAGCAGCCAAGTTTGGAATTCGATCTTATCTGTCCAGCTGGTCCTAGGACACGTGTCACACCTCCTTTTCCACAACCAGGGGAGCGGGCACACACACTGCTGGATGAAGACCTAGTCCCTTCTGCTCGGCTTACCTTCAAGCCTAAATAGACTGATTCGGTTGTGTTCACTGGTCTGTTGGACGAGCTTCTTGAGGCCAGCGAGCCG-TTTACATCT-GCATCCTCATGAACTGTGAATACTGCCGGCAATTATTTCGTGGCTGCTGACTTCCATTGTGTAAAACAGATATCCGAATGCTCTGT-TACATGGCTGTAATTTGACACAGGGCTATTGAAGGCTGGATACCTGATATGTGATACATGTAATTGCTTGGCAATTGCCAAATGCCAAACCATACGGTAGAAGAGGCCAGCAATTCATCAGGCCTAGGTCTACATTCTTCTGTAACTTGTGCGATGAGTAGGATCTGCTATGTACAAAAACAACAGATGGAAACCATCTCTTAGTTTCATGTTCGCTGTTGTGATTCTCAATATAGCTACTCCTATCAAATCAATATACTGTTCTGGCAATATAGCTACTCCTGTCAAATCAATATACTGTTCTGGTCTGACATAAAAAAAAAA]

[+] EMBL AK065417             [CGCCTCGGCCCCTTCCCCGTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGACGACGACGAGGTCTACCCTCCGCTGACCACGATGATGAAGGACAAGATGAAGGATCTCACGAGGAAGGTCACCTCCGCCTCCTCCTCCTCCTCATCCTCCTCCTCCAAGGGCACCGCCCACATCCTCGGCTCCGGCCCCGACCTCTCCTCCTCCCGCACCTCAAACCCTAGCCCTAGTCGCCCCGCTGCCCCCCAGGCGAGAGGCCGCCGTCCTCCGGCTCCGGCTCATCTCCACCTCCTCCCGCCGCGCCAGCGCCACCACCGACCCTCCCGCGTCGGGGGAGGGGAACGACGACGCCGCCGTCGCGTGCCCCAGCTGCGCAGAGCCGTTCCCCTCCGAGCTGGCGGTGTCTGACCACCTCGACGGCTGCCTCGCGGCGGCAGGGGGAGCCCGGCCCCGCTCAGCCGCGTACCTGGCCGGCTGGCCGGCGATGCCCCCGCGTCCGCTGTGGAGGTGGTGAAGAGGCTGCTCGGGAACCTGCTCTCCGATCCCCGGAACGACAAGTACAGGAAGGTCAGGCTCGGGAACCCGAGGATCAAGGAGGCCGTGGCGGACAGGGAGTGCGGGGTGGATCTCCTCGAGGCCGTGGGGTTCAGGGTCGCCGACAAGGGCGGGGAGCTCTTCGCCGTCATGGACGAGGTGCCCGGAGACGCGAGGCTCGGCTGGATCAGGCAAGCCGTGCTCCTGCTCCAGAGGGCCCGGCCTTCAACGCCGCCGCCGAAGCAGGCAGATGCCAAGGGGACTCGCCCGGATGGAGTTGGCGAACAGCAGGGGGTTAAGAGGCCGGTTGATCACCAGATTCGGGTGTTCTTCTCTGTTGCTGCAAGTTCTGTTGCAGAAAATGATCTACCAGATTATTTCTATAGCCTTAGTAATGAGGAGATAAGGAATGAGGCAAAGATGAGGAGGGGGAGGCTAGAACAATCTTGGTTGCTGATTCCAAAGTCATATAAGGAGAAGCAGGCACTGGCTGCCCGACAGAAGTATAAACAAGCTCTGATTCGTATTCCGTTTCCTGATGGAGTAATTCTACAGGGTGTGTTCCTTCCCACAGAGCCCATTAGTTCCCTATATGAGGTATCTTAACTCCCTTGCCTTATCTTCAACGCGTTTTCTCATTTTGGTTTGCTTAGTACCTTCTTTGACCCTGTCAATTCAGCATATATTGATGGCTTAATCTTTGGTATCATTGAAGCAAATCTTGGCACGTACACTTAGCATCTACTTTTCAATTTTTACTATTTATTAGTTGCAATTGCCATGCTCAATTAAAGAGTAGTTAACCTGGTAGCATTTGTAGAACTGGCCTACCAATGAAAGCAGTGCATGAGTCATGATAAGTCTAAAGTATCAATTGTTTGAGTTCAGACTTCAGAGGGGATATCCAGTAGATACACAGAATTTGTTCTTTTTATCTTGGATTGCTCTTATCCTCAAGAGTAACACGTGACAAAATACAGGATTAAGTGTTAGTCTTGTCTCAAAACGATTTTCCCTGGTAGAAGATAGTTATGAAGTTAGACGGTGTCCTGGTTTTAACCCTGAACACTACATAATCTATTCACACAAGATCTCGAGATTTTTTTTTCTGACAATTGAGCCCATCCTATTCAGAGTACAGATAAATGGCTAAGATAAGTTCACTGACCTTATTGTTTCCACTGTTCCACAAGCCCCAGCGCTATAGATGTCCTTAATGCTGCTGTGAAAATGAACAGAATACATGGGTGCCAATTAAACATCACCTAATAACACATTGGCTAGCCTCCAAGTCATGTATCGACAGTGGATTCACATGCCATTGGATGGATCTCTGTGTGTATTTGTCAGTGCTTGTCTTGGCATAGAAACAAGTCTTTCCTCGCGCAAATGCTCCTGATGCATGACGCTCAGCACTGTACTTCTTAATCCTTATTAGCAGTATTACAGCTTCAGGGTTGATACGAGTAACCTTCAGCGGTATTAGCACACGACTGTATAAGGTACAGTACAATATACTGAATGGATAGCCTCATTATACATGTTTATTCTAGCTATCAATTTCCATTGTGCATCTCGCATATAGCATTTCTTTATTTGTTCATGTGCTTTATCTGTGTTTTTTTATTACTTGTGCTACTCATTTTTTTTCTCTCCACAGTCCTAAAGTGGTATCCATGCCATTTACTGGTTTTGTGGCACTTGGCTTATTTGTTATTTTCGTAATGTAGTTTGCCGCATCTGCTTTGAAGCAGCCAAGTTTGGAATTCGATCTTATCTGTCCAGCTGGTCCTAGGACACGTGTCACACCTCCTTTTCCACAACCAGGGGAGCGGGCACACACACTGCTGGATGAAGACCTAGTCCCTTCTGCTCGGCTTACCTTCAAGCCTAAATAGACTGATTCGGTTGTGTTCACTGGTCTGTTGGACGAGCTTCTTGAGGCCAGCGAGCCG TTTACATCT GCATCCTCATGAACTGTGAATACTGCCGGCAATTATTTCGTGGCTGCTGACTTCCATTGTGTAAAACAGATATCCGAATGCTCTGT TACATGGCTGTAATTTGACACAGGGCTATTGAAGGCTGGATACCTGATATGTGATACATGTAATTGCTTGGCAATTGCCAAATGCCAAACCATACGGTAGAAGAGGCCAGCAATTCATCAGGCCTAGGTCTACATTCTTCTGTAACTTGTGCGATGAGTAGGATCTGCTATGTACAAAAACAACAGATGGAAACCATCTCTTAGTTTCATGTTCGCTGTTGTGATTCTCAATATAGC                                                                                       ]
[+] EMBL BI813218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     tTTCACTGGTCT TTGGACGAGCTTC TGA GCCAGCGA CCGTTTTACATCTGGCATCCTCATG ACTGTGAATACTGCCGGCAATTATTTCGTGGCTGCTGACTTCCCTTGTGTAAAACAGATATCCGAATGCTCTGTGTACATGGCTGTAATTTGACACAGGGCTATTGAAGGCTGGATACCTGATATGTGATACATGTAATTGCTTGGC ATTGCC AATGCC AACCATACGGTAGAAGAGGCCAGCAATTCATCAGGCCTAGGTCTACATTCTTCTGTAACTTGTGCGATGAGTAGGATCTGCTATGTACCAAAAC ACAGATGGAAACCATCTCTTAGTTTCATGTTCGCTGTTGTGATTCTCAATATAGCTACTCCTATCAAATCAATATACTGTTCTGGCAATATAGCTACTCCTGTCAAATCAATATACTGTTCTGGTCTGACATAAAAAAAAAA]


>consensus_8437#0 CGCCTCGGCCCCTTCCCCGTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGA CGACGACGAGGTCTACCCTCCGCTGACCACGATGATGAAGGACAAGATGAAGGATCTCAC GAGGAAGGTCACCTCCGCCTCCTCCTCCTCCTCATCCTCCTCCTCCAAGGGCACCGCCCA CATCCTCGGCTCCGGCCCCGACCTCTCCTCCTCCCGCACCTCAAACCCTAGCCCTAGTCG CCCCGCTGCCCCCCAGGCGAGAGGCCGCCGTCCTCCGGCTCCGGCTCATCTCCACCTCCT CCCGCCGCGCCAGCGCCACCACCGACCCTCCCGCGTCGGGGGAGGGGAACGACGACGCCG CCGTCGCGTGCCCCAGCTGCGCAGAGCCGTTCCCCTCCGAGCTGGCGGTGTCTGACCACC TCGACGGCTGCCTCGCGGCGGCAGGGGGAGCCCGGCCCCGCTCAGCCGCGTACCTGGCCG GCTGGCCGGCGATGCCCCCGCGTCCGCTGTGGAGGTGGTGAAGAGGCTGCTCGGGAACCT GCTCTCCGATCCCCGGAACGACAAGTACAGGAAGGTCAGGCTCGGGAACCCGAGGATCAA GGAGGCCGTGGCGGACAGGGAGTGCGGGGTGGATCTCCTCGAGGCCGTGGGGTTCAGGGT CGCCGACAAGGGCGGGGAGCTCTTCGCCGTCATGGACGAGGTGCCCGGAGACGCGAGGCT CGGCTGGATCAGGCAAGCCGTGCTCCTGCTCCAGAGGGCCCGGCCTTCAACGCCGCCGCC GAAGCAGGCAGATGCCAAGGGGACTCGCCCGGATGGAGTTGGCGAACAGCAGGGGGTTAA GAGGCCGGTTGATCACCAGATTCGGGTGTTCTTCTCTGTTGCTGCAAGTTCTGTTGCAGA AAATGATCTACCAGATTATTTCTATAGCCTTAGTAATGAGGAGATAAGGAATGAGGCAAA GATGAGGAGGGGGAGGCTAGAACAATCTTGGTTGCTGATTCCAAAGTCATATAAGGAGAA GCAGGCACTGGCTGCCCGACAGAAGTATAAACAAGCTCTGATTCGTATTCCGTTTCCTGA TGGAGTAATTCTACAGGGTGTGTTCCTTCCCACAGAGCCCATTAGTTCCCTATATGAGGT ATCTTAACTCCCTTGCCTTATCTTCAACGCGTTTTCTCATTTTGGTTTGCTTAGTACCTT CTTTGACCCTGTCAATTCAGCATATATTGATGGCTTAATCTTTGGTATCATTGAAGCAAA TCTTGGCACGTACACTTAGCATCTACTTTTCAATTTTTACTATTTATTAGTTGCAATTGC CATGCTCAATTAAAGAGTAGTTAACCTGGTAGCATTTGTAGAACTGGCCTACCAATGAAA GCAGTGCATGAGTCATGATAAGTCTAAAGTATCAATTGTTTGAGTTCAGACTTCAGAGGG GATATCCAGTAGATACACAGAATTTGTTCTTTTTATCTTGGATTGCTCTTATCCTCAAGA GTAACACGTGACAAAATACAGGATTAAGTGTTAGTCTTGTCTCAAAACGATTTTCCCTGG TAGAAGATAGTTATGAAGTTAGACGGTGTCCTGGTTTTAACCCTGAACACTACATAATCT ATTCACACAAGATCTCGAGATTTTTTTTTCTGACAATTGAGCCCATCCTATTCAGAGTAC AGATAAATGGCTAAGATAAGTTCACTGACCTTATTGTTTCCACTGTTCCACAAGCCCCAG CGCTATAGATGTCCTTAATGCTGCTGTGAAAATGAACAGAATACATGGGTGCCAATTAAA CATCACCTAATAACACATTGGCTAGCCTCCAAGTCATGTATCGACAGTGGATTCACATGC CATTGGATGGATCTCTGTGTGTATTTGTCAGTGCTTGTCTTGGCATAGAAACAAGTCTTT CCTCGCGCAAATGCTCCTGATGCATGACGCTCAGCACTGTACTTCTTAATCCTTATTAGC AGTATTACAGCTTCAGGGTTGATACGAGTAACCTTCAGCGGTATTAGCACACGACTGTAT AAGGTACAGTACAATATACTGAATGGATAGCCTCATTATACATGTTTATTCTAGCTATCA ATTTCCATTGTGCATCTCGCATATAGCATTTCTTTATTTGTTCATGTGCTTTATCTGTGT TTTTTTATTACTTGTGCTACTCATTTTTTTTCTCTCCACAGTCCTAAAGTGGTATCCATG CCATTTACTGGTTTTGTGGCACTTGGCTTATTTGTTATTTTCGTAATGTAGTTTGCCGCA TCTGCTTTGAAGCAGCCAAGTTTGGAATTCGATCTTATCTGTCCAGCTGGTCCTAGGACA CGTGTCACACCTCCTTTTCCACAACCAGGGGAGCGGGCACACACACTGCTGGATGAAGAC CTAGTCCCTTCTGCTCGGCTTACCTTCAAGCCTAAATAGACTGATTCGGTTGTGTTCACT GGTCTGTTGGACGAGCTTCTTGAGGCCAGCGAGCCGTTTACATCTGCATCCTCATGAACT GTGAATACTGCCGGCAATTATTTCGTGGCTGCTGACTTCCATTGTGTAAAACAGATATCC GAATGCTCTGTTACATGGCTGTAATTTGACACAGGGCTATTGAAGGCTGGATACCTGATA TGTGATACATGTAATTGCTTGGCAATTGCCAAATGCCAAACCATACGGTAGAAGAGGCCA GCAATTCATCAGGCCTAGGTCTACATTCTTCTGTAACTTGTGCGATGAGTAGGATCTGCT ATGTACAAAAACAACAGATGGAAACCATCTCTTAGTTTCATGTTCGCTGTTGTGATTCTC AATATAGCTACTCCTATCAAATCAATATACTGTTCTGGCAATATAGCTACTCCTGTCAAA TCAATATACTGTTCTGGTCTGACATAAAAAAAAAA



consensusID : consensus_8437#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1729
fasta sequence
                              [CCCTTGTTTGCTTCGCCTCGGCCCCTTCCCCGTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGACGACGACGAGGTCTACCCTCCGCTGACCACGATGATGAAGGACAAGATGAAGGATCTCACGAGGAAGGTCACCTCCGCCTCCTCCTCCTCCTCATCCTCCTCCTCCAAGGGCACCGCCCACATCCTCGGCTCCGGCCCCGACCTCTCCTCCTCCCGCACCTCAAACCCTAGCCCTAGTCGCCCCGCTGCCCCCCAGGCGAGAGGCCGCCGTCCTCCGGCTCCGGCTCATCTCCACCTCCTCCCGCCGCGCCAGCGCCACCACCGACCCTCCCGCGTCGGGGGAGGGGAACGACGACGCCGCCGTCGCGTGCCCCAGCTGCGCAGAGCCGTTCCCCTCCGAGCTGGCGGTGTCTGACCACCTCGACGGCTGCCTCGCGGCGGCAGGGGGAGCCCGGCCCCGCTCAGCCGCGTACCTGGCCGGCTGGCCGGCGATGCCCCCGCGTCCGCTGTGGAGGTGGTGAAGAGGCTGCTCGGGAACCTGCTCTCCGATCCCCGGAACGACAAGTACAGGAAGGTCAGGCTCGGGAACCCGAGGATCAAGGAGGCCGTGGCGGACAGGGAGTGCGGGGTGGATCTCCTCGAGGCCGTGGGGTTCAGGGTCGCCGACAAGGGCGGGGAGCTCTTCGCCGTCATGGACGAGGTGCCCGGAGACGCGAGGCTCGGCTGGATCAGGCAAGCCGTGCTCCTGCTCCAGAGGGCCCGGCCTTCAACGCCGCCGCCGAAGCAGGCAGATGCCAAGGGGACTCGCCCGGATGGAGTTGGCGAACAGCAGGGGGTTAAGAGGCCGGTTGATCACCAGATTCGGGTGTTCTTCTCTGTTGCTGCAAGTTCTGTTGCAGAAAATGATCTACCAGATTATTTCTATAGCCTTAGTAATGAGGAGATAAGGAATGAGGCAAAGATGAGGAGGGGGAGGCTAGAACAATCTTGGTTGCTGATTCCAAAGTCATATAAGGAGAAGCAGGCACTGGCTGCCCGACAGAAGTATAAACAAGCTCTGATTCGTATTCCGTTTCCTGATGGAGTAATTCTACAGGGTGTGTTCCTTCCCACAGAGCCCATTAGTTCCCTATATGAGTTTGCCGCATCTGCTTTGAAGCAGCCAAGTTTGGAATTCGATCTTATCTGTCCAGCTGGTCCTAGGACACGTGTCACACCTCCTTTTCCACAACCAGGGGAGCGGGCACACACACTGCTGGATGAAGACCTAGTCCCTTCTGCTCGGCTTACCTTCAAGCCTAAATAGACTGATTCGGTTGTGTTCACTGGTCTGTTGGACGAGCTTCTTGAGGCCAGCGAGCCGTTTACATCTGCATCCTCATGAACTGTGAATACTGCCGGCAATTATTTCGTGGCTGCTGACTTCCATTGTGTAAAACAGATATCCGAATGCTCTGTTACATGGCTGTAATTTGACACAGGGCTATTGAAGGCTGGATACCTGATATGTGATACATGTAATTGCTTGGCAATTGCCAAATGCCAAACCATACGGTAGAAGAGGCCAGCAATTCATCAGGCCTAGGTCTACATTCTTCTGTAACTTGTGCGATGAGTAGGATCTGCTATGTACAAAAACAACAGATGGAAACCATCTCTTAGTTTCATGTTCGCTGTTGTGATTCTCAATATAGCTACTCCTATCAAATCAATATA]

[+] EMBL AK069223             [CCCTTGTTTGCTTCGCCTCGGCCCCTTCCCCGTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGACGACGACGAGGTCTACCCTCCGCTGACCACGATGATGAAGGACAAGATGAAGGATCTCACGAGGAAGGTCACCTCCGCCTCCTCCTCCTCCTCATCCTCCTCCTCCAAGGGCACCGCCCACATCCTCGGCTCCGGCCCCGACCTCTCCTCCTCCCGCACCTCAAACCCTAGCCCTAGTCGCCCCGCTGCCCCCCAGGCGAGAGGCCGCCGTCCTCCGGCTCCGGCTCATCTCCACCTCCTCCCGCCGCGCCAGCGCCACCACCGACCCTCCCGCGTCGGGGGAGGGGAACGACGACGCCGCCGTCGCGTGCCCCAGCTGCGCAGAGCCGTTCCCCTCCGAGCTGGCGGTGTCTGACCACCTCGACGGCTGCCTCGCGGCGGCAGGGGGAGCCCGGCCCCGCTCAGCCGCGTACCTGGCCGGCTGGCCGGCGATGCCCCCGCGTCCGCTGTGGAGGTGGTGAAGAGGCTGCTCGGGAACCTGCTCTCCGATCCCCGGAACGACAAGTACAGGAAGGTCAGGCTCGGGAACCCGAGGATCAAGGAGGCCGTGGCGGACAGGGAGTGCGGGGTGGATCTCCTCGAGGCCGTGGGGTTCAGGGTCGCCGACAAGGGCGGGGAGCTCTTCGCCGTCATGGACGAGGTGCCCGGAGACGCGAGGCTCGGCTGGATCAGGCAAGCCGTGCTCCTGCTCCAGAGGGCCCGGCCTTCAACGCCGCCGCCGAAGCAGGCAGATGCCAAGGGGACTCGCCCGGATGGAGTTGGCGAACAGCAGGGGGTTAAGAGGCCGGTTGATCACCAGATTCGGGTGTTCTTCTCTGTTGCTGCAAGTTCTGTTGCAGAAAATGATCTACCAGATTATTTCTATAGCCTTAGTAATGAGGAGATAAGGAATGAGGCAAAGATGAGGAGGGGGAGGCTAGAACAATCTTGGTTGCTGATTCCAAAGTCATATAAGGAGAAGCAGGCACTGGCTGCCCGACAGAAGTATAAACAAGCTCTGATTCGTATTCCGTTTCCTGATGGAGTAATTCTACAGGGTGTGTTCCTTCCCACAGAGCCCATTAGTTCCCTATATGAGTTTGCCGCATCTGCTTTGAAGCAGCCAAGTTTGGAATTCGATCTTATCTGTCCAGCTGGTCCTAGGACACGTGTCACACCTCCTTTTCCACAACCAGGGGAGCGGGCACACACACTGCTGGATGAAGACCTAGTCCCTTCTGCTCGGCTTACCTTCAAGCCTAAATAGACTGATTCGGTTGTGTTCACTGGTCTGTTGGACGAGCTTCTTGAGGCCAGCGAGCCGTTTACATCTGCATCCTCATGAACTGTGAATACTGCCGGCAATTATTTCGTGGCTGCTGACTTCCATTGTGTAAAACAGATATCCGAATGCTCTGTTACATGGCTGTAATTTGACACAGGGCTATTGAAGGCTGGATACCTGATATGTGATACATGTAATTGCTTGGCAATTGCCAAATGCCAAACCATACGGTAGAAGAGGCCAGCAATTCATCAGGCCTAGGTCTACATTCTTCTGTAACTTGTGCGATGAGTAGGATCTGCTATGTACAAAAACAACAGATGGAAACCATCTCTTAGTTTCATGTTCGCTGTTGTGATTCTCAATATAGCTACTCCTATCAAATCAATATA]
[+] EMBL CA758425             [                                                                                                                                                                                                                                                                                                                                                                               ACGCCGCCGTCGCGTGCCCCAGCTGCGCAGAGCCGTTCCCCTCCGAGCTGGCGGTGTCTGACCACCTCGACGGCTGCCTCGCGGCGGCAGGGGGAGCCCGGCCCCGCTCAGCCGCGTACCTGGCCAGCTGGCCGGCGATGCCCCCGCGTCCGCTGTGGAGGTGGTGAAGAGGCTGCTCGGGAACCTGCTCTCCGATCCCCGGAACGACAAGTACAGGAAGGTCAGGCTCGGGAACCCGAGGATCAAGGAGTCCGTGGCGGACAGGGAGTGCGGGGTGGATCTCCTCGAGGCCGTGGGGTTCAGGGTCGCCGACAAGGGCGGGGAGCTCTTCGCCGTCATGGACGAGGTGCCCGGAGACGCGAGGCTCGGCTGGATCAGGCAAGCCGTGCTCCTGCTCCAGAGGGCCCGGCCTTCGACGCCGCCGCCGAAGCAGGCAGATGCCAAGGGGACTCGCCCGGATGGAGTTGGCGAACAGCAGGGGGTTAAGAGGCCGGTTGATCACCAGATTCGGGTGTTCTTCTCTGNTGCTGCAAGTTCTGTTGCANAAAATGATCTACCAGATTATTTCTATAGCCTTAGTAATGAGGAGGTAAGGAATGAGGCAAAGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF317251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGGAAACCATCTCTTAGTTTCATGTTCGCTGTTGTGATTCTCAATATAGCTACTCCTATCAAATCAAaaa ]


>consensus_8437#1 CCCTTGTTTGCTTCGCCTCGGCCCCTTCCCCGTCCTCCTCCTCCTCCTCCTCCTCCGCCG CCGCCGCCGCCGACGACGACGAGGTCTACCCTCCGCTGACCACGATGATGAAGGACAAGA TGAAGGATCTCACGAGGAAGGTCACCTCCGCCTCCTCCTCCTCCTCATCCTCCTCCTCCA AGGGCACCGCCCACATCCTCGGCTCCGGCCCCGACCTCTCCTCCTCCCGCACCTCAAACC CTAGCCCTAGTCGCCCCGCTGCCCCCCAGGCGAGAGGCCGCCGTCCTCCGGCTCCGGCTC ATCTCCACCTCCTCCCGCCGCGCCAGCGCCACCACCGACCCTCCCGCGTCGGGGGAGGGG AACGACGACGCCGCCGTCGCGTGCCCCAGCTGCGCAGAGCCGTTCCCCTCCGAGCTGGCG GTGTCTGACCACCTCGACGGCTGCCTCGCGGCGGCAGGGGGAGCCCGGCCCCGCTCAGCC GCGTACCTGGCCGGCTGGCCGGCGATGCCCCCGCGTCCGCTGTGGAGGTGGTGAAGAGGC TGCTCGGGAACCTGCTCTCCGATCCCCGGAACGACAAGTACAGGAAGGTCAGGCTCGGGA ACCCGAGGATCAAGGAGGCCGTGGCGGACAGGGAGTGCGGGGTGGATCTCCTCGAGGCCG TGGGGTTCAGGGTCGCCGACAAGGGCGGGGAGCTCTTCGCCGTCATGGACGAGGTGCCCG GAGACGCGAGGCTCGGCTGGATCAGGCAAGCCGTGCTCCTGCTCCAGAGGGCCCGGCCTT CAACGCCGCCGCCGAAGCAGGCAGATGCCAAGGGGACTCGCCCGGATGGAGTTGGCGAAC AGCAGGGGGTTAAGAGGCCGGTTGATCACCAGATTCGGGTGTTCTTCTCTGTTGCTGCAA GTTCTGTTGCAGAAAATGATCTACCAGATTATTTCTATAGCCTTAGTAATGAGGAGATAA GGAATGAGGCAAAGATGAGGAGGGGGAGGCTAGAACAATCTTGGTTGCTGATTCCAAAGT CATATAAGGAGAAGCAGGCACTGGCTGCCCGACAGAAGTATAAACAAGCTCTGATTCGTA TTCCGTTTCCTGATGGAGTAATTCTACAGGGTGTGTTCCTTCCCACAGAGCCCATTAGTT CCCTATATGAGTTTGCCGCATCTGCTTTGAAGCAGCCAAGTTTGGAATTCGATCTTATCT GTCCAGCTGGTCCTAGGACACGTGTCACACCTCCTTTTCCACAACCAGGGGAGCGGGCAC ACACACTGCTGGATGAAGACCTAGTCCCTTCTGCTCGGCTTACCTTCAAGCCTAAATAGA CTGATTCGGTTGTGTTCACTGGTCTGTTGGACGAGCTTCTTGAGGCCAGCGAGCCGTTTA CATCTGCATCCTCATGAACTGTGAATACTGCCGGCAATTATTTCGTGGCTGCTGACTTCC ATTGTGTAAAACAGATATCCGAATGCTCTGTTACATGGCTGTAATTTGACACAGGGCTAT TGAAGGCTGGATACCTGATATGTGATACATGTAATTGCTTGGCAATTGCCAAATGCCAAA CCATACGGTAGAAGAGGCCAGCAATTCATCAGGCCTAGGTCTACATTCTTCTGTAACTTG TGCGATGAGTAGGATCTGCTATGTACAAAAACAACAGATGGAAACCATCTCTTAGTTTCA TGTTCGCTGTTGTGATTCTCAATATAGCTACTCCTATCAAATCAATATA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8437#0      -------------CGCCTCGGCCCCTTCCCCGTCCTCCTCCTCCTCCTCCTCCTCCGCCG 47
consensus_8437#1      CCCTTGTTTGCTTCGCCTCGGCCCCTTCCCCGTCCTCCTCCTCCTCCTCCTCCTCCGCCG 60
                                   ***********************************************

consensus_8437#0      CCGCCGCCGCCGACGACGACGAGGTCTACCCTCCGCTGACCACGATGATGAAGGACAAGA 107
consensus_8437#1      CCGCCGCCGCCGACGACGACGAGGTCTACCCTCCGCTGACCACGATGATGAAGGACAAGA 120
                      ************************************************************

consensus_8437#0      TGAAGGATCTCACGAGGAAGGTCACCTCCGCCTCCTCCTCCTCCTCATCCTCCTCCTCCA 167
consensus_8437#1      TGAAGGATCTCACGAGGAAGGTCACCTCCGCCTCCTCCTCCTCCTCATCCTCCTCCTCCA 180
                      ************************************************************

consensus_8437#0      AGGGCACCGCCCACATCCTCGGCTCCGGCCCCGACCTCTCCTCCTCCCGCACCTCAAACC 227
consensus_8437#1      AGGGCACCGCCCACATCCTCGGCTCCGGCCCCGACCTCTCCTCCTCCCGCACCTCAAACC 240
                      ************************************************************

consensus_8437#0      CTAGCCCTAGTCGCCCCGCTGCCCCCCAGGCGAGAGGCCGCCGTCCTCCGGCTCCGGCTC 287
consensus_8437#1      CTAGCCCTAGTCGCCCCGCTGCCCCCCAGGCGAGAGGCCGCCGTCCTCCGGCTCCGGCTC 300
                      ************************************************************

consensus_8437#0      ATCTCCACCTCCTCCCGCCGCGCCAGCGCCACCACCGACCCTCCCGCGTCGGGGGAGGGG 347
consensus_8437#1      ATCTCCACCTCCTCCCGCCGCGCCAGCGCCACCACCGACCCTCCCGCGTCGGGGGAGGGG 360
                      ************************************************************

consensus_8437#0      AACGACGACGCCGCCGTCGCGTGCCCCAGCTGCGCAGAGCCGTTCCCCTCCGAGCTGGCG 407
consensus_8437#1      AACGACGACGCCGCCGTCGCGTGCCCCAGCTGCGCAGAGCCGTTCCCCTCCGAGCTGGCG 420
                      ************************************************************

consensus_8437#0      GTGTCTGACCACCTCGACGGCTGCCTCGCGGCGGCAGGGGGAGCCCGGCCCCGCTCAGCC 467
consensus_8437#1      GTGTCTGACCACCTCGACGGCTGCCTCGCGGCGGCAGGGGGAGCCCGGCCCCGCTCAGCC 480
                      ************************************************************

consensus_8437#0      GCGTACCTGGCCGGCTGGCCGGCGATGCCCCCGCGTCCGCTGTGGAGGTGGTGAAGAGGC 527
consensus_8437#1      GCGTACCTGGCCGGCTGGCCGGCGATGCCCCCGCGTCCGCTGTGGAGGTGGTGAAGAGGC 540
                      ************************************************************

consensus_8437#0      TGCTCGGGAACCTGCTCTCCGATCCCCGGAACGACAAGTACAGGAAGGTCAGGCTCGGGA 587
consensus_8437#1      TGCTCGGGAACCTGCTCTCCGATCCCCGGAACGACAAGTACAGGAAGGTCAGGCTCGGGA 600
                      ************************************************************

consensus_8437#0      ACCCGAGGATCAAGGAGGCCGTGGCGGACAGGGAGTGCGGGGTGGATCTCCTCGAGGCCG 647
consensus_8437#1      ACCCGAGGATCAAGGAGGCCGTGGCGGACAGGGAGTGCGGGGTGGATCTCCTCGAGGCCG 660
                      ************************************************************

consensus_8437#0      TGGGGTTCAGGGTCGCCGACAAGGGCGGGGAGCTCTTCGCCGTCATGGACGAGGTGCCCG 707
consensus_8437#1      TGGGGTTCAGGGTCGCCGACAAGGGCGGGGAGCTCTTCGCCGTCATGGACGAGGTGCCCG 720
                      ************************************************************

consensus_8437#0      GAGACGCGAGGCTCGGCTGGATCAGGCAAGCCGTGCTCCTGCTCCAGAGGGCCCGGCCTT 767
consensus_8437#1      GAGACGCGAGGCTCGGCTGGATCAGGCAAGCCGTGCTCCTGCTCCAGAGGGCCCGGCCTT 780
                      ************************************************************

consensus_8437#0      CAACGCCGCCGCCGAAGCAGGCAGATGCCAAGGGGACTCGCCCGGATGGAGTTGGCGAAC 827
consensus_8437#1      CAACGCCGCCGCCGAAGCAGGCAGATGCCAAGGGGACTCGCCCGGATGGAGTTGGCGAAC 840
                      ************************************************************

consensus_8437#0      AGCAGGGGGTTAAGAGGCCGGTTGATCACCAGATTCGGGTGTTCTTCTCTGTTGCTGCAA 887
consensus_8437#1      AGCAGGGGGTTAAGAGGCCGGTTGATCACCAGATTCGGGTGTTCTTCTCTGTTGCTGCAA 900
                      ************************************************************

consensus_8437#0      GTTCTGTTGCAGAAAATGATCTACCAGATTATTTCTATAGCCTTAGTAATGAGGAGATAA 947
consensus_8437#1      GTTCTGTTGCAGAAAATGATCTACCAGATTATTTCTATAGCCTTAGTAATGAGGAGATAA 960
                      ************************************************************

consensus_8437#0      GGAATGAGGCAAAGATGAGGAGGGGGAGGCTAGAACAATCTTGGTTGCTGATTCCAAAGT 1007
consensus_8437#1      GGAATGAGGCAAAGATGAGGAGGGGGAGGCTAGAACAATCTTGGTTGCTGATTCCAAAGT 1020
                      ************************************************************

consensus_8437#0      CATATAAGGAGAAGCAGGCACTGGCTGCCCGACAGAAGTATAAACAAGCTCTGATTCGTA 1067
consensus_8437#1      CATATAAGGAGAAGCAGGCACTGGCTGCCCGACAGAAGTATAAACAAGCTCTGATTCGTA 1080
                      ************************************************************

consensus_8437#0      TTCCGTTTCCTGATGGAGTAATTCTACAGGGTGTGTTCCTTCCCACAGAGCCCATTAGTT 1127
consensus_8437#1      TTCCGTTTCCTGATGGAGTAATTCTACAGGGTGTGTTCCTTCCCACAGAGCCCATTAGTT 1140
                      ************************************************************

consensus_8437#0      CCCTATATGAGGTATCTTAACTCCCTTGCCTTATCTTCAACGCGTTTTCTCATTTTGGTT 1187
consensus_8437#1      CCCTATATGAG----TTTGCCGCATCTGCTTTGAAGCAGCCAAGTTTG--GAATTCGATC 1194
                      ***********     **  * *   *** **        *  ****    * ** * * 

consensus_8437#0      TGCTTAGTACCTTCTTTGACCCTGTCAATTCAGCATATATTGATGGCTTAATCTTTGGTA 1247
consensus_8437#1      TTATC--TGTCCAGCTGGTCCTAGGACACGTGTCACACCTCCTTTTCCACAACCAGGGGA 1252
                      *  *   *  *    * * **  *   *     ** *  *   *  *   * *   ** *

consensus_8437#0      TCATTGAAGCAAATCTTGGCACGTACACTTAGCATCTACTTTTCAATTTTTACTATTTAT 1307
consensus_8437#1      GCGGGCACACACACTGCTGGATGAAGACCTAGTCCCTTCTGCTCGGCTT-----ACCTTC 1307
                       *    *  ** *     * * * * ** ***   ** **  **   **     *  *  

consensus_8437#0      TAGTTGCAATTGCCATGCTCAATTAAAG--AGTAGTTAACCTGGTAGCATTTGTAGAACT 1365
consensus_8437#1      AAGCCTAAATAGACTGATTCGGTTGTGTTCACTGGTCTGTTGGACGAGCTTCTTGAGGCC 1367
                       **    *** * *    **  **      * * **      *      **  *    * 

consensus_8437#0      GGCCTACCAATGAAAGCAGTGCATGAGTCATGATAAGTCTAAAGTATCAATTGTTTGAGT 1425
consensus_8437#1      AGCGAGCCGTTTACATC--TGCATCC-TCATGAACTGTGAATACTGCCGGCAATT--ATT 1422
                       **   **  * * * *  *****   ******   **  * * *  *     **  * *

consensus_8437#0      TCAGACTTCAGAGGGGATATCCAGTAGATACACAGAATTTGTTCTTTTTATCTTGGATTG 1485
consensus_8437#1      TCGTGGCT----GCTGACTTCCATTGTGTAAAACAGATATCCGAATGCTCTGTTACATGG 1478
                      **     *    *  **  **** *   ** *    ** *     *  * * **  ** *

consensus_8437#0      CTCTTATCCTCAAGAGTAACACGTGACAAAATACAGGATTAAGTGTTAGTCTTGTCTCAA 1545
consensus_8437#1      CTGTAATT--------TGACACAGGGCTA--TTGAAGGCTGGATACCTGATATGTGATAC 1528
                      ** * **         * ****  * * *  *  * *  *   *    *   ***   * 

consensus_8437#0      AACGATTTTCCCTGGTAGAAGATAGTTATGAAGTTAGACGGTGTCCTGGTTTTAACCCTG 1605
consensus_8437#1      A-TGTAATTGCTTGGCAATTGCCAAATGCCAAACCATACGGT------AGAAGAGGCCAG 1581
                      *  *   ** * *** *   *  *  *   **   * *****           *  ** *

consensus_8437#0      AACACTACATAATCTATTCACACAAGATCTCGAGATTTTTTTTTCTGACAATTGAGCCCA 1665
consensus_8437#1      CAATTCATCAGGCCTAGGTCTACATTCTTCTGTAACTTGTG----CGATGAGTAGGATC- 1636
                       *    *      ***     ***   *   *  * ** *      **  * *  *  * 

consensus_8437#0      TCCTATTCAGAGTACAGATAAATGGCTAAGATAAGTTCACTGACCTTATTGTTTCCACTG 1725
consensus_8437#1      TGCTATGTACAAAAACAACAGATGG---AAACCA--TCTCTTAGTTTCATGTT--CGCTG 1689
                      * ****  * *  *   * * ****   * *  *  ** ** *  **  ****  * ***

consensus_8437#0      TTCCACAAGCCCCAGCGCTATAGATGTCCTTAATGCTGCTGTGAAAATGAACAGAATACA 1785
consensus_8437#1      TT--GTGATTCTCAA---TATAGCTACTCCTATCAAATCAATATA--------------- 1729
                      **     *  * **    ***** *   * **      *  *  *               

consensus_8437#0      TGGGTGCCAATTAAACATCACCTAATAACACATTGGCTAGCCTCCAAGTCATGTATCGAC 1845
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      AGTGGATTCACATGCCATTGGATGGATCTCTGTGTGTATTTGTCAGTGCTTGTCTTGGCA 1905
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      TAGAAACAAGTCTTTCCTCGCGCAAATGCTCCTGATGCATGACGCTCAGCACTGTACTTC 1965
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      TTAATCCTTATTAGCAGTATTACAGCTTCAGGGTTGATACGAGTAACCTTCAGCGGTATT 2025
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      AGCACACGACTGTATAAGGTACAGTACAATATACTGAATGGATAGCCTCATTATACATGT 2085
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      TTATTCTAGCTATCAATTTCCATTGTGCATCTCGCATATAGCATTTCTTTATTTGTTCAT 2145
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      GTGCTTTATCTGTGTTTTTTTATTACTTGTGCTACTCATTTTTTTTCTCTCCACAGTCCT 2205
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      AAAGTGGTATCCATGCCATTTACTGGTTTTGTGGCACTTGGCTTATTTGTTATTTTCGTA 2265
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      ATGTAGTTTGCCGCATCTGCTTTGAAGCAGCCAAGTTTGGAATTCGATCTTATCTGTCCA 2325
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      GCTGGTCCTAGGACACGTGTCACACCTCCTTTTCCACAACCAGGGGAGCGGGCACACACA 2385
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      CTGCTGGATGAAGACCTAGTCCCTTCTGCTCGGCTTACCTTCAAGCCTAAATAGACTGAT 2445
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      TCGGTTGTGTTCACTGGTCTGTTGGACGAGCTTCTTGAGGCCAGCGAGCCGTTTACATCT 2505
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      GCATCCTCATGAACTGTGAATACTGCCGGCAATTATTTCGTGGCTGCTGACTTCCATTGT 2565
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      GTAAAACAGATATCCGAATGCTCTGTTACATGGCTGTAATTTGACACAGGGCTATTGAAG 2625
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      GCTGGATACCTGATATGTGATACATGTAATTGCTTGGCAATTGCCAAATGCCAAACCATA 2685
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      CGGTAGAAGAGGCCAGCAATTCATCAGGCCTAGGTCTACATTCTTCTGTAACTTGTGCGA 2745
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      TGAGTAGGATCTGCTATGTACAAAAACAACAGATGGAAACCATCTCTTAGTTTCATGTTC 2805
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      GCTGTTGTGATTCTCAATATAGCTACTCCTATCAAATCAATATACTGTTCTGGCAATATA 2865
consensus_8437#1      ------------------------------------------------------------
                                                                                  

consensus_8437#0      GCTACTCCTGTCAAATCAATATACTGTTCTGGTCTGACATAAAAAAAAAA 2915
consensus_8437#1      --------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)